1. d.68.2 EPT/RTPC-like IF3-like beta-alpha-beta-alpha-beta(2); 2 layers; mixed sheet 1243, strand 4 is antiparallel to the rest 1naw d1nawb_ B:259-270,289-297,303-317,317-326,350-355 1ejc d1ejca_ A:259-270,289-297,303-317,317-326,350-355 1dlg d1dlgb_ B:259-270,289-297,303-317,317-326,350-355 1ybg d1ybgb1 B:259-270,289-297,303-317,317-326,350-355 1ejd d1ejdb_ B:259-270,289-297,303-317,317-326,350-355 1naw d1nawa_ A:259-270,289-296,303-317,317-325,350-355 1dlg d1dlga_ A:259-270,289-296,303-317,317-325,350-355 1ybg d1ybga1 A:259-270,289-297,303-317,317-326,350-355 1eyn d1eyna_ A:259-270,289-296,303-317,317-325,350-355 1rf5 d1rf5a_ A:263-273,297-304,313-324,324-332,363-370 1ybg d1ybgc1 C:259-270,289-297,303-317,317-326,350-355 1ejd d1ejda_ A:259-270,289-296,303-317,317-325,350-355 1rf6 d1rf6b_ B:263-273,297-304,313-324,324-332,363-370 1rf6 d1rf6a_ A:122-133,157-162,166-180,181-188,212-219 1ryw d1rywd_ D:259-270,289-297,303-317,317-326,350-355 1ybg d1ybgd1 D:259-270,289-296,303-317,317-325,350-355 1a2n d1a2na_ A:259-270,289-297,303-317,317-326,350-355 1ryw d1rywb_ B:259-270,289-296,303-317,317-325,350-355 1q3g d1q3gc_ C:259-270,289-297,303-317,317-326,350-355 1q3g d1q3gi_ I:259-270,289-297,303-317,317-326,350-355 1q3g d1q3gk_ K:259-270,289-297,303-317,317-326,350-355 1ryw d1rywa_ A:259-270,289-296,303-317,317-325,350-355 1q3g d1q3gb_ B:259-270,289-297,303-317,317-326,350-355 1rf4 d1rf4d_ D:263-273,297-304,313-324,324-332,363-370 1ryw d1rywe_ E:259-270,289-296,303-317,317-325,350-355 1q3g d1q3gy_ Y:259-270,289-296,303-317,317-325,350-355 1q3g d1q3gw_ W:259-270,289-296,303-317,317-325,350-355 1ryw d1rywc_ C:259-270,289-296,303-317,317-325,350-355 1ryw d1rywf_ F:259-270,289-296,303-317,317-325,350-355 1q3g d1q3gf_ F:259-270,289-296,303-317,317-325,350-355 1q3g d1q3gl_ L:259-270,289-296,303-317,317-325,350-355 1q3g d1q3gg_ G:259-270,289-296,303-317,317-325,350-355 1q3g d1q3ga_ A:259-270,289-296,303-317,317-325,350-355 1q3g d1q3ge_ E:259-270,289-296,303-317,317-325,350-355 1ryw d1rywh_ H:259-270,289-296,303-317,317-325,350-355 1q3g d1q3gd_ D:259-270,289-296,303-317,317-325,350-355 1q3g d1q3gj_ J:259-270,289-296,303-317,317-325,350-355 1q3g d1q3gx_ X:259-270,289-296,303-317,317-325,350-355 1q3g d1q3gh_ H:259-270,289-296,303-317,317-325,350-355 1q3g d1q3gz_ Z:259-270,289-296,303-317,317-325,350-355 1uae d1uaea_ A:259-270,289-296,303-317,317-325,350-355 1rf6 d1rf6b_ B:122-133,158-162,166-180,181-188,212-219 1rf4 d1rf4c_ C:122-133,158-162,166-180,181-188,212-219 1rf4 d1rf4b_ B:122-133,157-162,166-181,181-188,212-219 1rf4 d1rf4d_ D:122-133,158-162,166-180,181-188,212-219 1rf4 d1rf4c_ C:263-273,297-304,313-324,324-332,363-368 1rf6 d1rf6c_ C:122-133,158-162,166-180,181-188,212-219 1rf4 d1rf4a_ A:122-133,158-162,166-180,181-188,212-219 1rf6 d1rf6d_ D:263-273,297-304,313-324,324-332,363-368 1rf6 d1rf6d_ D:122-133,158-162,166-180,181-188,212-219 1rf4 d1rf4a_ A:263-273,297-304,313-324,324-332,363-368 1rf6 d1rf6a_ A:263-273,297-304,313-324,324-332,363-368 1rf4 d1rf4b_ B:263-273,297-304,313-324,324-332,363-368 1x8t d1x8ta1 A:271-284,303-308,311-325,325-333,364-371 1g6t d1g6ta_ A:271-284,303-308,311-325,325-333,364-371 1g6s d1g6sa_ A:271-284,303-308,311-325,325-333,364-371 1mi4 d1mi4a_ A:271-284,303-308,311-325,325-333,364-371 1rf5 d1rf5a_ A:121-133,158-162,166-180,180-188,212-219 1x8r d1x8ra1 A:271-284,303-308,311-325,325-333,364-371 1q36 d1q36a_ A:271-284,303-308,311-325,325-333,364-371 2aa9 d2aa9a1 A:271-284,303-308,311-325,325-333,364-371 2aay d2aaya1 A:271-284,303-308,311-325,325-333,364-371 2pq9 d2pq9a1 A:271-284,303-308,311-325,325-333,364-371 1rf5 d1rf5c_ C:121-133,158-162,166-180,181-188,212-219 1rf5 d1rf5d_ D:121-133,158-162,166-181,180-188,212-219 1rf5 d1rf5b_ B:122-133,158-165,166-181,181-190,212-219 1ejc d1ejca_ A:123-133,151-158,162-176,176-184,211-216 1rf5 d1rf5d_ D:263-273,297-303,313-325,324-332,363-368 1rf6 d1rf6c_ C:263-273,297-303,313-324,324-332,363-370 1g6t d1g6ta_ A:125-137,160-165,169-183,184-192,221-226 1g6s d1g6sa_ A:125-137,160-165,169-183,184-192,221-226 2aay d2aaya1 A:125-137,160-165,169-183,184-192,221-226 1mi4 d1mi4a_ A:125-137,160-165,169-183,184-192,221-226 2pq9 d2pq9a1 A:125-137,160-165,169-183,184-192,221-226 1q36 d1q36a_ A:125-137,160-165,169-183,184-192,221-226 1x8r d1x8ra1 A:125-137,160-165,169-183,184-192,221-226 2aa9 d2aa9a1 A:125-137,160-165,169-183,184-192,221-226 1rf5 d1rf5b_ B:263-273,297-303,313-324,324-332,363-370 1p89 d1p89a_ A:47-61,87-91,95-110,109-117,149-154 1qmi d1qmib2 B:139-148,180-184,282-297,298-304,332-339 1rf5 d1rf5c_ C:263-273,297-303,313-324,324-332,363-370 1a2n d1a2na_ A:122-133,151-158,162-176,176-184,211-216 1qmi d1qmia2 A:139-148,180-184,282-297,298-304,332-339 1p88 d1p88a_ A:125-137,160-166,169-184,183-193,221-226 1ryw d1rywd_ D:122-133,151-158,162-176,176-184,211-216 1qmi d1qmid2 D:139-148,180-184,282-297,298-304,332-339 1ryw d1rywc_ C:122-133,151-158,162-176,176-184,211-216 1uae d1uaea_ A:122-133,151-158,162-176,176-184,211-216 1ryw d1rywf_ F:122-133,151-158,162-176,176-184,211-216 1ryw d1rywg_ G:122-133,151-158,162-176,176-184,211-216 1ryw d1rywb_ B:122-133,151-158,162-176,176-184,211-216 1q3g d1q3gj_ J:122-133,151-158,162-176,176-184,211-216 1ryw d1rywe_ E:122-133,151-158,162-176,176-184,211-216 1ryw d1rywa_ A:122-133,151-158,162-176,176-184,211-216 1ryw d1rywh_ H:122-133,151-158,162-176,176-184,211-216 1q3g d1q3gz_ Z:122-133,151-158,162-176,176-184,211-216 1q3g d1q3gx_ X:122-133,151-158,162-176,176-184,211-216 1ryw d1rywg_ G:259-270,292-297,303-317,319-326,350-356 1q3g d1q3ge_ E:122-133,151-158,162-176,176-184,211-216 1eps d1epsa_ A:271-284,305-309,314-325,325-333,364-371 1q3g d1q3gf_ F:122-133,151-158,162-176,176-184,211-216 1q3g d1q3gi_ I:122-133,151-158,162-176,176-184,211-216 1q3g d1q3ga_ A:122-133,151-158,162-176,176-184,211-216 1q3g d1q3gw_ W:122-133,151-158,162-176,176-184,211-216 1q3g d1q3gl_ L:122-133,151-158,162-176,176-184,211-216 1q3g d1q3gd_ D:122-133,151-158,162-176,176-184,211-216 1q3g d1q3gh_ H:122-133,151-158,162-176,176-184,211-216 1q3g d1q3gb_ B:122-133,151-158,162-176,176-184,211-216 1q3g d1q3gy_ Y:122-133,151-158,162-176,176-184,211-216 1q3g d1q3gg_ G:122-133,151-158,162-176,176-184,211-216 1q3g d1q3gc_ C:122-133,151-158,162-176,176-184,211-216 1q3g d1q3gk_ K:122-133,151-158,162-176,176-184,211-216 1rf4 d1rf4b_ B:45-59,85-89,91-105,107-114,145-151 1rf4 d1rf4a_ A:45-59,85-89,91-105,107-114,146-151 1ybg d1ybgb1 B:120-133,151-159,162-176,176-184,211-216 1rf4 d1rf4c_ C:45-59,85-89,91-105,107-114,146-151 1rf4 d1rf4d_ D:45-59,85-89,91-105,107-114,146-151 1rf6 d1rf6c_ C:45-59,85-89,91-105,107-114,146-151 1p88 d1p88a_ A:47-61,87-93,95-110,110-118,150-154 1ybg d1ybga1 A:120-133,151-159,162-176,176-184,211-216 1ybg d1ybgc1 C:120-133,151-159,162-176,176-184,211-216 1ejd d1ejda_ A:120-133,151-158,162-176,176-184,211-217 1rf5 d1rf5a_ A:45-59,85-89,91-105,107-114,146-151 1ybg d1ybgd1 D:120-133,151-159,162-176,176-184,211-216 1p89 d1p89a_ A:125-137,160-167,169-184,183-195,221-226 1naw d1nawa_ A:120-133,151-158,162-176,176-184,211-217 1ejd d1ejdb_ B:120-133,151-158,162-176,176-184,211-216 1naw d1nawb_ B:120-133,151-158,162-176,176-184,211-216 1x8t d1x8ta1 A:125-137,160-165,169-183,184-192,221-228 1dlg d1dlgb_ B:120-133,151-158,162-176,176-184,211-216 1dlg d1dlga_ A:120-133,151-158,162-176,176-184,211-216 1g6t d1g6ta_ A:47-61,87-93,95-109,112-118,150-154 1eyn d1eyna_ A:120-133,151-158,162-176,176-184,211-216 1qmh d1qmha2 A:49-64,88-93,98-113,113-124,163-173 2aay d2aaya1 A:47-61,87-93,95-109,108-118,150-154 1eps d1epsa_ A:125-137,160-166,169-183,184-193,221-228 1rf5 d1rf5b_ B:45-59,85-89,91-105,108-114,146-151 1mi4 d1mi4a_ A:47-61,87-93,95-109,108-118,150-154 2pq9 d2pq9a1 A:47-61,87-93,95-109,112-118,150-154 1g6s d1g6sa_ A:47-61,87-93,95-109,108-118,150-154 2aa9 d2aa9a1 A:47-61,87-93,95-109,108-118,150-154 1q36 d1q36a_ A:47-61,87-93,95-109,108-118,150-154 1qmi d1qmid2 D:49-64,87-93,98-113,115-124,164-174 