1. d.220.1 Metal cation-transporting ATPase, ATP-binding domain N
Metal cation-transporting ATPase, ATP-binding domain N unusual fold; core: beta-alpha(2)-beta(3)-alpha(2)-beta(2); 6-stranded antiparallel beta-sheet, order: 165432
1wpg d1wpgc3 C:491-500,510-517,518-525,538-555,559-568
1wpg d1wpgb3 B:491-500,510-517,518-525,538-555,559-568
1t5s d1t5sa3 A:491-500,510-517,518-525,538-555,559-568
3b9r d3b9rb3 B:491-500,509-517,518-525,538-555,559-568
1su4 d1su4a3 A:491-500,509-517,518-525,538-555,559-568
1wpg d1wpgd3 D:491-500,509-517,518-525,538-555,559-568
1wpg d1wpga3 A:491-500,509-517,518-525,538-555,559-568
1iwo d1iwoa3 A:492-501,510-517,518-525,538-555,559-568
1iwo d1iwob3 B:492-501,510-517,518-525,538-555,559-568
2zbe d2zbea3 A:491-500,509-517,517-525,538-555,559-568
2zbe d2zbeb3 B:491-500,509-517,517-525,538-555,559-568
1vfp d1vfpb3 B:492-500,510-517,518-525,538-555,559-568
1vfp d1vfpa3 A:492-500,510-517,518-525,538-555,559-568
2zbf d2zbfa3 A:491-500,509-517,517-525,538-555,559-568
1t5t d1t5ta3 A:492-500,510-517,518-525,538-555,559-568
3b9b d3b9ba3 A:492-500,510-517,517-525,538-555,559-568
3b9r d3b9ra3 A:492-500,509-517,518-525,538-555,559-568
2zbg d2zbga3 A:492-500,509-517,518-525,538-555,559-568
1xp5 d1xp5a3 A:492-500,509-517,518-525,538-555,559-568
2zbd d2zbda3 A:492-500,509-517,518-525,538-555,559-568
2a29 d2a29a1 A:381-389,390-397,398-409,413-427,428-436
2a00 d2a00a1 A:381-389,390-397,398-409,413-427,428-436
1kju d1kjua3 A:492-499,510-517,517-525,538-556,559-568
1u7q d1u7qa_ A:381-389,390-397,397-409,413-427,428-436
1svj d1svja_ A:381-389,390-397,397-409,413-427,428-436
2b8e d2b8eb2 B:491-496,497-502,503-510,514-528,529-537
2b8e d2b8ec2 C:491-496,497-502,502-510,514-528,529-537
1mo8 d1mo8a_ A:488-495,502-509,510-519,531-546,552-560
2b8e d2b8ea2 A:491-496,497-502,502-510,514-528,529-537
1q3i d1q3ia_ A:481-488,495-503,503-511,524-542,543-553
2. d.145.1 FAD-binding/transporter-associated domain-like
FAD-binding/transporter-associated domain-like consists of two alpha+beta subdomains
1hsk d1hska1 A:103-108,109-115,118-130,132-140,197-206
1vdv d1vdva6 A:289-294,295-301,304-319,324-337,402-411
3b9j d3b9jj2 J:289-294,295-301,304-319,324-337,402-411
3b9j d3b9jb2 B:289-294,295-301,304-319,324-337,402-411
1v97 d1v97b6 B:289-294,295-301,304-319,324-337,402-411
1v97 d1v97a6 A:289-294,295-301,304-319,324-337,402-411
1fo4 d1fo4a6 A:289-294,295-301,304-320,324-337,402-411
1fiq d1fiqb2 B:289-294,295-301,304-319,324-337,402-411
1n5x d1n5xb6 B:289-293,295-301,304-320,324-337,402-411
1n5x d1n5xa6 A:289-293,295-301,304-320,324-337,402-411
1n62 d1n62f2 F:62-67,68-74,77-85,91-102,164-174
1zxi d1zxic2 C:62-67,68-74,77-85,91-102,164-174
1n60 d1n60f2 F:62-67,68-74,77-85,91-102,164-174
1n63 d1n63f2 F:62-67,68-74,77-85,91-102,164-174
1zxi d1zxif2 F:62-67,68-74,77-85,91-102,164-174
1n61 d1n61f2 F:62-67,68-74,77-85,91-102,164-174
1n5w d1n5wf2 F:62-67,68-74,77-85,91-102,164-174
3. c.81.1 Formate dehydrogenase/DMSO reductase, domains 1-3 molybdopterine enzyme !
