1. d.141.1 Ribosomal protein L6
Ribosomal protein L6 consists of two beta-sheets and one alpha-helix packed around single core
2qam d2qamg2 G:83-89,93-99,100-106,111-116,136-152
2qao d2qaog2 G:83-89,93-99,100-106,111-116,136-152
2qbe d2qbeg2 G:81-90,93-99,100-106,112-116,136-152
2qbg d2qbgg2 G:81-90,93-99,100-106,112-116,136-152
1vqn d1vqne2 E:79-88,93-99,100-106,113-118,137-153
3dll d3dlle1 E:85-90,94-100,101-107,112-117,137-153
1vql d1vqle2 E:79-88,93-99,100-106,113-118,137-153
1yjw d1yjwe2 E:79-88,93-99,100-106,113-118,137-153
2otj d2otje2 E:79-88,93-99,100-106,113-118,137-153
1vq9 d1vq9e2 E:79-88,93-99,100-106,113-118,137-153
1kc8 d1kc8g2 G:79-88,93-99,100-106,113-118,137-153
1q82 d1q82g2 G:79-88,93-99,100-106,113-118,137-153
1k8a d1k8ag2 G:79-88,93-99,100-106,113-118,137-153
1vqk d1vqke2 E:79-88,93-99,100-106,113-118,137-153
1n8r d1n8rg2 G:79-88,93-99,100-106,113-118,137-153
1s72 d1s72e2 E:79-88,93-99,100-106,113-118,137-153
1yhq d1yhqe2 E:79-88,93-99,100-106,113-118,137-153
1jj2 d1jj2e2 E:79-88,93-99,100-106,113-118,137-153
1m90 d1m90g2 G:79-88,93-99,100-106,113-118,137-153
1k9m d1k9mg2 G:79-88,93-99,100-106,113-118,137-153
1k73 d1k73g2 G:79-88,93-99,100-106,113-118,137-153
1kqs d1kqse2 E:79-88,93-99,100-106,113-118,137-153
1kd1 d1kd1g2 G:79-88,93-99,100-106,113-118,137-153
1m1k d1m1kg2 G:79-88,93-99,100-106,113-118,137-153
1yij d1yije2 E:79-88,93-99,100-106,113-118,137-153
1qvf d1qvfe2 E:79-88,93-99,100-106,113-118,137-153
1nji d1njig2 G:79-88,93-99,100-106,113-118,137-153
1ffk d1ffk12 1:79-88,93-99,100-106,113-118,137-153
1q81 d1q81g2 G:79-88,93-99,100-106,113-118,137-153
1vqp d1vqpe2 E:79-88,93-99,100-106,113-118,137-153
1q7y d1q7yg2 G:79-88,93-99,100-106,113-118,137-153
1vqm d1vqme2 E:79-88,93-99,100-106,113-118,137-153
1yit d1yite2 E:79-88,93-99,100-106,113-118,137-153
1vq7 d1vq7e2 E:79-88,93-99,100-106,113-118,137-153
1yi2 d1yi2e2 E:79-88,93-99,100-106,113-118,137-153
1vq8 d1vq8e2 E:79-88,93-99,100-106,113-118,137-153
1vq5 d1vq5e2 E:79-88,93-99,100-106,113-118,137-153
1qvg d1qvge2 E:79-88,93-99,100-106,113-118,137-153
1q86 d1q86g2 G:79-88,93-99,100-106,113-118,137-153
2otl d2otle2 E:79-88,93-99,100-106,113-118,137-153
1vqo d1vqoe2 E:79-88,93-99,100-106,113-118,137-153
1vq6 d1vq6e2 E:79-88,93-99,100-106,113-118,137-153
1yjn d1yjne2 E:79-88,93-99,100-106,113-118,137-153
1vq4 d1vq4e2 E:79-88,93-99,100-106,113-118,137-153
1yj9 d1yj9e2 E:79-88,93-99,100-106,113-118,137-153
2j28 d2j28g2 G:81-90,93-99,100-106,111-116,136-152
2awb d2awbg2 G:81-90,93-99,100-106,111-116,136-152
2j01 d2j01h2 H:82-90,94-100,101-107,112-117,137-153
2j03 d2j03h2 H:82-90,94-100,101-107,112-117,137-153
1vs6 d1vs6g2 G:81-90,93-99,100-106,111-116,136-152
1vs8 d1vs8g2 G:81-90,93-99,100-106,111-116,136-152
2qov d2qovg2 G:81-90,93-99,100-106,111-116,136-152
2qox d2qoxg2 G:81-90,93-99,100-106,111-116,136-152
2b9n d2b9nh2 H:81-90,93-99,100-106,111-115,136-152
2b9p d2b9ph2 H:81-90,93-99,100-106,111-115,136-152
2b66 d2b66h2 H:81-90,93-99,100-106,111-115,136-152
1yl3 d1yl3h2 H:81-90,93-99,100-106,111-115,136-152
2vhn d2vhng2 G:81-90,93-99,100-106,111-116,136-152
3bbx d3bbxg2 G:81-89,93-99,100-106,111-116,136-152
2aw4 d2aw4g2 G:81-89,93-99,100-106,111-116,136-152
2rdo d2rdog2 G:81-89,93-99,100-106,111-116,136-152
2vhm d2vhmg2 G:81-90,92-99,100-107,111-116,136-152
2z4l d2z4lg2 G:81-89,94-99,100-105,111-116,136-152
2z4n d2z4ng2 G:81-89,94-99,100-105,111-116,136-152
3d5b d3d5bh2 H:82-91,94-100,101-107,112-117,137-153
3d5d d3d5dh2 H:82-91,94-100,101-107,112-117,137-153
1rl6 d1rl6a2 A:81-90,93-99,100-106,111-115,136-152
3df4 d3df4g2 G:81-90,94-99,100-105,111-116,136-152
2hgj d2hgjh2 H:85-91,93-100,101-107,113-117,137-153