1eps d1epsa_ A:47-61,87-94,96-110,110-118,150-154 1x8r d1x8ra1 A:47-61,87-93,95-109,108-118,150-154 1qmi d1qmia2 A:49-64,87-93,98-113,115-124,164-174 1qmi d1qmib2 B:49-64,87-93,98-113,115-124,164-174 1qmi d1qmic2 C:49-64,87-93,98-113,115-124,164-174 1rf6 d1rf6d_ D:45-59,85-89,91-105,107-114,146-152 1rf6 d1rf6b_ B:45-59,85-89,91-105,105-114,146-152 1rf6 d1rf6a_ A:45-59,85-89,91-105,107-114,146-152 1qmh d1qmhb2 B:49-64,87-93,98-113,115-124,163-174 1x8t d1x8ta1 A:47-61,87-93,95-109,108-118,150-157 1rf5 d1rf5c_ C:45-59,85-89,91-105,107-114,146-152 1rf5 d1rf5d_ D:45-59,85-89,91-105,105-114,146-152 1rf4 d1rf4b_ B:91-105,157-162,166-181,181-188,212-219 2. c.73.1 Carbamate kinase-like the sheet topology is similar to those of undecaprenyl diphosphate synthase and the N-terminal domain of phosphoglycerate kinase ! Carbamate kinase-like 3 layers: a/b/a; mixed (mainly parallel) beta-sheet of 8 strands, order 34215786; strand 8 is antiparallel to the rest 2buf d2bufa1 A:197-210,212-218,249-266,268-274,292-297 2buf d2bufg1 G:197-210,212-218,249-266,268-274,292-296 2buf d2bufc1 C:197-210,210-218,249-266,268-274,292-296 2bty d2btya1 A:180-193,195-202,231-248,250-257,274-278 2buf d2bufk1 K:197-210,212-218,249-266,268-274,292-296 2buf d2bufb1 B:197-210,212-218,249-266,268-274,292-297 2buf d2bufj1 J:197-210,212-218,249-266,268-274,292-296 1e19 d1e19b_ B:214-227,229-235,270-288,290-296,309-313 1b7b d1b7bc_ C:208-221,223-228,264-283,285-290,302-306 1ohb d1ohba_ A:160-173,173-180,211-229,230-236,253-258 1e19 d1e19a_ A:214-227,229-235,270-288,290-296,309-313 2buf d2buff1 F:197-210,212-218,249-266,268-274,292-296 2buf d2bufd1 D:197-210,212-219,249-266,268-274,292-296 2buf d2bufe1 E:197-210,212-218,249-266,268-274,292-296 2bty d2btyb1 B:180-193,195-201,231-248,250-256,274-278 1b7b d1b7bb_ B:208-221,223-229,264-283,285-291,302-306 2ap9 d2ap9b1 B:194-207,209-216,247-264,266-273,290-295 2buf d2bufh1 H:197-210,212-219,249-266,268-275,292-296 2buf d2bufl1 L:197-210,212-219,249-266,268-274,292-296 2bty d2btyc1 C:180-193,195-201,231-248,250-256,274-278 2ap9 d2ap9f1 F:194-207,209-216,247-264,266-273,290-295 1b7b d1b7ba_ A:208-221,223-229,264-283,285-291,302-306 2ap9 d2ap9d1 D:194-207,209-215,247-264,266-272,290-294 1gs5 d1gs5a_ A:160-173,173-180,211-229,231-236,253-257 1gsj d1gsja_ A:160-173,173-180,211-229,231-236,253-257 1b7b d1b7bd_ D:208-221,223-229,264-283,285-291,302-306 2ij9 d2ij9a1 A:115-128,130-136,181-192,194-199,215-219 2ij9 d2ij9b1 B:115-128,130-136,181-192,194-199,215-219 2ako d2akod1 D:142-154,156-162,206-221,222-228,247-251 2bri d2bria1 A:119-132,134-140,185-196,198-203,220-224 2ako d2akoc1 C:142-154,156-162,206-221,222-228,247-251 2bmu d2bmub1 B:119-132,134-140,185-196,198-203,220-224 2ako d2akoa1 A:142-154,156-162,205-221,222-228,247-251 1oh9 d1oh9a_ A:160-173,174-181,211-229,230-236,253-258 1oha d1ohaa_ A:160-173,174-181,211-229,230-236,253-258 2ako d2akob1 B:142-154,156-162,206-221,222-228,247-251 2bmu d2bmua1 A:119-132,134-140,185-196,198-203,220-224 2buf d2bufi1 I:197-210,212-218,249-267,268-274,292-296 2brx d2brxb1 B:119-132,134-140,185-196,198-203,220-224 2brx d2brxa1 A:119-132,134-140,185-196,198-203,220-224 2bri d2brib1 B:119-132,134-140,185-196,198-203,220-224 2ap9 d2ap9a1 A:194-207,209-216,247-264,266-273,290-294 2ap9 d2ap9e1 E:194-207,209-216,247-264,266-273,290-294 2ap9 d2ap9c1 C:194-207,209-216,247-264,266-273,290-294 2hmf d2hmfd1 D:208-222,224-230,269-280,282-287,295-299 2v4y d2v4yc1 C:144-157,159-165,201-212,214-219,236-240 2hmf d2hmfa1 A:208-222,224-230,269-280,282-287,295-299 2v4y d2v4ye1 E:144-157,159-165,201-212,214-219,236-240 2v4y d2v4yf1 F:144-157,159-165,201-212,214-219,236-240 2hmf d2hmfc1 C:208-222,224-230,269-280,282-287,295-299 2hmf d2hmfb1 B:208-222,224-230,269-280,282-287,295-299 2v4y d2v4yb1 B:144-157,159-165,201-212,214-219,236-240 2v4y d2v4ya1 A:144-157,159-165,201-212,214-219,236-240 2v4y d2v4yd1 D:144-157,159-165,201-212,214-219,236-240 2bnd