1. d.153.1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) N-terminal residue provides two catalytic groups, nucleophile and proton donor !
Ntn hydrolase-like 4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
1gph d1gph22 2:1-8,11-24,180-186,187-193,211-219
1gph d1gph42 4:1-8,11-24,180-186,187-193,212-219
1gph d1gph32 3:1-8,11-24,180-186,187-193,211-219
1ao0 d1ao0d2 D:1-8,11-24,180-186,187-193,212-219
1ao0 d1ao0a2 A:1-8,11-24,180-186,187-193,212-219
1ao0 d1ao0b2 B:1-8,11-24,180-186,187-193,212-219
1ao0 d1ao0c2 C:1-8,11-24,180-186,187-193,212-219
1gph d1gph12 1:1-8,11-24,180-186,187-193,211-219
1ofd d1ofdb3 B:1-9,14-29,352-358,360-366,386-395
1ofd d1ofda3 A:1-9,14-29,352-358,360-366,386-395
1lm1 d1lm1a3 A:1-9,14-29,352-358,360-366,386-394
1ofe d1ofeb3 B:1-9,14-29,352-358,360-366,386-395
1ofe d1ofea3 A:1-9,14-29,352-358,360-366,386-395
2j6h d2j6ha2 A:1-8,11-24,178-184,185-191,209-216
2bpl d2bplc2 C:1-8,11-24,178-184,185-191,209-216
2vdc d2vdcd3 D:1-9,14-32,353-359,361-367,386-396
2vdc d2vdcb3 B:1-9,14-32,353-359,361-367,386-396
1ea0 d1ea0b3 B:1-9,14-32,353-359,361-367,386-396
2vdc d2vdcf3 F:1-9,14-32,353-359,361-367,386-396
1llz d1llza3 A:1-9,14-29,352-358,360-366,388-394
1llw d1llwa3 A:1-9,14-29,352-358,360-366,388-394
2j6h d2j6hb2 B:1-8,11-24,178-184,185-191,209-216
2bpl d2bpla2 A:1-8,11-24,178-184,185-191,209-216
1jxa d1jxaa2 A:1-8,11-24,178-184,185-191,209-216
1xff d1xffb_ B:1-8,11-24,178-184,185-191,209-216
2vdc d2vdce3 E:1-9,14-32,353-359,361-367,387-396
2vdc d2vdca3 A:1-9,14-32,353-359,361-367,387-396
2vdc d2vdcc3 C:1-9,14-32,353-359,361-367,387-396
1ea0 d1ea0a3 A:1-9,14-32,353-359,361-367,387-396
1jxa d1jxab2 B:1-8,12-24,178-184,185-191,209-216
2bpl d2bplb2 B:1-8,11-24,178-184,185-191,209-216
1xfg d1xfgb_ B:1-8,11-27,178-184,185-191,209-216
1jxa d1jxac2 C:1-8,11-24,178-184,185-191,208-216
1xff d1xffa_ A:1-8,11-27,178-184,185-191,209-216
1xfg d1xfga_ A:1-8,11-27,178-184,185-191,209-216
2e0w d2e0wa1 A:43-47,504-511,552-560,562-569,574-580
2i3o d2i3od1 D:7-11,434-441,487-496,498-505,511-516
2i3o d2i3oa1 A:7-11,434-441,487-496,498-505,511-516
2i3o d2i3ob1 B:7-11,434-441,487-496,498-505,511-516
2i3o d2i3oc1 C:7-11,434-441,487-496,498-505,511-516
1ecj d1ecjd2 D:1-8,11-24,190-197,201-208,227-234
2e0w d2e0wb1 B:43-47,504-511,551-560,562-569,574-580
1q19 d1q19d2 D:4-10,12-24,127-132,134-139,182-192
1ct9 d1ct9a2 A:1-8,12-28,145-151,153-159,177-182
1q19 d1q19c2 C:4-10,12-24,127-132,134-139,182-192
1ct9 d1ct9c2 C:1-8,12-28,145-151,153-159,176-182
1ct9 d1ct9d2 D:1-8,12-28,145-151,153-159,177-182
1q15 d1q15c2 C:4-10,12-24,127-132,134-139,182-192
1q19 d1q19b2 B:4-10,12-24,127-132,134-139,182-192
1ct9 d1ct9b2 B:1-8,12-28,145-151,153-159,176-182
1ecc d1eccb2 B:1-8,11-24,189-198,200-209,227-234
1q15 d1q15a2 A:4-10,12-24,127-132,134-139,182-192
1q15 d1q15b2 B:4-10,12-24,127-132,134-139,182-192
1q19 d1q19a2 A:4-10,12-24,127-132,134-139,182-192
1q15 d1q15d2 D:4-10,12-24,127-132,134-139,182-192
1ecc d1ecca2 A:1-8,11-24,190-198,200-208,227-234
1ecj d1ecjb2 B:1-8,11-24,190-198,200-208,227-234
1ecj d1ecjc2 C:1-8,11-24,190-198,200-208,227-234
1ecb d1ecbc2 C:1-8,11-24,190-198,200-208,227-234
1ecb d1ecba2 A:1-8,11-24,190-198,200-208,227-234
1ecf d1ecfb2 B:1-8,11-24,190-198,200-208,226-234
1ecg d1ecgb2 B:1-8,11-24,190-198,200-208,226-234
1ecb d1ecbb2 B:1-8,11-24,190-198,200-208,227-234
1ecb d1ecbd2 D:1-8,11-24,190-198,200-208,226-234
1ecf d1ecfa2 A:1-8,11-24,190-198,200-208,226-234
1ecg d1ecga2 A:1-8,11-24,190-198,200-208,226-234
1ecj d1ecja2 A:1-8,11-24,190-198,200-208,226-234
2. d.43.1 Elongation factor Ts (EF-Ts), dimerisation domain comprises two structural repeats of this fold !
