1. e.17.1 D-aminoacid aminotransferase-like PLP-dependent enzymes
D-aminoacid aminotransferase-like PLP-dependent enzymes 2 domains: (1) alpha+beta: beta3-alpha2-beta2; (2) alpha/beta, a part of its mixed sheet forms barrel: n=6, S=8
1iye d1iyeb_ B:33-44,47-52,74-90,93-102,302-306
1i1k d1i1kc_ C:1033-1044,1047-1052,1074-1090,1093-1102,1302-1306
1i1k d1i1ka_ A:33-44,47-52,74-90,93-102,302-306
1i1k d1i1kb_ B:533-544,547-552,574-590,593-602,802-806
1a3g d1a3gc_ C:33-44,48-52,74-90,93-102,302-306
1a3g d1a3gb_ B:33-44,48-52,74-90,93-102,302-306
1a3g d1a3ga_ A:33-44,48-52,74-90,93-102,302-306
1ekv d1ekva_ A:72-84,86-92,113-129,137-149,361-365
2hhf d2hhfa1 A:72-84,86-92,113-129,137-149,361-365
1kt8 d1kt8b_ B:572-583,587-592,613-629,637-650,861-865
1ekv d1ekvb_ B:72-84,86-92,113-129,137-150,361-365
2a1h d2a1hb1 B:72-84,86-92,113-129,137-150,361-365
1ekp d1ekpa_ A:72-84,86-92,113-129,137-150,361-365
2a1h d2a1ha1 A:72-84,86-92,113-129,137-150,361-365
1ekp d1ekpb_ B:72-84,86-92,113-129,137-150,361-365
1ekf d1ekfa_ A:72-84,86-92,113-129,137-150,361-365
1ekf d1ekfb_ B:72-84,86-92,113-129,137-150,361-365
2hhf d2hhfb1 B:572-584,586-592,613-629,637-650,861-865
1kta d1ktab_ B:572-584,586-592,613-629,637-650,861-865
1kta d1ktaa_ A:72-84,86-92,113-129,137-150,361-365
1kt8 d1kt8a_ A:72-84,86-92,113-129,137-150,361-365
2. b.35.1 GroES-like
GroES-like contains barrel, partly opened; n*=4, S*=8; meander
1e3i d1e3ib1 B:5-16,21-30,46-55,61-65,133-137
1e3l d1e3la1 A:5-16,21-30,46-55,61-65,133-137
1hdy d1hdya1 A:5-16,21-30,46-55,61-65,129-133
1e3l d1e3lb1 B:5-16,21-30,46-55,61-65,133-137
1e3e d1e3eb1 B:5-16,21-30,46-55,61-65,133-137
2ohx d2ohxa1 A:5-16,21-30,46-55,61-65,129-133
1cdo d1cdoa1 A:5-16,21-30,46-57,62-66,130-134
1lde d1ldeb1 B:5-16,21-30,46-55,61-65,129-133
1lde d1ldec1 C:5-16,21-30,46-55,61-65,129-133
2fzw d2fzwa1 A:3-14,19-28,44-53,60-64,128-132
1m6h d1m6hb1 B:3-14,19-28,44-53,60-64,128-132
1hsz d1hsza1 A:5-16,21-30,46-55,61-65,129-133
1hf3 d1hf3b1 B:5-16,21-30,46-55,61-65,129-133
1m6w d1m6wa1 A:3-14,19-28,44-53,60-64,128-132
1qv6 d1qv6a1 A:5-16,21-30,46-55,61-65,129-133
1lde d1ldea1 A:5-16,21-30,46-55,61-65,129-133