Formate dehydrogenase/DMSO reductase, domains 1-3 contains of two similar intertwined domains related by pseudo dyad; duplication ! core: 3 layers: a/b/a; parallel beta-sheet of 5 strands, order 32451
1vle d1vleu2 U:547-554,571-579,611-624,630-638,638-642
1ti2 d1ti2a2 A:547-554,571-579,611-624,630-638,638-642
1vle d1vlew2 W:547-554,571-579,611-624,630-638,638-642
1ti2 d1ti2c2 C:547-554,571-579,611-624,630-638,638-642
1vlf d1vlfu2 U:547-554,571-579,611-624,630-638,638-642
1ti4 d1ti4c2 C:547-554,571-579,611-624,630-638,638-642
1vle d1vles2 S:547-554,571-579,611-624,630-638,638-642
1ti6 d1ti6c2 C:547-554,571-579,611-624,630-638,638-642
1vlf d1vlfs2 S:547-554,571-579,611-624,630-638,638-642
1ti4 d1ti4k2 K:547-554,571-579,611-624,630-638,638-642
1ti2 d1ti2k2 K:547-554,571-579,611-624,630-638,638-642
1vlf d1vlfw2 W:547-554,571-579,611-624,630-638,638-642
1vle d1vleo2 O:547-554,571-579,611-624,630-638,638-642
1ti2 d1ti2i2 I:547-554,571-579,611-624,630-638,638-642
1vld d1vldq2 Q:547-554,571-579,611-624,630-638,638-642
1vlf d1vlfq2 Q:547-554,571-579,611-624,630-638,638-642
1ti4 d1ti4e2 E:547-554,571-579,611-624,630-638,638-642
1vle d1vlem2 M:547-554,571-579,611-624,630-638,638-642
1vle d1vleq2 Q:547-554,571-579,611-624,630-638,638-642
1ti4 d1ti4a2 A:547-554,571-579,611-624,630-638,638-642
1ti6 d1ti6e2 E:547-554,571-579,611-624,630-638,638-642
1ti2 d1ti2g2 G:547-554,571-579,611-624,630-638,638-642
1ti4 d1ti4i2 I:547-554,571-579,611-624,630-638,638-642
1vlf d1vlfo2 O:547-554,571-579,611-624,630-638,638-642
1ti6 d1ti6a2 A:547-554,571-579,611-624,630-638,638-642
1vld d1vldo2 O:547-554,571-579,611-624,630-638,638-642
1vlf d1vlfm2 M:547-554,571-579,611-624,630-638,638-642
1vld d1vldw2 W:547-554,571-579,611-624,630-638,638-642
1ti6 d1ti6k2 K:547-554,571-579,611-624,630-638,638-642
1vld d1vldm2 M:547-554,571-579,611-624,630-638,638-642
1ti2 d1ti2e2 E:547-554,571-579,611-624,630-638,638-642
1ti6 d1ti6i2 I:547-554,571-579,611-624,630-638,638-642
1vld d1vldu2 U:547-554,571-579,611-624,630-638,638-642
1vld d1vlds2 S:546-554,571-579,611-624,630-638,638-642
1e61 d1e61a2 A:480-488,492-501,533-553,558-566,566-570
1e60 d1e60c2 C:480-488,492-501,533-553,558-566,566-570
4dmr d4dmra2 A:480-488,492-501,533-553,558-566,566-570
1e18 d1e18a2 A:480-488,492-501,533-553,558-566,566-570
1dmr d1dmra2 A:480-488,492-501,533-553,558-566,566-570
1e5v d1e5va2 A:480-488,492-501,533-553,558-566,566-570
1eu1 d1eu1a2 A:480-488,492-501,533-553,558-566,566-570
1e5v d1e5vc2 C:480-488,492-501,533-553,558-566,566-570
3dmr d3dmra2 A:480-488,492-501,533-553,558-566,566-570
1e61 d1e61c2 C:480-488,492-501,533-553,558-566,566-570
4. d.250.1 Folate-binding domain some topological similarity to Formylmethanofuran:tetrahydromethanopterin formyltransferase !
