1. c.94.1 Periplasmic binding protein-like II Similar in architecture to the superfamily I but partly differs in topology ! Periplasmic binding protein-like II consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication ! mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest 1p99 d1p99a_ A:40-46,74-85,88-92,237-244,249-261 1z7n d1z7ne1 E:1-7,50-61,64-69,179-184,191-204 1z7m d1z7me1 E:1-7,50-61,64-69,178-184,191-204 1z7m d1z7mf1 F:1-7,50-61,64-69,178-184,191-205 1z7m d1z7mh1 H:1-7,50-61,64-69,178-184,191-205 1z7m d1z7mg1 G:1-7,50-61,64-69,178-184,191-206 1o64 d1o64b_ B:2-8,45-54,59-64,171-176,183-201 1o63 d1o63b_ B:2-8,45-56,59-64,171-176,183-201 1ve4 d1ve4a1 A:5-12,53-64,67-72,177-182,189-205 1j1n d1j1nb_ B:10-20,53-65,69-75,314-321,325-339 1i69 d1i69a_ A:90-98,128-139,142-148,264-273,278-294 1z7n d1z7ng1 G:1-7,50-61,64-70,178-184,191-206 1i69 d1i69b_ B:1090-1098,1128-1139,1142-1148,1264-1273,1278-1294 1j1n d1j1na_ A:10-20,53-65,69-75,314-321,325-339 1z7n d1z7nf1 F:1-7,50-61,64-70,178-184,191-205 1z7n d1z7nh1 H:1-7,50-61,64-70,178-184,191-205 1usy d1usyh_ H:1-8,45-56,59-64,171-176,183-201 1usy d1usye_ E:1-8,45-56,59-64,171-176,183-201 1i6a d1i6aa_ A:90-98,128-139,142-148,264-273,278-294 1kwh d1kwha_ A:10-20,53-65,69-75,314-321,325-339 1y3n d1y3na1 A:10-20,53-65,69-75,314-321,325-339 1usy d1usyf_ F:1-8,45-56,59-64,171-176,183-202 1y3p d1y3pa1 A:10-20,53-65,69-75,314-321,325-339 1usy d1usyg_ G:1-8,45-56,59-64,171-176,183-202 1o63 d1o63a_ A:2-8,45-56,59-64,171-176,183-204 1xs5 d1xs5a_ A:6-14,43-54,57-63,201-208,213-225 1o64 d1o64a_ A:2-8,45-56,59-64,171-176,183-204 2ypn d2ypna1 A:4-12,60-73,76-82,198-207,209-220 1fck d1fcka2 A:344-351,376-387,390-395,597-602,605-621 1nh7 d1nh7a1 A:1-8,49-60,63-68,179-184,194-212 1h44 d1h44a_ A:5-12,41-52,55-60,253-259,263-279 1eh3 d1eh3a_ A:5-12,41-52,55-60,253-259,263-279 1ah5 d1ah5a1 A:4-12,60-73,76-82,200-207,209-220 2bjj d2bjjx1 X:6-13,42-53,56-61,254-260,264-280 1h45 d1h45a_ A:5-12,41-52,55-60,253-259,263-279 1dsn d1dsna_ A:5-12,41-52,55-60,253-259,263-279 1dtz d1dtza2 A:344-351,376-387,390-395,595-600,603-619 1cb6 d1cb6a2 A:1344-1351,1376-1387,1390-1395,1597-1602,1605-1621 1jnf d1jnfa2 A:341-348,373-384,387-392,582-587,587-606 1vfd d1vfda_ A:5-12,41-52,55-60,253-259,263-279 1sqy d1sqya2 A:344-351,376-387,390-395,597-602,605-621 1h43 d1h43a_ A:5-12,41-52,55-60,253-258,263-279 1fqe d1fqea_ A:4-12,44-55,58-63,249-254,259-275 1lfg d1lfga1 A:5-12,41-52,55-60,253-259,263-279 1b0l d1b0la2 A:344-351,376-387,390-395,597-602,605-621 1iq7 d1iq7a_ A:344-351,376-387,390-395,592-597,600-616 1xc1 d1xc1h_ H:1-8,34-46,52-57,224-234,238-252 1hse d1hsea_ A:5-12,41-52,55-60,253-259,263-279 2onk d2onke1 E:33-41,69-81,85-91,283-290,295-308 1dot d1dota2 A:344-351,376-387,390-395,592-597,600-616 1ryo d1ryoa_ A:4-12,44-55,58-63,249-254,259-275 1fqf d1fqfa_ A:4-12,44-55,58-63,249-255,259-275 2bjj d2bjjx2 X:345-352,377-388,391-396,598-603,606-622 1ovt d1ovta2 A:344-351,376-387,390-395,592-597,597-616 1aov d1aova2 A:344-351,376-387,390-395,592-597,600-616 1lfi d1lfia2 A:344-351,376-387,390-395,597-602,605-621 1jnf d1jnfa1 A:4-12,44-55,58-63,249-255,259-275 1lfi d1lfia1 A:5-12,41-52,55-60,253-258,263-279 1wdn d1wdna_ A:4-11,49-60,63-67,186-190,193-211 1a8f d1a8fa_ A:4-12,44-55,58-64,248-255,259-275 1atg d1atga_ A:2-8,36-47,51-57,191-198,203-216 1ggg d1gggb_ B:5-10,49-60,63-67,186-190,193-211 1lcf d1lcfa2 A:344-351,376-387,390-395,597-602,605-621 2dp8 d2dp8a1 A:344-351,376-387,390-395,595-600,600-619 2dqv d2dqva1 A:344-351,376-387,390-395,595-600,600-619 1r1n d1r1nd_ D:1-8,34-46,52-58,224-234,238-252 1b7z d1b7za2 A:344-351,376-387,390-395,595-600,603-619 3e9x d3e9xa1 A:344-351,376-387,390-395,595-600,600-619 2hca d2hcaa1 A:344-351,376-387,390-395,595-600,600-619 1qjm d1qjma2 A:344-351,376-387,390-395,595-600,603-619 2d3i d2d3ia2 A:344-351,376-387,390-395,592-597,597-616 1bp5 d1bp5b_ B:4-11,44-55,58-63,249-255,259-275 2ds9 d2ds9a1 A:344-351,376-387,390-395,595-600,600-619 2o51 d2o51a1 A:344-351,376-387,390-395,595-600,600-619 1gtk d1gtka1 A:4-11,60-73,76-82,199-207,209-220 2ocu d2ocua1 A:344-351,376-387,390-395,595-600,600-619 1lfh d1lfha2 A:344-351,376-387,390-395,597-602,605-621 3crb d3crba1 A:344-351,376-387,390-395,595-600,600-619 1ggg d1ggga_ A:5-10,49-60,63-67,186-190,193-211 2b65 d2b65a1 A:344-351,376-387,390-395,595-600,600-619 2e1s d2e1sa1 A:344-351,376-387,390-395,595-600,600-619 1blf d1blfa2 A:344-351,376-387,390-395,595-600,600-619 1h76 d1h76a2 A:345-352,377-388,391-396,594-599,599-618 2zmb d2zmba1 A:344-351,376-387,390-395,595-600,600-619 1pda d1pdaa1 A:4-11,60-73,76-82,200-207,209-220 1q1k d1q1ka1 A:6-12,54-65,68-73,193-199,203-226 2nuv d2nuva1 A:344-351,376-387,390-395,595-600,600-619 1bka d1bkaa2 A:344-351,376-387,390-395,597-602,605-621 2dwh d2dwha1 A:344-351,376-387,390-395,595-600,600-619 2dwj d2dwja1 A:344-351,376-387,390-395,595-600,600-619 2fa7 d2fa7a1 A:344-351,376-387,390-395,595-600,600-619 2e0s d2e0sa1 A:344-351,376-387,390-395,595-600,600-619 2dwi d2dwia1 A:344-351,376-387,390-395,595-600,600-619 2dwa d2dwaa1 A:344-351,376-387,390-395,595-600,600-619 1bp5 d1bp5a_ A:4-11,44-55,58-63,249-255,259-275 2r71 d2r71a1 A:344-351,376-387,390-395,595-600,600-619 1jqf d1jqfa_ A:3-12,44-55,58-63,249-254,259-275 2nwj d2nwja1 A:344-351,376-387,390-395,595-600,600-619 1jw1 d1jw1a1 A:4-11,41-52,55-60,253-259,263-279 3cfl d3cfla1 A:344-351,376-387,390-395,595-600,600-619 1vfe d1vfea_ A:5-11,41-52,55-60,253-259,263-279 2o1l d2o1la1 A:344-351,376-387,390-395,595-600,600-619 2fyi d2fyia1 A:92-100,130-141,144-149,267-276,281-293 2p1s d2p1sa1 A:344-351,376-387,390-395,595-600,600-619 1a99 d1a99a_ A:30-37,64-75,80-85,273-284,288-302 1biy d1biya2 A:344-351,376-387,390-395,595-600,601-619 2doj d2doja1 A:344-351,376-387,390-395,595-600,600-619 2dxy d2dxya1 A:344-351,376-387,390-395,595-600,600-619 1ce2 d1ce2a1 A:5-11,41-52,55-60,253-259,263-279 1n76 d1n76a2 A:344-351,376-387,390-396,596-602,605-621 3ci8 d3ci8a1 A:344-351,376-387,390-395,595-600,600-619 1a99 d1a99d_ D:30-37,64-75,80-85,273-284,288-302 1b0l d1b0la1 A:5-11,41-52,55-60,253-258,263-279 1a99 d1a99b_ B:30-37,64-75,80-85,273-284,288-302 2dyx d2dyxa1 A:344-351,376-387,390-395,595-600,600-619 1dtg d1dtga_ A:4-12,44-55,58-64,248-255,259-275 1b3e d1b3ea_ A:4-12,44-55,58-64,248-255,259-275 2ays d2aysa1 A:344-351,376-387,390-395,595-600,600-619 2g93 d2g93a1 A:344-351,376-387,390-395,595-600,600-619 1sdx d1sdx.1 A:344-351,376-387,390-395,595-600,600-619 1oqh d1oqha_ A:3-12,44-55,58-63,249-254,259-275 1ce2 d1ce2a2 A:344-351,376-387,390-395,595-600,600-619 2dsf d2dsfa1 A:344-351,376-387,390-395,595-600,600-619 1blf d1blfa1 A:5-11,41-52,55-60,253-259,263-279 2q8j d2q8ja1 A:344-351,376-387,390-395,595-600,600-619 1tfd d1tfda_ A:6-12,44-55,58-63,249-254,259-275 