1. b.82.1 RmlC-like cupins
Double-stranded beta-helix one turn of helix is made by two pairs of antiparallel strands linked with short turns ! has appearance of a sandwich of distinct architecture and jelly-roll topology
1sfn d1sfna_ A:1009-1013,1014-1020,1034-1042,1203-1209,1210-1219
1sfn d1sfnb_ B:2009-2013,2014-2020,2034-2042,2203-2209,2210-2219
1dzr d1dzra_ A:1-7,12-18,24-32,98-106,110-116
1dzt d1dzta_ A:1-7,12-18,24-32,98-106,110-116
1nzc d1nzcb_ B:7-15,20-28,33-41,106-114,116-123
1nxm d1nxma_ A:7-15,20-28,33-41,106-114,116-123
2ixl d2ixlc1 C:7-15,20-28,33-41,106-114,116-123
1nzc d1nzcc_ C:7-15,20-28,33-41,105-114,116-123
1nyw d1nywb_ B:7-15,20-28,33-41,105-114,116-124
1nyw d1nywa_ A:7-15,20-28,33-41,105-114,116-124
2ixc d2ixcd1 D:1-6,10-16,23-31,97-105,109-116
1pm7 d1pm7b_ B:1-6,10-16,23-31,97-105,109-115
1pm7 d1pm7a_ A:1-6,10-16,23-31,96-105,109-116
2ixc d2ixca1 A:1-6,10-16,23-31,96-105,109-116
2ixc d2ixcb1 B:1-6,10-16,23-31,96-105,109-115
1nxm d1nxmb_ B:9-15,20-27,33-41,106-114,116-123
1nzc d1nzcd_ D:9-15,20-27,33-41,105-114,116-124
1nzc d1nzca_ A:9-15,20-27,33-41,105-114,116-124
2ixl d2ixlb1 B:9-15,20-27,33-41,106-114,116-124
2ixl d2ixld1 D:9-15,20-27,33-41,106-114,116-124
2ixl d2ixla1 A:9-15,20-27,33-41,105-114,116-124
2. b.110.1 Cloacin translocation domain
Cloacin translocation domain complex fold made of several coiled beta-sheets
1jch d1jcha2 A:96-101,147-156,176-185,225-232,282-290
1jch d1jchc2 C:96-101,147-156,176-185,225-232,282-290
2b5u d2b5ua2 A:93-97,153-161,183-191,229-236,282-290
1rh1 d1rh1a1 A:69-74,138-147,169-177,224-229,279-287
2b5u d2b5uc2 C:93-97,153-161,183-191,229-236,282-290
3. b.19.1 Viral protein domain forms homotrimers !
Viral protein domain sandwich; 9 strands in 2 sheets; jelly-roll; form trimers
1ahs d1ahsc_ C:147-154,156-164,166-170,193-197,238-251
1ahs d1ahsa_ A:147-154,156-165,166-170,193-197,238-251
1bvp d1bvp12 1:148-155,157-165,167-171,193-197,238-253
1bvp d1bvp42 4:148-155,157-165,167-171,193-197,238-253
1bvp d1bvp22 2:148-155,157-165,167-171,193-197,238-253
1bvp d1bvp52 5:148-155,157-165,167-171,193-197,238-253
2btv d2btvq2 Q:148-155,157-165,167-171,193-197,238-253
2btv d2btvi2 I:148-155,157-165,167-171,193-197,238-253
2btv d2btvr2 R:148-155,157-165,167-171,193-197,238-253
2btv d2btvg2 G:148-155,157-165,167-171,193-197,238-253
2btv d2btvs2 S:148-155,157-165,167-171,193-197,238-253
1ahs d1ahsb_ B:147-154,156-165,166-170,192-196,238-251
2btv d2btve2 E:148-155,157-165,167-171,193-197,238-253
2btv d2btvd2 D:148-155,157-165,167-171,193-197,238-253
2btv d2btvp2 P:148-155,157-165,167-171,193-197,238-253
2btv d2btvt2 T:148-155,157-165,167-171,192-197,238-253
1bvp d1bvp32 3:148-155,157-165,167-171,192-196,238-253
1bvp d1bvp62 6:148-155,157-165,167-171,192-196,238-253
2btv d2btvh2 H:148-155,157-165,167-171,192-196,238-253
2btv d2btvj2 J:148-155,157-165,167-171,192-196,238-253
2btv d2btvc2 C:148-155,157-165,167-171,192-196,238-253
2btv d2btvf2 F:148-155,157-165,167-171,192-196,238-253
2btv d2btvq2 Q:148-155,157-165,167-171,199-204,238-253
2btv d2btvs2 S:148-155,157-165,167-171,199-204,238-253
4. f.6.1 Leukocidin-like
Leukocidin-like subunit fold contains beta-sandwich of Ig-like (grerk-key) topology and a beta-ribbon arm that forms an oligomeric transmembrane barrel
3lkf d3lkfa_ A:30-44,48-61,72-91,137-146,219-232
2lkf d2lkfa_ A:30-44,48-61,72-90,136-146,219-232
1lkf d1lkfa_ A:30-44,48-61,72-90,137-146,219-232
3lkf d3lkfa_ A:30-44,48-61,72-91,120-127,219-232
1t5r d1t5rd_ D:25-38,43-56,68-85,130-139,204-217
1pvl d1pvla_ A:30-44,47-61,72-90,138-146,219-233
1pvl d1pvla_ A:30-44,47-61,72-90,120-127,219-233
List of motif hits that are not present in SCOP but are found in PDB for pattern ID: 216 (enumeration index: query1756.2307.2443) of S5
2axc A:88-92,148-156,178-186,223-231,277-284
1xez A:178-197,205-212,238-262,310-325,384-393
3opu F:1330-1338,1356-1371,1378-1385,1401-1407,1448-1462
3opu E:1330-1338,1356-1367,1378-1385,1401-1407,1448-1462
3opu D:1330-1338,1356-1371,1378-1385,1401-1407,1448-1462
3opu B:1330-1338,1356-1371,1378-1385,1401-1407,1447-1462
3opu C:1330-1338,1356-1371,1378-1385,1401-1407,1448-1462
2ixk B:3-9,14-20,26-34,99-107,111-117
2ixk A:3-9,14-20,26-34,99-107,111-117
3i1l B:159-163,177-184,189-195,205-217,271-277
3i1l C:159-163,177-184,189-195,205-217,271-277
3dhu A:364-373,374-382,386-392,396-403,420-427
3dhu C:364-373,374-382,386-392,396-403,420-427
3dhu B:364-373,374-382,386-392,396-403,420-427
2qk7 B:30-44,47-61,72-88,137-146,219-233
2qk7 A:25-38,43-56,69-84,130-139,203-216
2b9u H:2-9,11-18,24-32,96-104,107-113
2b9u C:2-9,11-18,24-32,96-104,107-113
2b9u E:2-9,11-18,24-32,96-104,108-113
2ixi B:0-6,11-17,23-31,96-104,108-114
2ixi A:0-6,11-17,23-31,96-104,108-114
3i1k C:159-163,177-184,189-195,205-217,271-277
2wza A:1255-1263,1280-1295,1302-1309,1325-1331,1372-1386
3roh A:53-67,71-84,98-114,160-169,235-248
2wqs A:1255-1263,1280-1291,1302-1309,1325-1331,1372-1386
2woy A:1255-1263,1280-1291,1302-1309,1325-1331,1372-1386
3s8r B:168-178,183-193,344-353,605-614,625-633
3qe5 A:1334-1342,1360-1371,1382-1390,1405-1411,1452-1466