1. a.56.1 CO dehydrogenase ISP C-domain like contains 2Fe-2S cluster !
CO dehydrogenase ISP C-domain like core: 4 helices, bundle
1jro d1jroe1 E:47-54,55-62,103-121,124-133,138-152
1jro d1jrog1 G:47-54,55-62,103-121,124-133,138-152
1rm6 d1rm6f1 F:49-54,55-60,103-119,122-134,139-157
1rm6 d1rm6c1 C:49-54,55-60,103-119,122-134,139-157
1sb3 d1sb3c1 C:49-54,55-60,101-119,122-134,139-155
1fiq d1fiqa1 A:51-59,64-72,114-132,135-144,152-164
1jrp d1jrpe1 E:47-54,55-62,103-121,124-133,138-153
1jrp d1jrpc1 C:47-54,55-62,103-121,124-133,138-153
1jro d1jroc1 C:47-54,55-62,103-121,124-133,138-153
1jrp d1jrpg1 G:47-54,55-62,103-121,124-133,138-153
1jrp d1jrpa1 A:47-54,55-62,103-121,124-133,138-153
1jro d1jroa1 A:47-54,55-62,103-121,124-133,138-153
1sb3 d1sb3f1 F:49-54,55-60,101-119,122-134,139-157
3b9j d3b9ja1 A:51-61,62-72,114-132,135-146,152-164
1t3q d1t3qd1 D:56-61,62-67,108-126,129-141,146-156
1v97 d1v97a1 A:51-60,63-72,114-132,135-146,152-165
1v97 d1v97b1 B:51-61,62-72,114-132,135-146,152-165
1t3q d1t3qa1 A:56-61,62-67,108-126,129-141,146-156
1n5x d1n5xa1 A:51-61,62-72,114-132,135-147,152-165
1n5x d1n5xb1 B:51-61,62-72,114-132,135-147,152-165
1fo4 d1fo4b1 B:51-60,63-72,114-132,135-144,152-165
1vdv d1vdva1 A:51-61,62-72,114-132,135-144,152-164
3b9j d3b9ji1 I:51-60,63-72,114-132,135-147,152-164
1vdv d1vdvb1 B:51-61,62-72,114-132,135-144,152-165
1fo4 d1fo4a1 A:51-60,63-72,114-132,135-144,152-165
1ffu d1ffua1 A:50-55,56-61,102-120,123-135,140-157
1ffv d1ffvd1 D:50-55,56-61,102-120,123-135,140-157
1ffu d1ffud1 D:50-55,56-61,102-120,123-135,140-157
1vlb d1vlba1 A:48-53,54-59,101-119,122-134,141-158
1sij d1sija1 A:48-53,54-59,101-119,122-134,141-158
1ffv d1ffva1 A:50-55,56-61,102-114,123-135,140-157
1dgj d1dgja1 A:48-53,54-59,101-119,122-134,141-158
2. e.22.1 Dehydroquinate synthase-like
Dehydroquinate synthase-like 2 domains: (1) alpha/beta of a Rossmann-fold topology, binds NAD (2) multihelical array
1rrm d1rrmb_ B:150-158,159-167,259-274,346-360,371-385
1rrm d1rrma_ A:150-158,159-167,259-274,346-360,371-385
1vlj d1vlja_ A:149-157,158-166,265-279,349-368,382-395
1oj7 d1oj7d_ D:148-156,157-165,264-278,350-364,375-387
1vlj d1vljb_ B:149-157,158-166,265-279,349-368,382-395
2bi4 d2bi4a1 A:150-158,159-167,260-274,346-360,371-383
2bl4 d2bl4a1 A:150-158,159-167,260-274,346-360,371-383
1oj7 d1oj7b_ B:148-156,157-165,264-278,350-364,375-387
3. d.58.39 Glutamyl tRNA-reductase catalytic, N-terminal domain common fold is elaborated with additional secondary structures !
Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
1gpj d1gpja3 A:3-11,49-57,77-91,99-117,120-142
4. a.102.1 Six-hairpin glycosidases
alpha/alpha toroid multihelical; up to seven alpha-hairpins are arranged in closed circular array; there may be sequence similarities between different superfamilies
2nvp d2nvpa1 A:43-48,49-55,62-77,80-102,133-152
2p0v d2p0vb1 B:87-91,95-100,107-122,125-147,178-197
2p0v d2p0va1 A:87-91,95-100,107-122,125-147,178-197
5. d.113.1 Nudix
Nudix beta(2)-alpha-beta(3)-alpha; 3 layers: alpha/beta/alpha; mixed sheet ! contains beta-grasp motif
2a8t d2a8tb1 B:55-64,66-70,166-176,180-193,196-208
2a8t d2a8ta1 A:55-64,66-70,166-176,180-193,196-209
1u20 d1u20a1 A:55-64,66-70,166-176,180-193,196-209
1u20 d1u20b1 B:55-64,66-70,166-176,180-193,196-209
List of motif hits that are not present in SCOP but are found in PDB for pattern ID: 676 (enumeration index: query1866) of S5
3eub J:51-60,63-72,114-132,135-144,152-164
3eub 2:51-59,64-72,114-132,135-147,152-164
3eub S:51-60,63-72,114-132,135-147,152-163
3eub A:51-60,63-72,114-132,135-144,152-164
2e1q B:51-60,63-72,114-132,135-146,152-165
2e1q A:51-60,63-72,114-132,135-147,152-165
2e1q C:51-61,62-72,114-132,135-146,152-164
2e1q D:51-61,62-72,114-132,135-146,152-164
2wzs H:501-505,506-510,546-555,556-570,601-615
2wzs B:501-505,506-510,546-555,556-570,601-615
2wzs D:501-505,506-510,546-555,556-570,601-615
2wzs E:501-505,506-510,546-555,556-570,601-615
3amz A:51-61,62-72,114-132,135-144,152-165
3amz B:51-61,62-72,114-132,135-146,152-165
3d3o A:19-29,30-41,59-69,70-89,93-108
3d3o B:19-29,30-41,59-70,70-86,93-108
1wyg A:51-60,63-72,113-131,134-146,151-163
2fav B:79-88,91-98,106-121,127-134,136-148
2v8j A:411-415,419-424,431-446,447-466,484-499
2w3r E:47-54,55-62,104-121,124-133,138-153
2w3r A:47-54,55-62,103-121,124-133,138-153
2w3r C:47-54,55-62,104-121,124-133,138-153
2w3r G:47-54,55-62,103-121,124-133,138-153
2v8i A:411-415,419-423,431-446,447-466,484-499
3nvy J:51-61,62-72,114-132,135-147,152-164
3nvy A:51-61,62-72,114-132,135-147,152-164
3nvz A:51-60,63-72,114-132,135-147,152-164
3nvz J:51-61,62-72,114-132,135-147,152-164
3an1 B:51-61,62-72,112-131,134-146,151-163
3an1 A:51-61,62-72,112-131,134-146,151-163
3nrz A:51-61,62-72,114-132,135-147,152-164
3nrz J:51-60,63-72,114-132,135-147,152-164
3on6 B:87-91,95-100,107-122,125-147,178-197
3on6 A:87-91,95-100,107-122,125-147,178-197
3s4w B:54-58,63-67,86-105,104-114,143-161
2kia A:44-54,57-63,89-101,101-113,118-129
3bdj B:51-61,62-72,114-132,135-144,152-164
3bdj A:51-61,62-72,114-132,135-144,152-164
3hrd D:50-55,56-61,102-120,123-135,140-159
3hrd H:50-55,56-61,102-120,123-135,140-157
2wvy A:505-509,510-514,550-559,560-573,605-619
2wvy C:505-509,510-514,550-559,560-573,605-619