2qje d2qjea1 A:344-351,376-387,390-395,595-600,600-619 1a99 d1a99c_ C:30-37,64-75,80-85,273-284,288-302 2alu d2alua1 A:344-351,376-387,390-395,595-600,600-619 2h4i d2h4ia1 A:344-351,376-387,390-395,595-600,600-619 2dxr d2dxra1 A:344-351,376-387,390-395,595-600,600-619 1bka d1bkaa1 A:5-11,41-52,55-60,253-258,263-279 2px1 d2px1a1 A:344-351,376-387,390-395,595-600,600-619 1n7w d1n7wa_ A:3-12,44-55,58-63,249-254,259-275 1sqy d1sqya1 A:5-11,41-52,55-60,253-258,263-279 2r9j d2r9ja1 A:344-351,376-387,390-395,595-600,600-619 1i6b d1i6ba2 A:344-350,376-387,390-395,595-600,600-619 1nkx d1nkxa_ A:344-351,376-387,390-395,595-600,600-619 2fyi d2fyid1 D:92-100,130-141,144-149,267-276,281-293 1lfg d1lfga2 A:344-351,376-387,390-395,597-602,605-621 2dvc d2dvca1 A:344-351,376-387,390-395,595-600,600-619 1n7x d1n7xa_ A:3-12,44-55,58-64,248-255,259-275 1ypn d1ypna1 A:4-11,60-73,76-82,199-207,209-220 2fyi d2fyib1 B:92-100,130-141,144-149,267-276,281-293 1h76 d1h76a1 A:4-11,43-54,57-62,253-259,263-279 1b1x d1b1xa1 A:5-11,41-52,55-60,253-259,263-279 1oqg d1oqga_ A:3-12,44-55,58-64,248-254,259-275 1r1n d1r1nc_ C:1-8,34-46,52-57,224-234,238-252 3cr9 d3cr9a1 A:5-11,41-52,55-60,253-259,263-279 1sbp d1sbpa_ A:1-10,44-55,59-65,220-226,235-248 1d3k d1d3ka_ A:3-12,44-55,58-64,248-255,259-275 1r1n d1r1na_ A:1-8,34-46,52-58,224-234,238-252 3cr9 d3cr9a2 A:344-351,376-387,390-395,595-600,600-619 1xc1 d1xc1e_ E:1-8,34-46,52-58,224-234,238-252 1n76 d1n76a1 A:5-11,41-52,55-60,253-258,263-279 1b7z d1b7za1 A:5-11,41-52,55-60,253-259,263-279 2ozz d2ozza1 A:14-20,50-61,64-69,187-194,196-207 1d4n d1d4na_ A:3-12,44-55,58-64,248-254,259-275 1bp5 d1bp5c_ C:4-11,44-55,58-63,249-255,259-275 1f9b d1f9ba1 A:5-11,41-52,55-60,253-259,263-279 1hsl d1hslb_ B:4-11,51-62,65-69,196-200,203-221 1i6q d1i6qa1 A:5-11,41-52,55-60,253-259,263-279 1lct d1lcta_ A:5-11,41-52,55-60,253-259,263-279 1fck d1fcka1 A:5-11,41-52,55-60,253-259,263-279 1qjm d1qjma1 A:5-11,41-52,55-60,253-259,263-279 1o7t d1o7tg_ G:1-8,34-46,52-58,224-234,238-252 1lag d1lage_ E:4-11,51-62,65-69,196-200,203-221 1n84 d1n84a_ A:3-12,44-55,58-64,248-254,259-275 1o7t d1o7ta_ A:1-8,34-46,52-58,224-234,238-252 1xc1 d1xc1c_ C:1-8,34-46,52-57,224-234,238-252 1r1n d1r1nb_ B:1-8,34-46,52-58,224-234,238-252 1xvy d1xvya_ A:3-10,36-48,54-60,224-234,238-252 1r1n d1r1nh_ H:1-8,34-46,52-58,224-234,238-251 1xc1 d1xc1b_ B:1-8,34-46,52-57,224-234,238-252 1bp5 d1bp5d_ D:4-11,44-55,58-63,249-255,259-275 1a8e d1a8ea_ A:3-12,44-55,58-64,248-255,259-275 1xc1 d1xc1d_ D:1-8,34-46,52-58,224-234,238-252 2fyi d2fyic1 C:92-100,130-141,144-149,267-276,281-293 2onr d2onra1 A:32-40,69-81,85-91,283-290,295-308 1n04 d1n04a2 A:344-351,376-387,390-396,591-597,597-616 1nmu d1nmua_ A:5-11,42-54,58-64,259-268,272-286 2onk d2onkj1 J:32-40,69-81,85-91,283-290,295-308 1xc1 d1xc1f_ F:1-8,34-46,52-58,224-234,238-252 2ons d2onsa1 A:32-40,69-81,85-91,283-290,295-308 1dot d1dota1 A:4-12,41-52,55-60,250-255,259-275 1xvx d1xvxa_ A:6-13,39-51,57-63,227-237,241-255 1aov d1aova1 A:4-12,41-52,55-60,250-255,259-275 1o7t d1o7td_ D:1-8,34-46,52-58,224-234,238-252 1iz1 d1iz1q2 Q:90-98,128-139,142-147,265-274,278-292 1lcf d1lcfa1 A:5-11,41-52,55-60,253-259,263-279 1mh3 d1mh3a2 A:6-11,42-54,58-64,259-268,272-286 1r6z d1r6zp2 P:5-10,41-53,57-63,258-267,271-285 1ii5 d1ii5a_ A:5-11,53-64,67-71,191-196,198-215 1o7t d1o7tb_ B:1-8,34-46,52-58,224-234,238-252 1fqc d1fqca_ A:6-11,42-54,58-64,259-268,272-287 1r1n d1r1ni_ I:1-8,34-46,52-58,224-234,238-252 1o7t d1o7tc_ C:1-8,34-46,52-58,224-234,238-252 1r6z d1r6za2 A:5-10,41-53,57-63,258-267,271-285 1aiv d1aiva2 A:344-350,376-387,390-395,592-597,600-616 2r6g d2r6ge1 E:5-11,42-54,58-64,259-268,272-286 1y3q d1y3qa1 A:10-18,53-65,69-75,314-321,325-339 1r6z d1r6zz2 Z:5-10,41-53,57-63,258-267,271-285 1mh4 d1mh4a2 A:6-11,42-54,58-64,259-268,272-286 2hau d2haua1 A:341-347,373-384,387-392,585-590,590-609 1nnf d1nnfa_ A:1-8,34-46,52-58,224-234,238-251 1mdq d1mdqa_ A:5-11,42-54,58-64,259-268,272-286 2hau d2haub1 B:341-347,373-384,387-392,585-590,590-609 1peb d1peba_ A:6-11,42-54,58-64,259-268,272-286 1o7t d1o7ti_ I:1-8,34-46,52-58,224-234,238-252 1ixc d1ixca2 A:89-98,128-139,142-147,265-274,278-293 1f9b d1f9ba2 A:344-351,376-387,390-396,594-600,600-619 1r1n d1r1nf_ F:1-8,34-46,52-58,224-234,238-251 1svx d1svxb_ B:5-11,42-53,58-64,259-268,272-286 1o7t d1o7th_ H:1-8,34-46,52-58,224-233,238-251 1d9v d1d9va_ A:1-8,34-46,52-58,224-234,238-251 1o7t d1o7te_ E:1-8,34-46,52-57,224-234,238-251 1b1x d1b1xa2 A:344-351,376-387,390-396,594-600,600-619 1fqb d1fqba_ A:6-11,42-54,58-64,259-268,272-286 1wod d1woda_ A:3-10,38-49,53-59,194-201,206-218 1fqa d1fqaa_ A:6-11,42-54,58-64,259-268,272-286 1tfa d1tfaa_ A:5-12,41-52,55-60,250-255,257-275 1qvs d1qvsa_ A:1-8,34-46,52-58,224-234,238-251 1jw4 d1jw4a_ A:6-11,42-54,58-64,259-268,272-286 1ryx d1ryxa2 A:344-350,376-387,390-395,592-597,600-616 1ovt d1ovta1 A:5-12,41-52,55-60,250-255,257-275 1qw0 d1qw0a_ A:1-8,34-46,52-58,224-234,238-251 1amf d1amfa_ A:3-10,38-49,53-59,194-201,206-218 3mbp d3mbpa_ A:5-11,42-54,58-64,259-268,272-286 1mpd d1mpda_ A:6-11,42-54,58-64,259-268,272-286 1al3 d1al3a_ A:92-100,130-141,144-149,267-276,281-293 2hav d2hava1 A:341-347,373-384,387-392,585-590,590-609 1r1n d1r1ne_ E:1-8,34-46,52-58,224-234,238-251 1aiv d1aiva1 A:5-12,41-52,55-60,250-255,257-275 1biy d1biya1 A:4-11,41-52,55-60,253-259,263-279 1zmg d1zmga1 A:6-11,42-54,58-64,259-268,272-286 1ixc d1ixcb2 B:90-98,128-139,142-147,265-273,278-289 1xc1 d1xc1g_ G:1-8,34-46,52-58,224-234,238-251 1ez9 d1ez9b_ B:1006-1011,1042-1054,1058-1064,1259-1268,1272-1286 1jvx d1jvxa_ A:5-11,42-54,58-64,257-268,272-287 1d9y d1d9ya_ A:1-8,34-46,52-58,224-234,238-252 1nft d1nfta_ A:5-12,41-52,55-60,250-255,257-275 1iz1 d1iz1a2 A:89-98,128-139,142-147,265-274,278-292 1mrp d1mrpa_ A:1-8,34-46,52-58,224-234,238-251 1mdp d1mdp2_ 2:6-11,42-54,58-64,259-268,272-286 1i6q d1i6qa2 A:344-350,376-387,390-395,595-600,603-619 1n3x d1n3xa_ A:6-11,42-54,58-64,259-268,272-286 1dmb d1dmba_ A:6-11,42-54,58-64,259-268,272-286 1iej d1ieja_ A:4-12,41-52,55-60,250-255,257-275 1lls d1llsa_ A:6-11,42-54,58-64,259-268,272-287 1anf d1anfa_ A:6-11,42-54,58-64,259-268,272-286 4mbp d4mbpa_ A:6-11,42-54,58-64,259-268,272-286 1y4t d1y4ta_ A:6-13,39-51,57-63,235-245,249-262 2hav d2havb1 B:341-347,373-384,387-392,585-590,591-609 1xc1 d1xc1a_ A:1-8,34-46,52-58,224-234,238-251 1fqd d1fqda_ A:6-11,42-54,58-64,259-268,272-287 1urs d1ursa_ A:30-37,71-83,87-94,285-294,298-311 1iz1 d1iz1b2 B:90-98,128-139,142-147,264-274,278-294 1lax d1laxa_ A:5-11,42-54,58-64,257-268,272-286 2d3i d2d3ia1 A:5-12,41-52,55-60,250-255,257-275 1omp d1ompa_ A:6-11,42-54,58-64,259-268,272-286 1r1n d1r1ng_ G:1-8,34-46,52-58,224-234,238-251 1mpb d1mpba_ A:6-11,42-54,58-64,259-268,272-286 