1. d.152.1 Aldehyde ferredoxin oxidoreductase, N-terminal domain
Aldehyde ferredoxin oxidoreductase, N-terminal domain contains sandwich; duplication of alpha+beta motif with single mixed sheet ! motif: beta(2)-alpha-beta(3)-alpha-beta; strand order 216345, strands 1 and 6 are parallel
1aor d1aorb2 B:6-14,58-63,76-84,87-95,107-115
1aor d1aora2 A:6-14,58-63,76-84,87-95,107-115
1b4n d1b4na2 A:6-14,57-62,74-82,87-95,107-114
1b4n d1b4nd2 D:6-14,57-62,74-81,86-95,107-114
1b25 d1b25a2 A:6-14,57-62,74-82,87-95,107-114
1b25 d1b25d2 D:6-14,57-62,74-83,86-95,107-114
1b4n d1b4nc2 C:6-14,57-62,74-82,87-95,107-114
1b25 d1b25b2 B:6-14,57-62,74-83,86-95,107-114
1b25 d1b25c2 C:6-14,57-62,74-83,86-95,107-114
1b4n d1b4nb2 B:6-14,57-62,74-82,86-95,107-114
1aor d1aora2 A:119-126,158-163,175-179,181-185,197-205
1aor d1aorb2 B:119-126,158-163,175-179,181-185,197-205
1b25 d1b25d2 D:118-125,156-161,173-177,179-183,195-203
1b4n d1b4nd2 D:118-125,156-161,173-177,179-183,195-203
1b4n d1b4nb2 B:118-125,156-161,173-177,179-183,195-203
1b25 d1b25b2 B:118-125,156-161,173-177,179-183,195-203
1b4n d1b4na2 A:118-125,156-161,173-177,179-183,195-203
1b25 d1b25c2 C:118-125,156-161,173-177,179-183,195-203
1b25 d1b25a2 A:118-125,156-161,173-177,179-183,195-203
1b4n d1b4nc2 C:118-125,156-161,173-177,179-183,195-203
2. d.177.1 FAH
FAH unusual fold; contains 3 layers of beta-sheet structure
1saw d1sawa_ A:18-24,68-80,94-105,126-137,184-192
1sv6 d1sv6c_ C:55-63,101-114,130-142,160-167,224-231
1saw d1sawb_ B:17-24,68-80,94-105,128-136,184-192
1sv6 d1sv6d_ D:55-63,101-114,130-142,160-167,224-231
1sv6 d1sv6b_ B:55-63,101-114,130-142,160-167,224-231
1sv6 d1sv6a_ A:55-63,101-114,130-142,160-167,224-231
1sv6 d1sv6e_ E:55-63,101-114,130-142,160-167,224-231
1qco d1qcoa2 A:121-128,196-206,225-236,256-260,343-350
1qco d1qcob2 B:621-628,696-706,725-736,756-760,843-850
1nkq d1nkqd_ D:311-316,384-396,413-424,447-455,508-516
1i7o d1i7oc1 C:3-9,60-72,86-97,113-123,168-174
1gtt d1gttc1 C:3-9,60-72,86-97,113-123,168-174
1gtt d1gttb1 B:3-9,60-72,86-97,113-123,168-174
1i7o d1i7ob1 B:3-9,60-72,86-97,113-123,168-174
1i7o d1i7od1 D:3-9,60-72,86-97,113-123,168-174
1nkq d1nkqf_ F:311-316,384-396,413-424,447-455,508-516
1gtt d1gtta1 A:3-9,60-72,86-97,113-123,168-174
1gtt d1gttd1 D:3-9,60-72,86-97,113-123,168-174
1nkq d1nkqb_ B:311-316,384-395,413-424,447-456,508-516
1nr9 d1nr9c_ C:16-23,67-79,93-104,125-136,184-192
1i7o d1i7oa1 A:3-9,60-72,86-97,113-123,168-174
1nkq d1nkqa_ A:11-16,84-95,113-124,147-156,208-216
1qcn d1qcna2 A:121-128,196-208,225-236,256-260,343-350
1qqj d1qqjb2 B:121-128,196-208,225-236,256-260,343-350
1qcn d1qcnb2 B:621-628,696-708,725-736,756-760,843-850
1nkq d1nkqe_ E:11-16,84-95,113-124,147-156,208-216
1hyo d1hyob2 B:621-629,696-708,725-736,756-760,843-850
1nkq d1nkqc_ C:11-16,84-95,113-124,147-156,208-216
1qqj d1qqja2 A:121-128,196-208,225-236,256-260,343-350
2hzy d2hzyb2 B:121-128,196-208,225-236,256-260,343-350
2hzy d2hzya2 A:121-128,196-208,225-236,256-260,343-350
1hyo d1hyoa2 A:121-128,196-208,225-236,256-260,343-350
1gtt d1gttd2 D:223-229,272-284,298-311,330-334,388-395
1gtt d1gtta2 A:223-229,272-285,298-311,328-334,387-395
1i7o d1i7od2 D:223-229,272-284,298-311,330-334,388-395
1i7o d1i7oc2 C:223-229,272-284,298-311,330-334,388-395
1nr9 d1nr9b_ B:16-23,67-79,93-104,127-136,184-192
1i7o d1i7oa2 A:223-229,272-285,298-311,330-334,387-395
1gtt d1gttc2 C:223-229,272-284,298-311,330-334,388-395
1i7o d1i7ob2 B:223-229,272-285,298-311,330-334,387-395
1nr9 d1nr9a_ A:16-23,67-79,93-104,127-136,184-192
1gtt d1gttb2 B:223-229,272-285,298-311,330-334,387-395
1nr9 d1nr9d_ D:16-23,67-79,93-104,127-131,184-192
1nr9 d1nr9d_ D:16-23,67-79,93-104,132-136,184-192
3. d.3.1 Cysteine proteinases the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet !
Cysteine proteinases consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn
2iho d2ihoa2 A:175-179,243-250,255-264,269-276,287-293
4. b.29.1 Concanavalin A-like lectins/glucanases
Concanavalin A-like lectins/glucanases sandwich; 12-14 strands in 2 sheets; complex topology
1eg1 d1eg1a_ A:11-20,125-134,248-258,265-276,355-366
1eg1 d1eg1c_ C:11-20,125-134,248-258,265-276,355-366
1ojj d1ojjb_ B:10-19,126-135,265-276,278-290,381-393
2a39 d2a39b_ B:10-19,126-135,265-276,278-290,381-393
1ojk d1ojkb_ B:10-19,126-135,265-276,278-290,381-393
1ojj d1ojja_ A:10-19,126-135,265-276,278-290,381-393
1dym d1dyma_ A:10-19,126-135,265-276,278-290,381-393
1ojk d1ojka_ A:10-19,126-135,265-276,278-290,381-393
2a39 d2a39a_ A:10-19,126-135,265-276,278-290,381-393
1a39 d1a39a_ A:10-19,126-135,265-276,278-290,381-393
1oji d1ojia_ A:10-19,126-135,265-276,278-290,381-393
2ovw d2ovwb_ B:10-19,124-133,265-276,278-290,381-393
2ovw d2ovwa_ A:10-19,124-133,265-276,278-290,381-393
1ovw d1ovwb_ B:10-19,124-133,265-276,278-290,381-393
2ovw d2ovwd_ D:10-19,124-133,265-276,278-290,381-393
2ovw d2ovwc_ C:10-19,124-133,265-276,278-290,381-393
1ovw d1ovwc_ C:10-19,124-133,265-276,278-290,381-393
4cel d4cela_ A:11-21,124-133,287-296,298-307,414-425
4cel d4celb_ B:11-21,124-133,287-296,298-307,414-425
1q9h d1q9ha_ A:11-20,121-130,282-293,298-310,416-429
5cel d5cela_ A:11-21,124-133,287-296,298-307,412-425
1egn d1egna_ A:11-21,124-133,287-296,298-307,412-425
6cel d6cela_ A:11-21,124-133,287-296,298-307,412-425
7cel d7cela_ A:11-21,124-133,287-296,298-307,412-425
1ovw d1ovwd_ D:10-20,124-133,265-276,278-290,381-393
1dy4 d1dy4a_ A:11-21,124-133,287-296,298-307,412-425
1ovw d1ovwa_ A:10-20,124-133,265-276,278-290,381-393
3cel d3cela_ A:11-21,124-133,287-296,298-307,412-425
1h46 d1h46x_ X:11-21,121-130,274-285,290-302,409-422
3ovw d3ovwa_ A:10-20,124-133,265-276,278-290,381-393
4ovw d4ovwa_ A:10-20,124-133,265-276,278-290,381-393
1gpi d1gpia_ A:11-21,121-130,274-285,290-302,409-422
3ovw d3ovwb_ B:10-20,124-133,265-276,278-290,381-393
1z3w d1z3wa1 A:11-21,121-130,274-285,290-302,409-422
4ovw d4ovwb_ B:10-20,124-133,265-276,278-290,381-393
1z3v d1z3va1 A:11-21,121-130,274-285,290-302,409-422
1z3t d1z3ta1 A:11-21,121-130,274-285,290-302,409-422
2v3r d2v3ra1 A:11-21,124-133,287-296,298-307,412-426
2v3i d2v3ia1 A:11-21,124-133,287-296,298-307,412-426
2cel d2cela_ A:11-21,124-133,287-296,298-307,412-426
2cel d2celb_ B:11-21,124-133,287-296,298-307,412-426
1cel d1celb_ B:11-21,124-133,287-296,298-307,412-426
1cel d1cela_ A:11-21,124-133,287-296,298-307,412-426
1q2b d1q2ba_ A:11-21,124-133,287-296,298-307,412-426
1q2e d1q2eb_ B:11-21,124-133,287-296,298-307,412-426
1q2e d1q2ea_ A:11-21,124-133,287-296,298-307,412-426
