1. c.68.1 Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases 3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest 2bo8 d2bo8f1 F:95-100,107-121,123-129,165-170,205-211 2bo8 d2bo8e1 E:95-100,107-121,123-129,165-170,205-211 2bo7 d2bo7h1 H:95-100,107-121,123-129,165-170,205-211 2bo7 d2bo7f1 F:95-100,107-121,123-129,165-170,205-211 2bo7 d2bo7i1 I:95-100,107-121,123-129,165-170,205-211 2bo7 d2bo7a1 A:95-100,107-121,123-129,165-170,205-211 2bo7 d2bo7d1 D:95-100,107-121,123-129,165-170,205-211 2bo8 d2bo8a1 A:95-100,107-121,123-129,165-170,205-211 2bo7 d2bo7e1 E:95-100,107-121,123-129,165-170,205-211 2bo7 d2bo7j1 J:95-100,107-121,123-129,165-170,205-211 1xhb d1xhba2 A:203-208,217-230,231-237,295-299,332-338 2bo4 d2bo4d1 D:95-100,107-121,123-129,165-170,205-211 2bo7 d2bo7g1 G:95-100,107-121,123-129,165-170,205-211 2bo7 d2bo7b1 B:95-100,107-121,123-129,165-170,205-211 2bo8 d2bo8c1 C:95-100,107-121,123-129,165-170,205-211 2bo7 d2bo7c1 C:95-100,107-121,123-129,165-170,205-211 2bo8 d2bo8h1 H:95-100,107-121,123-129,165-170,204-211 2bo4 d2bo4c1 C:95-101,107-121,123-129,166-170,205-211 2bo8 d2bo8i1 I:95-100,107-121,123-129,165-170,204-211 2bo4 d2bo4a1 A:95-101,107-121,123-129,166-170,205-211 2bo4 d2bo4e1 E:95-101,107-121,123-129,166-170,205-211 2bo8 d2bo8j1 J:95-100,107-121,123-129,165-170,204-211 2bo8 d2bo8g1 G:95-100,107-121,123-129,165-170,203-211 2bo8 d2bo8d1 D:95-100,107-121,123-129,165-170,203-211 2bo4 d2bo4f1 F:95-99,107-121,123-129,166-170,205-211 2bo6 d2bo6b1 B:95-99,107-121,123-129,166-170,205-211 1wvc d1wvca_ A:124-130,137-149,151-158,190-195,222-228 2bo6 d2bo6a1 A:95-100,107-121,123-129,166-170,205-211 2bo4 d2bo4b1 B:95-100,107-121,123-130,165-170,205-212 2bo8 d2bo8b1 B:95-100,107-121,123-129,165-170,203-211 1jv3 d1jv3a_ A:245-252,261-272,274-282,329-334,391-397 1jv1 d1jv1a_ A:245-252,261-272,274-282,329-334,391-397 1tzf d1tzfa_ A:124-130,137-149,151-158,190-195,222-228 1vm8 d1vm8b_ B:245-252,261-272,274-282,329-334,391-397 1jvg d1jvga_ A:245-252,261-272,274-282,329-334,391-397 2am3 d2am3a1 A:206-212,219-235,236-243,269-274,303-309 1jvg d1jvgb_ B:245-252,261-272,274-282,329-334,391-397 1jvd d1jvda_ A:245-252,261-272,274-282,329-334,391-397 1jv3 d1jv3b_ B:245-252,261-272,274-282,329-334,391-397 1jv1 d1jv1b_ B:245-252,261-272,274-282,329-334,391-397 2am4 d2am4a1 A:206-212,217-228,236-243,269-274,303-309 1jvd d1jvdb_ B:245-252,261-272,274-282,329-334,391-397 2am5 d2am5a1 A:206-212,217-228,236-243,269-274,303-309 1foa d1foaa_ A:206-212,219-235,236-243,269-274,303-309 1fo8 d1fo8a_ A:206-212,217-228,236-243,269-274,303-309 2apc d2apca1 A:206-212,217-228,236-243,269-274,303-309 1fo9 d1fo9a_ A:206-212,217-228,236-243,269-274,303-309 1hm9 d1hm9a2 A:94-101,107-122,124-132,171-176,211-217 1hm9 d1hm9b2 B:94-101,107-122,124-132,171-176,211-217 1vm8 d1vm8a_ A:245-252,261-272,274-282,329-334,391-397 1omz d1omza_ A:145-151,157-172,174-178,215-221,261-266 1on6 d1on6b_ B:145-151,157-172,174-178,215-221,261-266 1on6 d1on6a_ A:145-151,157-172,174-178,215-221,261-266 1on8 d1on8a_ A:145-151,157-172,174-178,215-221,261-266 1omz d1omzb_ B:145-151,157-172,174-178,215-221,261-266 2i5e d2i5ea1 A:87-92,99-109,112-119,121-129,156-160 1g97 d1g97a2 A:94-101,107-122,124-132,171-177,211-217 1ga8 d1ga8a_ A:98-103,111-118,124-128,155-160,199-203 1fwy d1fwya2 A:97-104,110-122,124-133,172-176,210-216 1on8 d1on8b_ B:145-151,157-172,174-178,215-221,261-266 1omx d1omxb_ B:145-151,157-172,174-178,215-221,261-266 1s4n d1s4na_ A:241-246,259-268,270-274,328-333,377-381 2q4j d2q4jb2 B:214-220,229-240,242-250,296-300,345-351 2icy d2icyb2 B:215-221,229-240,242-250,296-300,345-351 1g95 d1g95a2 A:94-101,107-122,124-132,172-176,211-217 1s4o d1s4ob_ B:241-246,259-268,270-274,328-333,377-381 2icx d2icxb2 B:215-221,229-240,242-250,296-300,345-351 1omx d1omxa_ A:145-152,157-172,174-178,215-221,261-266 1yp2 d1yp2c2 C:137-143,151-163,165-173,231-236,268-274 2icx d2icxa2 A:215-221,229-240,242-250,296-300,345-351 1s4n d1s4nb_ B:241-246,259-268,270-274,328-333,377-381 1yp3 d1yp3d2 D:137-144,151-163,165-173,231-236,268-274 1s4o d1s4oa_ A:241-246,259-268,270-274,328-333,377-381 1z90 d1z90b2 B:215-221,229-240,242-250,296-300,345-351 2q4j d2q4ja2 A:215-220,229-240,242-250,296-300,345-351 1yp4 d1yp4a2 A:137-144,151-163,165-173,231-236,268-274 1s4p d1s4pa_ A:241-246,259-268,270-274,328-333,377-381 1s4p d1s4pb_ B:241-246,259-268,270-274,328-333,377-381 1hm8 d1hm8b2 B:94-101,107-122,124-132,172-176,211-217 1w77 d1w77a1 A:173-180,186-201,201-209,236-241,273-278 1z90 d1z90a2 A:215-221,229-240,242-250,296-300,345-351 1yp4 d1yp4c2 C:137-144,151-163,165-173,231-236,268-274 2icy d2icya2 A:215-221,229-240,242-250,296-300,346-351 1yp3 d1yp3a2 A:137-144,151-163,165-173,231-236,268-274 2dpw d2dpwa1 A:86-92,98-109,113-121,147-152,209-215 1vpa d1vpab_ B:96-103,109-124,124-132,157-162,190-195 1yp3 d1yp3c2 C:137-144,151-163,165-173,231-236,268-274 1hm0 d1hm0b2 B:94-101,107-122,124-132,172-176,211-217 1hm0 d1hm0a2 A:94-101,107-122,124-132,172-176,211-217 1vgz d1vgza_ A:103-109,116-131,132-140,166-171,200-206 1vpa d1vpaa_ A:96-103,109-124,124-132,157-162,190-195 1vgz d1vgzb_ B:103-109,116-131,132-140,166-171,200-206 2oi5 d2oi5a2 A:97-104,110-122,125-133,172-176,211-216 1hm8 d1hm8a2 A:94-101,107-122,124-132,172-177,211-217 2cu2 d2cu2a2 A:101-108,114-130,133-140,188-193,243-249 1eyr d1eyra_ A:97-104,111-123,128-136,177-182,196-202 1ezi d1ezia_ A:97-104,111-122,128-136,177-182,196-202 1fwy d1fwyb2 B:97-104,110-122,125-133,172-176,211-216 2oi6 d2oi6a2 A:97-104,110-122,125-133,172-176,211-216 2oi7 d2oi7a2 A:97-104,110-122,125-133,172-176,211-216 1eyr d1eyrb_ B:97-104,111-123,128-136,177-182,196-202 1fxj d1fxja2 A:97-104,110-121,125-133,172-176,211-216 1h4c d1h4ca_ A:93-100,106-118,121-128,135-140,166-172 1h4d d1h4da_ A:93-100,106-118,121-128,135-140,166-172 1gq9 d1gq9a_ A:90-97,103-118,121-129,175-179,211-217 