1ez9 d1ez9a_ A:6-11,42-54,58-64,259-268,272-286 1y4t d1y4td_ D:6-13,39-51,57-63,235-245,249-262 1iz1 d1iz1p2 P:89-98,128-139,142-147,264-274,278-292 1jw5 d1jw5a_ A:6-11,42-54,58-64,259-268,272-286 1urs d1ursb_ B:31-37,71-83,87-94,285-294,298-311 1a7l d1a7lc_ C:6-11,42-54,58-64,259-268,272-286 1ytv d1ytvb1 B:19-25,56-68,72-78,271-282,286-300 1mpc d1mpca_ A:6-11,42-54,58-64,259-268,272-286 1utb d1utbb_ B:96-103,137-145,148-153,270-279,284-299 1urd d1urdb_ B:31-37,71-83,87-94,285-294,298-311 1n3w d1n3wa_ A:6-11,42-54,58-64,257-268,272-287 1nnt d1nnta_ A:5-12,41-52,55-60,250-255,257-275 1mdp d1mdp1_ 1:6-11,42-54,58-64,259-268,272-286 1mg1 d1mg1a1 A:7-12,43-55,59-65,258-269,273-287 1nl5 d1nl5a_ A:6-11,42-54,58-64,257-268,272-286 1nh8 d1nh8a1 A:1-7,52-60,63-68,181-185,194-212 1xc1 d1xc1i_ I:1-7,34-46,52-58,224-234,238-251 1urd d1urda_ A:31-37,71-83,87-94,285-294,298-311 1lax d1laxc_ C:5-11,42-54,58-64,257-268,272-286 1urg d1urga_ A:30-37,71-83,87-94,285-294,298-311 2p0s d2p0sa1 A:50-57,79-87,94-100,109-115,119-143 1iiw d1iiwa_ A:5-12,53-64,67-72,191-196,198-215 1iud d1iuda_ A:5-11,42-54,58-64,259-268,272-287 1o7t d1o7tf_ F:1-8,34-46,52-58,224-234,238-251 1iit d1iita_ A:5-12,53-64,67-72,191-196,198-215 1ytv d1ytva1 A:20-25,56-68,72-78,271-282,286-300 1hsj d1hsja2 A:6-11,42-54,58-64,257-268,272-286 1uth d1uthb_ B:96-103,137-145,148-153,270-279,284-299 1hsj d1hsjb2 B:6-11,42-54,58-64,257-268,272-286 1n04 d1n04a1 A:5-12,41-52,55-60,250-255,257-275 1utb d1utba_ A:96-103,137-145,148-153,270-279,284-299 2nxo d2nxob1 B:7-12,39-50,53-58,182-191,198-220 1jvy d1jvya_ A:6-11,42-54,58-64,257-268,272-286 1nmu d1nmuc_ C:6-11,42-54,58-64,257-268,272-287 1ziu d1ziua1 A:6-11,42-54,58-64,257-268,272-287 2nvu d2nvub2 B:1006-1012,1043-1055,1059-1065,1260-1269,1273-1288 2nxo d2nxod1 D:7-12,39-50,53-58,182-191,199-220 1elj d1elja_ A:5-13,45-57,61-67,260-271,276-290 1zkb d1zkba1 A:6-11,42-54,58-64,257-268,272-287 1l5t d1l5ta_ A:5-11,41-52,55-60,255-259,263-279 1cb6 d1cb6a1 A:1005-1011,1041-1052,1055-1060,1255-1259,1263-1279 1uth d1utha_ A:96-103,137-145,148-153,270-279,284-299 1t0k d1t0ka_ A:6-11,42-54,58-64,257-268,272-286 3csb d3csba2 A:6-11,42-53,58-64,257-268,272-286 1sw5 d1sw5d_ D:7-13,44-55,58-63,216-221,227-238 2nxo d2nxoa1 A:7-12,39-50,53-58,182-191,198-220 1ixi d1ixia_ A:1-9,37-48,51-56,251-262,266-284 1lfh d1lfha1 A:5-11,41-52,55-60,255-259,263-279 1a7l d1a7lb_ B:6-11,42-54,58-64,257-268,272-286 1l5t d1l5tb_ B:5-11,41-52,55-60,255-259,263-279 2nxo d2nxoc1 C:7-12,39-50,53-58,182-191,198-220 1sw2 d1sw2a_ A:7-13,44-55,58-63,216-221,227-238 1sw5 d1sw5b_ B:7-13,44-55,58-63,216-221,227-238 1zjl d1zjla1 A:6-11,42-54,58-64,257-268,272-286 1sw5 d1sw5a_ A:7-13,44-55,58-63,216-221,227-238 1si0 d1si0a_ A:2-9,35-47,53-59,228-238,242-255 1poy d1poy3_ 3:27-34,61-72,78-84,252-263,267-281 2czl d2czla1 A:3-9,38-49,52-57,173-183,186-208 1a7l d1a7la_ A:6-11,42-54,58-64,257-268,272-286 1sw5 d1sw5c_ C:6-13,44-55,58-63,216-221,227-238 1poy d1poy2_ 2:27-34,61-72,78-84,252-263,267-281 1poy d1poy4_ 4:27-34,61-72,78-84,252-263,267-281 1pot d1pota_ A:26-34,61-72,78-84,252-263,267-281 2i6e d2i6ee1 E:16-22,46-57,60-65,201-211,216-234 1eu8 d1eu8a_ A:5-13,45-60,65-71,290-301,305-318 1oib d1oibb_ B:2-9,37-48,51-56,251-262,266-284 1poy d1poy1_ 1:27-34,61-72,78-84,252-263,267-281 1a55 d1a55a_ A:1-9,37-48,51-56,251-262,266-284 1quj d1quja_ A:1-9,37-48,51-56,251-262,266-285 2h25 d2h25a1 A:5-11,42-54,58-64,259-268,272-287 1qui d1quia_ A:1-9,37-48,51-56,251-262,266-285 2i6e d2i6ea1 A:16-22,46-57,60-65,201-211,216-234 1pbp d1pbpa_ A:1-9,37-48,51-56,251-262,266-285 1ixh d1ixha_ A:1-9,37-48,51-56,251-262,266-285 2abh d2abha_ A:1-9,37-48,51-56,251-262,266-285 2i6e d2i6ed1 D:16-22,46-57,60-65,201-211,216-234 1a40 d1a40a_ A:1-9,37-48,51-56,251-262,266-285 1a54 d1a54a_ A:1-9,37-48,51-56,251-262,266-285 1qul d1qula_ A:1-9,37-48,51-56,251-262,266-285 1twy d1twyf_ F:28-35,64-75,78-84,235-244,249-261 1quk d1quka_ A:1-9,37-48,51-56,251-262,266-285 1twy d1twyg_ G:28-35,64-75,78-84,235-244,249-261 1ixg d1ixga_ A:1-9,37-48,51-56,251-262,266-285 2i6e d2i6eh1 H:17-22,46-57,60-65,201-211,216-234 1pc3 d1pc3b_ B:27-35,64-75,78-83,287-298,302-322 1twy d1twyc_ C:28-35,64-75,78-84,235-244,249-261 1twy d1twyb_ B:29-35,64-75,78-84,235-244,249-261 1twy d1twya_ A:28-35,64-75,78-84,235-244,249-261 1twy d1twye_ E:29-35,64-75,78-84,235-244,249-261 1twy d1twyh_ H:28-35,64-75,78-84,235-244,249-261 1pc3 d1pc3a_ A:27-35,64-75,78-83,287-298,302-322 1twy d1twyd_ D:28-35,64-75,78-84,235-244,249-261 1si1 d1si1a_ A:2-9,38-47,53-59,228-238,242-256 1oib d1oiba_ A:1-9,37-48,51-56,251-262,266-285 1sw4 d1sw4a_ A:6-12,44-55,58-63,216-221,227-238 1sw4 d1sw4b_ B:6-12,44-55,58-63,216-221,227-238 1r9q d1r9qa_ A:8-15,45-56,59-66,233-241,248-258 2owt d2owta1 A:6-13,42-51,57-63,236-246,250-263 1r9l d1r9la_ A:8-15,45-56,59-66,233-241,248-258 2i6e d2i6ef1 F:17-21,46-57,60-65,201-211,216-234 1sw1 d1sw1a_ A:6-12,44-55,58-63,216-221,227-238 1sw1 d1sw1b_ B:6-12,44-55,58-63,216-221,227-238 2esn d2esnd2 D:98-105,140-147,150-155,275-284,289-302 1zbm d1zbma1 A:1-8,37-48,51-57,171-181,184-206 2esn d2esna2 A:98-105,140-147,150-155,275-284,289-302 2esn d2esnb2 B:98-105,140-147,150-155,275-284,290-302 1y9u d1y9ua_ A:6-13,42-51,57-63,236-246,250-263 2ows d2owsa1 A:6-13,42-51,57-63,236-246,250-263 2i6e d2i6eb1 B:16-21,46-57,60-65,201-211,216-234 2i6e d2i6ec1 C:16-21,46-57,60-65,201-210,216-234 2i6e d2i6eg1 G:16-21,46-57,60-65,201-210,216-234 1q35 d1q35a_ A:2-9,39-47,53-59,228-238,242-255 2esn d2esnc2 C:98-105,140-147,150-156,275-284,289-302 1ezo d1ezoa_ A:4-11,40-53,57-64,259-266,272-286 2. c.152.1 CbiG N-terminal domain-like probable biological unit is a homodimer; putative active site is formed by residues from both subunits CbiG N-terminal domain-like 3 layers: a/b/a; mixed beta-sheet of 6 strands, order 213456, strand 5 is antiparallel to the rest 3eeq d3eeqa2 A:62-68,69-81,88-94,98-105,109-122 3eeq d3eeqb2 B:62-68,69-81,88-94,98-105,109-122 3. e.7.1 Carbohydrate phosphatase Carbohydrate phosphatase N-terminal domain is an alpha+beta, C-terminal domain is an alpha/beta with mixed beta-sheet 1lbx d1lbxb_ B:449-455,471-482,485-489,535-540,540-552 1lbz d1lbza_ A:149-155,171-182,185-189,235-240,240-252 1lbv d1lbvb_ B:449-455,471-482,485-489,535-540,540-552 1lbx d1lbxa_ A:149-155,171-182,185-189,235-240,240-252 1lbv d1lbva_ A:149-155,171-182,185-189,235-240,240-252 1lby d1lbya_ A:149-155,171-182,185-189,235-240,240-252 1lbw d1lbwa_ A:149-155,171-182,185-189,235-240,240-252 1vdw d1vdwb_ B:149-156,174-185,188-194,235-240,241-253 1lbw d1lbwb_ B:449-455,471-482,485-489,535-540,540-552 1ka0 d1ka0a_ A:232-236,264-274,277-281,329-335,337-355 1qgx d1qgxa_ A:232-236,264-274,277-281,329-335,337-355 1k9z d1k9za_ A:232-236,264-274,277-281,329-335,337-355 