1. d.141.1 Ribosomal protein L6 Ribosomal protein L6 consists of two beta-sheets and one alpha-helix packed around single core 2hgq d2hgqh1 H:7-11,15-21,41-47,48-54,58-82 2hgj d2hgjh1 H:7-11,15-21,40-47,48-55,58-82 2qao d2qaog2 G:83-89,111-116,119-126,128-133,136-152 2hgu d2hguh1 H:7-11,15-21,40-47,48-55,58-82 2qam d2qamg2 G:83-89,111-116,119-126,128-133,136-152 2z4l d2z4lg2 G:81-89,111-116,119-126,128-135,136-152 2z4n d2z4ng2 G:81-89,111-116,119-126,128-135,136-152 1vq6 d1vq6e1 E:1-7,11-17,38-44,45-51,55-79 1vq7 d1vq7e1 E:1-7,11-17,38-44,45-51,55-79 1q86 d1q86g1 G:1-7,11-17,38-44,45-51,55-79 1qvg d1qvge1 E:1-7,11-17,38-44,45-51,55-79 1vq5 d1vq5e1 E:1-7,11-17,38-44,45-51,55-79 2otj d2otje1 E:1-7,11-17,38-44,45-51,55-79 1yjn d1yjne1 E:1-7,11-17,38-44,45-51,55-79 2qbg d2qbgg2 G:81-90,112-116,119-126,128-135,136-152 2qbe d2qbeg2 G:81-90,112-116,119-126,128-135,136-152 1m90 d1m90g1 G:1-7,11-17,38-44,45-51,55-79 1vq9 d1vq9e1 E:1-7,11-17,38-44,45-51,55-79 1n8r d1n8rg1 G:1-7,11-17,38-44,45-51,55-79 1kqs d1kqse1 E:1-7,11-17,38-44,45-51,55-79 1yjw d1yjwe1 E:1-7,11-17,38-44,45-51,55-79 1nji d1njig1 G:1-7,11-17,38-44,45-51,55-79 1qvf d1qvfe1 E:1-7,11-17,38-44,45-51,55-79 1q82 d1q82g1 G:1-7,11-17,38-44,45-51,55-79 1k8a d1k8ag1 G:1-7,11-17,38-44,45-51,55-79 1yi2 d1yi2e1 E:1-7,11-17,38-44,45-51,55-79 1kc8 d1kc8g1 G:1-7,11-17,38-44,45-51,55-79 1vq4 d1vq4e1 E:1-7,11-17,38-44,45-51,55-79 1s72 d1s72e1 E:1-7,11-17,38-44,45-51,55-79 1jj2 d1jj2e1 E:1-7,11-17,38-44,45-51,55-79 1yj9 d1yj9e1 E:1-7,11-17,38-44,45-51,55-79 1vqk d1vqke1 E:1-7,11-17,38-44,45-51,55-79 1m1k d1m1kg1 G:1-7,11-17,38-44,45-51,55-79 1kd1 d1kd1g1 G:1-7,11-17,38-44,45-51,55-79 1k9m d1k9mg1 G:1-7,11-17,38-44,45-51,55-79 1k73 d1k73g1 G:1-7,11-17,38-44,45-51,55-79 1vqp d1vqpe1 E:1-7,11-17,38-44,45-51,55-79 1vqn d1vqne1 E:1-7,11-17,38-44,45-51,55-79 1vql d1vqle1 E:1-7,11-17,38-44,45-51,55-79 1yit d1yite1 E:1-7,11-17,38-44,45-51,55-79 1q81 d1q81g1 G:1-7,11-17,38-44,45-51,55-79 1yij d1yije1 E:1-7,11-17,38-44,45-51,55-79 2otl d2otle1 E:1-7,11-17,38-44,45-51,55-79 2qp1 d2qp1g2 G:81-88,111-116,119-126,128-135,136-152 1ffk d1ffk11 1:1-7,11-17,38-44,45-51,55-79 2qoz d2qozg2 G:81-88,111-116,119-126,128-135,136-152 1vq8 d1vq8e1 E:1-7,11-17,38-44,45-51,55-79 1vqo d1vqoe1 E:1-7,11-17,38-44,45-51,55-79 1vqm d1vqme1 E:1-7,11-17,38-44,45-51,55-79 1yhq d1yhqe1 E:1-7,11-17,38-44,45-51,55-79 1q7y d1q7yg1 G:1-7,11-17,38-44,45-51,55-79 3dll d3dlle1 E:85-90,112-117,122-127,129-134,137-153 1yl3 d1yl3h2 H:81-90,111-115,119-125,128-135,136-152 2j03 d2j03h2 H:82-90,112-117,121-126,129-136,137-153 2j01 d2j01h2 H:82-90,112-117,121-126,129-136,137-153 2b9n d2b9nh2 H:81-90,111-115,119-125,128-135,136-152 