1vic d1vica_ A:93-99,105-120,122-130,188-192,225-230 1e5k d1e5ka_ A:93-100,106-118,121-128,135-140,166-172 1frw d1frwa_ A:93-100,108-118,121-128,135-140,166-172 1h6j d1h6jb_ B:90-95,103-118,121-129,175-179,212-217 1fr9 d1fr9a_ A:93-100,108-118,121-128,135-140,166-172 1hjj d1hjja_ A:93-100,106-118,121-128,135-140,166-172 1h6j d1h6ja_ A:90-95,103-118,121-129,175-179,212-217 1h4e d1h4ea_ A:93-100,106-118,121-128,135-140,166-172 1h7e d1h7eb_ B:90-95,103-118,121-129,175-179,212-217 1hjl d1hjla_ A:93-100,106-118,121-128,135-140,166-172 2i5e d2i5eb1 B:86-92,99-109,112-119,121-129,156-160 1h7e d1h7ea_ A:90-95,103-118,121-129,175-179,212-217 1yp2 d1yp2b2 B:137-143,151-163,165-174,231-236,268-274 1fxj d1fxjb2 B:97-104,110-121,125-133,172-176,211-216 2oi7 d2oi7b2 B:97-104,110-121,125-133,172-176,211-216 1h7t d1h7tb_ B:90-95,103-118,121-129,175-179,212-217 1qwj d1qwja_ A:135-141,148-163,165-174,214-219,232-238 1hv9 d1hv9a2 A:97-104,110-121,125-133,172-176,211-216 1vic d1vicb_ B:93-99,105-120,122-130,188-192,225-230 1h7t d1h7ta_ A:90-95,103-118,121-129,175-179,212-217 1h7f d1h7fa_ A:90-95,103-118,121-129,175-179,212-217 1yp2 d1yp2d2 D:137-143,151-163,165-174,231-236,268-274 1qwj d1qwjd_ D:135-141,148-163,165-174,214-219,232-238 1gq9 d1gq9b_ B:90-95,103-118,121-129,175-179,211-217 1h7h d1h7hb_ B:90-95,103-118,121-129,175-179,212-217 1h7f d1h7fb_ B:90-95,103-118,121-129,175-179,212-217 1h7g d1h7ga_ A:90-95,103-118,121-129,175-179,212-217 1qwj d1qwjc_ C:135-141,148-163,165-174,214-219,232-238 1h7g d1h7gb_ B:90-95,103-118,121-129,175-179,212-217 1h7h d1h7ha_ A:90-95,103-118,121-129,175-179,212-217 1gqc d1gqca_ A:90-95,103-118,121-129,175-179,211-217 1hv9 d1hv9b2 B:97-104,110-121,125-133,172-176,211-216 1yp2 d1yp2a2 A:137-143,151-163,165-174,231-236,268-274 1mp5 d1mp5b_ B:103-110,116-129,132-140,175-181,212-218 1yp3 d1yp3b2 B:137-143,151-163,165-174,231-236,268-274 2oi5 d2oi5b2 B:97-104,110-121,125-133,172-176,211-216 2oi6 d2oi6b2 B:97-104,110-121,125-133,172-176,211-216 1qwj d1qwjb_ B:135-141,148-163,165-174,214-219,232-238 1gqc d1gqcb_ B:90-95,103-118,121-129,175-179,211-217 1vh1 d1vh1d_ D:93-99,105-120,122-130,184-188,220-226 1ezi d1ezib_ B:97-104,111-122,128-136,177-182,196-202 1yp4 d1yp4d2 D:138-143,151-163,165-174,231-236,268-274 1iin d1iinb_ B:103-110,116-129,132-140,175-181,212-218 1vh1 d1vh1a_ A:93-99,105-120,122-130,184-188,220-226 1lvw d1lvwc_ C:100-107,115-126,129-137,172-178,209-216 1iin d1iina_ A:103-110,116-129,132-140,175-181,212-218 1lvw d1lvwd_ D:100-107,115-126,129-137,172-178,209-216 1h5s d1h5sa_ A:103-110,118-130,132-140,175-181,212-218 1lvw d1lvwa_ A:100-107,115-126,129-137,172-178,209-216 1h5t d1h5ta_ A:103-110,118-130,132-140,175-181,212-218 1h5r d1h5ra_ A:103-110,118-130,132-140,175-181,212-218 1lvw d1lvwb_ B:100-107,115-126,129-137,172-178,209-216 1h5r d1h5rd_ D:103-110,118-129,132-140,175-181,212-218 1iim d1iimb_ B:103-110,118-129,132-140,175-181,212-218 