1p0f d1p0fa1 A:1005-1016,1021-1030,1046-1055,1061-1065,1129-1133
1lde d1lded1 D:5-16,21-30,46-55,61-65,129-133
2fze d2fzeb1 B:3-14,19-28,44-53,60-64,128-132
1m6h d1m6ha1 A:3-14,19-28,44-53,60-64,128-132
2fzw d2fzwb1 B:3-14,19-28,44-53,60-64,128-132
1p0c d1p0ca1 A:1005-1016,1021-1030,1046-1055,1061-1065,1129-1133
1htb d1htba1 A:5-16,21-30,46-55,61-65,129-133
1e3i d1e3ia1 A:5-16,21-30,46-54,61-65,133-137
1bto d1btod1 D:5-16,21-30,46-55,61-65,129-133
1p0c d1p0cb1 B:2005-2016,2021-2030,2046-2055,2061-2065,2129-2133
1m6w d1m6wb1 B:3-14,19-28,44-53,60-64,128-132
1bto d1btoc1 C:5-16,21-30,46-55,61-65,129-133
1bto d1btoa1 A:5-16,21-30,46-55,61-65,129-133
1mp0 d1mp0b1 B:3-14,19-28,44-53,60-64,128-132
1mgo d1mgob1 B:5-16,21-30,46-55,61-65,129-133
1mgo d1mgoa1 A:5-16,21-30,46-55,61-65,129-133
1bto d1btob1 B:5-16,21-30,46-55,61-65,129-133
1cdo d1cdob1 B:5-16,21-30,46-56,62-66,130-134
1n8k d1n8kb1 B:5-16,21-30,46-55,61-65,129-133
2fze d2fzea1 A:3-14,19-28,44-53,60-64,128-132
1ldy d1ldya1 A:5-16,21-30,46-55,61-65,129-133
1ma0 d1ma0b1 B:3-14,19-28,44-53,60-64,128-132
1adb d1adba1 A:5-16,21-30,46-55,61-65,129-133
1mc5 d1mc5a1 A:3-14,19-28,44-53,60-64,128-132
1ee2 d1ee2a1 A:5-16,21-30,46-55,61-65,128-132
1d1t d1d1td1 D:5-16,21-30,46-55,61-65,129-133
1d1t d1d1tc1 C:5-16,21-30,46-55,61-65,129-133
1p0f d1p0fb1 B:2005-2016,2021-2030,2046-2055,2061-2065,2129-2133
1ma0 d1ma0a1 A:3-14,19-28,44-53,60-64,128-132
1e3e d1e3ea1 A:5-16,21-30,46-55,61-65,133-137
1agn d1agna1 A:5-16,21-30,46-55,61-65,129-133
1mc5 d1mc5b1 B:3-14,19-28,44-53,60-64,128-132
1agn d1agnb1 B:5-16,21-30,46-55,61-65,129-133
1adc d1adcb1 B:5-16,21-30,46-55,61-65,129-133
1d1s d1d1sc1 C:5-16,21-30,46-55,61-65,129-133
1agn d1agnd1 D:5-16,21-30,46-55,61-65,129-133
1d1t d1d1ta1 A:5-16,21-30,46-55,61-65,129-133
1d1t d1d1tb1 B:5-16,21-30,46-55,61-65,129-133
1adc d1adca1 A:5-16,21-30,46-55,61-65,129-133
1d1s d1d1sb1 B:5-16,21-30,46-55,61-65,129-133
1d1s d1d1sa1 A:5-16,21-30,46-55,61-65,129-133
1agn d1agnc1 C:5-16,21-30,46-55,61-65,129-133
1d1s d1d1sd1 D:5-16,21-30,46-55,61-65,129-133
3. d.110.3 PYP-like sensor domain (PAS domain) alpha-beta(2)-alpha(2)-beta(3) !