d2bndb1 B:144-157,158-165,201-212,214-219,236-240 2j0x d2j0xb1 B:199-213,215-221,260-271,272-278,286-290 2j0x d2j0xa1 A:199-213,215-221,260-271,272-278,286-290 2bnd d2bnda1 A:144-157,159-165,201-212,214-219,236-240 2bne d2bneb1 B:144-157,159-165,201-212,214-219,236-240 2bne d2bnea1 A:144-157,159-165,201-212,214-219,236-240 2bnf d2bnfb1 B:144-157,159-165,201-212,214-219,236-240 2bnf d2bnfa1 A:144-157,159-165,201-212,214-219,236-240 1ybd d1ybdb1 B:144-157,159-165,201-212,214-219,236-240 2a1f d2a1fd1 D:141-154,156-162,198-209,211-216,233-237 2a1f d2a1ff1 F:141-154,156-162,198-209,211-216,233-237 2a1f d2a1fa1 A:141-154,156-162,198-209,211-216,233-237 1ybd d1ybdc1 C:144-157,159-165,201-212,214-219,236-240 2a1f d2a1fe1 E:141-154,156-162,198-209,211-216,233-237 2a1f d2a1fb1 B:141-154,156-162,198-209,211-216,233-237 2a1f d2a1fc1 C:141-154,156-162,198-209,211-216,233-237 1ybd d1ybda1 A:144-157,159-165,201-212,214-219,236-240 2j0w d2j0wa1 A:199-213,215-221,260-271,273-278,286-291 1z9d d1z9da1 A:142-155,157-164,200-211,212-219,235-239 1z9d d1z9dc1 C:142-155,157-164,200-211,212-219,235-239 1z9d d1z9db1 B:142-155,157-164,200-211,212-219,235-239 2cdq d2cdqb1 B:231-245,248-254,292-303,305-311,318-322 2cdq d2cdqa1 A:231-245,248-254,292-303,305-311,318-322 3. c.72.1 Ribokinase-like has extra strand located between strands 2 and 3 ! Ribokinase-like core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest ! potential superfamily: members of this fold have similar functions but different ATP-binding sites 2abq d2abqb1 B:163-174,176-181,195-210,212-218,222-228 2dcn d2dcnl1 L:171-187,189-194,206-218,219-225,228-235 2dcn d2dcnj1 J:171-187,189-194,206-218,219-225,228-235 2dcn d2dcnf1 F:171-187,189-194,206-218,219-225,228-235 1wye d1wyec1 C:171-187,189-194,206-218,219-225,228-235 1wye d1wyee1 E:171-187,189-194,206-218,219-225,228-235 2dcn d2dcnc1 C:171-187,189-194,206-218,219-225,228-235 2dcn d2dcnd1 D:171-187,189-194,206-218,219-225,228-235 2dcn d2dcng1 G:171-187,189-194,206-218,219-225,228-235 2dcn d2dcni1 I:171-187,189-194,206-218,219-225,228-235 2dcn d2dcnh1 H:171-187,189-194,206-218,219-225,228-235 2dcn d2dcna1 A:171-187,189-194,206-218,219-225,228-235 2dcn d2dcnb1 B:171-187,189-194,206-218,219-225,228-235 2dcn d2dcnk1 K:171-187,189-194,206-218,219-225,228-235 2dcn d2dcne1 E:171-187,189-194,206-218,219-225,228-235 1wye d1wyed1 D:171-187,189-194,206-218,219-225,228-235 1wye d1wyeb1 B:171-187,189-194,206-218,219-225,228-235 2abq d2abqa1 A:163-174,176-181,195-210,212-219,221-228 1tz3 d1tz3b_ B:168-183,184-189,201-213,215-222,224-231 1wye d1wyef1 F:171-187,189-194,206-218,219-225,228-235 1wye d1wyea1 A:171-187,189-194,206-218,219-225,228-235 1tyy d1tyyb_ B:168-183,184-189,201-213,215-221,224-231 1v19 d1v19a_ A:172-187,188-193,203-212,214-221,223-230 1v1a d1v1ab_ B:172-187,188-193,203-212,214-220,223-230 1v1b d1v1ba_ A:172-187,188-193,203-212,214-221,223-230 2ajr d2ajrb1 B:172-183,187-192,207-223,223-230,232-239 1v1b d1v1bc_ C:172-187,188-193,203-212,214-221,223-230 1v1b d1v1bb_ B:172-187,188-193,203-212,214-221,223-230 1v1b d1v1bd_ D:172-187,188-193,203-212,214-221,223-230 1v1s d1v1sf_ F:172-187,188-193,203-212,214-220,223-230 1v1s d1v1sd_ D:172-187,188-193,203-212,214-220,223-230 1v1s d1v1sc_ C:172-187,188-193,203-212,214-220,223-230 1v1s d1v1se_ E:172-187,188-193,203-212,214-220,223-230 1v1s d1v1sb_ B:172-187,188-193,203-212,214-220,223-230 1v1a d1v1aa_ A:172-187,188-193,203-212,214-220,223-230 1v1s d1v1sa_ A:172-187,188-193,203-212,214-220,223-230 2ajr d2ajra1 A:172-183,187-192,207-222,223-230,232-239 1tz6 d1tz6b_ B:168-183,184-189,205-213,215-222,224-231 2i6a d2i6ad1 D:206-217,218-223,240-251,260-266,270-276 2i6a d2i6ab1 B:206-217,218-223,240-251,260-266,270-276 1vm7 d1vm7b_ B:165-172,173-178,195-207,209-216,218-225 1vm7 d1vm7a_ A:165-172,173-178,195-207,209-216,218-225 2i6a d2i6ac1 C:206-217,218-223,240-251,260-266,270-276 2i6a d2i6aa1 A:206-217,218-223,240-251,260-266,270-276 1lii