1iin d1iinc_ C:103-110,118-129,132-140,175-181,212-218 1iin d1iind_ D:103-110,118-129,132-140,175-181,212-218 1mp5 d1mp5a_ A:103-110,116-129,132-140,175-181,212-218 1yp4 d1yp4b2 B:137-144,151-163,165-174,232-236,268-274 1mp4 d1mp4a_ A:103-110,116-129,132-140,175-181,212-218 1h5r d1h5rb_ B:103-110,118-129,132-140,175-181,212-218 1mp3 d1mp3b_ B:103-110,118-129,132-140,175-181,212-218 1h5r d1h5rc_ C:103-110,118-129,132-140,175-181,212-218 1h5s d1h5sc_ C:103-110,118-129,132-140,175-181,212-218 1mc3 d1mc3b_ B:100-107,115-127,129-137,172-178,209-215 1h5s d1h5sd_ D:103-110,118-129,132-140,175-181,212-218 1mp5 d1mp5c_ C:103-110,118-129,132-140,175-181,212-218 1iim d1iima_ A:103-110,118-129,132-140,175-181,212-218 1h5s d1h5sb_ B:103-110,118-129,132-140,175-181,212-218 1h5t d1h5tc_ C:103-110,118-129,132-140,175-181,212-218 1h5t d1h5td_ D:103-110,118-129,132-140,175-181,212-218 1h5t d1h5tb_ B:103-110,118-129,132-140,175-181,212-218 1mp4 d1mp4b_ B:103-110,116-130,132-140,175-181,212-218 1mp3 d1mp3a_ A:103-110,118-129,132-140,175-181,212-218 1fzw d1fzwf_ F:102-109,117-129,131-139,174-180,211-217 1mp5 d1mp5d_ D:103-110,118-129,132-140,175-181,212-218 1g3l d1g3ld_ D:102-109,117-129,131-139,174-180,211-217 1g0r d1g0rd_ D:102-109,117-129,131-139,174-180,211-217 1g0r d1g0rf_ F:102-109,117-129,131-139,174-180,211-217 1fxo d1fxoe_ E:102-109,117-129,131-139,174-180,211-217 1fxo d1fxoc_ C:102-109,117-129,131-139,174-180,211-217 1w55 d1w55a1 A:90-97,103-114,118-126,148-152,179-185 1fxo d1fxof_ F:102-109,117-129,131-139,174-180,211-217 1fzw d1fzwd_ D:102-109,117-129,131-139,174-180,211-217 1fxo d1fxod_ D:102-109,117-129,131-139,174-180,211-217 1fxo d1fxob_ B:102-109,117-129,131-139,174-180,211-217 1g3l d1g3lb_ B:102-109,117-129,131-139,174-180,211-217 1g0r d1g0rc_ C:102-109,117-129,131-139,174-180,211-217 1g2v d1g2vd_ D:102-109,117-129,131-139,174-180,211-217 1fzw d1fzwe_ E:102-109,117-129,131-139,174-180,211-217 1fxo d1fxoh_ H:102-109,117-129,131-139,174-180,211-217 1g1l d1g1lf_ F:102-109,117-129,131-139,174-180,211-217 1fzw d1fzwc_ C:102-109,117-129,131-139,174-180,211-217 1g2v d1g2vh_ H:102-109,117-129,131-139,174-180,211-217 1g0r d1g0re_ E:102-109,117-129,131-139,174-180,211-217 1mc3 d1mc3a_ A:100-107,115-127,129-137,172-178,209-215 1g1l d1g1lc_ C:102-109,117-129,131-139,174-180,211-217 1g1l d1g1ld_ D:102-109,117-129,131-139,174-180,211-217 1g2v d1g2vg_ G:102-109,117-129,131-139,174-180,211-217 1fzw d1fzwb_ B:102-109,117-129,131-139,174-180,211-217 1g3l d1g3lc_ C:102-109,117-129,131-139,174-180,211-217 1g2v d1g2vc_ C:102-109,117-129,131-139,174-180,211-217 1g3l d1g3la_ A:102-109,117-129,131-139,174-180,211-217 1fxo d1fxog_ G:102-109,117-129,131-139,174-180,211-217 1fzw d1fzwh_ H:102-109,117-129,131-139,174-180,211-217 1g0r d1g0rh_ H:102-109,117-129,131-139,174-180,211-217 1g1l d1g1le_ E:102-109,117-129,131-139,174-180,211-217 1g23 d1g23f_ F:102-109,117-129,131-139,174-180,211-217 1g23 