1. e.62.1 Heme iron utilization protein-like
Heme iron utilization protein-like 2 domains; d1 - 3-helical bundle similar to the homeodomain-like fold; d2 - 6-stranded beta-barrel capped by two helices at one end, similar topology to the PH-like fold
2hq2 d2hq2a1 A:61-69,70-78,239-247,265-272,273-279
2hq2 d2hq2a1 A:61-69,70-78,96-102,265-272,273-279
2j0r d2j0ra1 A:63-71,72-80,241-250,268-275,276-283
1u9t d1u9ta1 A:61-69,70-78,239-247,265-272,273-280
2j0r d2j0ra1 A:63-71,72-80,98-105,268-275,276-283
2j0p d2j0pa1 A:62-71,72-80,242-250,268-275,276-283
1u9t d1u9ta1 A:61-69,70-78,96-103,265-272,273-280
2hq2 d2hq2a1 A:88-94,96-102,131-139,239-247,248-256
2j0p d2j0pa1 A:62-71,72-80,98-105,268-275,276-283
1u9t d1u9ta1 A:87-94,96-103,131-139,239-247,248-256
2j0p d2j0pa1 A:89-96,98-105,133-141,242-250,251-259
2j0r d2j0ra1 A:88-96,98-105,133-141,241-250,251-259
2. f.11.1 Anthrax protective antigen
Anthrax protective antigen 4 domains; I (res. 14-225) and II (226-487) are beta-sandwiches of similar gamma-crystallin like topologies; III (488-594) has a beta-grasp like fold; IV (595-735) has an Ig-like fold
1acc d1acca_ A:16-26,30-39,41-47,191-198,199-206
1t6b d1t6bx_ X:17-25,31-39,41-46,191-198,199-206
3. d.219.1 PP2C-like contain binuclear metal (Mn) centre !
PP2C-like 4 layers: alpha/beta/beta/alpha; antiparallel beta sheets
1a6q d1a6qa2 A:12-19,21-32,37-45,230-239,281-292
1a6q d1a6qa2 A:12-19,21-32,125-136,230-239,281-292
4. d.194.1 CNF1/YfiH-like putative cysteine hydrolases
CNF1/YfiH-like putative cysteine hydrolases 4 layers: alpha/beta/beta/alpha; mixed beta sheets
1t8h d1t8ha_ A:11-16,23-29,107-112,116-123,262-269
1rv9 d1rv9a_ A:16-20,27-34,100-105,109-116,247-255
1rw0 d1rw0a_ A:3-7,14-21,89-94,99-105,235-243
1xaf d1xafb_ B:3-7,14-21,89-94,99-105,235-243
5. b.82.1 RmlC-like cupins
Double-stranded beta-helix one turn of helix is made by two pairs of antiparallel strands linked with short turns ! has appearance of a sandwich of distinct architecture and jelly-roll topology
1sfn d1sfna_ A:1009-1013,1014-1020,1181-1185,1185-1193,1210-1219
1sfn d1sfnb_ B:2009-2013,2014-2020,2181-2185,2185-2193,2210-2219
6. b.43.3 Translation proteins
Reductase/isomerase/elongation factor common domain barrel, closed; n=6, S=10; greek-key
2e1b d2e1ba1 A:21-27,28-34,43-47,53-63,65-73
1efc d1efcb1 B:215-221,223-233,233-238,250-261,270-279
7. b.110.1 Cloacin translocation domain
Cloacin translocation domain complex fold made of several coiled beta-sheets
1rh1 d1rh1a1 A:69-74,138-147,212-217,265-272,279-287
1jch d1jcha2 A:96-101,147-156,215-219,267-272,282-290
1jch d1jchc2 C:96-101,147-156,215-219,267-272,282-290
8. b.69.4 WD40 repeat-like also contains 8-bladed propellers !