2b9p d2b9ph2 H:81-90,111-115,119-125,128-135,136-152 2b66 d2b66h2 H:81-90,111-115,119-125,128-135,136-152 2qp1 d2qp1g2 G:81-88,94-99,119-126,128-135,136-152 2qoz d2qozg2 G:81-88,94-99,119-126,128-135,136-152 2i2v d2i2vg2 G:81-89,111-116,119-125,128-135,136-152 3df4 d3df4g2 G:81-90,111-116,119-126,128-135,136-152 2i2t d2i2tg2 G:81-89,111-116,119-125,128-135,136-152 3df2 d3df2g2 G:81-90,111-116,119-126,128-135,136-152 2vhn d2vhng2 G:81-90,111-116,119-126,128-135,136-152 2aw4 d2aw4g2 G:81-89,111-116,120-126,128-135,136-152 3bbx d3bbxg2 G:81-89,111-116,120-126,128-135,136-152 2rdo d2rdog2 G:81-89,111-116,120-126,128-135,136-152 1yjn d1yjne2 E:79-88,113-118,122-128,129-136,137-153 1yit d1yite2 E:79-88,113-118,122-128,129-136,137-153 2j28 d2j28g2 G:81-90,111-116,119-125,128-135,136-152 2awb d2awbg2 G:81-90,111-116,119-125,128-135,136-152 1vq9 d1vq9e2 E:79-88,113-118,122-128,129-136,137-153 2qox d2qoxg2 G:81-90,111-116,119-126,128-135,136-152 2cql d2cqla1 A:7-12,16-22,43-50,52-59,63-87 2qov d2qovg2 G:81-90,111-116,119-126,128-135,136-152 1vq7 d1vq7e2 E:79-88,113-118,122-128,129-136,137-153 1vqo d1vqoe2 E:79-88,113-118,122-128,129-136,137-153 1yij d1yije2 E:79-88,113-118,122-128,129-136,137-153 2qbk d2qbkg2 G:81-90,111-116,119-126,128-135,136-152 1vq6 d1vq6e2 E:79-88,113-118,122-128,129-136,137-153 1yjw d1yjwe2 E:79-88,113-118,122-128,129-136,137-153 1vq5 d1vq5e2 E:79-88,113-118,122-128,129-136,137-153 1vq8 d1vq8e2 E:79-88,113-118,122-128,129-136,137-153 2otj d2otje2 E:79-88,113-118,122-128,129-136,137-153 2qbi d2qbig2 G:81-90,111-116,119-126,128-135,136-152 1vqk d1vqke2 E:79-88,113-118,122-128,129-136,137-153 1kqs d1kqse2 E:79-88,113-118,122-128,129-136,137-153 1yhq d1yhqe2 E:79-88,113-118,122-128,129-136,137-153 1q86 d1q86g2 G:79-88,113-118,122-128,129-136,137-153 1ffk d1ffk12 1:79-88,113-118,122-128,129-136,137-153 1vql d1vqle2 E:79-88,113-118,122-128,129-136,137-153 1yi2 d1yi2e2 E:79-88,113-118,122-128,129-136,137-153 1vq4 d1vq4e2 E:79-88,113-118,122-128,129-136,137-153 1n8r d1n8rg2 G:79-88,113-118,122-128,129-136,137-153 1vs8 d1vs8g2 G:81-90,111-116,119-125,128-135,136-152 1rl6 d1rl6a2 A:81-90,111-115,120-125,128-135,136-152 3df4 d3df4g2 G:81-90,94-99,119-126,128-135,136-152 1m90 d1m90g2 G:79-88,113-118,122-128,129-136,137-153 1k8a d1k8ag2 G:79-88,113-118,122-128,129-136,137-153 3df2 d3df2g2 G:81-90,94-99,119-126,128-135,136-152 1q82 d1q82g2 G:79-88,113-118,122-128,129-136,137-153 1kc8 d1kc8g2 G:79-88,113-118,122-128,129-136,137-153 1s72 d1s72e2 E:79-88,113-118,122-128,129-136,137-153 1vqp d1vqpe2 E:79-88,113-118,122-128,129-136,137-153 1vqm d1vqme2 E:79-88,113-118,122-128,129-136,137-153 1nji