3df2 d3df2g2 G:81-90,94-99,100-105,111-116,136-152
3cf5 d3cf5e1 E:85-91,94-100,101-107,112-117,137-153
2v49 d2v49h2 H:83-90,94-100,101-107,112-117,137-153
2v47 d2v47h2 H:83-90,94-100,101-107,112-117,137-153
2i2v d2i2vg2 G:81-89,93-99,100-106,111-116,136-152
2i2t d2i2tg2 G:81-89,93-99,100-106,111-116,136-152
2hgu d2hguh2 H:85-91,94-100,101-107,113-117,137-153
2zjq d2zjqe1 E:85-91,94-100,101-107,112-116,137-153
2zjr d2zjre1 E:85-91,94-100,101-107,112-116,137-153
2zjp d2zjpe1 E:85-91,94-100,101-107,112-116,137-153
2hgq d2hgqh2 H:86-91,94-98,101-107,113-117,137-153
2hgq d2hgqh1 H:7-11,15-21,22-29,30-36,58-82
2qp1 d2qp1g2 G:81-88,94-99,100-105,111-116,136-152
2qoz d2qozg2 G:81-88,94-99,100-105,111-116,136-152
1ffk d1ffk11 1:1-7,11-17,18-25,26-33,55-79
2hgu d2hguh1 H:7-11,15-21,22-29,30-37,58-82
1vqo d1vqoe1 E:1-7,11-17,18-25,26-33,55-79
1vq9 d1vq9e1 E:1-7,11-17,18-25,26-33,55-79
1vqk d1vqke1 E:1-7,11-17,18-25,26-33,55-79
2hgj d2hgjh1 H:7-11,15-21,22-29,30-37,58-82
1yhq d1yhqe1 E:1-7,11-17,18-25,26-33,55-79
1vq8 d1vq8e1 E:1-7,11-17,18-25,26-33,55-79
1yj9 d1yj9e1 E:1-7,11-17,18-25,26-33,55-79
1vqp d1vqpe1 E:1-7,11-17,18-25,26-33,55-79
1vql d1vqle1 E:1-7,11-17,18-25,26-33,55-79
1q7y d1q7yg1 G:1-7,11-17,18-25,26-33,55-79
1vqn d1vqne1 E:1-7,11-17,18-25,26-33,55-79
1s72 d1s72e1 E:1-7,11-17,18-25,26-33,55-79
1m90 d1m90g1 G:1-7,11-17,18-25,26-33,55-79
1kd1 d1kd1g1 G:1-7,11-17,18-25,26-33,55-79
1vq7 d1vq7e1 E:1-7,11-17,18-25,26-33,55-79
1k9m d1k9mg1 G:1-7,11-17,18-25,26-33,55-79
1jj2 d1jj2e1 E:1-7,11-17,18-25,26-33,55-79
1vqm d1vqme1 E:1-7,11-17,18-25,26-33,55-79
1yij d1yije1 E:1-7,11-17,18-25,26-33,55-79
1kc8 d1kc8g1 G:1-7,11-17,18-25,26-33,55-79
1k73 d1k73g1 G:1-7,11-17,18-25,26-33,55-79
1kqs d1kqse1 E:1-7,11-17,18-25,26-33,55-79
2otl d2otle1 E:1-7,11-17,18-25,26-33,55-79
1m1k d1m1kg1 G:1-7,11-17,18-25,26-33,55-79
1q82 d1q82g1 G:1-7,11-17,18-25,26-33,55-79
1k8a d1k8ag1 G:1-7,11-17,18-25,26-33,55-79
1qvf d1qvfe1 E:1-7,11-17,18-25,26-33,55-79
1nji d1njig1 G:1-7,11-17,18-25,26-33,55-79
1q81 d1q81g1 G:1-7,11-17,18-25,26-33,55-79
1n8r d1n8rg1 G:1-7,11-17,18-25,26-33,55-79
1qvg d1qvge1 E:1-7,11-17,18-25,26-33,55-79
1yi2 d1yi2e1 E:1-7,11-17,18-25,26-33,55-79
1yit d1yite1 E:1-7,11-17,18-25,26-33,55-79
1vq4 d1vq4e1 E:1-7,11-17,18-25,26-33,55-79
1q86 d1q86g1 G:1-7,11-17,18-25,26-33,55-79
2otj d2otje1 E:1-7,11-17,18-25,26-33,55-79
1vq6 d1vq6e1 E:1-7,11-17,18-25,26-33,55-79
1vq5 d1vq5e1 E:1-7,11-17,18-25,26-33,55-79
1yjw d1yjwe1 E:1-7,11-17,18-25,26-33,55-79
1yjn d1yjne1 E:1-7,11-17,18-25,26-33,55-79
2qba d2qbag2 G:82-90,95-99,100-105,111-116,136-152
2qbc d2qbcg2 G:82-90,95-99,100-105,111-116,136-152
2cql d2cqla1 A:7-12,16-22,23-30,31-38,63-87
2qbi d2qbig2 G:81-90,95-99,100-105,111-116,136-152
2qbk d2qbkg2 G:81-90,95-99,100-105,111-116,136-152
2. i.1.1 Ribosome and ribosomal fragments
Ribosome and ribosomal fragments
2zkr d2zkre1 E:87-96,101-106,110-116,123-128,150-166
1w2b d1w2be_ E:79-88,93-99,100-106,113-118,137-153
1sm1 d1sm1e_ E:84-90,94-98,102-107,112-116,137-153
1eg0 d1eg0j_ J:76-84,87-93,94-100,105-109,130-146
1c04 d1c04b_ B:82-90,93-99,100-106,111-115,136-152
487d d487dj_ J:82-90,93-99,100-106,111-115,136-152
1giy d1giyh_ H:81-90,93-99,100-106,111-115,136-152
1ml5 d1ml5h_ H:81-90,93-99,100-106,111-115,136-152
1p85 d1p85e_ E:5-10,14-20,21-28,29-36,57-81
1p86 d1p86e_ E:5-10,14-20,21-28,29-36,57-81
1w2b d1w2be_ E:1-7,11-17,18-25,26-33,55-79
1nwx d1nwxe_ E:84-89,94-100,101-107,112-116,137-153
1nwy d1nwye_ E:84-89,94-100,101-107,112-116,137-153
1nkw d1nkwe_ E:84-89,94-100,101-107,112-116,137-153
3. c.94.1 Periplasmic binding protein-like II Similar in architecture to the superfamily I but partly differs in topology !