7-bladed beta-propeller consists of seven 4-stranded beta-sheet motifs; meander
1erj d1erjc_ C:314-319,320-326,332-343,652-660,661-670
1erj d1erja_ A:314-319,320-326,332-343,652-660,661-670
1erj d1erjb_ B:314-319,320-326,332-343,652-660,661-670
9. d.171.1 Fibrinogen C-terminal domain-like
Fibrinogen C-terminal domain-like unusual fold
1lwu d1lwul1 L:178-187,188-194,214-219,241-251,377-387
1lwu d1lwuc1 C:178-187,188-194,214-219,241-251,377-387
1lwu d1lwui1 I:178-187,188-194,214-219,241-251,377-387
1lwu d1lwuf1 F:178-187,188-194,215-219,241-251,377-387
1fzb d1fzbc1 C:177-186,188-194,214-219,243-253,379-389
10. i.9.1 Blood clotting
Blood clotting
1deq d1deqc_ C:177-186,188-194,215-219,243-253,379-389
1deq d1deqf_ F:177-186,187-194,215-219,243-253,380-389
1deq d1deqp_ P:177-186,187-194,215-219,243-253,380-389
List of motif hits that are not present in SCOP but are found in PDB for pattern ID: 196 (enumeration index: query1591.1592) of S5
3fxl A:12-19,21-32,125-136,230-239,281-292
3fxl A:12-19,21-32,37-45,230-239,281-292
2axc A:88-92,148-156,213-219,261-269,277-284
3m7o A:29-35,37-46,51-56,135-147,149-162
3m7o C:29-35,37-45,51-56,135-147,149-162
3m7o D:29-35,37-46,51-56,135-147,149-162
3m7o B:29-35,37-45,51-56,135-147,149-162
3tez A:18-25,31-39,41-47,191-198,199-206
3fxo A:12-20,21-32,37-45,230-239,281-292
3fxo A:12-20,21-32,125-136,230-239,281-292
3mq3 A:21-27,37-48,199-210,338-346,445-455
3mq3 A:21-27,37-48,53-62,338-346,445-455
2awa B:41-50,51-60,198-204,229-236,237-244
3owv B:69-74,76-81,182-187,234-244,248-256
3owv A:69-73,77-81,182-187,234-244,248-256
3k1q K:317-322,325-332,346-354,368-379,435-447
3k1q U:317-322,325-332,346-354,368-379,435-447
3k1q V:317-322,325-332,346-354,368-379,435-447
3k1q O:317-322,325-332,346-354,368-379,435-447
3k1q J:317-322,325-332,346-354,368-379,435-447
3fxi C:21-28,29-37,44-50,128-141,142-156
3fxi D:21-28,29-37,44-50,128-141,142-156
3eq2 B:170-175,176-185,266-277,329-335,383-391
3eq2 B:170-175,176-185,191-200,329-335,383-391
3eq2 A:171-175,176-184,266-277,329-336,384-390
3eq2 A:171-175,176-184,191-199,329-336,384-390
3oep A:412-420,421-427,436-440,443-448,452-458
3t6q C:29-35,37-45,51-56,135-147,149-162
3t6q D:29-35,37-45,51-56,135-147,149-162
3i2m X:45-53,55-63,241-248,275-284,290-299
3fxk A:12-20,21-32,37-45,230-239,281-292
3fxk A:12-20,21-32,125-136,230-239,281-292
2fhd A:364-370,376-381,403-409,420-427,475-479
2hdn D:215-221,223-233,233-238,250-261,270-279
2hdn B:215-221,223-233,233-238,250-261,270-279
3mtx B:24-31,32-41,46-51,131-142,144-157
3mtx A:24-31,32-41,46-51,131-142,144-157
3mhz A:18-25,31-39,41-47,191-198,199-206
2z64 C:22-28,29-37,44-50,129-141,142-155
3f79 B:171-175,176-185,191-200,328-335,383-392
3f79 A:171-175,176-185,266-277,328-335,383-392
3f79 D:171-175,176-185,266-277,328-335,383-392
3f79 A:171-175,176-185,191-200,328-335,383-392
3f79 C:171-175,176-185,191-199,328-335,383-392
3f79 B:171-175,176-185,266-277,328-335,383-392
3f79 E:171-175,176-185,266-277,328-335,383-392
3f79 F:171-175,176-185,191-200,328-335,383-392
3f79 E:171-175,176-185,191-200,328-335,383-392
3f79 F:171-175,176-185,266-277,328-335,383-392
3f79 D:171-175,176-185,191-199,328-335,383-392
3g65 B:47-56,58-67,71-76,249-260,262-273
3k4x A:432-441,442-451,599-605,631-639,643-652
3tew A:18-25,31-39,41-47,191-198,199-206
3n3c A:21-27,37-48,199-210,338-347,445-455
3n3c A:21-27,37-48,53-62,338-347,445-455
3opf C:412-420,421-427,436-440,443-449,450-458
3fna A:246-252,254-261,286-290,311-317,318-325
2e1v A:120-125,244-252,399-409,414-421,427-435
2e1v B:120-125,243-252,399-409,414-421,427-436
2isn B:3-11,12-23,28-36,269-277,322-333