Folate-binding domain duplication: consists of two beta(2)-alpha-beta(3)-alpha subdomains swapped with the first strands
1vlo d1vloa2 A:43-50,141-150,150-160,161-169,193-201
5. d.36.1 Chalcone isomerase
Chalcone isomerase beta(3)-alpha(2)-beta-alpha(2)-beta3; 2 layers alpha/beta; antiparallel sheet: order 1234567
1eyq d1eyqb_ B:42-56,89-98,102-122,125-143,147-156
1eyq d1eyqa_ A:42-56,89-98,102-122,125-143,147-156
1jx1 d1jx1f_ F:46-56,89-99,102-122,125-142,145-156
1jx0 d1jx0a_ A:42-56,89-98,102-122,125-143,147-156
1jep d1jepb_ B:42-56,89-98,102-122,125-142,147-156
1jx1 d1jx1b_ B:42-56,89-98,102-122,125-142,147-156
1fm7 d1fm7b_ B:42-56,89-98,102-122,125-142,147-156
1fm7 d1fm7a_ A:42-56,89-98,102-122,125-142,147-156
1jep d1jepa_ A:42-56,89-98,102-122,125-142,147-156
1eyp d1eypa_ A:42-56,89-98,102-122,125-142,147-156
1jx1 d1jx1a_ A:43-56,89-98,102-122,125-141,147-156
1fm8 d1fm8a_ A:42-56,89-98,102-122,125-142,147-156
1fm8 d1fm8b_ B:42-56,89-99,102-122,125-142,145-156
1jx1 d1jx1c_ C:42-56,89-99,102-122,125-142,145-156
6. d.142.1 Glutathione synthetase ATP-binding domain-like
ATP-grasp Consists of two subdomains with different alpha+beta folds ! shares functional and structural similarities with the PIPK and protein kinase superfamilies
1vbg d1vbga3 A:5-11,43-48,63-82,202-220,238-245
1vbh d1vbha3 A:5-11,43-48,63-82,202-220,238-245
1kc7 d1kc7a3 A:4-8,38-43,58-77,199-217,235-242
1kbl d1kbla3 A:4-8,38-43,58-77,199-217,235-242
1ggo d1ggoa3 A:4-8,38-43,58-77,199-217,235-242
1dik d1dika3 A:4-8,38-43,58-77,199-217,235-242
2dik d2dika3 A:4-8,38-43,58-77,199-217,235-242
1jde d1jdea3 A:4-8,39-43,58-77,199-217,235-242
2r82 d2r82a3 A:4-8,38-43,58-77,199-217,235-242
7. i.18.1 Membrane ion ATPase
Membrane ion ATPase
1mhs d1mhsb_ B:457-464,469-476,476-484,491-509,510-518
1mhs d1mhsa_ A:457-464,469-476,476-484,491-509,510-518
8. d.197.1 Protein-L-isoaspartyl O-methyltransferase, C-terminal domain
Protein-L-isoaspartyl O-methyltransferase, C-terminal domain beta-alpha-beta(4)-alpha-beta(2); 3 layers: beta/alpha/beta; buried helix
1dl5 d1dl5a2 A:180-191,193-203,236-249,280-294,301-307
1dl5 d1dl5b2 B:180-191,193-203,236-249,280-294,301-307
9. e.28.1 Reovirus inner layer core protein p3
Reovirus inner layer core protein p3 large protein without apparent domain division; has a number of all-alpha regions and one all beta domain near the C-end
2btv d2btvb_ B:89-94,99-106,167-175,176-191,857-863
10. b.23.3 Acetamidase/Formamidase-like decorated fold with additional structures; contains extra C-terminal alpha+beta subdomain: beta(2)-alpha(2)-beta(2): antiparallel beta-sheet, order 1243 !