5. b.62.1 Cyclophilin-like
Cyclophilin-like barrel, closed; n=8, S=10; complex topology
2phc d2phcb1 B:85-93,122-130,132-139,166-173,202-211
6. i.1.1 Ribosome and ribosomal fragments
Ribosome and ribosomal fragments
3ccj d3ccjt1 T:24-28,45-51,58-68,69-76,95-102
3cma d3cmat1 T:24-28,45-52,60-68,69-75,95-102
3ccs d3ccst1 T:24-28,45-52,60-68,69-75,95-102
3cc4 d3cc4t1 T:24-28,45-51,58-68,69-75,95-102
3cd6 d3cd6t1 T:24-28,45-52,60-68,69-75,95-102
3cpw d3cpws1 S:24-28,45-51,58-68,69-75,95-102
3ccu d3ccut1 T:24-28,45-51,58-68,69-75,95-102
3cc7 d3cc7t1 T:23-28,45-52,60-68,69-75,95-102
3cc2 d3cc2t1 T:24-28,45-51,58-68,69-75,95-102
3ccm d3ccmt1 T:24-28,45-52,60-68,69-75,95-102
2qex d2qext1 T:24-28,45-51,58-68,69-75,95-102
3ccq d3ccqt1 T:24-28,45-51,60-68,69-75,95-102
3ccv d3ccvt1 T:24-28,45-51,60-68,69-75,95-102
1s1i d1s1iu_ U:32-36,53-60,68-76,77-83,103-110
7. b.34.5 Translation proteins SH3-like domain many known members contain KOW motif !
SH3-like barrel barrel, partly opened; n*=4, S*=8; meander ! the last strand is interrupted by a turn of 3-10 helix
1ffk d1ffkq_ Q:24-28,45-52,60-68,69-75,95-102
1vq8 d1vq8t1 T:24-28,45-52,60-68,69-75,95-102
1q82 d1q82u_ U:24-28,45-52,60-68,69-75,95-102
1yjn d1yjnt1 T:24-28,45-52,60-68,69-75,95-102
1n8r d1n8ru_ U:24-28,45-52,60-68,69-75,95-102
1vq9 d1vq9t1 T:24-28,45-52,60-68,69-75,95-102
1vqp d1vqpt1 T:24-28,45-52,60-68,69-75,95-102
1vqm d1vqmt1 T:24-28,45-52,60-68,69-75,95-102
1q86 d1q86u_ U:24-28,45-52,60-68,69-75,95-102
1vqk d1vqkt1 T:24-28,45-52,60-68,69-75,95-102
1vqn d1vqnt1 T:24-28,45-52,60-68,69-75,95-102
1k9m d1k9mu_ U:24-28,45-51,58-68,69-75,95-102
1kd1 d1kd1u_ U:24-28,45-51,58-68,69-75,95-102
1s72 d1s72t_ T:24-28,45-51,58-68,69-75,95-102
1yj9 d1yj9t1 T:24-28,45-52,60-68,69-75,95-102
1yhq d1yhqt1 T:24-28,45-51,58-68,69-75,95-102
1vqo d1vqot1 T:24-28,45-51,58-68,69-75,95-102
1vql d1vqlt1 T:24-28,45-51,58-68,69-75,95-102
1jj2 d1jj2s_ S:24-28,45-51,58-68,69-75,95-102
1vq7 d1vq7t1 T:24-28,45-51,58-68,69-75,95-102
1q81 d1q81u_ U:24-28,45-51,58-68,69-75,95-102
1yit d1yitt1 T:24-28,45-52,60-68,69-75,95-102
1nji d1njiu_ U:24-28,45-51,58-68,69-75,95-102
1vq6 d1vq6t1 T:24-28,45-51,58-68,69-75,95-102
1q7y d1q7yu_ U:24-28,45-51,60-68,69-75,95-102
1m90 d1m90u_ U:24-28,45-51,58-68,69-75,95-102
1kc8 d1kc8u_ U:24-28,45-51,58-68,69-75,95-102
1k73 d1k73u_ U:24-28,45-51,58-68,69-75,95-102
2otj d2otjt1 T:24-28,45-51,58-68,69-75,95-102
1yij d1yijt1 T:24-28,45-51,58-68,69-75,95-102
1k8a d1k8au_ U:24-28,45-51,58-68,69-75,95-102
1qvg d1qvgs_ S:24-28,45-51,58-68,69-75,95-102
1vq5 d1vq5t1 T:24-28,45-51,58-68,69-75,95-102
1kqs d1kqss_ S:24-28,45-51,58-68,69-75,95-102
1qvf d1qvfs_ S:24-28,45-51,58-68,69-75,95-102
1m1k d1m1ku_ U:24-28,45-51,58-68,69-75,95-102
