Observed motif hits of pattern ID: 581 (enumeration index: query1097.1098) of S5

List of motif hits in the counted superfamilies for pattern ID: 581 (enumeration index: query1097.1098) of S5

1.   d.350.1       YcgL-like    
                   YcgL-like beta(2)-alpha-beta-alpha-beta; 3 layers: a/b/a; antiparallel beta-sheet, order:3124
                   2h7a  d2h7aa1  A:14-22,26-32,41-49,50-59,81-87

2.   d.375.1       NE1680-like    
                   NE1680-like beta(2)-alpha-beta-alpha-beta; 2 layers, a/b; antiparallel sheet, order 3124
                   2hfq  d2hfqa1  A:1-12,16-25,28-44,54-63,76-82

3.   d.252.1       CheC-like    
                   CheC-like duplication: tandem repeat of two intertwined alpha-beta-(X)-beta(2) motifs
                   1squ  d1squb_  B:41-51,53-60,61-74,110-122,144-152
                   1xko  d1xkob_  B:41-51,52-61,61-74,110-122,144-154
                   1squ  d1squa_  A:41-51,53-61,61-74,110-122,144-152
                   1xko  d1xkoa_  A:41-51,53-61,61-74,110-122,144-152
                   1squ  d1squb_  B:41-51,53-60,82-108,110-122,144-152
                   1xko  d1xkoa_  A:41-51,53-61,82-105,110-122,144-152
                   1xkr  d1xkra_  A:59-70,72-80,103-130,132-144,180-190
                   2f9z  d2f9za1  A:59-70,72-80,103-130,132-144,180-190
                   1xko  d1xkob_  B:41-51,52-61,82-108,110-122,144-154
                   1squ  d1squa_  A:41-51,53-61,82-108,110-122,144-152
                   2f9z  d2f9zb1  B:59-70,72-80,103-130,132-144,180-190

5.   b.129.1       AbrB/MazE/MraZ-like  members of this superfamily are known or predicted to have DNA-binding function !   
                   Double-split beta-barrel pseudobarrel; capped on both ends by alpha-helices
                   1n0e  d1n0ea_  A:53-61,63-69,69-84,101-106,135-141
                   1n0f  d1n0fc_  C:53-61,63-69,69-84,101-106,135-141
                   1n0f  d1n0ff_  F:53-61,63-69,69-84,101-106,135-141
                   1n0f  d1n0fa_  A:53-61,63-69,69-84,101-106,135-141
                   1n0f  d1n0fd_  D:53-61,63-69,69-84,101-106,135-141
                   1n0f  d1n0fb_  B:53-61,63-69,69-84,101-106,135-141
                   1n0f  d1n0fh_  H:53-61,63-69,69-84,101-106,136-141
                   1n0e  d1n0eh_  H:53-61,63-69,69-84,101-106,136-141
                   1n0g  d1n0gb_  B:53-61,63-69,69-84,101-106,136-141
                   1n0g  d1n0ga_  A:53-61,63-69,69-84,101-106,136-141
                   1n0e  d1n0ed_  D:53-61,63-69,69-84,101-106,136-141
                   1n0e  d1n0ef_  F:53-61,63-69,69-84,101-106,136-141
                   1n0e  d1n0eb_  B:53-61,63-69,69-84,101-106,136-141
                   1n0e  d1n0ee_  E:53-61,63-69,69-84,101-106,136-141
                   1n0e  d1n0ec_  C:53-61,63-69,69-84,101-106,136-141
                   1n0f  d1n0fe_  E:53-61,63-69,69-84,101-106,136-141
                   1n0e  d1n0eg_  G:53-61,63-69,69-84,101-106,136-141
                   1n0f  d1n0fg_  G:53-61,63-69,69-84,102-106,136-141

6.   e.39.1        YebC-like    
                   YebC-like 3 domains: (1) 3-helical bundle; (2 and 3 ) alpha+beta of different folds: domain 3 has a ferredoxin-like fold and is inserted in domain 2
                   1lfp  d1lfpa_  A:82-92,94-104,105-121,121-125,230-238
                   1mw7  d1mw7a_  A:78-88,90-100,101-117,118-122,231-238

9.   d.343.1       MM3350-like    
                   MM3350-like beta(2)-alpha-beta(4); antiparallel beta-sheet; order: 216534; similar to a ubiquitin-like fold with the extra C-terminal strand inserted in the middle of the beta-sheet
                   2i1s  d2i1sa1  A:6-16,22-30,33-46,110-123,130-137
                   2i1s  d2i1sb1  B:6-16,22-30,33-46,110-123,130-137

10.  d.135.1       The spindle assembly checkpoint protein mad2  N- and C-termini undergo large conformational rearrangement upon ligand binding !   
                   The spindle assembly checkpoint protein mad2 core: alpha(2)-beta(2)-alpha-beta; mixed sheet: order 213
                   1go4  d1go4a_  A:80-92,93-107,120-142,148-159,190-200
                   1go4  d1go4c_  C:80-92,93-107,120-142,148-159,190-201
                   1go4  d1go4b_  B:80-92,93-107,120-142,148-159,190-201
                   2v64  d2v64f1  F:80-92,93-107,120-142,148-158,190-201
                   2v64  d2v64a1  A:80-92,93-107,120-142,148-158,190-201
                   2v64  d2v64c1  C:80-92,93-107,120-142,148-158,190-201
                   1go4  d1go4d_  D:80-92,93-107,120-143,148-159,190-201
                   1klq  d1klqa_  A:82-93,97-109,122-145,150-160,192-203
                   1s2h  d1s2ha_  A:81-92,93-107,119-143,148-157,190-201