d1njig2 G:79-88,113-118,122-128,129-136,137-153 2vhm d2vhmg2 G:81-90,111-116,120-126,128-135,136-152 1jj2 d1jj2e2 E:79-88,113-118,122-128,129-136,137-153 1yj9 d1yj9e2 E:79-88,113-118,122-128,129-136,137-153 1m1k d1m1kg2 G:79-88,113-118,122-128,129-136,137-153 2qba d2qbag2 G:82-90,111-116,119-126,128-135,136-152 2qbc d2qbcg2 G:82-90,111-116,119-126,128-135,136-152 1qvf d1qvfe2 E:79-88,113-118,122-128,129-136,137-153 1kd1 d1kd1g2 G:79-88,113-118,122-128,129-136,137-153 1k73 d1k73g2 G:79-88,113-118,122-128,129-136,137-153 1vqn d1vqne2 E:79-88,113-118,122-128,129-136,137-153 1vq8 d1vq8e2 E:79-88,93-99,122-128,129-136,137-153 2otl d2otle2 E:79-88,113-118,122-128,129-136,137-153 1vqm d1vqme2 E:79-88,93-99,122-128,129-136,137-153 1k9m d1k9mg2 G:79-88,113-118,122-128,129-136,137-153 1vqn d1vqne2 E:79-88,93-99,122-128,129-136,137-153 1vqp d1vqpe2 E:79-88,93-99,122-128,129-136,137-153 1qvg d1qvge2 E:79-88,113-118,122-128,129-136,137-153 1q7y d1q7yg2 G:79-88,113-118,122-128,129-136,137-153 1q81 d1q81g2 G:79-88,113-118,122-128,129-136,137-153 1vq9 d1vq9e2 E:79-88,93-99,122-128,129-136,137-153 1vqk d1vqke2 E:79-88,93-99,122-128,129-136,137-153 1vql d1vqle2 E:79-88,93-99,122-128,129-136,137-153 3cf5 d3cf5e1 E:85-91,112-117,121-126,129-135,137-153 1s72 d1s72e2 E:79-88,93-99,122-128,129-136,137-153 1yit d1yite2 E:79-88,93-99,122-128,129-136,137-153 1yhq d1yhqe2 E:79-88,93-99,122-128,129-136,137-153 1jj2 d1jj2e2 E:79-88,93-99,122-128,129-136,137-153 1ffk d1ffk12 1:79-88,93-99,122-128,129-136,137-153 1vqo d1vqoe2 E:79-88,93-99,122-128,129-136,137-153 1k8a d1k8ag2 G:79-88,93-99,122-128,129-136,137-153 1k9m d1k9mg2 G:79-88,93-99,122-128,129-136,137-153 1m1k d1m1kg2 G:79-88,93-99,122-128,129-136,137-153 1kc8 d1kc8g2 G:79-88,93-99,122-128,129-136,137-153 1nji d1njig2 G:79-88,93-99,122-128,129-136,137-153 1m90 d1m90g2 G:79-88,93-99,122-128,129-136,137-153 1k73 d1k73g2 G:79-88,93-99,122-128,129-136,137-153 1yij d1yije2 E:79-88,93-99,122-128,129-136,137-153 1n8r d1n8rg2 G:79-88,93-99,122-128,129-136,137-153 1qvf d1qvfe2 E:79-88,93-99,122-128,129-136,137-153 1kqs d1kqse2 E:79-88,93-99,122-128,129-136,137-153 1yjw d1yjwe2 E:79-88,93-99,122-128,129-136,137-153 1kd1 d1kd1g2 G:79-88,93-99,122-128,129-136,137-153 1q82 d1q82g2 G:79-88,93-99,122-128,129-136,137-153 1yjn d1yjne2 E:79-88,93-99,122-128,129-136,137-153 2qao d2qaog2 G:83-89,93-99,119-126,128-133,136-152 1q7y d1q7yg2 G:79-88,93-99,122-128,129-136,137-153 1q86 d1q86g2 G:79-88,93-99,122-128,129-136,137-153 2qam d2qamg2 G:83-89,93-99,119-126,128-133,136-152 1vs6 d1vs6g2 G:81-90,111-116,120-126,128-135,136-152 2otj d2otje2 E:79-88,93-99,122-128,129-136,137-153 1q81 d1q81g2 