1dk4 d1dk4b_ B:447-454,474-485,488-494,535-540,541-552 1k9y d1k9ya_ A:232-236,264-274,277-281,329-335,337-355 1lby d1lbyb_ B:449-455,471-482,485-489,535-540,540-552 1lbz d1lbzb_ B:449-455,471-482,485-489,535-540,540-552 1ka1 d1ka1a_ A:232-236,264-274,277-281,329-335,337-355 1vdw d1vdwa_ A:149-156,174-185,188-194,235-240,241-252 1dk4 d1dk4a_ A:147-154,174-185,188-194,235-240,241-252 1g0i d1g0ib_ B:447-454,474-485,488-494,535-540,541-552 1spi d1spia_ A:232-237,273-285,285-291,341-346,347-358 1dbz d1dbzc_ C:231-236,272-284,284-290,340-345,346-357 1dcu d1dcuc_ C:231-236,272-284,284-290,340-345,346-357 1dcu d1dcua_ A:231-236,272-284,284-290,340-345,346-357 1fbg d1fbgb_ B:207-211,247-259,260-265,315-320,320-335 2fbp d2fbpb_ B:207-211,247-259,260-265,315-320,320-335 1d9q d1d9qc_ C:231-236,272-284,284-290,340-345,346-357 1d9q d1d9qd_ D:231-236,272-284,284-290,340-345,346-357 1g0h d1g0ha_ A:147-154,174-185,188-194,235-240,241-252 1dbz d1dbza_ A:231-236,272-284,284-290,340-345,346-357 1dcu d1dcub_ B:231-236,272-284,284-290,340-345,346-357 1d9q d1d9qb_ B:231-236,272-284,284-290,340-345,346-357 1d9q d1d9qa_ A:231-236,272-284,284-290,340-345,346-357 1awb d1awbb_ B:157-161,195-206,209-215,248-254,255-266 1dcu d1dcud_ D:231-236,272-284,284-290,340-345,346-357 1g0h d1g0hb_ B:447-453,474-485,488-493,535-540,541-552 1imc d1imcb_ B:157-161,195-206,209-215,248-254,255-266 1ime d1imea_ A:157-161,195-206,209-215,248-254,255-267 1g0i d1g0ia_ A:147-154,174-185,188-194,235-240,241-252 1imb d1imba_ A:157-161,195-206,209-215,248-254,255-267 1ima d1imab_ B:157-161,195-206,209-215,248-254,255-266 1spi d1spic_ C:232-237,273-285,285-291,341-346,347-357 1imd d1imdb_ B:157-161,195-206,209-215,248-254,255-266 1dbz d1dbzb_ B:232-236,272-284,285-290,340-345,346-357 1awb d1awba_ A:157-161,195-206,209-215,248-254,255-266 1imf d1imfa_ A:157-161,195-206,209-215,248-254,255-266 1imd d1imda_ A:157-161,195-206,209-215,248-254,255-266 1dbz d1dbzd_ D:232-236,272-284,285-290,340-345,346-357 1jp4 d1jp4a_ A:190-195,220-231,234-240,281-288,290-298 1inp d1inpa_ A:264-268,290-301,304-310,370-378,378-388 1xi6 d1xi6a_ A:151-157,175-186,189-195,236-241,242-250 1spi d1spid_ D:232-237,273-285,285-291,341-346,347-358 1spi d1spib_ B:232-237,273-285,285-290,342-346,347-358 3fbp d3fbpb_ B:207-211,247-259,260-265,315-320,321-335 1fta d1ftad_ D:206-211,247-259,259-265,315-320,321-335 1imc d1imca_ A:155-161,195-206,209-215,248-254,255-266 1ima d1imaa_ A:155-161,195-206,209-215,248-254,255-267 1fbe d1fbeb_ B:207-211,247-259,260-265,315-320,321-335 1fta d1ftaa_ A:206-211,247-259,259-265,315-320,321-335 1fta d1ftac_ C:206-211,247-259,259-265,315-320,321-335 1imb d1imbb_ B:155-161,195-206,209-215,248-254,255-266 2hhm d2hhma_ A:155-161,195-206,209-215,248-254,255-267 2hhm d2hhmb_ B:155-161,195-206,209-215,248-254,255-266 1ime d1imeb_ B:155-161,195-206,209-215,248-254,255-266 1bk4 d1bk4a_ A:206-211,247-259,259-265,315-320,321-336 1fpb d1fpbb_ B:207-211,247-259,260-265,315-320,321-335 1fta d1ftab_ B:206-211,247-259,259-265,315-320,321-335 2fbp d2fbpa_ A:207-211,247-259,259-265,315-320,321-335 4fbp d4fbpd_ D:206-211,247-259,259-265,315-320,321-335 1rdz d1rdza_ A:206-211,247-259,259-265,315-320,321-335 1lev d1leva_ A:206-211,247-259,259-265,315-320,321-335 1lev d1levf_ F:206-211,247-259,259-265,315-320,321-335 3fbp d3fbpa_ A:207-211,247-259,260-265,315-320,321-335 1fbp d1fbpa_ A:206-211,247-259,259-265,315-320,321-335 1fbh d1fbhb_ B:206-211,247-259,259-265,315-320,321-335 1nux d1nuxa_ A:1206-1211,1247-1259,1259-1265,1315-1320,1321-1335 5fbp d5fbpb_ B:206-211,247-259,259-265,315-320,321-335 1fbf d1fbfb_ B:206-211,247-259,259-265,315-320,321-335 5fbp d5fbpa_ A:206-211,247-259,259-265,315-320,321-335 1frp d1frpa_ A:206-211,247-259,259-265,315-320,321-335 4fbp d4fbpc_ C:206-211,247-259,259-265,315-320,321-335 2f3b d2f3ba1 A:206-211,247-259,259-265,315-320,321-335 1rdz d1rdzb_ B:206-211,247-259,259-265,315-320,321-335 2f3h d2f3ha1 A:206-211,247-259,259-265,315-320,321-335 1q9d d1q9da_ A:206-211,247-259,259-265,315-320,321-335 1fbc d1fbca_ A:206-211,247-259,259-265,315-320,321-335 1nuy d1nuya_ A:1206-1211,1247-1259,1259-1265,1315-1320,1321-1335 1cnq d1cnqa_ A:206-211,247-259,259-265,315-320,321-335 1nv2 d1nv2a_ A:1206-1211,1247-1259,1259-1265,1315-1320,1321-1335 1fj9 d1fj9a_ A:206-211,247-259,259-265,315-320,321-335 1fsa d1fsab_ B:206-211,247-259,259-265,315-320,321-335 1nv7 d1nv7b_ B:2206-2211,2247-2259,2259-2265,2315-2320,2321-2335 1fbc d1fbcb_ B:206-211,247-259,259-265,315-320,321-335 4fbp d4fbpa_ A:206-211,247-259,259-265,315-320,321-335 1eyj d1eyjb_ B:206-211,247-259,259-265,315-320,321-335 1fpd d1fpda_ A:206-211,247-259,259-265,315-320,321-335 1rdy d1rdya_ A:206-211,247-259,259-265,315-320,321-335 1kz8 d1kz8a_ A:206-211,247-259,259-265,315-320,321-335 1nv4 d1nv4a_ A:1206-1211,1247-1259,1259-1265,1315-1320,1321-1335 1nuw d1nuwa_ A:1206-1211,1247-1259,1259-1265,1315-1320,1321-1335 1fj9 d1fj9b_ B:206-211,247-259,259-265,315-320,321-335 1nv7 d1nv7a_ A:1206-1211,1247-1259,1259-1265,1315-1320,1321-1335 1fj6 d1fj6a_ A:206-211,247-259,259-265,315-320,321-335 1kz8 d1kz8f_ F:206-211,247-259,259-265,315-320,321-335 1nuz d1nuza_ A:1206-1211,1247-1259,1259-1265,1315-1320,1321-1335 1fpj d1fpjb_ B:206-211,247-259,259-265,315-320,321-335 1fpf d1fpfa_ A:206-211,247-259,259-265,315-320,321-335 1fpe d1fpeb_ B:206-211,247-259,259-265,315-320,321-335 1fpb d1fpba_ A:206-211,247-259,259-265,315-320,321-335 1nv3 d1nv3a_ A:1206-1211,1247-1259,1259-1265,1315-1320,1321-1335 1nv5 d1nv5a_ A:1206-1211,1247-1259,1259-1265,1315-1320,1321-1335 1nv1 d1nv1a_ A:1206-1211,1247-1259,1259-1265,1315-1320,1321-1335 1nv6 d1nv6a_ A:1206-1211,1247-1259,1259-1265,1315-1320,1321-1335 1fsa d1fsaa_ A:206-211,247-259,259-265,315-320,321-335 1fbh d1fbha_ A:206-211,247-259,259-265,315-320,321-335 1eyk d1eykb_ B:206-211,247-259,259-265,315-320,321-335 1fpj d1fpja_ A:206-211,247-259,259-265,315-320,321-335 1fpg d1fpga_ A:206-211,247-259,259-265,315-320,321-335 1nv0 d1nv0a_ A:1206-1211,1247-1259,1259-1265,1315-1320,1321-1335 1fpd d1fpdb_ B:206-211,247-259,259-265,315-320,321-335 1fpl d1fplb_ B:206-211,247-259,259-265,315-320,321-335 1fpl d1fpla_ A:206-211,247-259,259-265,315-320,321-335 1eyi d1eyia_ A:206-211,247-259,259-265,315-320,321-335 1fpk d1fpka_ A:207-211,247-259,260-265,315-320,321-335 1fbd d1fbda_ A:207-211,247-259,260-265,315-320,321-335 1fpg d1fpgb_ B:206-211,247-259,259-265,315-320,321-335 1fpi d1fpia_ A:206-211,247-259,259-265,315-320,321-335 4fbp d4fbpb_ B:206-211,247-259,259-265,315-320,321-335 1fpf d1fpfb_ B:206-211,247-259,259-265,315-320,321-335 1eyk d1eyka_ A:206-211,247-259,259-265,315-320,321-335 1frp d1frpb_ B:206-211,247-259,259-265,315-320,321-335 1fpe d1fpea_ A:206-211,247-259,259-265,315-320,321-335 