1vq4 d1vq4t1 T:24-28,45-51,58-68,69-75,95-102
1yi2 d1yi2t1 T:24-28,45-51,58-68,69-75,95-102
2otl d2otlt1 T:24-28,45-51,60-68,69-75,95-102
1yjw d1yjwt1 T:24-28,45-51,60-68,69-75,95-102
List of motif hits that are not present in SCOP but are found in PDB for pattern ID: 34 (enumeration index: query187) of S5
2npi B:354-359,382-390,404-417,418-426,434-439
2npi A:354-359,382-390,404-417,418-426,434-439
3i56 T:24-28,45-51,58-68,69-75,95-102
2a2d A:7-11,35-42,65-74,129-137,451-457
3izr Y:31-35,52-58,67-75,76-82,102-109
2xsp A:11-21,126-135,285-296,301-313,421-433
3ore A:389-397,412-419,421-427,452-457,485-493
3g6e T:24-28,45-51,60-68,69-75,95-102
2rg0 D:11-21,124-133,285-294,295-304,410-423
2rg0 B:11-20,124-133,285-294,295-304,412-424
2rg0 A:11-21,124-133,285-294,295-304,410-424
2rg0 C:11-18,124-133,285-294,295-304,410-423
3i55 T:23-28,45-51,60-68,69-75,95-102
3oep A:389-398,412-420,421-427,452-458,484-493
3pfj A:11-20,121-130,282-293,298-310,416-429
3ef2 C:177-181,243-250,255-264,269-276,286-293
3ef2 B:177-181,243-250,255-264,269-276,286-293
3ef2 A:177-181,243-250,255-264,269-276,286-293
3ef2 D:177-181,243-250,255-264,269-276,286-293
2dfu B:49-54,110-123,136-149,165-171,221-228
2dfu D:47-54,110-123,136-149,165-171,221-228
2dfu C:49-54,110-123,136-149,165-171,221-228
2dfu A:49-54,110-123,136-149,165-171,221-229
4a1e S:31-35,52-58,65-75,76-82,102-109
3g4s T:24-28,45-51,60-68,69-75,95-102
3bqb Z:73-80,140-152,158-167,187-191,247-256
3bqb X:74-80,140-152,158-167,187-191,247-256
3bqb Y:74-80,140-152,158-167,187-191,247-256
3bqb A:74-80,140-152,158-167,187-191,247-256
3g71 T:24-28,45-51,60-68,69-75,95-102
3opf C:389-397,412-420,421-427,450-458,485-493
3opf B:389-397,412-420,421-427,452-458,485-493
3opf B:77-87,111-118,123-128,155-162,192-200
3opf A:389-398,412-420,421-427,452-458,485-493
3qdf A:60-67,114-126,140-151,168-174,224-232
3r6o A:82-90,134-146,160-171,196-202,255-263
3r6o A:82-90,134-146,160-171,204-209,255-263
3lzk A:80-85,134-148,162-175,190-197,256-264
3lzk D:80-85,134-148,162-175,193-197,256-264
3lzk C:80-85,134-148,162-175,193-197,256-264
3lzk B:80-85,134-148,162-175,190-197,256-264
2rfw A:11-21,124-133,285-294,295-304,410-423
2rfw D:11-21,124-133,285-294,295-304,410-424
2rfw B:11-20,124-133,285-294,295-304,411-424
2rfw C:11-20,124-133,285-294,295-304,410-424
2hkl A:342-350,379-390,408-414,418-422,460-466
2q1a X:74-80,140-152,158-167,187-191,247-256
2eb6 E:56-64,102-115,131-143,167-174,231-240
2eb6 A:56-64,102-115,131-143,167-174,231-240
2eb6 D:56-64,102-115,131-143,167-174,231-240
2eb6 B:56-64,102-115,131-143,167-174,231-240
2eb6 C:56-64,102-115,131-143,167-174,231-239
2q18 X:73-80,140-152,158-167,187-191,247-256
1wzo A:43-50,93-106,119-132,149-155,207-215
1wzo D:43-50,93-106,119-132,149-155,207-215
