1. e.62.1 Heme iron utilization protein-like
Heme iron utilization protein-like 2 domains; d1 - 3-helical bundle similar to the homeodomain-like fold; d2 - 6-stranded beta-barrel capped by two helices at one end, similar topology to the PH-like fold
1u9t d1u9ta1 A:29-38,61-69,70-78,120-129,131-139
2hq2 d2hq2a1 A:29-38,61-69,70-78,118-129,131-139
2j0p d2j0pa1 A:208-217,242-250,251-259,298-309,311-320
2j0r d2j0ra1 A:208-217,241-250,251-259,298-309,311-320
2j0r d2j0ra1 A:31-40,63-71,72-80,120-131,133-141
2j0p d2j0pa1 A:31-40,62-71,72-80,120-131,133-141
1u9t d1u9ta1 A:205-213,239-247,248-256,295-306,308-317
2hq2 d2hq2a1 A:205-213,239-247,248-256,295-306,308-317
2hqv d2hqva1 A:51-59,83-92,93-101,141-152,154-162
2. d.53.1 Ribosomal protein S3 C-terminal domain
Ribosomal protein S3 C-terminal domain alpha(2)-beta(4); 2 layers: alpha/beta; antiparallel beta-sheet: order 2143
1yl4 d1yl4f2 F:6-15,147-156,163-171,181-192,193-204
2b9o d2b9oc2 C:6-15,147-156,163-171,180-192,193-206
2b64 d2b64c2 C:6-15,147-156,163-171,180-192,193-206
2b9m d2b9mc2 C:6-15,147-156,163-171,180-192,193-206
3. b.44.1 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain probably related to the second domain and its superfamiy by a circular permutation !
Elongation factor/aminomethyltransferase common domain barrel, closed; n=6, S=10; greek-key
1ije d1ijea2 A:131-144,337-346,394-399,420-427,428-440
1ije d1ijea2 A:95-105,337-346,394-399,420-427,428-440
1efu d1efua2 A:83-94,302-312,352-357,370-379,380-389
1efu d1efuc2 C:83-94,302-312,352-357,370-379,380-389
1d2e d1d2eb2 B:129-140,350-360,400-405,418-427,428-440
2fx3 d2fx3a2 A:83-94,302-312,352-357,370-379,380-389
2b7b d2b7ba2 A:131-144,337-346,394-399,420-427,428-440
1efc d1efca2 A:83-94,302-312,352-357,371-379,380-389
2b7b d2b7ba2 A:95-105,337-346,394-399,420-427,428-440
1efc d1efcb2 B:83-94,302-312,352-357,371-379,380-389
1dg1 d1dg1g2 G:83-94,302-312,352-357,370-379,380-389
1d2e d1d2ec2 C:129-140,350-360,400-405,419-427,428-440
1dg1 d1dg1g2 G:112-126,302-312,352-357,370-379,380-389
1d2e d1d2ec2 C:158-172,350-360,400-405,419-427,428-440
1xb2 d1xb2a2 A:129-140,350-360,400-404,420-427,428-440
1d8t d1d8ta2 A:83-94,302-312,352-357,372-379,380-389
1aip d1aipf2 F:84-95,314-324,364-369,382-391,392-401
1d8t d1d8tb2 B:83-94,302-312,352-357,372-379,380-389
1d2e d1d2ed2 D:129-140,350-360,400-404,418-427,428-440
1d2e d1d2ea2 A:129-140,350-360,400-404,418-427,428-440
1dg1 d1dg1h2 H:83-94,302-312,352-356,370-379,380-389
1tui d1tuib2 B:84-95,314-324,364-368,382-391,392-401
