List of the counted superfamily hits for pattern ID: 141 (enumeration index: query1106) of S5

List of the counted superfamily hits for pattern ID: 141 (enumeration index: query1106) of S5

SCOP superfamily ID superfamiily description corresponding fold description
d.219.1PP2C-like contain binuclear metal (Mn) centre ! PP2C-like 4 layers: alpha/beta/beta/alpha; antiparallel beta sheets
b.1.1Immunoglobulin Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.116.1Viral chemokine binding protein m3 Viral chemokine binding protein m3 consists of two different beta-sandwich domains of partial topological similarity to immunoglobulin-like folds
b.1.2Fibronectin type III Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.1.14Invasin/intimin cell-adhesion fragments Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.133.1Dextranase, N-terminal domain Dextranase, N-terminal domain sandwich; 9 strands in 2 sheets; greek-key
b.26.1SMAD/FHA domain has a few short helices inserted in loops ! SMAD/FHA domain sandwich; 11 strands in 2 sheets; greek-key
b.1.7Actinoxanthin-like Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.7.1C2 domain (Calcium/lipid-binding domain, CaLB) two constituent families are related by circular permutation ! C2 domain-like sandwich; 8 strands in 2 sheets; greek-key
d.157.1Metallo-hydrolase/oxidoreductase Metallo-hydrolase/oxidoreductase duplication of beta(4)-alpha-beta-alpha motif; 4 layers a/b/b/a; mixed beta-sheets
b.1.18E set domains "Early" Ig-like fold families possibly related to the immunoglobulin and/or fibronectin type III superfamilies ! Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.1.5Transglutaminase, two C-terminal domains Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.1.3PKD domain Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.166.1MAL13P1.257-like MAL13P1.257-like complex fold; duplication: consists of two intertwinned structural repeats related by pseudo dyad
b.176.1AttH-like AttH-like duplication: two flattened beta-barrels of lipocalin-like topology are orthogonally packed with a pseudo twofold symmetry
b.7.4Rab geranylgeranyltransferase alpha-subunit, insert domain C2 domain-like sandwich; 8 strands in 2 sheets; greek-key
b.1.4beta-Galactosidase/glucuronidase domain Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.1.8Cu,Zn superoxide dismutase-like has additional strand at N-terminus ! Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.1.12Purple acid phosphatase, N-terminal domain Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.1.11PapD-like contains PP switch between strands D and C' ! Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.28.1Baculovirus p35 protein has a few helices inserted in loops ! Baculovirus p35 protein sandwich; 14 strands in 2 sheets; greek-key
b.2.1Diphtheria toxin, C-terminal domain Common fold of diphtheria toxin/transcription factors/cytochrome f sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold
b.163.1Bacteriophage trimeric proteins domain found in phage proteins that form trimers, but is not involved in the trimerisation ! Pseudo beta-prism beta-sandwich with one regular beta-sheet and the other beta-sheet bent in the middle with a set of aligned beta-bulges
b.2.5p53-like transcription factors Common fold of diphtheria toxin/transcription factors/cytochrome f sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold
f.6.1Leukocidin-like Leukocidin-like subunit fold contains beta-sandwich of Ig-like (grerk-key) topology and a beta-ribbon arm that forms an oligomeric transmembrane barrel
d.160.1Carbon-nitrogen hydrolase Carbon-nitrogen hydrolase 4 layers: alpha/beta/beta/alpha; mixed beta sheets; contains duplication
b.1.21Fungal immunomodulatory protein, FIP Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.2.6Cytochrome f, large domain Common fold of diphtheria toxin/transcription factors/cytochrome f sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold
b.1.17Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.1.13Superoxide reductase-like Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.1.22ASF1-like contains extra C-terminal strand ! Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
f.12.1Head and neck region of the ectodomain of NDV fusion glycoprotein Head and neck region of the ectodomain of NDV fusion glycoprotein 3 intertwined all-beta domains
f.11.1Anthrax protective antigen Anthrax protective antigen 4 domains; I (res. 14-225) and II (226-487) are beta-sandwiches of similar gamma-crystallin like topologies; III (488-594) has a beta-grasp like fold; IV (595-735) has an Ig-like fold
b.2.8beta-sandwich domain of Sec23/24 Common fold of diphtheria toxin/transcription factors/cytochrome f sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold
b.1.23ApaG-like Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
d.152.1Aldehyde ferredoxin oxidoreductase, N-terminal domain Aldehyde ferredoxin oxidoreductase, N-terminal domain contains sandwich; duplication of alpha+beta motif with single mixed sheet ! motif: beta(2)-alpha-beta(3)-alpha-beta; strand order 216345, strands 1 and 6 are parallel
b.96.1Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like sandwich; 8 strands in 2 sheets; greek-key: partial topological similarity to immunoglobulin-like folds
e.69.1Poly(A) polymerase catalytic subunit-like Central domain d2 is distantly related to the nucleotidyltransferase superfamily (scop_sf 81301)Poly(A) polymerase catalytic subunit-like 3 domains; d1: all-alpha, contains HhH motif; d2: alpha+beta of nucleotidyltransferase fold (scop_cf 81302); d3: [alpha+beta; beta(3)-alpha-beta(3)-alpha(2); 3 layers: a/b/a; mixed beta-sheet of 6 strands, order 123654, strands 2 and 5 are antiparallel to the rest
b.7.3PHL pollen allergen C2 domain-like sandwich; 8 strands in 2 sheets; greek-key
d.332.1RGC domain-like RGC domain-like consists of two beta-sheets and four helices eclosing a cental cavity