Periplasmic binding protein-like II consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication ! mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
1xoc d1xoca1 A:63-68,69-77,80-87,135-142,145-157
3dp8 d3dp8c1 C:44-49,51-57,61-67,116-122,128-135
3e3k d3e3kc1 C:44-49,51-57,61-67,116-123,128-135
1uiu d1uiub_ B:1044-1049,1049-1057,1061-1068,1116-1122,1126-1135
1dpp d1dppe_ E:45-49,50-57,61-68,133-139,143-152
1dpp d1dppa_ A:45-49,50-57,61-68,133-139,143-152
1dpp d1dppc_ C:45-49,50-57,61-68,133-139,143-152
1dpe d1dpea_ A:45-49,49-57,61-68,133-140,143-152
1dpp d1dppg_ G:45-49,50-57,61-68,133-139,143-152
1b5h d1b5ha_ A:54-59,60-68,70-77,142-148,152-161
1b3l d1b3la_ A:54-59,60-68,70-77,142-148,154-162
3e3k d3e3ka1 A:44-49,49-57,61-68,116-122,126-135
1qka d1qkaa_ A:54-59,60-68,70-77,142-148,152-161
1b46 d1b46a_ A:54-59,60-68,70-77,142-148,152-161
1uiv d1uivb_ B:1044-1049,1049-1057,1061-1068,1116-1122,1128-1135
1b58 d1b58a_ A:54-59,60-68,70-77,142-148,152-161
1zlq d1zlqb1 B:44-49,50-57,61-68,116-122,128-135
1b4h d1b4ha_ A:54-59,59-68,70-77,142-148,152-161
1uiu d1uiua_ A:44-49,49-57,61-68,116-122,126-135
3e3k d3e3kb1 B:44-49,49-57,61-68,116-122,126-135
1zlq d1zlqa1 A:44-49,49-57,61-68,116-122,128-135
1b40 d1b40a_ A:54-59,60-68,70-77,142-148,154-161
1b3h d1b3ha_ A:54-59,60-68,70-77,142-148,154-161
1ola d1olaa_ A:54-59,60-68,70-77,142-148,154-161
1jet d1jeta_ A:54-59,60-68,70-77,142-148,154-161
1uiv d1uiva_ A:44-49,49-57,61-68,116-122,128-135
3dp8 d3dp8b1 B:44-49,49-57,61-68,116-122,126-135
1b6h d1b6ha_ A:54-59,60-68,70-77,142-148,154-161
1b05 d1b05a_ A:54-59,60-68,70-77,142-148,154-161
1b5j d1b5ja_ A:54-59,60-68,70-77,142-148,154-161
1b32 d1b32a_ A:54-59,60-68,70-77,142-148,154-161
1b3g d1b3ga_ A:54-59,60-68,70-77,142-148,154-161
1b1h d1b1ha_ A:54-59,60-68,70-77,142-148,154-161
1qkb d1qkba_ A:54-59,60-68,70-77,142-148,154-161
1b4z d1b4za_ A:54-59,60-68,70-77,142-148,154-161
1b9j d1b9ja_ A:54-59,60-68,70-77,142-148,154-161
1b3f d1b3fa_ A:54-59,60-68,70-77,142-148,154-161
1b0h d1b0ha_ A:54-59,60-68,70-77,142-148,154-161
3dp8 d3dp8a1 A:44-49,49-57,61-68,116-122,126-135
1rkm d1rkma_ A:54-59,60-68,70-77,142-148,154-161
1b5i d1b5ia_ A:54-59,60-68,70-77,142-148,154-161
1b52 d1b52a_ A:54-60,60-68,70-77,142-148,154-161
1b51 d1b51a_ A:54-59,59-68,70-77,142-148,154-161
1olc d1olca_ A:54-59,60-68,70-77,142-148,154-161
1b2h d1b2ha_ A:54-59,59-68,70-77,142-148,154-161
2olb d2olba_ A:54-59,59-68,70-77,142-148,154-161
2rkm d2rkma_ A:54-59,60-68,70-77,142-148,154-161
1jeu d1jeua_ A:54-59,59-68,70-77,142-148,154-161
1jev d1jeva_ A:54-59,59-68,70-77,142-148,154-161
1b7h d1b7ha_ A:54-59,59-68,70-77,142-148,154-161
1b3l d1b3lc_ C:54-59,59-68,70-77,142-148,154-161
1uqw d1uqwa_ A:46-51,52-59,63-70,118-125,128-137
1uqw d1uqwb_ B:46-51,52-59,63-70,118-125,128-137
4. b.1.18 E set domains "Early" Ig-like fold families possibly related to the immunoglobulin and/or fibronectin type III superfamilies !
Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
2bhz d2bhza1 A:35-42,47-53,77-84,85-89,223-230
2by2 d2by2a1 A:35-42,47-53,77-84,85-89,223-230
2by0 d2by0a1 A:35-42,47-53,77-84,85-89,223-230
2bxy d2bxya1 A:35-42,47-53,77-84,85-89,223-230
2by3 d2by3a1 A:35-42,47-53,77-84,85-89,223-230
2bhu d2bhua1 A:35-42,47-53,77-84,85-89,223-230
2bxz d2bxza1 A:35-42,47-53,77-84,85-89,223-230
2bhy d2bhya1 A:35-42,47-53,77-84,85-89,223-230
2by1 d2by1a1 A:35-42,47-53,77-84,85-89,223-230
1clc d1clca2 A:66-72,76-83,116-124,126-135,479-495
5. d.4.1 His-Me finger endonucleases common motif contains conserved histidine residue and metal-binding site !
His-Me finger endonucleases core: (alpha)-beta-omega_loop-beta-alpha; embeded in larger different structures
1qae d1qaea_ A:11-16,37-47,141-150,168-177,206-215
1smn d1smna_ A:11-16,37-47,141-150,168-177,206-215
1qae d1qaeb_ B:11-16,37-47,141-150,168-177,206-215
1g8t d1g8ta_ A:11-16,37-47,141-150,168-177,206-215
1ql0 d1ql0a_ A:11-16,37-47,141-150,168-177,206-215
1ql0 d1ql0b_ B:11-16,37-47,141-150,168-177,206-215
1g8t d1g8tb_ B:11-16,37-47,141-150,168-177,206-215
1smn d1smnb_ B:11-16,36-47,141-150,168-177,206-215
1ql0 d1ql0a_ A:11-16,37-47,141-150,168-177,223-234
1g8t d1g8ta_ A:11-16,37-47,141-150,168-177,223-234
1g8t d1g8tb_ B:11-16,37-47,141-150,168-177,223-234
1ql0 d1ql0b_ B:11-16,37-47,141-150,168-177,223-234
6. c.1.8 (Trans)glycosidases
TIM beta/alpha-barrel contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 ! the first seven superfamilies have similar phosphate-binding sites
1kxt d1kxtc2 C:63-67,116-122,123-128,129-133,172-190
1c8q d1c8qa2 A:63-67,118-122,123-128,129-133,172-190
1nm9 d1nm9a2 A:63-67,118-122,123-128,129-133,172-190
1mfv d1mfva2 A:63-67,118-122,123-128,129-133,172-190
1jxj d1jxja2 A:63-67,118-122,123-128,129-133,172-190
1z32 d1z32x2 X:63-67,118-122,123-128,129-133,172-190
1q4n d1q4nx2 X:63-67,118-122,123-128,129-133,172-190
1u33 d1u33a2 A:63-67,118-122,123-128,129-133,172-190
1kxq d1kxqd2 D:63-67,118-122,123-128,129-133,172-190
1ua3 d1ua3a2 A:63-67,118-122,123-128,129-133,172-190
1mfu d1mfua2 A:63-67,118-122,123-128,129-133,172-190
1jxk d1jxka2 A:63-67,118-122,123-128,129-133,172-190
3dhp d3dhpa2 A:63-67,118-122,123-128,129-133,172-190
1wo2 d1wo2a2 A:63-67,118-122,123-128,129-133,172-190
1kxq d1kxqb2 B:63-67,118-122,123-128,129-133,172-190
1hx0 d1hx0a2 A:63-67,118-122,123-128,129-133,172-190
1dhk d1dhka2 A:63-67,118-122,123-128,129-133,172-190
1smd d1smda2 A:63-67,118-122,123-128,129-133,172-190
1kxv d1kxva2 A:63-67,118-122,123-128,129-133,172-190
1kxv d1kxvb2 B:63-67,118-122,123-128,129-133,172-190
2qv4 d2qv4a2 A:63-67,118-122,123-128,129-133,172-190
1xh0 d1xh0a2 A:63-67,118-122,123-128,129-133,172-190
3cpu d3cpua2 A:63-67,118-122,123-128,129-133,172-190
1kxq d1kxqc2 C:63-67,118-122,123-128,129-133,172-190
3baj d3baja2 A:63-67,118-122,123-128,129-133,172-190
1kgx d1kgxa2 A:63-67,118-122,123-128,129-133,172-190
1cpu d1cpua2 A:63-67,118-122,123-128,129-133,172-190
1kxq d1kxqa2 A:63-67,118-122,123-128,129-133,172-190
1xcw d1xcwa2 A:63-67,118-122,123-128,129-133,172-190
1xcx d1xcxa2 A:63-67,118-122,123-128,129-133,172-190
3bax d3baxa2 A:63-67,118-122,123-128,129-133,172-190
1kxt d1kxta2 A:63-67,118-122,123-128,129-133,172-190
1xgz d1xgza2 A:63-67,118-122,123-128,129-133,172-190
1xh1 d1xh1a2 A:63-67,118-122,123-128,129-133,172-190
1pig d1piga2 A:63-67,118-122,123-128,129-133,172-190
1xd1 d1xd1a2 A:63-67,118-122,123-128,129-133,172-190
1xd0 d1xd0a2 A:63-67,118-122,123-128,129-133,172-190
1kb3 d1kb3a2 A:63-67,118-122,123-128,129-133,172-190
2cpu d2cpua2 A:63-67,118-122,123-128,129-133,172-190