1tui d1tuic2 C:84-95,314-324,364-368,382-391,392-401
1tui d1tuia2 A:84-95,314-324,364-368,382-391,392-401
2bvn d2bvna2 A:87-98,302-312,352-357,371-379,380-389
2bvn d2bvnb2 B:87-98,302-312,352-357,370-379,380-389
1ha3 d1ha3b2 B:113-127,314-324,364-368,383-391,392-401
1zc8 d1zc8y2 Y:88-99,314-324,364-369,382-391,392-401
1ttt d1ttta2 A:88-99,314-324,364-369,382-391,392-401
1ha3 d1ha3a2 A:113-127,314-324,364-368,383-391,392-401
1xb2 d1xb2a2 A:129-140,350-360,404-411,420-427,428-440
2bvn d2bvna2 A:112-126,302-312,352-357,371-379,380-389
2bvn d2bvnb2 B:112-126,302-312,352-357,370-379,380-389
1d2e d1d2ea2 A:129-140,350-360,404-411,418-427,428-440
1ttt d1ttta2 A:113-127,314-324,364-369,382-391,392-401
1zc8 d1zc8y2 Y:113-127,314-324,364-369,382-391,392-401
1d2e d1d2ed2 D:129-140,350-360,404-411,418-427,428-440
1ttt d1tttb2 B:88-99,314-324,364-369,382-391,392-401
1eft d1efta2 A:88-99,314-324,364-368,382-391,392-401
1dg1 d1dg1h2 H:83-94,302-312,356-363,370-379,380-389
1d2e d1d2ea2 A:158-172,350-360,404-411,418-427,428-440
2c77 d2c77a2 A:113-127,314-323,366-375,382-391,392-401
1d2e d1d2ec2 C:129-140,350-360,405-411,419-427,428-440
1tui d1tuib2 B:84-95,314-324,368-375,382-391,392-401
1ttt d1tttb2 B:113-127,314-324,364-369,382-391,392-401
1d2e d1d2eb2 B:129-140,350-360,405-411,418-427,428-440
1eft d1efta2 A:113-127,314-324,364-368,382-391,392-401
1d2e d1d2ed2 D:158-172,350-360,404-411,418-427,428-440
1tui d1tuic2 C:84-95,314-324,368-375,382-391,392-401
1ob2 d1ob2a2 A:112-126,302-312,352-357,370-379,380-389
1dg1 d1dg1h2 H:112-126,302-312,356-363,370-379,380-389
1tui d1tuib2 B:113-127,314-324,368-375,382-391,392-401
2b7c d2b7ca2 A:131-144,336-346,394-399,421-427,428-437
2b7c d2b7ca2 A:95-105,336-346,394-399,421-427,428-437
1d2e d1d2ec2 C:158-172,350-360,405-411,419-427,428-440
1tui d1tuic2 C:113-127,314-324,368-375,382-391,392-401
1f60 d1f60a2 A:131-144,336-346,394-399,421-427,428-437
1ijf d1ijfa2 A:131-144,336-346,394-399,421-427,428-437
1d2e d1d2eb2 B:158-172,350-360,405-411,418-427,428-440
1tui d1tuia2 A:84-95,314-324,368-375,382-391,392-401
2c78 d2c78a2 A:113-127,314-323,366-375,382-391,392-401
1f60 d1f60a2 A:95-105,336-346,394-399,421-427,428-437
1ijf d1ijfa2 A:95-105,336-346,394-399,421-427,428-437
1exm d1exma2 A:88-99,314-324,364-368,383-391,392-401
1tui d1tuia2 A:113-127,314-324,368-375,382-391,392-401
1b23 d1b23p2 P:88-99,314-324,364-368,382-391,392-401
1dg1 d1dg1g2 G:83-94,302-312,357-363,370-379,380-389
1ttt d1tttc2 C:88-99,314-324,364-368,382-391,392-401
1exm d1exma2 A:113-127,314-324,364-368,383-391,392-401
