1.   a.4.5         "Winged helix" DNA-binding domain  contains a small beta-sheet (wing) !   
                   DNA/RNA-binding 3-helical bundle core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
                   1t98  d1t98a1  A:21-25,25-42,48-64,69-85,104-113

2.   a.267.1       Topoisomerase V catalytic domain-like    
                   Topoisomerase V catalytic domain-like multihelical; irregular array; contains small amount of beta-structure and a 3-helical bundle with a variant homeofomain-like fold and HTH motif (scop_cf 46688)
                   2csb  d2csba5  A:4-10,12-44,49-70,99-108,109-119

List of motif hits that are not present in SCOP but are found in PDB for pattern ID: 878 (enumeration index: query1149.2158) of S5

3fgx  A:36-43,46-61,60-73,74-89,88-104
3fgx  B:36-43,46-61,60-73,74-89,88-104
3m7g  A:4-10,12-44,45-70,99-108,109-119
3m6k  B:4-11,12-40,49-70,99-108,109-119
3m6k  A:4-10,12-44,49-70,99-108,109-119
2csd  B:4-10,12-44,49-70,99-108,109-119
2csd  A:4-10,12-44,49-70,99-108,109-119
3m7d  A:4-10,12-44,49-70,99-108,109-119
3m6z  A:4-10,12-44,49-70,99-108,109-119
3m6z  B:4-10,12-44,49-70,99-108,109-119
2csb  B:4-10,12-44,49-70,99-108,109-119