2qvu d2qvua1 A:206-211,247-259,259-265,315-320,321-336 1fpi d1fpib_ B:206-211,247-259,259-265,315-320,321-335 1rdy d1rdyb_ B:206-211,247-259,259-265,315-320,321-336 1fbe d1fbea_ A:206-211,247-259,259-265,315-320,321-335 2f3d d2f3da1 A:206-211,247-259,259-265,315-320,321-337 1fpk d1fpkb_ B:206-211,247-259,259-265,315-320,321-335 1fbd d1fbdb_ B:206-211,247-259,259-265,315-320,321-335 1eyj d1eyja_ A:206-211,247-259,259-265,315-320,321-335 1rdx d1rdxa_ A:207-211,247-259,259-265,315-319,320-335 1fbp d1fbpb_ B:206-211,247-259,259-265,315-320,321-335 1fbf d1fbfa_ A:206-211,247-259,259-265,315-320,321-335 1fbg d1fbga_ A:206-211,247-259,259-265,315-320,321-335 1q9d d1q9db_ B:206-211,247-259,259-265,315-320,321-335 1jp4 d1jp4a_ A:190-195,220-231,234-240,281-288,299-307 2qvv d2qvvb1 B:206-211,247-259,259-265,315-320,321-337 2qvu d2qvub1 B:206-211,247-259,259-265,315-320,321-337 2f3h d2f3hb1 B:206-211,247-259,259-265,315-320,321-337 2qvv d2qvva1 A:206-211,247-259,259-265,315-320,321-337 5. c.72.1 Ribokinase-like has extra strand located between strands 2 and 3 ! Ribokinase-like core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest ! potential superfamily: members of this fold have similar functions but different ATP-binding sites 1esq d1esqc1 C:118-123,123-132,163-169,171-177,213-237 1c3q d1c3qc1 C:118-123,123-132,163-169,171-177,213-237 1esj d1esjc1 C:118-123,123-132,163-169,171-177,213-237 1tyy d1tyyb_ B:184-189,201-213,215-221,224-231,269-291 1l2l d1l2la_ A:290-295,322-338,340-346,348-355,358-379 2abq d2abqb1 B:176-181,195-210,212-218,222-228,264-283 1esq d1esqb1 B:118-123,123-132,163-169,171-177,213-237 2ax3 d2ax3a1 A:359-366,366-375,397-403,405-411,446-465 1esj d1esjb1 B:118-123,123-132,163-169,171-177,213-237 1ekk d1ekka_ A:118-123,123-132,163-169,171-177,213-237 1ekq d1ekqb_ B:118-123,123-132,163-169,171-177,213-237 1c3q d1c3qa1 A:118-123,123-133,163-169,171-177,213-237 1ekq d1ekqa_ A:118-123,123-131,163-169,171-177,213-237 2dcn d2dcnh1 H:189-194,206-218,219-225,228-235,271-289 1c3q d1c3qa1 A:118-123,146-162,163-169,171-177,213-237 1u2x d1u2xa_ A:304-309,334-350,352-358,360-368,373-395 2dcn d2dcnb1 B:189-194,206-218,219-225,228-235,271-289 1u2x d1u2xb_ B:304-309,334-350,352-358,360-368,373-395 1c3q d1c3qb1 B:118-123,123-132,163-169,171-177,213-237 1wye d1wyee1 E:189-194,206-218,219-225,228-235,271-289 1wye d1wyef1 F:189-194,206-218,219-225,228-235,271-289 1c3q d1c3qc1 C:118-123,146-162,163-169,171-177,213-237 1tz3 d1tz3b_ B:184-189,201-213,215-222,224-231,269-291 1esj d1esja1 A:118-123,123-133,163-169,171-177,213-237 1esj d1esjc1 C:118-123,147-162,163-169,171-177,213-237 2abq d2abqa1 A:176-181,195-210,212-219,221-228,264-283 1ekk d1ekkb_ B:118-123,123-132,163-169,171-177,213-237 1ekk d1ekka_ A:118-123,146-162,163-169,171-177,213-237 2dcn d2dcng1 G:189-194,206-218,219-225,228-235,271-290 2dcn d2dcne1 E:189-194,206-218,219-225,228-235,271-290 2dcn d2dcnj1 J:189-194,206-218,219-225,228-235,271-290 2dcn d2dcnd1 D:189-194,206-218,219-225,228-235,271-290 1wye d1wyea1 A:189-194,206-218,219-225,228-235,271-290 1esq d1esqa1 A:118-123,123-133,163-169,171-177,213-237 2dcn d2dcnk1 K:189-194,206-218,219-225,228-235,271-290 1wye d1wyec1 C:189-194,206-218,219-225,228-235,271-290 2ajr d2ajrb1 B:187-192,207-223,223-230,232-239,277-296 2dcn d2dcna1 A:189-194,206-218,219-225,228-235,271-290 1esj d1esja1 A:118-123,146-162,163-169,171-177,213-237 2dcn d2dcnl1 L:189-194,206-218,219-225,228-235,271-290 2dcn d2dcni1 I:189-194,206-218,219-225,228-235,271-290 2ajr d2ajra1 A:187-192,207-222,223-230,232-239,277-296 2dcn d2dcnf1 F:189-194,206-218,219-225,228-235,271-290 1ekq d1ekqb_ B:118-123,147-162,163-169,171-177,213-237 1gc5 d1gc5a_ A:300-305,329-345,347-354,355-362,365-386 1wye d1wyeb1 B:189-194,206-218,219-225,228-235,271-289 2dcn d2dcnc1 C:189-194,206-218,219-225,228-235,271-290 1ua4 d1ua4a_ A:287-292,319-335,337-344,345-352,355-376 2i6a d2i6ad1 D:218-223,223-235,260-266,270-276,315-331 2i6a d2i6ab1 B:218-223,240-251,260-266,270-276,315-331 2awd d2awdb1 B:180-185,200-211,218-225,227-234,270-289 1esj d1esjb1 B:118-123,146-162,163-169,171-177,213-237 1c3q d1c3qb1 B:118-123,146-162,163-169,171-177,213-237 2i6a d2i6ab1 B:218-223,223-235,260-266,270-276,315-331 2i6a d2i6ad1 D:218-223,240-251,260-266,270-276,315-331 1ekq d1ekqa_ A:118-123,147-162,163-169,171-177,213-237 1ekk d1ekkb_ B:118-123,146-162,163-169,171-177,213-237 1tz6 d1tz6b_ B:184-189,205-213,215-222,224-231,269-291 2ax3 d2ax3a1 A:359-366,384-396,397-403,405-411,446-465 2i6a d2i6ac1 C:218-223,223-235,260-266,270-276,315-331 2abq d2abqb1 B:176-181,181-190,212-218,222-228,264-283 2i6a d2i6ac1 C:218-223,240-251,260-266,270-276,315-331 1vk4 d1vk4a_ A:168-173,185-197,199-206,207-213,250-269 2i6a d2i6aa1 A:218-223,223-235,260-266,270-276,315-331 2i6a d2i6aa1 A:218-223,240-251,260-266,270-276,315-331 1wye d1wyed1 D:189-194,206-218,219-225,228-235,271-290 1gc5 d1gc5a_ A:300-305,305-317,347-354,355-362,365-386 1vm7 d1vm7b_ B:173-178,178-191,209-216,218-225,261-280 1jxh d1jxhb_ B:134-139,154-169,171-176,187-192,228-247 1jxh d1jxha_ A:134-139,154-169,171-176,187-192,228-247 1vm7 d1vm7a_ A:173-178,178-191,209-216,218-225,261-280 1ub0 d1ub0a_ A:132-137,151-166,168-174,181-189,225-244 2abq d2abqa1 A:176-181,181-190,212-219,221-228,264-283 2f02 d2f02b1 B:180-184,200-211,218-225,227-234,270-289 1l2l d1l2la_ A:290-295,295-307,340-346,348-355,358-379 1kyh d1kyha_ A:142-149,149-158,181-187,189-195,231-255 1esq d1esqc1 C:118-123,148-162,163-169,171-177,213-237 1ua4 d1ua4a_ A:287-292,292-304,337-344,345-352,355-376 2f02 d2f02a1 A:180-185,200-211,218-225,227-234,270-289 2awd d2awda1 A:180-185,200-211,218-225,227-234,270-289 1u2x d1u2xa_ A:304-309,309-321,352-358,360-368,373-395 1lio d1lioa_ A:218-224,240-251,273-279,283-287,333-352 1jxh d1jxha_ A:134-139,139-148,171-176,187-192,228-247 1jxh d1jxhb_ B:134-139,139-148,171-176,187-192,228-247 1ub0 d1ub0a_ A:132-137,137-146,168-174,181-189,225-244 1esq d1esqb1 B:118-123,149-162,163-169,171-177,213-237 1bx4 d1bx4a_ A:218-223,240-251,260-267,269-276,315-334 1esq d1esqa1 A:118-123,150-162,163-169,171-177,213-237 1u2x d1u2xb_ B:304-309,309-321,352-358,360-368,373-395 1kyh d1kyha_ A:142-149,167-180,181-187,189-195,231-255 1v1a d1v1ab_ B:188-193,203-212,214-220,223-230,266-285 1v1a d1v1aa_ A:188-193,203-212,214-220,223-230,266-285 2a9z d2a9za1 A:218-223,223-235,273-279,282-291,333-352 1vk4 d1vk4a_ A:168-173,173-182,199-206,207-213,250-269 2a9y d2a9ya1 A:218-223,223-235,273-279,282-291,333-352 2ab8 d2ab8a1 A:218-223,223-235,273-279,282-291,333-352 1lik d1lika_ A:218-223,223-235,273-279,282-291,333-352 1tyy d1tyyb_ B:184-189,189-198,215-221,224-231,269-291 2awd d2awda1 A:180-185,185-194,218-225,227-234,270-289 1vm7 d1vm7b_ B:173-178,195-207,209-216,218-225,261-280 