2isn A:3-11,12-23,259-268,269-277,322-333
2isn B:3-11,12-23,100-115,269-277,322-333
2isn B:3-11,12-23,259-268,269-277,322-333
2isn A:3-11,12-23,101-115,269-277,322-333
2isn A:3-11,12-23,28-36,269-277,322-333
2e1t B:120-125,243-252,403-409,414-421,427-436
2e1t A:120-125,244-252,399-409,414-420,427-435
3p16 B:52-61,62-70,200-207,238-245,246-253
3p16 D:52-61,62-70,200-207,238-245,246-253
3p16 F:53-61,62-70,199-207,238-245,246-253
3hwo A:116-123,146-159,338-346,346-353,354-365
3f7a B:170-175,176-185,191-200,328-336,383-392
3t0p A:42-49,50-57,188-195,221-228,229-236
3t0p B:42-49,50-57,188-195,221-228,229-236
2e1u B:120-125,243-252,399-409,414-421,427-436
2e1u A:120-125,243-252,399-409,414-421,427-436
3ubq E:83-90,113-116A,163-171,174-186,255-263
3mu3 B:24-31,32-41,46-51,131-142,144-157
3mu3 A:24-31,32-41,46-51,131-142,144-157
3e4v B:38-44,47-53,111-115,117-128,135-147
3e4v A:38-44,47-53,111-115,117-128,135-147
3b2d D:29-36,37-45,51-56,135-147,149-162
3b2d C:29-36,37-45,51-56,135-147,149-162
2z0l C:45-54,56-64,237-244,271-281,287-296
2z0l D:45-54,56-64,237-244,271-281,287-296
3rg1 O:26-33,34-43,48-53,133-144,146-158
3rg1 K:26-32,35-43,48-53,134-144,146-157
3rg1 P:26-33,34-43,48-53,135-144,146-157
3rg1 G:26-33,34-43,48-53,133-144,146-158
3rg1 D:26-33,34-43,48-53,133-144,146-158
3rg1 C:26-33,34-43,48-53,133-144,146-158
3rg1 L:26-33,34-43,48-53,133-144,146-158
3rg1 H:26-33,34-43,48-53,132-144,146-159
3hxj A:59-63,78-84,275-282,306-313,315-322
3hxj A:59-63,78-84,260-264,306-313,315-322
3hxj C:59-63,78-84,275-282,306-313,315-322
3hxj D:59-63,78-84,275-282,306-313,315-322
3hxj C:59-63,78-84,260-264,306-313,315-322
3hxj B:59-63,78-84,260-264,306-313,315-322
3hxj B:59-63,78-84,275-282,306-313,315-322
3hxj D:59-63,78-84,260-264,306-313,315-322
3tex A:18-25,31-39,41-47,191-198,199-206
2j04 D:269-274,282-288,575-582,655-662,664-671
2j04 D:269-274,282-288,613-624,655-662,664-671
2j04 B:269-274,282-288,613-618,655-662,664-671
2xr7 A:115-120,238-246,400-407,413-421,427-435
2pnq B:22-27,37-48,199-210,338-347,445-455
2pnq A:22-27,37-48,53-62,338-347,445-455
2pnq B:22-27,37-48,53-62,338-347,445-455
2pnq A:22-27,37-48,199-210,338-347,445-455
2e56 A:21-28,29-37,44-50,129-140,144-156
2e59 A:21-28,29-37,44-50,129-140,144-156
3a1j C:47-56,58-67,217-224,249-260,262-273
3a1j C:47-56,58-67,71-76,249-260,262-273
2z65 C:21-27,29-37,44-50,130-140,144-156
2z65 D:21-27,29-37,44-50,130-140,144-156
2p8e A:8-19,22-32,130-141,234-243,285-295
2p8e A:8-19,22-32,37-45,234-243,285-295
2p8e B:8-19,22-32,130-141,234-243,285-295
2p8e B:8-19,22-32,37-45,234-243,285-295
3tey A:18-26,30-39,41-47,191-198,199-206
2i0o A:9-20,21-32,37-45,509-518,569-578
2i0o A:9-20,21-32,406-415,509-518,569-578
3fxm A:12-20,21-32,37-45,230-239,281-292
3fxm A:12-20,21-32,125-136,230-239,281-292
2i44 C:20-27,28-39,44-53,264-273,316-328
2i44 A:20-27,28-39,141-154,264-273,316-328
2i44 C:20-27,28-39,141-154,264-273,316-328
2i44 B:20-27,28-39,141-154,264-273,316-328
2i44 A:20-27,28-39,44-52,264-273,316-328
2i44 B:20-27,28-39,44-53,264-273,316-328
3es2 A:170-175,176-186,266-277,330-335,382-391
3es2 B:170-175,176-186,191-198,330-335,382-390
3es2 A:170-175,176-186,191-200,330-335,382-391
3es2 B:170-175,176-186,266-277,330-335,382-390
2avt A:173-182,183-192,324-330,355-362,367-374
2avt B:41-50,51-60,198-204,229-236,237-244
2avt B:173-182,183-192,324-330,355-362,367-374
2avt A:41-50,51-60,198-204,229-236,237-244
3fxj A:12-20,21-32,37-45,230-239,281-291
3fxj A:12-20,21-32,125-136,230-239,281-291
3ghg L:177-186,188-194,214-219,244-253,380-388
2hpc L:177-185,189-194,215-219,243-252,380-389
2hpc F:177-185,189-194,215-219,243-252,380-389