CUB-like sandwich, 10 strands in 2 sheets; jelly-roll
2f4l d2f4ld1 D:207-213,214-223,224-245,247-258,270-279
2f4l d2f4lb1 B:207-213,214-223,224-245,247-258,270-279
2f4l d2f4la1 A:207-213,214-223,224-245,247-258,270-279
2f4l d2f4lc1 C:208-213,214-223,224-245,247-258,270-279
11. a.117.1 Ras GEF
Ras GEF multihelical
1nvw d1nvws_ S:585-589,600-605,605-615,620-636,952-958
1nvu d1nvus_ S:585-589,600-605,605-615,620-636,952-958
1nvv d1nvvs_ S:585-589,600-605,605-615,620-636,952-958
1bkd d1bkds_ S:585-589,600-605,605-615,620-636,952-958
1xd4 d1xd4b2 B:585-589,600-605,605-615,620-636,952-958
List of motif hits that are not present in SCOP but are found in PDB for pattern ID: 661 (enumeration index: query1306) of S5
3ar6 A:491-500,509-517,518-525,538-555,559-568
3nam A:492-500,509-517,518-525,538-555,559-568
2xzb A:496-506,509-519,519-527,540-558,559-569
3b9t B:384-390,391-399,420-441,443-454,467-475
3b9t C:384-390,391-399,420-441,443-454,467-475
3b9t A:384-390,391-399,420-441,443-454,467-475
3b9t D:384-390,391-399,420-441,443-454,467-475
3a8j A:42-49,140-149,149-159,160-168,192-200
3a8j D:42-49,140-149,149-160,160-168,192-200
3a8j B:42-49,140-149,149-159,160-168,192-200
3a8j C:42-49,140-149,149-160,160-168,192-200
2uva L:1132-1138,1140-1148,1156-1166,1170-1179,1200-1208
2uva I:1132-1138,1140-1148,1156-1166,1170-1179,1200-1208
2uva J:1132-1138,1140-1148,1156-1166,1170-1179,1200-1208
2uva J:1132-1138,1140-1148,1156-1166,1190-1197,1200-1208
2uva G:1132-1138,1140-1148,1156-1166,1190-1197,1200-1208
2uva K:1132-1138,1140-1148,1156-1166,1190-1197,1200-1208
2uva H:1132-1138,1140-1148,1156-1166,1170-1179,1200-1208
2uva H:1132-1138,1140-1148,1156-1166,1190-1197,1200-1208
2uva I:1132-1138,1140-1148,1156-1166,1190-1197,1200-1208
2uva L:1132-1138,1140-1148,1156-1166,1190-1197,1200-1208
2uva K:1132-1138,1140-1148,1156-1166,1170-1179,1200-1208
2uva G:1132-1138,1140-1148,1156-1166,1170-1179,1200-1208
3eub K:289-294,295-301,304-320,324-337,402-411
3eub B:289-294,295-301,304-320,324-337,402-411
2c8k A:492-500,509-517,518-525,538-556,559-568
3n23 A:480-490,493-503,503-511,524-542,543-553
3n23 C:480-490,493-503,503-511,524-542,543-553
3n5k B:492-500,509-517,517-525,538-555,559-568
3n5k A:491-500,510-517,518-525,538-555,559-568
2e1q A:289-294,295-301,304-319,324-337,402-411
2e1q C:289-294,295-301,304-319,324-337,402-411
2e1q D:289-294,295-301,304-320,324-337,402-411
2e1q B:289-294,295-301,304-320,324-337,402-411
2c8l A:491-500,509-517,517-525,538-556,559-568
2dqs A:491-500,509-517,517-525,538-556,559-568
3ar8 A:492-500,509-517,518-525,538-555,559-568
3a1c B:491-496,497-502,503-510,514-528,529-537
3amz A:289-294,295-301,304-319,324-337,402-411
3amz B:289-294,295-301,304-319,324-337,402-411
2ols A:5-9,43-48,97-116,150-167,186-193