d1liia_ A:206-217,218-223,241-254,273-278,282-291 1v19 d1v19b_ B:172-184,188-193,203-212,214-220,222-230 1tyy d1tyya_ A:168-183,184-189,205-213,216-221,224-231 1bx4 d1bx4a_ A:206-217,218-223,240-251,260-267,269-276 1tz6 d1tz6a_ A:168-183,184-189,205-213,216-221,224-231 1lik d1lika_ A:206-217,218-223,241-253,273-279,282-291 1tz3 d1tz3a_ A:168-183,184-189,205-213,216-221,224-231 1lij d1lija_ A:206-217,218-223,241-253,273-279,282-291 1l2l d1l2la_ A:275-289,290-295,322-338,340-346,348-355 1esq d1esqc1 C:101-116,118-123,123-132,163-169,171-177 1esq d1esqb1 B:101-116,118-123,149-162,163-169,171-177 1ekq d1ekqa_ A:101-116,118-123,123-131,163-169,171-177 1ekq d1ekqa_ A:101-116,118-123,147-162,163-169,171-177 1dgm d1dgma_ A:206-217,218-223,248-265,273-279,283-291 2a9z d2a9za1 A:206-217,218-223,248-265,273-279,282-291 1c3q d1c3qc1 C:101-116,118-123,123-132,163-169,171-177 2a9y d2a9ya1 A:206-217,218-223,248-265,273-279,282-291 2ab8 d2ab8a1 A:206-217,218-223,248-265,273-279,282-291 1ekq d1ekqb_ B:101-116,118-123,147-162,163-169,171-177 2aa0 d2aa0a1 A:206-217,218-223,248-265,273-279,282-291 1esj d1esja1 A:101-116,118-123,146-162,163-169,171-177 1esq d1esqb1 B:101-116,118-123,123-132,163-169,171-177 2abs d2absa1 A:206-217,218-223,248-265,273-279,282-291 1esq d1esqa1 A:101-116,118-123,123-133,163-169,171-177 1ekk d1ekkb_ B:101-115,118-123,123-132,163-169,171-177 1c3q d1c3qa1 A:101-116,118-123,123-133,163-169,171-177 1jxh d1jxha_ A:118-130,134-139,154-169,171-176,187-192 1jxh d1jxhb_ B:118-130,134-139,154-169,171-176,187-192 1lio d1lioa_ A:206-217,218-224,240-251,273-279,283-287 1ua4 d1ua4a_ A:272-286,287-292,319-335,337-344,345-352 1gc5 d1gc5a_ A:285-299,300-305,329-345,347-354,355-362 1u2x d1u2xa_ A:288-303,304-309,334-350,352-358,360-368 1u2x d1u2xb_ B:288-303,304-309,334-350,352-358,360-368 1ub0 d1ub0a_ A:116-128,132-137,151-166,168-174,181-189 1ekk d1ekka_ A:101-116,118-123,146-162,163-169,171-177 1vi9 d1vi9c_ C:125-135,141-146,146-155,177-184,193-201 1vi9 d1vi9b_ B:125-136,141-146,160-175,177-184,193-201 1vi9 d1vi9a_ A:125-136,141-146,160-175,177-184,193-201 1vi9 d1vi9d_ D:125-136,141-146,160-175,177-184,192-201 1td2 d1td2b_ B:125-136,141-146,146-155,177-184,193-201 1vi9 d1vi9c_ C:125-135,141-146,160-175,177-184,193-201 1vi9 d1vi9b_ B:125-136,141-146,146-155,177-184,193-201 1lhp d1lhpa_ A:129-140,145-150,164-179,181-188,197-208 1vi9 d1vi9a_ A:125-136,141-146,146-155,177-184,193-201 1rfv d1rfva_ A:129-140,145-150,164-179,181-188,197-208 1lhr d1lhra_ A:129-140,145-150,164-179,181-188,197-208 1vi9 d1vi9d_ D:125-136,141-146,146-155,177-184,192-201 1td2 d1td2a_ A:125-136,141-146,146-155,177-184,192-201 1ygk d1ygka1 A:129-140,145-150,164-179,181-188,197-209 1ygj d1ygja1 A:129-140,145-150,164-179,181-187,197-210 1lhr d1lhrb_ B:129-140,145-150,164-179,181-188,197-210 1rfv d1rfvb_ B:129-140,145-150,164-179,181-188,197-210 1lhp d1lhpb_ B:129-140,145-150,164-179,181-188,197-210 1rfu d1rfud_ D:129-140,145-150,164-179,181-188,197-210 1rfu d1rfug_ G:129-140,145-150,164-179,181-188,197-210 1rfu d1rfuc_ C:129-140,145-150,164-179,181-188,197-210 1rfu d1rfue_ E:129-140,145-150,164-179,181-188,197-210 1rft d1rfta_ A:129-140,145-149,164-179,181-188,197-210 1ygj d1ygja1 A:129-140,145-150,150-159,181-187,197-210 2afb d2afba1 A:173-188,189-194,217-233,235-245,248-259 1lhr d1lhrb_ B:129-140,145-150,150-159,181-188,197-210 1rfu d1rfud_ D:129-140,145-150,150-159,181-188,197-210 1rfu d1rfuc_ C:129-140,145-150,150-159,181-188,197-210 1rfu d1rfug_ G:129-140,145-150,150-159,181-188,197-210 1rfu d1rfue_ E:129-140,145-150,150-159,181-188,197-210 4. c.53.1 Resolvase-like Resolvase-like Core: 3 layers: a/b/a; mixed beta-sheet of 5 strands, order 21345; strand 5 is antiparallel to the rest 2rsl d2rslc_ C:45-55,58-65,72-87,87-94,96-100 1gdt d1gdtb2 B:45-56,58-65,72-87,87-94,96-100 2rsl d2rsla_ A:45-55,58-65,72-87,87-94,96-100 1gdt d1gdta2 A:45-56,58-65,72-87,87-94,96-100 1zr2 d1zr2a2 A:45-55,58-65,72-87,88-94,96-100 1zr4 