1u2y d1u2ya2 A:63-67,118-122,123-128,129-133,172-190
1kbb d1kbba2 A:63-67,118-122,123-128,129-133,172-190
1kbk d1kbka2 A:63-67,118-122,123-128,129-133,172-190
3baw d3bawa2 A:63-67,118-122,123-128,129-133,172-190
1bsi d1bsia2 A:63-67,118-122,123-128,129-133,172-190
1kgu d1kgua2 A:63-67,118-122,123-128,129-133,172-190
1pif d1pifa2 A:63-67,118-122,123-128,129-133,172-190
1xh2 d1xh2a2 A:63-67,118-122,123-128,129-133,172-190
3bak d3baka2 A:63-67,118-122,123-128,129-133,172-190
1ose d1osea2 A:63-67,118-122,123-128,129-133,172-190
3bai d3baia2 A:63-67,118-122,123-128,129-133,172-190
3bay d3baya2 A:63-67,118-122,123-128,129-133,172-190
1b2y d1b2ya2 A:63-67,118-122,123-128,129-133,172-190
1kgw d1kgwa2 A:63-67,118-122,123-128,129-133,172-190
1u30 d1u30a2 A:63-67,118-122,123-128,129-133,172-190
1hny d1hnya2 A:63-67,118-122,123-128,129-133,172-190
1kxt d1kxte2 E:63-67,118-122,123-128,129-133,172-190
1ppi d1ppia2 A:63-67,118-122,123-128,129-133,172-190
1bvn d1bvnp2 P:63-67,118-122,123-128,129-133,172-190
1jfh d1jfha2 A:63-67,118-122,123-128,129-133,172-190
1vah d1vaha2 A:63-67,118-122,123-128,129-133,172-190
7. g.41.3 Zinc beta-ribbon
Rubredoxin-like metal(zinc or iron)-bound fold; sequence contains two CX(n)C motifs, in most cases n = 2
1wii d1wiia_ A:23-27,34-42,43-52,53-61,66-81
8. b.76.1 Outer surface protein 21 stranded sheet partly folded upon itself at the ends !
open-sided beta-meander single sheet formed by beta-hairpin repeats; exposed on both sides in the middle
1fj1 d1fj1f_ F:195-204,212-219,220-228,229-239,264-273
1fj1 d1fj1e_ E:195-204,212-219,220-228,229-239,264-273
1rjl d1rjlc_ C:220-229,234-242,243-251,252-262,287-296
1osp d1ospo_ O:195-204,212-219,220-228,229-239,264-273
9. b.66.1 Hemopexin-like domain
4-bladed beta-propeller consists of four 4-stranded beta-sheet motifs; meander
1qjs d1qjsb2 B:343-350,377-383,396-403,404-410,411-418
1qjs d1qjsa2 A:343-350,377-383,396-403,404-410,411-418
10. d.96.2 ApbE-like duplication: contains two differently decorated beta(2)-alpha(2)-beta(2) subdomains, similar to other T-fold domains; probably does not form the tunnel-shaped oligomers !
T-fold beta(2)-alpha(2)-beta(2); 2 layers: alpha/beta; antiparallel sheet 1234 ! tunnel-shaped: its known members form wide oligomeric barrels different sizes
1vrm d1vrma1 A:245-253,255-262,288-297,329-336,343-352
11. b.67.2 Arabinanase/levansucrase/invertase
5-bladed beta-propeller consists of five 4-stranded beta-sheet motifs; meander
2b4w d2b4wa1 A:121-131,134-141,143-152,157-165,171-178
12. d.93.1 SH2 domain
SH2-like 3 layers: a/b/a; antiparallel beta-sheet of 5 strands is flaked by two helices
1mw4 d1mw4a_ A:54-62,70-75,78-84,85-91,91-100
13. a.250.1 IpaD-like
IpaD-like 6 helices; bundle, up-and-down; can be divided into two four-helical bundles sharing two helices (3 and 6), which are twice longer than the rest
2izp d2izpa1 A:1072-1078,1171-1176,1178-1183,1246-1250,1250-1301
2j9t d2j9ta1 A:72-78,171-176,178-183,246-250,250-301
2j9t d2j9tb1 B:72-79,171-176,178-183,246-250,250-301
2ixr d2ixra1 A:72-78,171-175,179-183,246-250,250-302
List of motif hits that are not present in SCOP but are found in PDB for pattern ID: 340 (enumeration index: query133) of S5
2xg2 H:82-90,94-100,101-107,112-117,137-153
2rf8 A:44-52,51-57,68-73,75-83,104-113
2rf8 B:44-52,51-57,68-73,75-83,104-113
3orb G:81-90,93-99,100-106,111-116,136-152
3pyv G:82-91,94-100,101-107,112-117,137-153
3ofz G:81-90,93-99,100-106,111-116,136-152
3tch A:80-85,86-94,96-103,168-174,180-188
3kiy H:82-91,94-100,101-107,112-116,137-153
3i56 E:79-88,93-99,100-106,113-118,137-153
3i56 E:1-7,11-17,18-25,26-33,55-79
3pio E:82-91,94-100,101-107,112-116,137-153