1wzo C:43-50,93-106,119-132,149-155,207-215
1wzo B:43-50,93-106,119-132,149-155,207-215
2q19 X:74-80,140-152,158-167,187-191,247-256
2q1d X:74-80,140-152,158-167,187-191,247-256
4a17 S:31-35,52-58,65-75,76-82,102-109
3s52 B:16-23,67-79,93-104,125-136,183-191
3s52 D:16-23,67-79,93-104,125-136,183-191
3s52 A:17-23,67-79,93-104,125-136,183-191
3s52 C:16-23,67-79,93-104,125-136,183-191
4a1c S:31-35,52-58,65-75,76-82,102-109
3cxc S:24-28,45-52,60-68,69-75,95-102
2eb4 A:56-64,102-115,131-143,167-174,231-240
2eb4 C:56-64,102-115,135-143,167-174,231-240
2eb4 D:56-64,102-115,131-143,167-174,231-238
2eb4 B:56-64,102-115,131-143,167-174,231-240
2eb4 E:56-64,102-115,131-143,167-174,231-240
2wqt G:55-63,101-114,130-142,160-168,224-233
2wqt F:55-63,101-114,130-142,160-168,224-233
2wqt T:55-63,101-114,130-142,160-168,224-233
2wqt J:55-63,101-114,130-142,160-168,224-233
2wqt E:55-63,101-114,130-142,160-168,224-233
2wqt S:55-63,101-114,130-142,160-168,224-233
2wqt M:55-63,101-114,130-142,160-168,224-233
2wqt B:55-63,101-114,130-142,160-168,224-233
2wqt Q:55-63,101-114,130-142,160-168,224-233
2wqt L:55-63,101-114,130-142,160-168,224-233
2wqt C:55-63,101-114,130-142,160-168,224-233
2wqt N:55-63,101-114,130-142,160-168,224-233
2wqt R:55-63,101-114,130-142,160-168,224-233
2wqt K:55-63,101-114,130-142,160-168,224-233
2wqt P:55-63,101-114,130-142,160-168,224-233
2wqt O:55-63,101-114,130-142,160-168,224-233
2wqt D:55-63,101-114,130-142,160-168,224-233
2wqt H:55-63,101-114,130-142,160-168,224-233
2wqt A:55-63,101-114,130-142,160-168,224-233
2wqt I:55-63,101-114,130-142,160-168,224-233
2a2c A:7-12,35-42,65-74,129-137,451-458
3pfx A:11-20,121-130,282-293,298-310,416-429
3l53 B:15-22,66-78,92-103,126-134,184-192
3l53 E:15-22,66-78,92-103,126-130,184-192
3l53 C:15-22,66-78,92-103,126-135,184-192
3l53 F:15-22,66-78,92-103,126-134,184-192
3l53 A:15-22,66-78,92-103,126-134,184-192
3l53 D:15-22,66-78,92-103,126-130,184-192
3l53 D:15-22,66-78,92-103,131-135,184-192
2rfz D:11-21,124-133,285-294,295-304,410-424
2rfz A:11-19,124-133,285-294,295-304,411-423
2rfz C:11-21,124-133,285-294,295-304,410-424
2rfz B:11-21,124-133,285-294,295-304,412-424
4a1a S:31-35,52-58,65-75,76-82,102-109
2q1c X:74-80,140-152,158-167,187-191,247-256
2rfy C:11-20,124-133,285-294,295-304,410-424
2rfy D:11-20,124-133,285-294,295-304,410-424
2rfy A:11-20,124-133,285-294,295-304,411-423
2rfy B:11-21,124-133,285-294,295-304,412-424
2eb5 E:56-64,102-115,131-143,167-174,231-239
2eb5 A:56-64,102-115,131-143,167-174,231-239
2eb5 C:56-64,102-115,131-143,167-174,231-239
2eb5 B:56-64,102-115,131-143,167-174,231-239
2eb5 D:56-64,102-115,131-143,167-174,231-240
3rr6 A:60-68,111-123,137-148,165-171,221-229
3pfz A:11-20,121-130,282-293,298-310,416-429