d1zr4b2 B:45-55,58-65,72-87,87-94,96-100 1zr4 d1zr4a2 A:45-55,58-65,72-87,88-94,96-100 2rsl d2rslb_ B:46-55,58-65,72-87,87-94,96-100 1zr4 d1zr4d2 D:45-55,58-65,72-87,87-94,96-100 1zr4 d1zr4e2 E:45-55,58-65,72-87,87-94,96-100 2gm4 d2gm4b2 B:45-55,58-65,72-87,87-94,96-100 2gm4 d2gm4a2 A:45-56,58-65,72-87,87-94,96-100 7. d.160.1 Carbon-nitrogen hydrolase Carbon-nitrogen hydrolase 4 layers: alpha/beta/beta/alpha; mixed beta sheets; contains duplication 1ems d1emsb2 B:27-46,48-55,75-89,90-100,108-117 1ems d1emsa2 A:27-46,48-54,76-89,90-100,107-117 1uf7 d1uf7a_ A:176-187,189-196,210-227,228-235,247-253 1uf8 d1uf8a_ A:176-187,189-196,210-227,228-235,247-253 1uf4 d1uf4b_ B:176-187,189-196,210-227,228-235,247-253 1uf5 d1uf5a_ A:176-187,189-196,210-227,228-235,247-253 1f89 d1f89a_ A:174-185,186-193,203-216,216-223,236-243 1erz d1erza_ A:176-187,189-196,210-227,228-235,247-253 1uf4 d1uf4a_ A:176-187,189-196,210-227,228-235,247-253 1erz d1erzb_ B:176-187,189-196,210-227,228-235,247-253 1uf5 d1uf5b_ B:176-187,189-196,210-227,228-235,247-253 1uf8 d1uf8b_ B:176-187,189-196,210-227,228-235,247-253 1j31 d1j31c_ C:151-162,164-171,174-189,190-197,208-215 1j31 d1j31a_ A:151-162,164-171,174-189,190-197,208-215 2ggl d2ggld1 D:177-188,190-197,211-228,229-236,249-254 2ggl d2ggla1 A:177-188,190-197,211-228,229-236,249-254 1fo6 d1fo6d_ D:177-188,190-197,211-228,229-236,248-254 1fo6 d1fo6a_ A:177-188,190-197,211-228,229-236,249-254 2ggl d2gglb1 B:177-188,190-197,211-228,229-236,249-254 1fo6 d1fo6c_ C:177-188,190-197,211-228,229-236,248-254 2ggl d2gglc1 C:177-188,190-197,211-228,229-236,249-254 2ggk d2ggkd1 D:177-188,190-197,211-228,229-236,248-254 1uf7 d1uf7b_ B:176-187,189-196,210-227,227-235,247-253 2ggk d2ggkb1 B:177-188,190-197,211-228,229-236,249-254 1j31 d1j31b_ B:151-162,164-171,174-189,190-198,208-215 1ems d1emsb2 B:174-185,187-194,203-216,217-225,238-243 2ggk d2ggkc1 C:177-188,190-197,211-228,229-236,249-254 1j31 d1j31d_ D:151-162,164-171,174-189,190-198,208-215 1fo6 d1fo6b_ B:177-188,190-197,211-228,228-236,248-254 1ems d1emsa2 A:174-185,187-194,203-216,217-225,238-243 2ggk d2ggka1 A:177-188,190-197,211-228,229-236,249-254 1f89 d1f89b_ B:474-485,486-494,503-516,516-524,536-543 1j31 d1j31c_ C:15-34,36-41,66-80,81-92,93-104 1j31 d1j31b_ B:15-34,36-41,66-80,81-92,93-104 1j31 d1j31d_ D:15-34,36-41,66-80,81-92,93-104 1j31 d1j31a_ A:15-34,36-41,66-80,81-92,93-104 1f89 d1f89a_ A:24-44,47-54,77-91,92-105,106-118 1f89 d1f89b_ B:324-344,347-354,377-391,392-405,406-418 1uf5 d1uf5b_ B:19-38,40-45,74-88,88-102,103-116 1erz d1erzb_ B:19-38,40-44,74-88,88-102,103-116 1uf4 d1uf4b_ B:19-38,40-44,74-88,88-102,103-116 2ggl d2gglc1 C:20-39,41-45,75-89,89-103,104-117 1uf8 d1uf8b_ B:19-38,40-44,74-88,88-102,103-116 1uf4 d1uf4a_ A:19-38,40-44,74-88,88-102,103-116 1uf7 d1uf7b_ B:19-38,40-44,74-88,88-102,103-116 1uf5 d1uf5a_ A:19-38,40-44,74-88,88-102,103-116 1erz d1erza_ A:19-38,40-44,74-88,88-102,103-116 2ggk d2ggka1 A:20-39,41-46,75-89,89-103,104-118 1fo6 d1fo6b_ B:20-39,41-46,75-89,89-103,104-117 1uf7 d1uf7a_ A:19-38,40-44,74-88,88-102,103-116 2ggk d2ggkb1 B:20-39,41-46,75-89,89-103,104-117 2ggk d2ggkc1 C:20-39,41-45,75-89,89-103,104-117 1uf8 d1uf8a_ A:19-38,40-45,74-88,88-102,103-116 2ggk d2ggkd1 D:20-39,41-46,75-89,89-103,104-117 2ggl d2ggld1 D:20-39,41-45,75-89,89-103,104-117 1fo6 d1fo6d_ D:20-39,41-46,75-89,89-103,104-117 2ggl d2gglb1 B:20-39,41-45,75-89,90-103,104-117 1fo6 d1fo6a_ A:20-39,41-46,75-89,90-103,104-117 1fo6 d1fo6c_ C:20-39,41-46,75-89,90-103,104-117 2ggl d2ggla1 A:20-39,41-46,75-89,90-103,104-117 1ems d1emsa2 A:27-46,48-54,62-77,90-100,107-117 11. c.67.2 PhnH-like single domain protein of similar topology to the core domain of PLP-transferases PLP-dependent transferase-like main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest 2fsu d2fsua1 A:102-110,120-127,154-164,171-179,180-187 13. c.83.1 Aconitase iron-sulfur domain Aconitase iron-sulfur domain consists of three similar domains