1v1b d1v1bc_ C:188-193,203-212,214-221,223-230,266-285 1bx4 d1bx4a_ A:218-223,223-235,260-267,269-276,315-334 1v1b d1v1bb_ B:188-193,203-212,214-221,223-230,266-285 1dgm d1dgma_ A:218-223,223-235,273-279,283-291,333-352 1v1b d1v1ba_ A:188-193,203-212,214-221,223-230,266-285 1v1b d1v1bd_ D:188-193,203-212,214-221,223-230,266-285 2fv7 d2fv7b1 B:194-199,213-228,230-237,239-246,286-305 1lik d1lika_ A:218-223,241-253,273-279,282-291,333-352 1v1s d1v1sf_ F:188-193,203-212,214-220,223-230,266-285 1v1s d1v1sa_ A:188-193,203-212,214-220,223-230,266-285 1v1s d1v1se_ E:188-193,203-212,214-220,223-230,266-285 1v1s d1v1sb_ B:188-193,203-212,214-220,223-230,266-285 2fv7 d2fv7a1 A:194-199,213-228,230-237,239-246,286-304 1v1s d1v1sc_ C:188-193,203-212,214-220,223-230,266-285 2aa0 d2aa0a1 A:218-223,223-235,273-279,282-291,333-352 2abs d2absa1 A:218-223,223-235,273-279,282-291,333-352 1v1s d1v1sd_ D:188-193,203-212,214-220,223-230,266-285 1rka d1rkaa_ A:182-187,201-216,218-225,227-234,270-289 1vm7 d1vm7a_ A:173-178,195-207,209-216,218-225,261-280 1v19 d1v19b_ B:188-193,203-212,214-220,222-230,266-285 1lii d1liia_ A:218-223,241-254,273-278,282-291,333-352 1rk2 d1rk2c_ C:182-187,201-216,218-225,227-234,270-289 2awd d2awdb1 B:180-185,185-194,218-225,227-234,270-289 1rk2 d1rk2a_ A:182-187,201-216,218-225,227-234,270-289 2fv7 d2fv7a1 A:194-199,199-208,230-237,239-246,286-304 1rk2 d1rk2d_ D:182-187,201-216,218-225,227-234,270-289 2f02 d2f02a1 A:180-185,185-194,218-225,227-234,270-289 1rk2 d1rk2b_ B:182-187,201-216,218-225,227-234,270-289 1rk2 d1rk2b_ B:182-187,187-196,218-225,227-234,270-289 1rk2 d1rk2c_ C:182-187,187-196,218-225,227-234,270-289 1gqt d1gqtc_ C:182-187,201-216,218-225,227-234,270-289 1rk2 d1rk2a_ A:182-187,187-196,218-225,227-234,270-289 1lio d1lioa_ A:218-224,223-235,273-279,283-287,333-352 1rk2 d1rk2d_ D:182-187,187-196,218-225,227-234,270-289 2a9z d2a9za1 A:218-223,248-265,273-279,282-291,333-352 1rks d1rksa_ A:182-187,201-216,218-225,227-234,270-289 2abs d2absa1 A:218-223,248-265,273-279,282-291,333-352 1lii d1liia_ A:218-223,223-235,273-278,282-291,333-352 1rkd d1rkda_ A:182-187,201-216,218-225,227-234,270-289 2a9y d2a9ya1 A:218-223,248-265,273-279,282-291,333-352 1dgm d1dgma_ A:218-223,248-265,273-279,283-291,333-352 2ab8 d2ab8a1 A:218-223,248-265,273-279,282-291,333-352 1rkd d1rkda_ A:182-187,187-196,218-225,227-234,270-289 1v19 d1v19a_ A:188-193,203-212,214-221,223-230,266-285 1lij d1lija_ A:218-223,241-253,273-279,282-291,333-352 2fv7 d2fv7b1 B:194-199,199-208,230-237,239-246,286-305 1rka d1rkaa_ A:182-187,187-196,218-225,227-234,270-289 1tz6 d1tz6b_ B:184-189,189-198,215-222,224-231,269-291 2aa0 d2aa0a1 A:218-223,248-265,273-279,282-291,333-352 1rks d1rksa_ A:182-187,187-196,218-225,227-234,270-289 1lij d1lija_ A:218-223,223-235,273-279,282-291,333-352 1gqt d1gqta_ A:182-187,201-216,218-225,227-234,270-289 1gqt d1gqtc_ C:182-187,187-196,218-225,227-234,270-289 1gqt d1gqtb_ B:182-187,201-216,218-225,227-234,270-289 1jxi d1jxia_ A:134-139,154-169,171-176,187-192,228-251 1jxi d1jxib_ B:134-139,154-169,171-176,187-192,228-251 1gqt d1gqta_ A:182-187,187-196,218-225,227-234,270-289 1gqt d1gqtd_ D:182-187,201-216,218-225,227-234,270-289 1tyy d1tyya_ A:184-189,205-213,216-221,224-231,269-291 2dcn d2dcnb1 B:189-194,194-203,219-225,228-235,271-289 1wye d1wyee1 E:189-194,194-203,219-225,228-235,271-289 1tz3 d1tz3b_ B:184-189,189-198,215-222,224-231,269-291 2dcn d2dcnh1 H:189-194,194-203,219-225,228-235,271-289 1gqt d1gqtb_ B:182-187,187-196,218-225,227-234,270-289 1gqt d1gqtd_ D:182-187,187-196,218-225,227-234,270-289 1vi9 d1vi9b_ B:141-146,160-175,177-184,193-201,239-262 1tz6 d1tz6a_ A:184-189,205-213,216-221,224-231,269-291 1vi9 d1vi9b_ B:141-146,146-155,177-184,193-201,239-262 1jxi d1jxia_ A:134-139,139-148,171-176,187-192,228-251 1vi9 d1vi9a_ A:141-146,160-175,177-184,193-201,239-262 1jxi d1jxib_ B:134-139,139-148,171-176,187-192,228-251 1vi9 d1vi9a_ A:141-146,146-155,177-184,193-201,239-262 1vi9 d1vi9c_ C:141-146,160-175,177-184,193-201,239-262 1tz6 d1tz6a_ A:184-189,189-198,216-221,224-231,269-291 1wye d1wyef1 F:189-194,194-203,219-225,228-235,271-289 1tz3 d1tz3a_ A:184-189,205-213,216-221,224-231,269-291 1vi9 d1vi9c_ C:141-146,146-155,177-184,193-201,239-262 1tyy d1tyya_ A:184-189,189-198,216-221,224-231,269-291 2afb d2afba1 A:189-194,217-233,235-245,248-259,295-314 2dcn d2dcng1 G:189-194,194-203,219-225,228-235,271-290 2dcn d2dcne1 E:189-194,194-203,219-225,228-235,271-290 2dcn d2dcnj1 J:189-194,194-203,219-225,228-235,271-290 2dcn d2dcnl1 L:189-194,194-203,219-225,228-235,271-290 2dcn d2dcnd1 D:189-194,194-203,219-225,228-235,271-290 2f02 d2f02b1 B:180-184,185-194,218-225,227-234,270-289 2dcn d2dcni1 I:189-194,194-203,219-225,228-235,271-290 1tz3 d1tz3a_ A:184-189,189-198,216-221,224-231,269-291 2afb d2afbb1 B:189-193,217-233,235-245,248-259,295-314 1vi9 d1vi9d_ D:141-146,160-175,177-184,192-201,239-262 1vi9 d1vi9d_ D:141-146,146-155,177-184,192-201,239-262 2dcn d2dcnk1 K:189-194,194-203,219-225,228-235,271-290 1wye d1wyec1 C:189-194,194-203,219-225,228-235,271-290 2dcn d2dcnf1 F:189-194,194-203,219-225,228-235,271-290 2dcn d2dcnc1 C:189-194,194-203,219-225,228-235,271-290 2dcn d2dcna1 A:189-194,194-203,219-225,228-235,271-290 1td2 d1td2a_ A:141-146,160-175,177-184,192-201,239-262 1td2 d1td2a_ A:141-146,146-155,177-184,192-201,239-262 1td2 d1td2b_ B:141-146,160-175,177-184,193-201,239-262 1wye d1wyeb1 B:189-194,194-203,219-225,228-235,271-289 1td2 d1td2b_ B:141-146,146-155,177-184,193-201,239-262 1wye d1wyea1 A:189-194,194-203,219-225,228-235,271-290 1v1s d1v1sc_ C:188-193,193-202,214-220,223-230,266-285 1wye d1wyed1 D:189-194,194-203,219-225,228-235,271-290 1v1s d1v1sf_ F:188-193,193-202,214-220,223-230,266-285 1v1s d1v1se_ E:188-193,193-202,214-220,223-230,266-285 1v1s d1v1sb_ B:188-193,193-202,214-220,223-230,266-285 1v1s d1v1sa_ A:188-193,193-202,214-220,223-230,266-285 1v1s d1v1sd_ D:188-193,193-202,214-220,223-230,266-285 1v19 d1v19b_ B:188-193,193-202,214-220,222-230,266-285 1v19 d1v19a_ A:188-193,193-202,214-221,223-230,266-285 1ygk d1ygka1 A:145-150,164-179,181-188,197-209,251-279 1ygk d1ygka1 A:145-150,150-159,181-188,197-209,251-279 1rfv d1rfva_ A:145-150,164-179,181-188,197-208,251-279 1yhj d1yhja1 A:145-150,164-179,181-188,197-209,251-279 1rfv d1rfva_ A:145-150,150-159,181-188,197-208,251-279 1ygj d1ygja1 A:145-150,164-179,181-187,197-210,251-279 1lhp d1lhpa_ A:145-150,164-179,181-188,197-208,251-279 1yhj d1yhja1 A:145-150,150-159,181-188,197-209,251-279 2afb d2afba1 A:189-194,194-203,235-245,248-259,295-314 1rft d1rfta_ A:145-149,164-179,181-188,197-210,251-279 1ygj d1ygja1 A:145-150,150-159,181-187,197-210,251-279 1lhr d1lhra_ A:145-150,164-179,181-188,197-208,251-279 1lhp d1lhpa_ A:145-150,150-159,181-188,197-208,251-279 1rfu d1rfue_ E:145-150,164-179,181-188,197-210,251-279 1rfu d1rfuf_ F:145-150,164-179,181-188,197-210,251-279 1rfu d1rfub_ B:145-150,164-179,181-188,197-210,251-279 1rft d1rfta_ A:145-149,150-159,181-188,197-210,251-279 1rfu d1rfuc_ C:145-150,164-179,181-188,197-210,251-279 1rfu d1rfud_ D:145-150,150-159,181-188,197-210,251-279 1rfu d1rfug_ G:145-150,164-179,181-188,197-210,251-279 1rfu d1rfud_ D:145-150,164-179,181-188,197-210,251-279 1rfu d1rfuh_ H:145-150,164-179,181-188,197-210,251-279 1rfu d1rfue_ E:145-150,150-159,181-188,197-210,251-279 1rfu d1rfug_ G:145-150,150-159,181-188,197-210,251-279 1rfu d1rfuh_ H:145-150,150-159,181-188,197-210,251-279 1lhr d1lhrb_ B:145-150,164-179,181-188,197-210,251-279 1rfu d1rfua_ A:145-150,164-179,181-188,197-210,251-279 1rfu d1rfuf_ F:145-150,150-159,181-188,197-210,251-279 1rfu d1rfuc_ C:145-150,150-159,181-188,197-210,251-279 1rfu d1rfua_ A:145-150,150-159,181-188,197-210,251-279 1rfu d1rfub_ B:145-150,150-159,181-188,197-210,251-279 1lhp d1lhpb_ B:145-150,164-179,181-188,197-210,251-279 1lhr d1lhra_ A:145-150,150-159,181-188,197-208,251-279 1rfv d1rfvb_ B:145-150,164-179,181-188,197-210,251-279 2afb d2afbb1 B:189-193,194-203,235-245,248-259,295-314 1lhr d1lhrb_ B:145-150,150-159,181-188,197-210,251-279 1lhp d1lhpb_ B:145-150,150-159,181-188,197-210,251-279 1rfv d1rfvb_ B:145-150,150-159,181-188,197-210,251-279 9. d.21.1 Diaminopimelate epimerase-like duplication: consists of two similar domain swapped with C-terminal strands ! Diaminopimelate epimerase-like mixed beta-sheet folds into a barrel (n=8, S=14) around the central helix 1tm0 d1tm0b_ B:16-25,44-54,61-68,75-83,90-105 1tm0 d1tm0a_ A:16-25,44-54,61-68,75-83,90-105 1s7j d1s7ja_ A:144-150,152-159,173-181,185-193,203-219 1s7j d1s7jb_ B:144-150,152-159,173-181,185-193,203-219 2h9f d2h9fa1 A:18-26,37-49,69-77,83-92,104-119 2q9j d2q9ja2 A:157-164,171-182,189-197,200-209,217-232 2gkj d2gkja2 A:157-164,171-182,189-197,200-209,217-232 1gqz d1gqza2 A:157-164,171-182,189-197,200-209,217-232 2q9h d2q9ha2 A:157-164,171-182,189-197,200-209,217-232 2gke d2gkea2 A:157-164,171-182,189-197,200-209,217-232 1bwz d1bwza2 A:157-164,171-182,189-197,200-209,217-232 1qy9 d1qy9c1 C:18-26,31-43,46-52,57-65,72-88 1u1w d1u1wb1 B:17-24,30-42,44-52,57-65,72-84 1qy9 d1qy9a1 A:18-26,31-43,46-53,57-65,72-88 1u0k d1u0kb1 B:18-26,31-43,46-53,57-66,74-89 1tm0 d1tm0a_ A:16-25,33-45,61-68,75-83,90-105 1tm0 d1tm0b_ B:16-25,33-45,61-68,75-83,90-105 1u0k d1u0ka1 A:18-26,31-43,46-52,57-66,74-89 1sdj d1sdja1 A:18-27,31-43,46-52,57-65,72-88 1qy9 d1qy9d1 D:18-27,31-43,46-52,57-65,72-88 1u1w d1u1wa2 A:153-160,162-169,182-191,192-201,211-226 1u1w d1u1wb2 B:153-160,162-169,182-191,192-201,211-226 1qya d1qyab1 B:18-26,31-43,46-53,57-65,72-88 1u1x d1u1xa2 A:153-160,162-169,182-191,192-201,211-226 1qya d1qyaa1 A:18-26,31-43,46-53,57-65,74-88 1u1x d1u1xb2 B:153-160,162-169,182-191,192-201,211-226 1xua d1xuaa2 A:153-160,162-169,182-191,192-201,211-226 1t6k d1t6ka2 A:153-160,162-169,182-191,192-201,211-226 1qy9 d1qy9b1 B:18-27,31-43,46-53,57-65,72-88 1u1v d1u1va2 A:153-160,162-169,182-191,192-202,211-226 1xua d1xuab2 B:153-160,162-169,182-191,192-201,211-226 1xub d1xuba2 A:153-160,162-169,182-191,192-202,211-226 1bwz d1bwza1 A:10-18,26-36,43-50,57-65,76-88 1u1v d1u1va1 A:16-24,30-42,45-52,57-65,72-87 1xua d1xuab1 B:16-24,30-42,44-52,57-65,72-84 1u1x d1u1xb1 B:16-24,30-42,44-52,57-65,72-84 2gke d2gkea1 A:10-19,26-36,43-51,57-65,73-88 2gkj d2gkja1 A:10-19,26-36,43-51,57-65,73-88 1t6k d1t6ka1 A:16-24,30-42,45-52,57-65,72-84 2q9j d2q9ja1 A:10-18,26-36,43-51,57-65,76-88 1gqz d1gqza1 A:10-18,26-36,43-51,57-65,76-88 1xub d1xuba1 A:16-24,30-42,45-52,57-65,72-84 1xua d1xuaa1 A:16-24,30-42,45-52,57-65,72-84 1u1x d1u1xa1 A:16-24,30-42,45-52,57-65,72-84 1u1w d1u1wa1 A:16-24,30-42,45-52,57-65,72-84 2q9h d2q9ha1 A:10-18,26-36,43-50,57-65,76-88 1s7j d1s7jb_ B:17-26,31-43,46-54,55-64,71-87 1s7j d1s7ja_ A:17-26,31-43,46-54,55-64,71-87 2h9f d2h9fa2 A:218-224,242-261,276-284,301-309,317-331 2h9f d2h9fa2 A:218-224,242-261,276-284,301-309,333-340 13. c.109.1 PEP carboxykinase N-terminal domain PEP carboxykinase N-terminal domain contains mixed beta-sheets; topology is partly similar to that of the catalytic C-terminal domain 1khf d1khfa2 A:91-95,118-131,217-224,225-232,240-249 1nhx d1nhxa2 A:91-95,118-131,217-224,225-232,240-249 2gmv d2gmvb2 B:91-95,118-131,217-224,225-232,240-249 1khb d1khba2 A:91-95,118-131,217-224,225-232,240-249 1m51 d1m51a2 A:91-95,118-131,217-224,225-232,240-249 1khe d1khea2 A:91-95,118-131,217-224,225-232,240-249 1khg d1khga2 A:91-95,118-131,217-224,225-232,240-249 1ii2 d1ii2a2 A:47-52,70-88,162-169,170-177,180-200 1ii2 d1ii2b2 B:47-52,70-88,162-169,170-177,180-200 1oen d1oena2 A:69-73,98-114,189-196,197-204,207-227 1os1 d1os1a2 A:69-73,98-114,189-196,197-204,207-227 1k3d d1k3da2 A:69-73,98-114,189-196,197-204,207-227 1j3b d1j3bb2 B:56-61,79-98,173-180,181-188,191-211 1ayl d1ayla2 A:69-73,98-114,189-196,197-204,207-227 1aq2 d1aq2a2 A:69-73,98-114,189-196,197-204,207-227 2olq d2olqa2 A:69-73,98-115,189-196,197-204,207-227 2olr d2olra2 A:69-73,98-115,189-196,197-204,207-227 1k3c d1k3ca2 A:69-73,98-115,189-196,197-204,207-227 1xkv d1xkvb2 B:56-61,79-98,173-180,181-188,191-211 1j3b d1j3ba2 A:56-61,79-98,173-180,181-188,191-211 2py7 d2py7x2 X:69-73,98-116,189-196,197-204,207-227 2pxz d2pxzx2 X:69-73,98-116,189-196,197-204,207-227 1xkv d1xkva2 A:56-61,79-98,173-180,181-188,191-211 2pc9 d2pc9c2 C:56-61,79-98,173-180,181-188,191-211 2pc9 d2pc9d2 D:56-61,79-98,173-180,181-188,191-211 2pc9 d2pc9a2 A:56-61,79-98,173-180,181-188,191-211 2pc9 d2pc9b2 B:56-61,79-98,173-180,181-188,191-211 2gmv d2gmva2 A:91-95,118-131,217-224,225-232,247-259 2gmv d2gmvb2 B:91-95,118-131,217-224,225-232,248-259 1khf d1khfa2 A:91-95,118-131,217-224,225-232,248-259 1khe d1khea2 A:91-95,118-131,217-224,225-232,248-259 1khg d1khga2 A:91-95,118-131,217-224,225-232,248-259 1khb d1khba2 A:91-95,118-131,217-224,225-232,248-259 1m51 d1m51a2 A:91-95,118-131,217-224,225-232,248-259 1nhx d1nhxa2 A:91-95,118-131,217-224,225-232,248-259 14. d.112.1 Phoshotransferase/anion transport protein Phoshotransferase/anion transport protein beta-alpha(2)-beta(3)-alpha(3); 3 layers, alpha/beta/alpha; mixed sheet: order 1342; loop crossing 1a3a d1a3aa_ A:11-15,20-36,77-84,99-106,109-125 1a3a d1a3ad_ D:11-15,20-36,76-84,99-107,110-123 1j6t d1j6ta_ A:11-15,20-36,76-84,99-107,110-123 1a3a d1a3ac_ C:11-15,20-36,76-84,99-107,110-123 1hyn d1hyns_ S:117-124,127-143,239-248,261-271,277-292 1hyn d1hyns_ S:117-124,127-143,239-248,261-271,291-301 1hyn d1hynr_ R:117-124,127-143,239-248,261-271,291-301 1hyn d1hynp_ P:117-124,127-143,239-248,261-271,277-292 1hyn d1hynr_ R:117-124,127-143,239-248,261-271,277-292 