1zun d1zunb2 B:117-128,333-343,388-393,415-422,423-433
1efc d1efca2 A:83-94,302-312,357-363,371-379,380-389
1b23 d1b23p2 P:113-127,314-324,364-368,382-391,392-401
2b7c d2b7ca2 A:131-144,336-346,399-405,421-427,428-437
1ttt d1tttc2 C:113-127,314-324,364-368,382-391,392-401
1dg1 d1dg1g2 G:112-126,302-312,357-363,370-379,380-389
1zun d1zunb2 B:142-156,333-343,388-393,415-422,423-433
1efc d1efcb2 B:112-126,302-312,357-363,371-379,380-389
1efc d1efca2 A:112-126,302-312,357-363,371-379,380-389
2fx3 d2fx3a2 A:83-94,302-312,357-363,370-379,380-389
1d8t d1d8ta2 A:83-94,302-312,357-363,372-379,380-389
2fx3 d2fx3a2 A:112-126,302-312,357-363,370-379,380-389
1d8t d1d8ta2 A:112-126,302-312,357-363,372-379,380-389
1d8t d1d8tb2 B:83-94,302-312,357-363,372-379,380-389
1ttt d1tttc2 C:113-127,314-324,368-375,382-391,392-401
1ob5 d1ob5a2 A:88-99,314-324,364-368,383-391,392-401
1ob5 d1ob5c2 C:88-99,314-324,364-368,383-391,392-401
1ob5 d1ob5e2 E:88-99,314-324,364-368,383-391,392-401
1ob5 d1ob5a2 A:113-127,314-324,364-368,383-391,392-401
1ob5 d1ob5e2 E:113-127,314-324,364-368,383-391,392-401
1ob5 d1ob5c2 C:113-127,314-324,364-368,383-391,392-401
1d8t d1d8tb2 B:112-126,302-312,357-363,372-379,380-389
1jny d1jnya2 A:96-104,324-333,384-393,408-415,416-425
1g7c d1g7ca2 A:131-144,334-346,394-399,421-427,428-437
1g7c d1g7ca2 A:95-105,334-346,394-399,421-427,428-437
1skq d1skqa2 A:96-104,321-334,387-393,408-415,416-425
1skq d1skqb2 B:96-104,321-334,387-393,408-415,416-425
1zun d1zunb2 B:117-128,333-343,393-399,415-422,423-433
1jny d1jnyb2 B:96-104,321-334,387-393,409-415,416-425
1zun d1zunb2 B:142-156,333-343,393-399,415-422,423-433
2qn6 d2qn6a2 A:126-140,327-336,376-383,391-402,403-415
2qmu d2qmua2 A:126-140,327-336,376-383,391-402,403-415
1s0u d1s0ua2 A:149-163,350-359,399-407,413-424,425-437
1skq d1skqa2 A:96-104,321-334,382-387,408-415,416-425
1kk0 d1kk0a2 A:122-136,323-332,372-380,386-397,398-409
1skq d1skqb2 B:96-104,321-334,382-387,408-415,416-425
1kk2 d1kk2a2 A:122-136,323-332,372-380,386-397,398-409
2aho d2ahoa2 A:126-140,327-336,376-383,393-402,403-414
2plf d2plfa2 A:126-140,327-336,376-384,393-402,403-414
1jny d1jnyb2 B:96-104,321-334,382-387,409-415,416-425
1kjz d1kjza2 A:122-136,323-332,372-380,386-397,398-409
1kk3 d1kk3a2 A:122-136,323-332,372-380,386-397,398-409
1kk1 d1kk1a2 A:122-136,323-332,372-380,386-397,398-409
2pmd d2pmdb2 B:126-140,327-336,376-384,393-402,403-414
4. c.37.1 P-loop containing nucleoside triphosphate hydrolases division into families based on beta-sheet topologies !