with 3 layers (a/b/a) each; duplication ! core: parallel beta-sheet of 5 strands, order 32145 6acn d6acna2 A:72-87,94-99,120-135,136-140,516-520 1c96 d1c96a2 A:72-87,94-99,120-135,136-140,516-520 1b0m d1b0ma2 A:72-87,94-99,120-135,136-140,516-520 1c97 d1c97a2 A:72-87,94-99,120-135,136-140,516-520 1nis d1nisa2 A:72-87,94-99,120-135,136-140,516-520 1nit d1nita2 A:72-87,94-99,120-135,136-140,516-520 1fgh d1fgha2 A:72-87,94-99,120-135,136-140,516-520 7acn d7acna2 A:72-87,94-99,120-135,136-140,516-520 8acn d8acna2 A:72-87,94-99,120-135,136-140,516-520 1ami d1amia2 A:72-87,94-99,120-135,136-140,516-520 1aco d1acoa2 A:72-87,94-99,120-135,136-140,516-520 1amj d1amja2 A:72-87,94-99,120-135,136-140,516-520 1b0j d1b0ja2 A:72-87,94-99,120-135,136-140,516-520 1b0k d1b0ka2 A:72-87,94-99,120-135,136-140,516-520 16. c.27.1 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 3 layers: a/b/a; parallel beta-sheet of 5 strands, order 32145; Rossmann-like 2elc d2elca2 A:171-181,186-192,194-209,210-217,227-233 1v8g d1v8gb2 B:171-181,186-192,194-209,210-218,227-233 1brw d1brwa2 A:176-192,194-203,210-229,230-239,427-433 1kgz d1kgza2 A:185-195,200-206,208-223,225-232,243-251 1v8g d1v8ga2 A:171-181,186-192,194-209,210-218,227-233 1khd d1khdc2 C:185-195,200-206,208-223,225-232,243-251 2elc d2elcb2 B:171-181,186-192,194-209,210-218,227-233 2elc d2elcc2 C:171-181,186-192,194-209,210-218,227-233 2elc d2elcd2 D:171-181,186-192,194-209,210-218,227-233 1brw d1brwb2 B:1176-1192,1194-1203,1210-1229,1230-1239,1427-1433 1kgz d1kgzb2 B:185-195,200-206,208-223,225-232,243-251 1khd d1khda2 A:185-195,200-206,208-223,225-232,243-251 1khd d1khdb2 B:185-195,200-206,208-223,225-232,243-251 1khd d1khdd2 D:185-195,200-206,208-223,225-233,242-251 1zxy d1zxyd2 D:171-181,186-192,194-209,211-219,229-238 2gvq d2gvqd2 D:171-181,186-192,194-209,211-219,229-238 2gvq d2gvqc2 C:171-181,186-192,194-209,211-219,229-238 1o17 d1o17d2 D:171-181,186-192,194-209,211-219,229-238 1zyk d1zykd2 D:171-181,186-192,194-209,211-219,229-238 1zxy d1zxya2 A:171-181,186-192,194-209,211-219,229-238 1uou d1uoua2 A:210-226,228-237,244-263,265-273,473-478 1gxb d1gxbc2 C:171-181,186-192,194-209,211-219,229-238 1gxb d1gxbd2 D:171-181,186-192,194-209,211-219,229-238 1zyk d1zyka2 A:171-181,186-192,194-209,211-219,229-238 1zxy d1zxyc2 C:171-181,186-192,194-209,211-219,229-238 1zyk d1zykc2 C:171-181,186-192,194-209,211-219,229-238 1zxy d1zxyb2 B:171-181,186-192,194-209,211-219,229-238 1zyk d1zykb2 B:171-181,186-192,194-209,211-219,229-238 2gvq d2gvqa2 A:171-181,186-192,194-209,211-219,229-238 1gxb d1gxba2 A:171-181,186-192,194-209,211-219,229-238 1o17 d1o17c2 C:171-181,186-192,194-209,211-219,229-238 1o17 d1o17a2 A:171-181,186-192,194-209,211-219,229-238 2gvq d2gvqb2 B:171-181,186-192,194-209,211-219,229-238 1gxb d1gxbb2 B:171-181,186-192,194-209,211-219,229-238 1o17 d1o17b2 B:171-181,186-192,194-209,211-219,229-238 2tpt d2tpta2 A:179-194,197-206,213-232,233-242,433-439 1otp d1otpa2 A:179-194,197-207,213-232,233-243,433-439 27. c.102.1 Cell-division inhibitor MinC, N-terminal domain Cell-division inhibitor MinC, N-terminal domain beta(2)-(alpha-beta)2-beta; 2 layers, a/b; mixed beta-sheet of 5 strands, order 12345; strands 1 & 5 are antiparallel to the rest 1hf2 d1hf2d2 D:20-36,44-51,55-70,72-78,93-99 1hf2 d1hf2a2 A:20-36,43-51,55-70,71-79,92-98 1hf2 d1hf2b2 B:20-36,43-51,55-70,71-78,92-98 29. c.19.1 FabD/lysophospholipase-like FabD/lysophospholipase-like core: 3 layers, a/b/a; mixed beta-sheet of 6 strands, order 432156; strand 4 is antiparallel to the rest 1nm2 d1nm2a1 A:55-76,91-97,96-108,227-232,233-237 1oxw d1oxwa_ A:37-60,71-77,77-88,148-157,160-167 1oxw d1oxwc_ C:2037-2060,2071-2077,2077-2088,2148-2157,2160-2167 1oxw d1oxwb_ B:1037-1060,1071-1077,1077-1088,1148-1157,1160-1167 1cjy d1cjya2 A:197-216,222-227,228-240,325-334,344-350 1cjy d1cjyb2 B:1197-1216,1222-1228,1228-1240,1325-1334,1344-1350 30. c.100.1 Thiamin pyrophosphokinase, catalytic domain