Profilin-like core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha
3c2w d3c2wc3 C:27-34,36-43,65-78,104-113,218-223
3c2w d3c2wg3 G:27-34,36-43,65-79,104-113,218-223
3c2w d3c2wf3 F:27-34,36-43,65-79,104-113,218-223
2ool d2oola2 A:43-51,52-60,83-96,127-135,240-245
1ztu d1ztua2 A:39-47,48-56,65-72,120-129,231-236
List of motif hits that are not present in SCOP but are found in PDB for pattern ID: 607 (enumeration index: query1660.1661) of S5
2coi A:92-104,106-112,133-149,158-170,381-385
2coi B:92-104,106-112,133-149,158-170,381-385
2bcf A:43-51,52-60,176-191,249-260,287-291
3dtf B:74-86,88-94,115-131,140-152,363-368
3dtf A:74-86,88-94,115-131,141-153,363-368
2abj D:90-102,104-110,131-147,156-168,379-383
2abj G:90-102,104-110,131-147,156-168,379-383
2abj J:90-102,104-110,131-147,155-168,379-383
2abj A:90-102,104-110,131-147,155-168,379-383
3tii A:198-209,211-217,278-299,309-323,373-377
3tii B:198-209,211-217,278-299,309-323,373-377
1wrv B:33-43,47-52,74-90,92-102,301-306
1wrv A:33-45,46-52,74-90,93-102,301-306
1wrv C:33-43,47-52,74-90,92-102,301-306
3qj5 A:3-14,19-28,44-53,60-64,128-132
3qj5 B:3-14,19-28,44-53,60-64,128-132
3fgw A:248-257,260-272,418-426,426-431,532-542
2hgx B:572-584,586-592,613-629,637-650,861-865
2hgx A:72-84,86-92,113-129,138-150,361-365
2hg8 B:572-584,586-592,613-629,637-650,861-865
2hg8 A:72-84,86-92,113-129,138-150,361-365
3fgr B:249-257,260-272,418-426,426-432,532-542
2hgw B:572-584,586-592,613-629,637-650,861-865
2hgw A:72-84,86-92,113-129,138-150,361-365
3ht5 A:74-86,88-94,115-131,141-152,363-368
2cog B:92-104,106-112,133-149,158-170,381-385
3fbx A:249-257,260-272,418-426,426-432,532-542
3cos A:6-17,22-31,47-55,63-67,135-139
3cos D:6-17,22-31,47-55,63-67,135-139
3cos B:6-17,22-31,47-55,63-67,135-139
3cos C:6-17,22-31,47-55,63-67,135-139
2ej0 C:33-43,47-52,74-90,92-102,301-306
2ej0 A:33-44,47-52,74-90,93-102,301-306
2ej0 E:33-44,47-52,74-90,93-102,301-306
2ej0 F:33-44,47-52,74-90,93-102,301-306
2ej0 B:33-44,47-52,74-90,93-102,301-306
2ej0 D:33-43,48-52,74-90,92-102,301-305
3nhq F:27-34,36-43,65-79,104-113,218-223
3nhq B:27-34,36-43,65-79,104-113,218-223
3nhq E:27-34,36-43,65-78,104-113,218-223
3nhq A:26-34,36-43,65-78,104-113,218-223
3nhq C:27-34,36-43,65-78,104-113,218-223
3nhq D:27-34,36-43,65-79,104-113,218-223
3nhq H:27-34,36-43,65-78,104-113,218-223
3nhq G:27-34,36-43,65-78,104-113,218-223
2hdk B:572-584,586-592,613-629,638-650,861-865
2hdk A:72-84,86-92,113-129,137-150,361-365
2ej2 A:33-44,47-52,74-90,93-102,301-306
2ej2 E:33-43,47-52,74-90,92-102,301-306
2ej2 B:33-43,47-52,74-90,92-102,301-306
2ej2 F:33-44,47-52,74-90,93-102,301-306
2ej2 C:33-44,47-52,74-90,93-102,301-305
2ej2 D:33-43,47-52,74-90,92-102,301-306
3ibr B:27-34,36-43,65-78,104-113,218-223
3ibr A:26-34,36-43,65-79,104-113,218-223
3u0g B:36-47,49-55,77-93,96-107,303-307
3u0g A:36-47,49-55,77-93,96-107,303-307
3u0g D:36-47,49-55,77-93,96-107,303-307
3u0g C:36-47,49-55,77-93,96-107,303-307
3g6o B:27-34,36-43,65-78,104-113,218-223
3pxp C:110-116,118-125,134-145,250-261,279-283
3pxp A:110-116,118-125,134-145,250-261,279-283
3jz6 A:74-86,88-94,115-131,141-152,363-368
3jz6 B:74-86,88-94,115-131,140-152,363-368
3dtg A:74-86,88-94,115-131,141-153,363-368
3dtg B:74-86,88-94,115-131,140-152,363-368
3tin A:195-209,211-217,278-303,309-323,373-377
2eiy C:33-44,47-52,74-90,93-102,301-306
2eiy B:33-43,47-52,74-90,92-102,301-306
2eiy A:33-43,47-52,74-90,92-102,301-306
2coj B:92-104,106-112,133-149,158-170,381-385
2coj A:92-104,106-112,133-149,158-170,381-385
3fgt B:249-257,260-272,417-426,426-432,534-542
2ej3 C:33-43,47-52,74-90,92-102,301-306
2ej3 B:33-43,47-52,74-90,92-102,301-306
2ej3 A:33-43,47-52,74-90,92-102,301-306