1a3a d1a3ab_ B:11-15,20-36,77-84,99-106,109-123 1hyn d1hynp_ P:117-124,127-143,239-248,261-271,291-301 1xiz d1xizb_ B:10-16,19-35,75-85,102-110,128-138 1a6j d1a6ja_ A:18-22,27-44,83-90,105-114,114-134 1a6j d1a6jb_ B:18-24,27-44,83-91,105-115,133-143 1xiz d1xiza_ A:10-16,19-35,75-85,102-110,128-138 1hyn d1hynq_ Q:117-122,127-143,239-247,261-271,277-292 1a3a d1a3aa_ A:11-15,20-36,77-84,99-106,124-134 1a3a d1a3ab_ B:11-15,20-36,77-84,99-106,124-134 1a6j d1a6jb_ B:18-24,27-44,83-91,105-115,114-134 1a6j d1a6ja_ A:18-22,27-44,83-90,105-114,133-143 1hyn d1hynq_ Q:117-122,127-143,239-247,261-271,291-301 1a3a d1a3ad_ D:11-15,20-36,76-84,99-107,124-134 1j6t d1j6ta_ A:11-15,20-36,76-84,99-107,124-134 1a3a d1a3ac_ C:11-15,20-36,76-84,99-107,124-134 15. c.107.1 DHH phosphoesterases constituent families have similar domain organization with variable interdomain linker and spatial arrangement of the domains ! DHH phosphoesterases consists of two non-similar domains ! Domain 1 has parallel sheet of 6 strands, order 321456 ! Domain 2 has mixed sheet of 5 strands, order 12345; strands 1 & 4 are antiparallel to the rest 1ir6 d1ir6a_ A:331-337,340-356,358-364,365-371,376-385 1k23 d1k23a_ A:211-222,230-246,248-258,259-269,270-279 1k23 d1k23c_ C:211-222,230-246,248-258,259-269,270-279 1k23 d1k23b_ B:211-222,230-246,248-258,259-269,270-279 1wpp d1wppb_ B:213-224,232-248,250-260,261-271,272-281 1wpm d1wpmb_ B:211-222,230-246,248-258,259-269,270-279 1wpp d1wppa_ A:213-224,232-248,250-260,261-271,272-281 1k20 d1k20b_ B:213-223,232-248,250-260,261-271,272-281 1i74 d1i74b_ B:211-221,230-246,248-258,259-269,270-279 1i74 d1i74a_ A:211-221,230-246,248-258,259-269,270-279 1k20 d1k20a_ A:213-223,232-248,250-260,261-271,272-281 2haw d2hawb1 B:211-221,230-246,248-258,259-269,270-279 1wpm d1wpma_ A:211-221,230-246,248-258,259-269,270-279 2haw d2hawa1 A:211-221,230-246,248-258,259-269,270-279 20. c.117.1 Amidase signature (AS) enzymes Amidase signature (AS) enzymes possible duplication: the topologies of N- and C-terminal halves are similar; 3 layers: a/b/a; single mixed beta-sheet of 10 strands, order 213549A867 (A=10); strands from 5 to 9 are antiparallel to the rest 2gi3 d2gi3a1 A:61-67,142-152,155-162,198-205,206-218 1m22 d1m22b_ B:117-124,203-213,216-223,259-266,267-279 1m22 d1m22a_ A:117-124,203-213,216-223,259-266,267-279 1m21 d1m21a_ A:117-124,203-213,216-223,259-266,267-279 1m21 d1m21b_ B:117-124,203-213,216-223,259-266,267-279 1mt5 d1mt5p_ P:137-142,218-228,231-238,278-285,286-299 1mt5 d1mt5l_ L:137-142,218-228,231-238,278-285,286-299 1mt5 d1mt5d_ D:137-142,218-228,231-238,278-285,286-299 1mt5 d1mt5k_ K:137-142,218-228,231-238,278-285,286-299 2gi3 d2gi3a1 A:244-251,359-382,382-388,432-442,445-460 1ocl d1oclb_ B:57-63,132-142,145-152,188-195,196-209 1obl d1oblb_ B:57-63,132-142,145-152,188-195,196-209 1obl d1oblb_ B:221-227,311-337,337-343,382-392,395-412 1obk d1obkb_ B:221-227,311-337,337-343,382-392,395-412 1obj d1obja_ A:221-227,311-337,337-343,382-392,395-412 1obl d1obla_ A:221-227,311-337,337-343,382-392,395-412 1obk d1obka_ A:221-227,311-337,337-343,382-392,395-412 1ocm d1ocma_ A:221-227,311-337,337-343,382-392,395-412 1ock d1ocka_ A:221-227,311-337,337-343,382-392,395-412 1o9o d1o9oa_ A:221-227,311-337,337-343,382-392,395-412 1o9o d1o9ob_ B:221-227,311-337,337-343,382-392,395-412 1obi d1obia_ A:221-227,311-337,337-343,382-392,395-412 1och d1ochb_ B:221-227,311-337,337-343,382-392,395-412 1ocm d1ocmb_ B:221-227,311-337,337-343,382-392,395-412 1o9q d1o9qb_ B:221-227,311-337,337-343,382-392,395-412 1o9n d1o9nb_ B:221-227,311-337,337-343,382-392,395-412 1m22 d1m22b_ B:310-317,419-446,448-454,493-503,506-522 1obj d1objb_ B:221-227,311-337,337-343,382-392,395-412 1m22 d1m22a_ A:310-317,419-446,448-454,493-503,506-522 1och d1ocha_ A:221-227,311-337,337-343,382-392,395-412 1ocl d1oclb_ B:221-227,311-337,337-343,382-392,395-412 1o9q d1o9qa_ A:221-227,311-337,337-343,382-392,395-412 1ock d1ockb_ B:221-227,311-337,337-343,382-392,395-412 1m21 d1m21b_ B:310-317,419-446,448-454,493-503,506-522 1m21 d1m21a_ A:310-317,419-446,448-454,493-503,506-522 1o9p d1o9pb_ B:221-227,311-337,337-343,382-392,395-412 1o9n d1o9na_ A:221-227,311-337,337-343,382-392,395-412 2dqn d2dqna1 A:259-264,367-396,397-403,448-458,461-477 1obi d1obib_ B:221-227,311-337,337-343,382-391,395-412 1mt5 d1mt5n_ N:137-143,218-228,232-238,278-285,286-299 1mt5 d1mt5n_ N:325-330,440-466,468-474,545-554,557-573 2g5h d2g5ha1 A:257-264,367-396,397-403,448-458,461-477 1mt5 d1mt5b_ B:137-143,218-228,232-238,278-285,286-299 1mt5 d1mt5e_ E:137-143,218-228,232-238,278-285,286-299 2df4 d2df4a1 A:257-264,367-396,397-403,448-458,461-477 1mt5 d1mt5f_ F:137-142,218-228,232-238,278-285,286-299 1mt5 d1mt5a_ A:137-142,218-228,232-238,278-285,286-299 1mt5 d1mt5c_ C:137-142,218-228,232-238,278-285,286-299 2f2a d2f2aa1 A:258-264,367-396,397-403,448-457,461-477 1mt5 d1mt5o_ O:137-142,218-228,232-238,278-285,286-299 1mt5 d1mt5m_ M:325-330,440-466,468-474,545-554,557-573 1mt5 d1mt5j_ J:137-142,218-228,232-238,278-285,286-299 1mt5 d1mt5m_ M:137-142,218-228,232-238,278-285,286-299 1mt5 d1mt5i_ I:137-142,218-228,232-238,278-285,286-299 1mt5 d1mt5h_ H:137-142,218-228,232-238,278-285,286-299 2g5i d2g5ia1 A:258-264,367-396,397-403,448-457,461-477 1mt5 d1mt5g_ G:137-142,218-228,232-238,278-285,286-299 2g5i d2g5ia1 A:73-80,155-165,169-175,211-218,219-231 2dqn d2dqna1 A:74-79,155-165,169-175,211-218,219-231 2df4 d2df4a1 A:72-79,155-165,169-175,211-218,219-231 2f2a d2f2aa1 A:72-79,155-165,169-175,211-218,219-231 2g5h d2g5ha1 A:72-79,155-165,169-175,211-218,219-231 25. d.41.5 Molybdopterin synthase subunit MoaE alpha/beta-Hammerhead core: beta-BETA-alpha-beta-BETA-beta-alpha; contains a beta-hammerhead motif similar to that in barrel-sandwich hybrids 1nvj d1nvjd_ D:2-10,14-26,76-85,91-102,103-122 1fm0 d1fm0e_ E:2-10,14-25,76-85,92-102,103-122 1nvj d1nvje_ E:2-10,14-26,76-85,92-102,103-122 1nvj d1nvja_ A:2-10,14-26,76-85,92-102,103-122 1fma d1fmae_ E:2-10,14-26,76-85,92-102,103-122 1nvj d1nvjb_ B:2-10,14-26,76-85,92-102,103-122 1nvj d1nvjf_ F:2-10,14-26,76-85,92-102,103-122 3bii d3biie1 E:2-10,14-26,76-85,92-102,103-122 1nvj d1nvjc_ C:2-10,14-26,76-85,92-102,103-122 1nvi d1nvie_ E:2-10,14-26,76-85,91-102,103-122 28. d.340.1 CofE-like CofE-like consists of two different domains; d1: beta-alpha-beta-alpha-beta(2)-alpha-beta, mixed sheet of 5 strands, order:15234, strands 2 and 3 are parralel; d2 is inserted in d1 after strand 2 and comprises a helix-turn-helix motif and two 3-stranded sheets 2phn d2phna1 A:31-40,124-141,142-153,159-169,194-207 2phn d2phnb1 B:31-40,124-141,142-153,159-169,194-207 2g9i d2g9ia1 A:32-40,124-141,143-153,159-169,194-207 2g9i d2g9ib1 B:32-40,124-141,143-153,159-169,194-207