2wvy B:505-509,510-514,550-559,560-573,605-619
3bfj R:152-160,161-169,263-278,353-364,375-387
3bfj E:152-160,161-169,264-278,353-365,375-387
3bfj N:152-160,161-169,263-278,353-364,375-387
3bfj I:152-160,161-169,263-278,353-364,375-387
3bfj S:152-160,161-169,263-278,353-364,375-387
3bfj P:152-160,161-169,264-278,353-364,375-387
3bfj A:152-160,161-169,264-278,350-364,375-387
3bfj B:152-160,161-169,264-278,350-364,375-387
2w55 A:47-54,55-62,103-121,124-133,138-153
2w55 G:47-54,55-62,103-121,124-133,138-153
2w55 C:47-54,55-62,103-121,124-133,138-153
2w55 E:47-54,55-62,103-121,124-133,138-153
3sr6 A:51-60,63-72,114-132,135-147,152-164
3sr6 J:51-59,64-72,114-132,135-147,152-164
3fah A:48-53,54-59,101-119,122-134,141-158
3ns1 J:51-61,62-72,114-132,135-147,152-164
3ns1 A:51-60,63-72,114-132,135-147,152-164
3dra A:247-251,252-256,257-272,273-290,292-304
3ox4 D:148-154,159-165,259-274,346-360,371-383
3ox4 B:148-156,157-165,260-274,349-360,371-383
3ox4 A:148-156,157-165,260-274,346-360,371-383
3ox4 C:148-156,157-165,260-274,349-361,371-383
3qt3 A:43-48,49-55,62-77,80-102,133-152
2w54 C:47-54,55-62,103-121,124-133,138-153
2w54 A:47-54,55-62,103-121,124-133,138-153
2w54 E:47-54,55-62,103-121,124-133,138-153
2w54 G:47-54,55-62,104-121,124-133,138-153
3etr L:51-60,63-72,114-132,135-147,152-165
3etr A:51-60,63-72,114-132,135-146,152-164
2ww1 D:501-505,506-510,546-555,556-570,601-615
2w3s C:47-54,55-62,104-121,124-133,138-153
2w3s A:47-54,55-62,104-121,124-133,138-153
2w3s G:47-54,55-62,103-121,124-133,138-153
2w3s E:47-54,55-62,104-121,124-133,138-153
3qt9 A:43-48,49-55,62-77,80-102,133-152
3gqe A:53-61,62-70,77-100,108-115,120-136
3etu A:131-136,137-142,206-217,245-264,276-292
3etu A:131-136,137-142,206-217,245-264,265-277
3nvw A:51-61,62-72,114-132,135-144,152-164
3nvw J:51-61,62-72,114-132,135-144,152-165
2l8r A:67-74,75-86,92-111,119-126,128-143
3nvv J:51-61,62-72,114-132,135-147,152-164
3nvv A:51-60,63-72,114-132,135-147,152-164
2v8k A:411-415,419-424,431-446,447-466,484-499
3gqo B:53-61,62-70,77-100,108-115,120-136
3etv A:143-148,149-154,218-229,257-276,288-304
3etv A:143-148,149-154,218-229,257-276,277-289
3am9 B:51-61,62-72,113-132,135-147,152-164
3am9 A:51-60,63-72,114-132,135-144,152-164
2ckj C:51-61,62-72,114-132,135-147,152-164
2ckj A:51-61,62-72,114-132,135-147,152-164
2ckj D:51-61,62-72,114-132,135-147,152-164
2ckj B:51-61,62-72,114-132,135-147,152-164
3l4p A:48-53,54-59,101-119,122-134,141-158
3owo B:148-156,157-165,260-274,346-360,371-383
3owo C:148-156,157-165,260-274,349-361,371-383
3owo D:148-156,157-165,260-274,349-360,371-383
2e3t A:51-61,62-72,113-131,134-145,151-164
2e3t B:51-61,62-72,113-131,134-145,151-163
3fc4 A:48-53,54-59,101-119,122-134,141-158