2xzi B:308-317,358-365,367-380,385-396,397-404
3cka B:264-273,281-288,289-297,298-308,333-342
3cka A:264-273,281-288,289-297,298-308,333-342
3izr F:3-12,16-22,23-30,31-38,62-86
3izr F:86-95,100-107,108-115,122-127,149-165
2y11 H:85-91,94-100,101-107,112-116,137-153
2af5 A:241-250,258-265,266-274,275-285,310-319
3ij8 A:63-67,118-122,123-128,129-133,172-190
2fkj C:310-319,327-334,335-343,344-354,379-388
2fkj B:310-319,327-334,335-343,344-354,379-388
2fkj A:310-319,327-334,335-343,344-354,379-388
3knk H:82-89,94-100,101-107,112-116,137-153
3izs F:85-94,99-105,110-116,123-128,150-166
3nmb A:159-167,204-213,214-221,223-230,232-243
3ij9 A:63-67,118-122,123-128,129-133,172-190
3o58 I:85-93,99-107,108-116,123-127,150-166
3o58 I:4-12,16-21,23-30,31-38,61-85
3f1h H:82-91,94-100,101-107,112-117,137-153
3eex B:264-273,281-288,289-297,298-308,333-342
2fkg A:264-273,281-288,289-297,298-308,333-342
2oy7 A:264-273,281-288,289-297,298-308,333-342
3ofc G:81-90,93-99,100-106,111-116,136-152
2o7i A:48-54,55-62,65-72,119-126,131-142
3hlb B:355-359,358-366,367-375,378-386,392-413
3hlb A:355-359,358-366,367-375,378-386,392-413
3r8s G:81-90,93-99,100-106,111-116,136-152
3g6e E:79-88,93-99,100-106,113-118,137-153
3g6e E:1-7,11-17,18-25,26-33,55-79
3i55 E:79-88,93-99,100-106,113-118,137-153
3i55 E:1-7,11-17,18-25,26-33,55-79
2wrr H:82-91,94-100,101-107,112-117,137-153
3f1f H:82-91,94-100,101-107,112-117,137-153
3e1b 3:81-89,93-99,100-106,111-116,136-152
2oy1 O:194-203,211-218,219-227,228-238,263-272
2y13 H:82-91,94-100,101-107,112-116,137-153
3pip E:82-91,94-100,101-107,112-116,137-153
2oaj A:284-291,332-342,346-356,363-373,380-391
2wrl H:87-91,94-100,101-107,112-116,137-153
3i8i H:82-91,94-100,101-107,112-116,137-152
3hux H:82-90,94-100,101-107,112-116,137-153
3mw0 A:44-49,49-57,61-68,116-122,128-135
3mw0 B:44-49,49-57,61-68,116-122,128-135
2y0v H:85-91,94-100,101-107,112-116,137-153
3i20 G:81-90,93-99,100-106,111-116,136-152
2wdi H:82-90,94-100,101-107,112-117,137-153
2x9u H:82-91,94-100,101-107,112-116,137-153
2rlc A:46-52,51-57,68-73,75-83,104-113
3zvp H:85-89,94-100,101-107,112-117,137-153
3mvy B:44-49,49-57,61-68,116-122,128-135
3mvy A:44-49,49-57,61-68,116-122,128-135
2oy8 A:264-273,281-288,289-297,298-308,333-342
3ole A:63-67,118-122,123-128,129-133,172-190
4a1e E:85-94,99-104,108-114,121-126,148-164
4a1e E:4-12,15-22,23-30,31-38,61-84
2wrj H:87-91,94-100,101-107,112-116,137-153
3mvw B:44-49,49-57,61-68,116-122,128-135
3mvw A:44-49,49-57,61-68,116-122,128-135
3g4s E:79-88,93-99,100-106,113-118,137-153
3g4s E:1-7,11-17,18-25,26-33,55-79
3ofq G:81-90,93-99,100-106,111-116,136-152
2xg0 H:82-90,94-100,101-107,112-117,137-153
3gp8 A:577-581,607-615,616-621,626-630,630-637
3osd A:161-169,206-215,216-223,225-232,234-245
3huz H:82-91,94-100,101-107,112-117,137-153
3ofr G:81-90,93-99,100-106,111-116,136-152
3blk A:63-67,118-122,123-128,129-133,172-190
2xzk B:308-317,358-365,367-380,385-396,397-404
3pnd D:241-245,249-255,283-292,322-330,338-345
3pnd A:240-245,249-255,283-292,322-330,338-345
3i5o A:49-54,55-62,65-72,119-126,131-142
3i5o B:49-54,55-62,65-72,119-126,131-142
3l2l A:63-67,118-122,123-128,129-133,172-190
3g71 E:79-88,93-99,100-106,113-118,137-153
3g71 E:1-7,11-17,18-25,26-33,55-79
3i1t G:83-90,93-99,100-105,111-116,136-152
3oat G:81-90,93-99,100-106,111-116,136-152
3tcf F:80-85,86-94,96-103,168-174,178-188
3tcf C:80-85,85-94,96-103,168-174,178-188
3tcf D:80-85,85-94,96-103,168-174,178-188
3tcf B:80-85,86-94,96-103,168-174,178-188
3tcf G:80-85,86-94,96-103,168-174,178-188
3tcf E:80-85,85-94,96-103,168-174,178-188
3tcf A:80-85,86-94,96-103,168-174,178-187