G:79-88,93-99,122-128,129-136,137-153 1yj9 d1yj9e2 E:79-88,93-99,122-128,129-136,137-153 2v49 d2v49h2 H:83-90,112-117,120-126,129-136,137-153 1yi2 d1yi2e2 E:79-88,93-99,122-128,129-136,137-153 2v47 d2v47h2 H:83-90,112-117,120-126,129-136,137-153 3d5d d3d5dh2 H:82-91,112-117,120-126,129-136,137-153 3d5b d3d5bh2 H:82-91,112-117,120-126,129-136,137-153 2hgj d2hgjh2 H:85-91,113-117,120-126,129-136,137-153 1qvg d1qvge2 E:79-88,93-99,122-128,129-136,137-153 1vq6 d1vq6e2 E:79-88,93-99,122-128,129-136,137-153 1vq4 d1vq4e2 E:79-88,93-99,122-128,129-136,137-153 3bbx d3bbxg2 G:81-89,93-99,120-126,128-135,136-152 2rdo d2rdog2 G:81-89,93-99,120-126,128-135,136-152 2aw4 d2aw4g2 G:81-89,93-99,120-126,128-135,136-152 1vq5 d1vq5e2 E:79-88,93-99,122-128,129-136,137-153 1vq7 d1vq7e2 E:79-88,93-99,122-128,129-136,137-153 2hgu d2hguh2 H:85-91,113-117,120-126,129-136,137-153 2zjr d2zjre1 E:85-91,112-116,121-126,129-135,137-153 2hgq d2hgqh2 H:86-91,113-117,120-126,129-136,137-153 2otl d2otle2 E:79-88,93-99,122-128,129-136,137-153 2zjq d2zjqe1 E:85-91,112-116,121-126,129-135,137-153 1vq9 d1vq9e1 E:1-7,26-33,38-44,45-51,55-79 1s72 d1s72e1 E:1-7,26-33,38-44,45-51,55-79 1m90 d1m90g1 G:1-7,26-33,38-44,45-51,55-79 1vqn d1vqne1 E:1-7,26-33,38-44,45-51,55-79 1vq8 d1vq8e1 E:1-7,26-33,38-44,45-51,55-79 2otj d2otje1 E:1-7,26-33,38-44,45-51,55-79 1vqo d1vqoe1 E:1-7,26-33,38-44,45-51,55-79 1jj2 d1jj2e1 E:1-7,26-33,38-44,45-51,55-79 1q86 d1q86g1 G:1-7,26-33,38-44,45-51,55-79 1vqk d1vqke1 E:1-7,26-33,38-44,45-51,55-79 1yhq d1yhqe1 E:1-7,26-33,38-44,45-51,55-79 1kqs d1kqse1 E:1-7,26-33,38-44,45-51,55-79 1qvf d1qvfe1 E:1-7,26-33,38-44,45-51,55-79 1kc8 d1kc8g1 G:1-7,26-33,38-44,45-51,55-79 1k9m d1k9mg1 G:1-7,26-33,38-44,45-51,55-79 1q82 d1q82g1 G:1-7,26-33,38-44,45-51,55-79 1n8r d1n8rg1 G:1-7,26-33,38-44,45-51,55-79 1vqp d1vqpe1 E:1-7,26-33,38-44,45-51,55-79 1yjw d1yjwe1 E:1-7,26-33,38-44,45-51,55-79 2zjp d2zjpe1 E:85-91,112-116,120-126,129-136,137-153 1vql d1vqle1 E:1-7,26-33,38-44,45-51,55-79 1k73 d1k73g1 G:1-7,26-33,38-44,45-51,55-79 1q7y d1q7yg1 G:1-7,26-33,38-44,45-51,55-79 1nji d1njig1 G:1-7,26-33,38-44,45-51,55-79 1vq4 d1vq4e1 E:1-7,26-33,38-44,45-51,55-79 1yi2 d1yi2e1 E:1-7,26-33,38-44,45-51,55-79 1m1k d1m1kg1 G:1-7,26-33,38-44,45-51,55-79 1yit d1yite1 E:1-7,26-33,38-44,45-51,55-79 1k8a d1k8ag1 G:1-7,26-33,38-44,45-51,55-79 1vq6 d1vq6e1 E:1-7,26-33,38-44,45-51,55-79 1q81 d1q81g1 G:1-7,26-33,38-44,45-51,55-79 1yj9 d1yj9e1 E:1-7,26-33,38-44,45-51,55-79 1yij d1yije1 E:1-7,26-33,38-44,45-51,55-79 1kd1 d1kd1g1 G:1-7,26-33,38-44,45-51,55-79 1ffk d1ffk11 1:1-7,26-33,38-44,45-51,55-79 1vs6 d1vs6g2 G:81-90,93-99,120-126,128-135,136-152 1vq7 d1vq7e1 