EF-Ts domain-like beta(2)-alpha(n)-beta; 2 layers a/b; antiparallel sheet: 123
1xb2 d1xb2b2 B:127-137,144-167,171-178,209-221,318-328
1xb2 d1xb2b2 B:127-137,144-167,171-178,209-221,223-232
3. d.58.7 RNA-binding domain, RBD
Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
1cvj d1cvjg1 G:11-17,23-35,73-78,79-87,124-131
1cvj d1cvjd1 D:11-17,23-35,73-78,79-87,124-131
1cvj d1cvjh1 H:11-17,23-35,73-78,79-87,124-131
1cvj d1cvje1 E:11-17,23-35,73-78,79-87,124-131
1cvj d1cvjb1 B:11-17,23-35,73-78,79-87,124-131
1b7f d1b7fb1 B:125-131,137-149,187-192,193-201,236-243
4. b.62.1 Cyclophilin-like
Cyclophilin-like barrel, closed; n=8, S=10; complex topology
2rmc d2rmcc_ C:48-59,63-76,130-135,160-169,204-208
5. d.181.1 Insert subdomain of RNA polymerase alpha subunit
Insert subdomain of RNA polymerase alpha subunit unusual fold; contains a left-handed beta-alpha-beta unit
2cw0 d2cw0a2 A:49-59,74-86,95-105,134-148,149-153
List of motif hits that are not present in SCOP but are found in PDB for pattern ID: 732 (enumeration index: query1260.1406.2537) of S5
2we8 A:21-32,56-74,76-83,97-107,126-135
2we8 B:21-29,57-74,76-81,99-107,126-136
2we7 A:21-32,57-74,76-82,97-107,126-135
2we7 B:21-29,57-74,76-81,99-107,143-149
2we7 B:21-29,57-74,76-81,99-107,126-135
2x2i B:966-974,999-1007,1010-1017,1018-1027,1032-1038
2x2i C:966-974,999-1007,1010-1017,1018-1027,1032-1038
2x2i A:966-974,999-1007,1010-1017,1018-1027,1032-1038
2x2i D:966-974,999-1007,1010-1017,1018-1027,1032-1038
3ooj A:1-8,11-27,178-184,185-191,210-216
3ooj H:1-8,11-27,178-184,185-191,209-216
3ooj E:1-8,11-27,178-184,185-191,209-216
3ooj C:1-8,11-27,178-184,185-191,210-216
3ooj D:1-8,11-27,178-184,185-191,209-216
3ooj G:1-8,11-27,178-184,185-191,209-216
3ooj B:1-8,11-27,178-184,185-191,209-216
3ooj F:1-8,11-27,178-184,185-191,209-216
2e1t B:41-53,124-133,149-157,159-169,393-397
2x2h D:966-974,999-1007,1010-1017,1018-1027,1032-1038
2x2h C:966-974,999-1007,1010-1017,1018-1027,1032-1038
2x2h B:966-974,999-1007,1010-1017,1018-1027,1032-1038
2x2h A:966-974,999-1007,1010-1017,1018-1027,1032-1038
3on5 A:16-27,52-69,71-79,93-103,123-132
3on5 B:16-26,52-69,71-77,95-103,122-132
2x2j D:966-974,999-1007,1010-1017,1018-1027,1032-1038
2x2j C:966-974,999-1007,1010-1017,1018-1027,1032-1038
2x2j B:966-974,999-1007,1010-1017,1018-1027,1032-1038
2x2j A:966-974,999-1007,1010-1017,1018-1027,1032-1038
3igy B:53-59,432-458,459-467,500-508,513-517