3tcf H:80-85,85-94,96-103,168-174,178-188
2oyb O:195-204,212-219,220-228,229-239,264-273
2ol8 O:193-202,210-217,218-226,227-237,262-271
3oi3 H:83-90,94-100,101-107,112-116,137-153
3ckf A:172-181,189-196,197-205,206-216,241-250
3mvx B:44-49,49-57,61-68,116-122,128-135
3mvx A:44-49,49-57,61-68,116-122,128-135
3oh7 H:83-90,94-100,101-107,112-117,137-153
3mz9 A:44-49,49-57,61-68,116-122,128-135
3mz9 B:44-49,49-57,61-68,116-122,128-135
3m07 A:18-26,31-37,62-69,71-75,209-216
3oli A:63-67,118-122,123-128,129-133,172-190
2jqz A:11-25,33-42,74-83,92-100,100-111
3ofd G:83-90,93-99,100-105,111-116,136-152
2xtg H:82-91,94-100,101-107,112-116,137-153
3rqt A:43-49,49-56,59-66,110-116,120-129
3m8u A:69-73,73-81,85-92,157-164,167-176
2xqe H:82-91,94-100,101-107,112-117,137-153
3kcr G:81-88,93-99,100-105,111-116,136-146
3knm H:82-90,94-100,101-107,112-116,137-153
2wdn H:82-91,94-100,101-107,112-116,137-153
2y0x H:85-91,94-100,101-107,112-116,137-153
3nft A:1072-1079,1171-1176,1178-1183,1246-1250,1250-1304
3tcg G:80-85,85-94,96-103,168-174,178-188
3tcg D:80-85,85-94,96-103,168-174,178-188
3tcg C:80-85,85-94,96-103,168-174,178-188
3tcg E:80-85,86-94,96-103,168-174,178-188
3tcg B:80-85,86-94,96-103,168-174,178-188
3tcg H:80-85,85-94,96-103,168-174,180-188
3tcg F:80-85,85-94,96-103,168-174,178-188
3tcg A:80-85,85-94,96-103,168-174,178-188
2g8c O:195-204,212-219,220-228,229-239,264-273
3fik G:81-90,93-99,100-106,111-116,136-149
3mrz G:82-91,94-100,101-107,112-117,137-153
3l2m A:63-67,118-122,123-128,129-133,172-190
3mzb B:44-49,49-57,61-68,116-122,126-135
3mzb A:44-49,49-57,61-68,116-122,128-135
3oi1 H:82-91,94-100,101-107,112-117,137-153
3qim B:44-49,49-57,61-68,116-122,128-135
3qim A:44-49,49-57,61-68,116-122,128-135
3e1d 3:81-89,93-99,100-106,111-116,136-152
4a17 E:4-12,15-22,23-30,31-38,61-84
4a17 E:85-94,99-104,108-114,121-126,148-164
1zu0 A:46-51,52-59,63-70,117-124,127-138
3ohz H:82-91,94-100,101-107,112-117,137-153
3mvz B:44-49,49-57,61-68,116-122,128-135
3mvz A:44-49,49-57,61-68,116-122,128-135
4a1c E:85-94,99-104,108-114,121-126,148-164
4a1c E:4-12,15-22,23-30,31-38,61-84
3olg A:63-67,118-122,123-128,129-133,172-190
3cxc E:79-88,93-99,100-106,113-118,137-153
3cxc E:1-7,11-17,18-25,26-33,55-79
3kir H:82-91,94-100,101-107,112-116,137-153
3gxx C:44-52,61-66,73-79,80-84,85-103
3gxx B:44-51,61-65,74-79,80-84,85-102
3jyw H:6-12,16-22,23-30,31-38,61-85
3jyw H:87-95,99-104,110-116,123-128,150-166
3hlf A:355-359,358-366,367-375,378-386,392-411
3ohj H:82-90,94-100,101-107,112-117,137-153
3hlc A:355-359,358-366,367-376,377-386,392-411
3j01 G:82-90,94-99,100-105,111-116,136-152
2z23 A:54-59,60-68,70-77,142-148,152-161
1zty A:46-52,52-59,63-70,117-124,127-138
2x9s H:82-91,94-100,101-107,112-116,137-153
3oi5 H:83-90,94-100,101-107,112-116,137-153
3hbk A:142-150,189-198,200-207,208-216,218-229
2wdj H:82-90,94-100,101-107,112-117,137-153
3hl9 D:355-359,358-366,367-375,378-386,392-413
3hl9 B:355-359,358-366,367-375,378-386,392-413
3hl9 A:355-359,358-366,367-375,378-386,392-413
3hl9 C:355-359,358-366,367-375,378-386,392-413
3tpa A:52-56,57-64,68-75,140-147,150-159
3blp X:63-67,118-122,123-128,129-133,172-190
2y17 H:83-91,94-100,101-107,112-116,137-153
3kiw H:82-91,94-100,101-107,112-116,137-153
3pyt G:82-91,94-100,101-107,112-117,137-153
2ol6 O:194-203,211-218,219-227,228-238,263-272
3o9p A:54-59,59-66,70-77,142-148,154-162
2pi3 O:195-204,212-219,220-228,229-239,264-273
3kno H:82-89,94-100,101-107,112-116,137-153
2hkd A:264-273,281-288,289-297,298-308,333-342
2ol7 A:195-204,212-219,220-228,229-239,264-273
2ol7 B:195-204,212-219,220-228,229-239,264-273
3oh5 H:83-90,94-100,101-107,112-117,137-153