E:1-7,26-33,38-44,45-51,55-79 2otl d2otle1 E:1-7,26-33,38-44,45-51,55-79 1vqm d1vqme1 E:1-7,26-33,38-44,45-51,55-79 1qvg d1qvge1 E:1-7,26-33,38-44,45-51,55-79 1vq5 d1vq5e1 E:1-7,26-33,38-44,45-51,55-79 1yjn d1yjne1 E:1-7,26-33,38-44,45-51,55-79 2qbe d2qbeg2 G:81-90,93-99,119-126,128-135,136-152 2zjr d2zjre1 E:85-91,94-100,121-126,129-135,137-153 2qbg d2qbgg2 G:81-90,93-99,119-126,128-135,136-152 2qox d2qoxg2 G:81-90,93-99,119-126,128-135,136-152 2qov d2qovg2 G:81-90,93-99,119-126,128-135,136-152 2hgj d2hgjh1 H:7-11,30-37,40-47,48-55,58-82 3cf5 d3cf5e1 E:85-91,94-100,121-126,129-135,137-153 2vhm d2vhmg2 G:81-90,92-99,120-126,128-135,136-152 2zjp d2zjpe1 E:85-91,94-100,120-126,129-136,137-153 2v49 d2v49h2 H:83-90,94-100,120-126,129-136,137-153 2v47 d2v47h2 H:83-90,94-100,120-126,129-136,137-153 1yl3 d1yl3h2 H:81-90,93-99,119-125,128-135,136-152 2hgq d2hgqh2 H:86-91,94-98,120-126,129-136,137-153 5. e.65.1 VPA0735-like VPA0735-like consists of a cluster of helices and two beta-sandwich domains of similar topology; probable duplication 2p3y d2p3yb1 B:108-115,120-129,130-138,185-193,196-208 2p3y d2p3ya1 A:108-115,120-128,131-138,185-193,196-208 7. d.41.1 CO dehydrogenase molybdoprotein N-domain-like alpha/beta-Hammerhead core: beta-BETA-alpha-beta-BETA-beta-alpha; contains a beta-hammerhead motif similar to that in barrel-sandwich hybrids 1rm6 d1rm6a1 A:39-47,55-59,67-74,103-111,112-124 1sb3 d1sb3a1 A:39-47,55-59,67-73,103-111,112-124 1sb3 d1sb3d1 D:39-47,55-59,67-73,103-111,112-124 1t3q d1t3qe1 E:42-50,58-62,70-76,114-122,123-135 1rm6 d1rm6d1 D:39-47,55-59,67-73,103-111,112-124 1t3q d1t3qb1 B:42-50,58-62,70-76,114-122,123-135 1fo4 d1fo4a3 A:602-612,614-622,630-636,661-673,674-685 1vdv d1vdva3 A:602-612,614-622,630-636,661-673,674-685 1v97 d1v97a3 A:602-612,614-622,630-636,661-673,674-685 3b9j d3b9jc1 C:602-612,614-622,630-636,661-673,674-685 1n5x d1n5xb3 B:601-612,614-622,630-636,661-673,674-685 1n5x d1n5xa3 A:601-612,614-622,630-636,661-673,674-685 1ffu d1ffub1 B:46-56,58-66,74-80,109-121,122-134 1ffv d1ffvb1 B:46-56,58-66,74-80,109-121,122-134 1ffv d1ffve1 E:46-56,58-66,74-80,109-121,122-134 1ffu d1ffue1 E:46-56,58-66,74-80,109-121,122-134 1n62 d1n62b1 B:48-59,61-69,77-83,112-124,125-137 1n60 d1n60e1 E:48-59,61-69,77-83,112-124,125-137 1n60 d1n60b1 B:48-59,61-69,77-83,112-124,125-137 1n61 d1n61e1 E:48-59,61-69,77-83,112-124,125-137 1n5w d1n5we1 E:48-59,61-69,77-83,112-124,125-137 1n63 d1n63e1 E:48-59,61-69,77-83,112-124,125-137 1zxi d1zxib1 B:48-59,61-69,77-83,112-124,125-137 1n61 d1n61b1 B:48-59,61-69,77-83,112-124,125-137 1n63 d1n63b1 B:48-59,61-69,77-83,112-124,125-137 1n5w d1n5wb1 B:48-59,61-69,77-83,112-124,125-137