Thiamin pyrophosphokinase, catalytic domain 3 layers: a/b/a; parallel beta-sheet of 6 strands, order 432156 1ig3 d1ig3a2 A:119-136,140-146,151-170,172-178,179-187 2f17 d2f17a2 A:99-116,120-126,131-150,152-158,159-169 1ig3 d1ig3b2 B:119-136,140-146,151-165,172-178,179-187 1ig0 d1ig0b2 B:125-141,183-190,195-214,215-223,224-233 1ig0 d1ig0a2 A:125-141,183-190,195-214,215-223,224-233 31. e.72.1 SSO1389-like SSO1389-like 2 domains; d1: [alpha/beta, central parallel beta-sheet of 6 strands, order 321456, Rossmann-like]; d2: [alpha+beta, cluster of helices and a small 4-stranded beta-sheet] 2i71 d2i71a1 A:98-118,120-127,129-153,155-163,176-185 2i71 d2i71b1 B:98-118,120-127,129-153,155-164,172-185 32. c.111.1 Activating enzymes of the ubiquitin-like proteins transfer adenylyl group to the C-terminal carboxyl group of the ubiquitin and MoaD/ThiS-related proteins ! the ATP nucleotide-binding site is similar to that of the NAD-binding Rossmann-folds ! Activating enzymes of the ubiquitin-like proteins 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 32145678; strands 6 and 8 are antiparallel to the rest 1jwb d1jwbb_ B:111-123,123-128,131-146,148-156,157-165 1jwa d1jwab_ B:111-123,123-128,131-146,148-156,157-165 1jw9 d1jw9b_ B:111-123,123-128,131-146,148-156,157-165 1tt5 d1tt5d_ D:131-138,139-144,147-163,175-184,185-194 3dbr d3dbre1 E:108-117,124-130,132-147,149-157,158-166 3dbl d3dblc1 C:108-117,124-130,132-147,149-157,158-166 3dbl d3dble1 E:108-117,124-130,132-147,149-157,158-166 3dbr d3dbra1 A:108-117,124-130,132-147,149-157,158-166 3dbh d3dbha1 A:108-117,124-130,132-147,149-157,158-166 1r4m d1r4ma_ A:108-117,124-130,132-147,149-157,158-166 1r4m d1r4mc_ C:108-117,124-130,132-147,149-157,158-166 1r4m d1r4mg_ G:108-117,124-130,132-147,149-157,158-166 3dbl d3dblb1 B:131-138,139-144,147-163,175-184,185-194 1yov d1yovc1 C:108-117,124-130,132-147,149-157,158-166 3dbl d3dbla1 A:108-117,124-130,132-147,149-157,158-166 1tt5 d1tt5a_ A:108-117,124-130,132-147,149-157,158-166 3dbl d3dbld1 D:131-138,139-144,147-162,175-184,185-193 1yov d1yovd1 D:131-139,139-144,147-162,176-184,185-193 3dbl d3dblf1 F:131-139,139-144,147-162,176-184,185-193 1r4m d1r4mh_ H:131-139,139-144,147-163,176-184,185-193 1r4m d1r4mf_ F:131-139,139-144,147-163,176-184,185-193 1r4m d1r4md_ D:131-139,139-144,147-163,176-184,185-193 1r4m d1r4mb_ B:131-139,139-144,147-163,176-184,185-193 1r4n d1r4nd_ D:131-138,139-144,147-163,175-184,185-193 3dbl d3dblh1 H:131-138,139-144,147-163,175-184,185-193 1r4n d1r4nh_ H:131-138,139-144,147-163,175-184,185-193 1r4n d1r4nf_ F:131-138,139-144,147-163,175-184,185-193 1r4n d1r4nb_ B:131-138,139-144,147-163,175-184,185-193 37. c.53.2 beta-carbonic anhydrase, cab Resolvase-like Core: 3 layers: a/b/a; mixed beta-sheet of 5 strands, order 21345; strand 5 is antiparallel to the rest 1g5c d1g5cf_ F:63-78,80-88,127-142,149-158,161-170 1g5c d1g5ce_ E:63-78,80-88,127-143,149-159,160-170 1g5c d1g5cc_ C:63-78,80-88,127-142,149-159,160-170 1g5c d1g5cb_ B:63-78,80-88,127-142,149-158,161-169 1g5c d1g5ca_ A:63-78,80-88,127-142,149-159,160-170 1ekj d1ekjd_ D:196-211,213-221,265-289,300-310,311-319 1ekj d1ekje_ E:196-211,213-221,265-289,300-310,311-319 1ekj d1ekja_ A:196-211,213-221,265-289,300-310,311-319 1ekj d1ekjh_ H:196-211,213-221,265-289,300-310,311-319 1ddz d1ddzb2 B:435-450,452-460,500-523,536-544,550-557 1ekj d1ekjc_ C:196-211,213-221,288-298,300-310,311-329 1ekj d1ekjb_ B:196-211,213-221,288-298,300-310,311-329 1ekj d1ekjf_ F:196-211,213-221,288-298,300-310,311-329 1ekj d1ekjg_ G:196-211,213-221,288-298,300-310,311-329 1ddz d1ddza2 A:435-450,452-460,500-523,536-545,547-557 1ddz d1ddza1 A:181-196,198-206,246-269,282-291,293-303 1ddz d1ddzb1 B:181-196,198-206,246-269,282-291,293-303 1ekj d1ekjc_ C:196-211,213-221,265-289,300-310,311-329 1ekj d1ekjg_ G:196-211,213-221,265-289,300-310,311-329 1ekj d1ekjf_ F:196-211,213-221,265-289,300-310,311-329 1ekj d1ekjb_ B:196-211,213-221,265-289,300-310,311-329