2xux H:82-91,94-100,101-107,112-116,137-153
2wro H:82-91,94-100,101-107,112-117,137-153
3t66 A:45-51,58-65,69-76,120-127,130-140
3t66 A:52-58,58-65,69-76,120-127,130-140
3pyr G:82-91,94-100,101-107,112-117,137-153
2y15 H:83-91,94-100,101-107,112-116,137-153
3h3l C:139-147,184-193,194-201,203-210,212-223
3h3l B:139-147,184-193,194-201,202-210,212-222
3kni H:82-91,94-100,101-107,112-117,137-153
3hlg A:355-359,358-366,367-375,378-386,392-411
3pyo G:82-91,94-100,101-107,112-117,137-153
3hle A:355-359,358-366,367-375,378-386,392-411
3oas G:83-90,93-99,100-105,111-116,136-152
4a1a E:85-94,99-104,108-114,121-126,148-164
4a1a E:4-12,15-22,23-30,31-38,61-84
3ohk H:82-90,94-100,101-107,112-117,137-153
3kit H:82-91,94-100,101-107,112-116,137-153
3og0 G:83-89,93-99,100-105,111-116,136-152
3i22 G:83-89,93-99,100-105,111-116,136-152
3ms1 G:82-91,94-100,101-107,112-117,137-153
3ckg A:180-189,197-204,205-213,214-224,249-258
2wdl H:82-91,94-100,101-107,112-116,137-153
2bjf A:44-52,51-57,68-73,75-83,104-113
3ry3 B:68-74,74-81,85-92,136-143,146-156
3ry3 A:68-74,74-81,85-92,136-143,146-156
3i9e H:82-91,94-100,101-107,112-116,137-151
3i1n G:81-90,93-99,100-106,111-116,136-152
3ec5 A:264-273,281-288,289-297,298-308,333-342
3o5h I:85-93,99-107,108-116,123-127,150-166
3o5h I:4-12,16-21,23-30,31-38,61-85
3r8t G:81-90,93-99,100-106,111-116,136-152
2y19 H:85-91,94-100,101-107,112-116,137-153
2y0z H:85-91,94-100,101-107,112-116,137-153
2rg2 A:44-52,51-57,68-73,75-83,104-113
2i5v O:195-204,212-219,220-228,229-239,264-273
2i5z O:195-204,212-219,220-228,229-239,264-273
3ij7 A:63-67,118-122,123-128,129-133,172-190
3fin H:82-90,94-100,101-107,112-117,137-153
4a59 D:434-439,528-534,535-541,546-550,551-574
3i1r G:81-90,93-99,100-106,111-116,136-152
3old A:63-67,118-122,123-128,129-133,172-190
2xzj B:308-317,358-365,367-380,385-396,397-404
3i1p G:83-90,93-99,100-105,111-116,136-152
3hld A:355-359,358-366,367-375,378-386,392-411
2bjg B:44-52,51-57,68-73,75-82,104-113
2bjg A:44-52,51-57,68-73,75-80,104-113
3hbc A:71-78,77-86,89-96,98-106,122-134
2noo A:44-49,49-57,61-68,116-122,126-135
2qa4 E:79-88,93-99,100-106,113-118,137-153
2qa4 E:1-7,11-17,18-25,26-33,55-79
3ccs E:79-88,93-99,100-106,113-118,137-153
3ccs E:1-7,11-17,18-25,26-33,55-79
2gya E:5-10,14-20,21-28,29-36,57-81
3ccm E:79-88,93-99,100-106,113-118,137-153
3ccm E:1-7,11-17,18-25,26-33,55-79
3ccj E:79-88,93-99,100-106,113-118,137-153
3ccj E:1-7,11-17,18-25,26-33,55-79
3ccr E:79-88,93-99,100-106,113-118,137-153
3ccr E:1-7,11-17,18-25,26-33,55-79
2qex E:79-88,93-99,100-106,113-118,137-153
2qex E:1-7,11-17,18-25,26-33,55-79
3cma E:79-88,93-99,100-106,113-118,137-153
3cma E:1-7,11-17,18-25,26-33,55-79
3cme E:1-7,11-17,18-25,26-33,55-79
3cme E:79-88,93-99,100-106,113-118,137-153
3ccq E:1-7,11-17,18-25,26-33,55-79
3ccq E:79-88,93-99,100-106,113-118,137-153
3cc7 E:79-88,93-99,100-106,113-118,137-153
3cc7 E:1-7,11-17,18-25,26-33,55-79
3cc4 E:79-88,93-99,100-106,113-118,137-153
3cc4 E:1-7,11-17,18-25,26-33,55-79
3cpw E:79-88,93-99,100-106,113-118,137-153
3cpw E:1-7,11-17,18-25,26-33,55-79
3ccu E:79-88,93-99,100-106,113-118,137-153
3ccu E:1-7,11-17,18-25,26-33,55-79
3ccl E:1-7,11-17,18-25,26-33,55-79
3ccl E:79-88,93-99,100-106,113-118,137-153
3cce E:1-7,11-17,18-25,26-33,55-79
3cce E:79-88,93-99,100-106,113-118,137-153
3cc2 E:1-7,11-17,18-25,26-33,55-79
3cc2 E:79-88,93-99,100-106,113-118,137-153
3bbo I:125-133,138-143,144-149,155-160,180-196
3ccv E:79-88,93-99,100-106,113-118,137-153
3ccv E:1-7,11-17,18-25,26-33,55-79
3cd6 E:79-88,93-99,100-106,113-118,137-153
3cd6 E:1-7,11-17,18-25,26-33,55-79
2gyc E:6-10,14-20,21-28,29-36,57-81