d1g23d_ D:102-109,117-129,131-139,174-180,211-217 1g1l d1g1lg_ G:102-109,117-129,131-139,174-180,211-217 1g23 d1g23h_ H:102-109,117-129,131-139,174-180,211-217 1g23 d1g23a_ A:102-109,117-129,131-139,174-180,211-217 1fxo d1fxoa_ A:102-109,117-129,131-139,174-180,211-217 1g23 d1g23c_ C:102-109,117-129,131-139,174-180,211-217 1w57 d1w57a1 A:90-97,103-114,118-126,148-152,179-185 1g1l d1g1lb_ B:102-109,117-129,131-139,174-180,211-217 1g23 d1g23e_ E:102-109,117-129,131-139,174-180,211-217 1g23 d1g23b_ B:102-109,117-129,131-139,174-180,211-217 1g0r d1g0rb_ B:102-109,117-129,131-139,174-180,211-217 1g23 d1g23g_ G:102-109,117-129,131-139,174-180,211-217 1fzw d1fzwg_ G:102-109,117-129,131-139,174-180,211-217 1g2v d1g2vb_ B:102-109,117-129,131-139,174-180,211-217 1g2v d1g2va_ A:102-109,117-129,131-139,174-180,211-217 1g0r d1g0ra_ A:102-109,117-129,131-139,174-180,211-217 1g2v d1g2ve_ E:102-109,117-129,131-139,174-180,211-217 1g0r d1g0rg_ G:102-109,117-129,131-139,174-180,211-217 1g2v d1g2vf_ F:102-109,117-129,131-139,174-180,211-217 1fzw d1fzwa_ A:102-109,117-129,131-139,174-180,211-217 1g1l d1g1la_ A:102-109,117-129,131-139,174-180,211-217 1g1l d1g1lh_ H:102-109,117-129,131-139,174-180,211-217 1ini d1inia_ A:101-107,113-127,130-137,165-170,202-206 1vgw d1vgwd_ D:103-109,116-130,133-140,166-171,200-206 1vh3 d1vh3a_ A:93-99,105-120,123-130,187-192,225-229 1vgw d1vgwa_ A:103-109,116-130,133-140,166-171,201-206 1vgw d1vgwc_ C:103-109,116-130,133-140,166-171,201-206 1vh3 d1vh3b_ B:93-99,105-120,123-130,187-192,225-229 1vh1 d1vh1b_ B:93-99,105-120,123-130,183-188,221-226 1vgw d1vgwe_ E:103-109,116-131,133-140,166-171,201-206 1vgw d1vgwf_ F:103-109,116-130,133-140,166-171,201-206 1vh1 d1vh1c_ C:93-99,105-120,123-130,184-188,221-226 1i52 d1i52a_ A:101-107,113-127,130-137,166-170,202-207 1vgw d1vgwb_ B:103-108,116-131,133-140,167-171,201-205 3. e.38.1 Release factor Release factor 4 domains: (1) 3-helical bundle; (2) alpha+beta of ferredoxin-like fold (3 and 4) alpha+beta of dsRDB-like fold 1gqe d1gqea_ A:127-135,137-160,196-204,213-225,323-329 2b3t d2b3tb1 B:110-120,121-143,179-187,196-208,305-313 1rq0 d1rq0b_ B:486-497,497-520,556-564,573-585,683-689 1rq0 d1rq0c_ C:886-897,897-920,956-964,973-985,1083-1089 1rq0 d1rq0a_ A:86-97,97-120,156-164,173-185,283-289 2fvo d2fvoa1 A:85-97,97-120,156-164,173-185,283-289 5. c.56.6 LigB-like circular permutation of the common fold, most similar to the PNP fold ! Phosphorylase/hydrolase-like core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops 1b4u d1b4ud_ D:2-11,30-46,256-269,270-281,291-296 1b4u d1b4ud_ D:2-11,126-138,256-269,270-281,291-296 1b4u d1b4ub_ B:2-11,126-138,256-269,270-281,291-296 1bou d1boud_ D:2-11,126-138,256-269,270-281,291-296 1b4u d1b4ub_ B:2-11,30-47,256-269,270-281,291-296 1bou d1boub_ B:2-11,126-138,256-269,270-281,291-296 1bou d1boud_ D:2-11,30-47,256-269,270-281,291-296 1bou d1boub_ B:2-11,30-47,256-269,270-281,291-296