List of the counted superfamily hits for pattern ID: 140 (enumeration index: query1099.1100) of S5

List of the counted superfamily hits for pattern ID: 140 (enumeration index: query1099.1100) of S5

SCOP superfamily ID superfamiily description corresponding fold description
b.7.1C2 domain (Calcium/lipid-binding domain, CaLB) two constituent families are related by circular permutation ! C2 domain-like sandwich; 8 strands in 2 sheets; greek-key
b.1.18E set domains "Early" Ig-like fold families possibly related to the immunoglobulin and/or fibronectin type III superfamilies ! Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.1.4beta-Galactosidase/glucuronidase domain Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.3.5Cna protein B-type domain Prealbumin-like sandwich; 7 strands in 2 sheets, greek-key ! variations: some members have additional 1-2 strands to common fold
b.116.1Viral chemokine binding protein m3 Viral chemokine binding protein m3 consists of two different beta-sandwich domains of partial topological similarity to immunoglobulin-like folds
b.1.2Fibronectin type III Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.1.13Superoxide reductase-like Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.1.9CBD9-like has additional strand at N-terminus; the active site in a similar topological location as the Cu,Zn SOD site ! Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.1.16Lamin A/C globular tail domain Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.82.5TRAP-like shorter variant of double-helix; assembles in large ring-like structures containing from 9 to 11 domains ! Double-stranded beta-helix one turn of helix is made by two pairs of antiparallel strands linked with short turns ! has appearance of a sandwich of distinct architecture and jelly-roll topology
b.1.21Fungal immunomodulatory protein, FIP Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.127.1Baseplate structural protein gp8 Baseplate structural protein gp8 multisheet protein with a mixture of beta-sandwich and beta-barrel features
b.27.1Soluble secreted chemokine inhibitor, VCCI Soluble secreted chemokine inhibitor, VCCI sandwich; 11 strands in 2 sheets; greek-key
b.30.5Galactose mutarotase-like probable carbohydrate-binding domain in enzymes acting on sugars ! Supersandwich sandwich; 18 strands in 2 sheets
b.7.5Smr-associated domain-like C2 domain-like sandwich; 8 strands in 2 sheets; greek-key
b.1.12Purple acid phosphatase, N-terminal domain Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.136.1SspB-like SspB-like core: barrel, open; n*=4, S*=8; meander; SH3-like topology; some similarity to the Sm-like fold
b.1.5Transglutaminase, two C-terminal domains Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.2.4Alpha-macroglobulin receptor domain Common fold of diphtheria toxin/transcription factors/cytochrome f sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold
b.25.1Osmotin, thaumatin-like protein has two smaller insertion domains ! Osmotin, thaumatin-like protein sandwich; 11 strands in 2 sheets
e.52.1NAD kinase/diacylglycerol kinase-like NAD kinase/diacylglycerol kinase-like 2 domains: d1 [alpha/beta; related to the PFK N-terminal domain (scop_sf 53784)]; d2 [all-beta; atypical beta-sandwich made of 4 structural repeats of beta(3) unit]
d.219.1PP2C-like contain binuclear metal (Mn) centre ! PP2C-like 4 layers: alpha/beta/beta/alpha; antiparallel beta sheets
b.6.1Cupredoxins contains copper-binding site ! Cupredoxin-like sandwich; 7 strands in 2 sheets, greek-key ! variations: some members have additional 1-2 strands
b.7.2Periplasmic chaperone C-domain C2 domain-like sandwich; 8 strands in 2 sheets; greek-key
b.2.1Diphtheria toxin, C-terminal domain Common fold of diphtheria toxin/transcription factors/cytochrome f sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold
b.2.5p53-like transcription factors Common fold of diphtheria toxin/transcription factors/cytochrome f sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold
b.1.15Integrin domains Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
e.65.1VPA0735-like VPA0735-like consists of a cluster of helices and two beta-sandwich domains of similar topology; probable duplication
b.1.8Cu,Zn superoxide dismutase-like has additional strand at N-terminus ! Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.123.1Hypothetical protein TM1070 Hypothetical protein TM1070 sandwich; 8 strands in 2 sheets; jelly-roll
b.1.20Tp47 lipoprotein, middle and C-terminal domains Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.166.1MAL13P1.257-like MAL13P1.257-like complex fold; duplication: consists of two intertwinned structural repeats related by pseudo dyad
f.9.1Perfringolysin Perfringolysin 2 domains: (1) alpha+beta; (2) all-beta, similar to the CalB domain fold but the two last strands are transposed
b.1.7Actinoxanthin-like Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.26.1SMAD/FHA domain has a few short helices inserted in loops ! SMAD/FHA domain sandwich; 11 strands in 2 sheets; greek-key
b.2.6Cytochrome f, large domain Common fold of diphtheria toxin/transcription factors/cytochrome f sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold
b.130.1Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), peptide-binding domain beta-sandwich: 8 strands in 2 sheets
b.1.3PKD domain Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.1.11PapD-like contains PP switch between strands D and C' ! Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.1.22ASF1-like contains extra C-terminal strand ! Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.1.23ApaG-like Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.2.8beta-sandwich domain of Sec23/24 Common fold of diphtheria toxin/transcription factors/cytochrome f sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold
b.1.19Antigen MPT63/MPB63 (immunoprotective extracellular protein) Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.3.3VHL Prealbumin-like sandwich; 7 strands in 2 sheets, greek-key ! variations: some members have additional 1-2 strands to common fold
b.1.14Invasin/intimin cell-adhesion fragments Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
d.303.1BB1717-like BB1717-like complex fold with a bifurcated beta-sheet structure surrounded by helices; contains beta-sheet barrel, closed (n=5, S=8)
b.3.2Carboxypeptidase regulatory domain-like Prealbumin-like sandwich; 7 strands in 2 sheets, greek-key ! variations: some members have additional 1-2 strands to common fold
b.69.1Galactose oxidase, central domain 7-bladed beta-propeller consists of seven 4-stranded beta-sheet motifs; meander
b.121.6Group I dsDNA viruses Nucleoplasmin-like/VP (viral coat and capsid proteins) sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands ! characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
b.20.1ENV polyprotein, receptor-binding domain ENV polyprotein, receptor-binding domain sandwich; 9 strands in 2 sheets; greek-key; contains a few helices in loop regions
b.2.9Peptidylarginine deiminase Pad4, middle domain Common fold of diphtheria toxin/transcription factors/cytochrome f sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold
b.3.7Hypothetical protein PA1324 Prealbumin-like sandwich; 7 strands in 2 sheets, greek-key ! variations: some members have additional 1-2 strands to common fold
b.1.27CalX-like Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.2.7Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor duplication: one domain of this fold is inserted into another domain of the same fold ! Common fold of diphtheria toxin/transcription factors/cytochrome f sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold
b.1.25LEA14-like Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.86.1Hedgehog/intein (Hint) domain duplication: contains two intertwined structural repeats ! Hedgehog/intein (Hint) domain complex fold made of five beta-hairpin units and a b-ribbon arc
b.30.2Amine oxidase catalytic domain Supersandwich sandwich; 18 strands in 2 sheets
b.1.17Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
e.35.1Membrane penetration protein mu1 Membrane penetration protein mu1 4 domains: three intertwined predominately alpha domains and one jelly-roll beta-sandwich
f.6.1Leukocidin-like Leukocidin-like subunit fold contains beta-sandwich of Ig-like (grerk-key) topology and a beta-ribbon arm that forms an oligomeric transmembrane barrel