3ar4 A:491-500,509-517,517-525,538-556,559-568
3n8g A:491-500,510-517,518-525,538-555,559-568
2c9m B:491-500,509-517,518-525,538-555,559-568
2c9m A:491-500,509-517,518-525,538-555,559-568
3ar7 A:491-500,509-517,518-525,538-555,559-568
3j08 A:491-496,497-502,503-510,514-528,529-537
3j08 B:491-496,497-502,503-510,514-528,529-537
2x0s A:5-10,43-48,62-81,203-221,239-246
3fps A:491-500,510-517,518-525,538-555,559-568
3ar5 A:491-500,510-517,518-525,538-555,559-568
3ar2 A:492-500,510-517,518-525,538-555,559-568
3nvy B:289-294,295-301,304-319,324-337,402-411
3a8i A:42-49,140-149,149-159,160-168,192-200
3a8i D:42-49,140-149,149-160,160-168,192-200
3a8i B:42-49,140-149,149-159,160-168,192-200
3a8i C:42-49,140-149,149-160,160-168,192-200
3nvz B:289-294,295-301,304-319,324-337,402-411
3a18 B:29-34,141-147,171-180,285-296,316-327
3a18 A:29-34,141-147,171-180,285-296,316-327
3a18 C:29-34,141-147,171-180,285-296,316-327
3a18 D:29-34,141-147,171-180,285-296,316-327
3an1 A:288-293,294-300,303-318,323-336,401-410
3nrz B:289-294,295-301,304-319,324-337,402-411
3nal A:491-501,509-517,518-525,538-555,559-568
3kdp C:481-488,495-503,503-512,524-542,543-553
3kdp A:481-488,495-503,503-512,524-542,543-553
2uvc I:1132-1139,1140-1148,1156-1166,1170-1179,1200-1208
2uvc G:1132-1139,1140-1148,1156-1166,1170-1179,1200-1208
2uvc H:1132-1139,1140-1148,1156-1166,1190-1197,1200-1208
2uvc I:1132-1139,1140-1148,1156-1166,1190-1197,1200-1208
2uvc K:1132-1139,1140-1148,1156-1166,1190-1197,1200-1208
2uvc L:1132-1139,1140-1148,1156-1166,1170-1179,1200-1208
2uvc H:1132-1139,1140-1148,1156-1166,1170-1179,1200-1208
2uvc L:1132-1139,1140-1148,1156-1166,1190-1197,1200-1208
2uvc J:1132-1139,1140-1148,1156-1166,1170-1179,1200-1208
2uvc K:1132-1139,1140-1148,1156-1166,1170-1179,1200-1208
2uvc J:1132-1139,1140-1148,1156-1166,1190-1197,1200-1208
2uvc G:1132-1139,1140-1148,1156-1166,1190-1197,1200-1208
3b8e A:479-488,495-503,503-511,524-542,543-553
3b8e C:479-488,495-503,503-511,524-542,543-553
3nan A:492-500,509-517,518-525,538-555,559-568
3bdj A:289-294,295-301,304-319,324-337,402-411
2kmx A:1117-1125,1177-1184,1185-1192,1196-1210,1211-1219
2koy A:69-76,88-96,95-104,107-121,121-130
2oa0 A:491-500,510-517,517-526,538-556,559-568
3hrd C:61-66,67-73,76-84,90-100,167-176
3ixz A:495-504,511-519,519-527,540-558,559-569
3ar9 A:492-500,509-517,517-525,538-555,559-568
3fgo B:491-500,509-517,518-525,538-555,559-568
3fgo A:492-500,510-517,517-525,538-555,559-568
3rfu B:493-499,502-507,508-516,519-533,534-542
3rfu D:493-499,502-507,508-516,519-533,534-542
3rfu C:493-499,502-507,508-516,519-533,534-542
3rfu A:493-499,502-507,508-516,519-533,534-542
2ear A:492-500,510-517,517-525,538-555,559-568
2zxe A:487-497,500-510,510-518,531-549,550-560
