List of the counted superfamily hits for pattern ID: 641 (enumeration index: query1234) of S5

List of the counted superfamily hits for pattern ID: 641 (enumeration index: query1234) of S5

SCOP superfamily ID superfamiily description corresponding fold description
c.13.2SpoIIaa-like SpoIIaa-like core: 4 turns of a (beta-alpha)n superhelix
d.157.1Metallo-hydrolase/oxidoreductase Metallo-hydrolase/oxidoreductase duplication of beta(4)-alpha-beta-alpha motif; 4 layers a/b/b/a; mixed beta-sheets
c.14.1ClpP/crotonase ClpP/crotonase core: 4 turns of (beta-beta-alpha)n superhelix
d.108.1Acyl-CoA N-acyltransferases (Nat) Acyl-CoA N-acyltransferases (Nat) 3 layers: a/b/a; contains mixed beta-sheet
c.102.1Cell-division inhibitor MinC, N-terminal domain Cell-division inhibitor MinC, N-terminal domain beta(2)-(alpha-beta)2-beta; 2 layers, a/b; mixed beta-sheet of 5 strands, order 12345; strands 1 & 5 are antiparallel to the rest
c.110.1DTD-like active form is a dimer ! DTD-like beta(2)-(alpha-beta)2-beta(3); 3 layers, a/b/b; some topological similarity to the N-terminal domain of MinC
c.135.1NIF3 (NGG1p interacting factor 3)-like di-iron binding protein ! NIF3 (NGG1p interacting factor 3)-like consist of two intertwined domains; duplication: contains two structural repeats of alpha-beta-(beta-alpha)3 motif with mixed beta-sheet, order: 1432, strand 1 is antiparallel to the rest
c.141.1Glycerate kinase I Glycerate kinase I consists of two different alpha/beta domains; (1) of the Flavodoxin-like fold (scop_cf 52171); (2) similar to the Restriction endonuclease-like fold (scop_cf 52979), inserted into domain 1
c.52.3Eukaryotic RPB5 N-terminal domain Restriction endonuclease-like core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest
d.334.1IlvD/EDD N-terminal domain-like IlvD/EDD N-terminal domain-like contains a large cluster of helices and a mixed beta-sheet of 4 strands; order 2134, strands 3 and 4 are parallel
d.151.1DNase I-like DNase I-like contains beta-sandwich; duplication of alpha+beta motif
c.1.33EAL domain-like variant of the beta/alpha-barrel fold with strand 1 being antiparallel to the rest ! TIM beta/alpha-barrel contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 ! the first seven superfamilies have similar phosphate-binding sites