2ljw A:18-26,27-35,46-65,65-77,86-91
3sr6 B:289-294,295-301,304-319,324-337,402-411
3ar3 A:491-500,509-517,518-525,538-555,559-568
3a15 D:29-34,141-147,171-180,285-296,316-327
3a15 A:29-34,141-147,171-180,285-296,316-327
3a15 C:29-34,141-147,171-180,285-296,316-327
3a15 B:29-34,141-147,171-180,285-296,316-327
2o9j A:492-500,509-517,517-525,538-555,559-568
3etr M:289-294,295-301,304-319,324-337,402-411
3b8c B:405-413,417-424,425-432,436-454,455-466
3b8c A:405-413,417-424,425-432,436-454,455-466
3gwi A:450-458,461-470,470-478,491-509,510-522
3a17 B:29-34,141-147,171-180,285-296,316-327
3a17 A:29-34,141-147,171-180,285-296,316-327
3a17 G:29-34,141-147,171-180,285-296,316-327
3a17 F:29-34,141-147,171-180,285-296,316-327
3a17 D:29-34,141-147,171-180,285-296,316-327
3a17 C:29-34,141-147,171-180,285-296,316-327
3a17 E:29-34,141-147,171-180,285-296,316-327
3a17 H:29-34,141-147,171-180,285-296,316-327
3i99 A:71-90,91-100,102-114,115-122,184-196
3a1d B:491-496,497-502,503-510,514-528,529-537
2eas A:493-500,510-517,517-525,538-555,559-568
3n2f C:480-490,493-503,503-511,524-542,543-553
3n2f A:480-491,492-503,503-511,524-542,543-553
3nvw B:289-294,295-301,304-319,324-337,402-411
2eat A:491-500,510-517,518-525,538-555,559-568
3ba6 A:491-500,510-517,517-525,538-555,559-568
3tek B:10-21,22-36,50-69,82-109,115-127
3tek B:10-21,22-36,50-69,68-82,115-127
3tek A:10-21,22-36,50-69,68-82,115-127
3tek A:10-21,22-36,50-69,82-109,115-127
2voy J:491-496,497-502,502-510,514-528,529-537
2by4 A:492-500,510-516,517-525,538-555,559-568
3j09 A:491-496,497-502,503-510,514-528,529-537
3j09 B:491-496,497-502,503-510,514-528,529-537
2c88 A:492-500,509-517,517-525,538-556,559-568
2ckj C:289-294,295-301,304-319,324-338,402-411
2ckj D:289-294,295-301,304-319,324-338,402-411
2ckj A:289-294,295-301,304-319,324-338,402-411
2ckj B:289-294,295-301,304-319,324-338,402-411
3tkk A:217-223,224-233,234-255,257-268,280-288
3tkk C:217-223,224-233,234-254,257-268,280-288
3tkk D:217-223,224-233,234-254,257-268,280-288
2eau A:491-500,510-517,517-525,538-556,559-568
3tx1 A:85-90,91-97,100-112,114-122,179-188
3fpb A:492-500,509-517,518-525,538-555,559-568
3a3y A:487-497,500-510,510-518,531-549,550-560
3a8k A:42-49,140-149,149-159,160-168,192-200
3a8k B:42-49,140-149,149-159,160-168,192-200
3a8k C:42-49,140-149,149-160,160-168,192-200
3a8k D:42-49,140-149,149-160,160-168,192-200
3a16 A:29-34,141-147,171-180,285-296,316-327
3a16 C:29-34,141-147,171-180,285-296,316-327
3a16 D:29-34,141-147,171-180,285-296,316-327
3a16 B:29-34,141-147,171-180,285-296,316-327
2agv A:491-500,509-517,518-525,538-556,559-568
2agv B:491-500,509-517,518-525,538-556,559-568
2yfy A:491-500,509-517,517-525,538-555,559-568
2kmv A:1117-1125,1177-1184,1184-1192,1196-1210,1211-1219