P-loop containing nucleoside triphosphate hydrolases 3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
1p9r d1p9ra_ A:121-138,139-148,149-158,207-217,218-228
1p9w d1p9wa_ A:121-138,139-148,149-158,206-217,218-229
5. b.46.1 FMT C-terminal domain-like
FMT C-terminal domain-like barrel, open; n*=6, S*=10; greek-key
1f4r d1f4ra_ A:94-104,122-129,176-183,255-260,275-280
1ewn d1ewna_ A:94-104,122-129,176-183,255-260,275-280
1bnk d1bnka_ A:94-104,122-129,176-183,255-260,275-280
1f6o d1f6oa_ A:94-104,122-129,176-183,255-260,275-280
6. d.171.1 Fibrinogen C-terminal domain-like
Fibrinogen C-terminal domain-like unusual fold
1n73 d1n73b1 B:231-239,273-277,308-314,327-337,467-476
1lwu d1lwuk1 K:231-239,273-277,308-314,327-337,467-476
1lwu d1lwuh1 H:231-239,273-277,308-314,327-337,467-476
1lwu d1lwub1 B:231-239,273-277,308-314,327-337,467-476
1lwu d1lwue1 E:231-239,273-277,308-314,327-337,467-476
7. b.177.1 YmcC-like
YmcC-like 12-stranded meander beta-sheet, folded into a deformed beta-barrel; topological similarity to the LolA-like fold (scop_cf 89391)
2in5 d2in5a1 A:25-33,35-42,44-56,173-184,187-196
8. c.52.1 Restriction endonuclease-like
Restriction endonuclease-like core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest
1wdj d1wdja_ A:12-24,25-32,35-41,74-78,80-84
1wdj d1wdjc_ C:12-24,25-32,35-41,74-78,80-84
9. b.7.1 C2 domain (Calcium/lipid-binding domain, CaLB) two constituent families are related by circular permutation !
C2 domain-like sandwich; 8 strands in 2 sheets; greek-key
2isd d2isda2 A:211-223,627-640,679-694,729-735,746-756
2isd d2isda2 A:271-282,627-640,679-694,729-735,746-756
1qat d1qatb2 B:211-223,627-640,680-694,729-735,746-756
1djz d1djza2 A:211-223,627-640,680-694,729-735,746-756
1qas d1qasa2 A:211-223,627-640,680-694,729-735,746-756
1djx d1djxa2 A:211-223,627-640,680-694,729-735,746-756
1djg d1djga2 A:211-223,627-640,680-694,729-735,746-756
1qat d1qata2 A:211-223,627-640,680-694,729-735,746-756
1qas d1qasb2 B:211-223,627-640,680-694,729-735,746-756
1djy d1djya2 A:211-223,627-640,680-694,729-735,746-756
1djg d1djgb2 B:211-223,627-640,680-694,729-735,746-756
1djh d1djha2 A:211-223,627-640,680-694,729-735,746-756
1djz d1djzb2 B:211-223,627-640,680-694,729-735,746-756
1djx d1djxb2 B:211-223,627-640,680-694,729-735,746-756
1dji d1djia2 A:211-223,627-640,680-694,729-735,746-756
1djh d1djhb2 B:211-223,627-640,680-694,729-735,746-756
1djw d1djwa2 A:211-223,627-640,680-694,729-735,746-756
2isd d2isdb2 B:211-223,627-640,680-694,729-735,746-756
1djw d1djwb2 B:211-223,627-640,680-694,729-735,746-756
1dji d1djib2 B:211-223,627-640,680-694,729-735,746-756
1djy d1djyb2 B:211-223,627-640,680-694,729-735,746-756
2fju d2fjub2 B:218-227,678-689,725-729,772-778,789-799
2zkm d2zkmx2 X:218-226,676-689,725-729,772-778,789-799
10. c.19.1 FabD/lysophospholipase-like
FabD/lysophospholipase-like core: 3 layers, a/b/a; mixed beta-sheet of 6 strands, order 432156; strand 4 is antiparallel to the rest
1oxw d1oxwb_ B:1077-1088,1148-1157,1160-1167,1196-1204,1206-1215
1oxw d1oxwc_ C:2077-2088,2148-2157,2160-2167,2196-2204,2206-2215
1oxw d1oxwa_ A:77-88,148-157,160-167,196-204,206-215
1cjy d1cjya2 A:228-240,325-334,344-350,486-491,543-549
1cjy d1cjyb2 B:1228-1240,1325-1334,1344-1350,1486-1491,1543-1549
11. i.1.1 Ribosome and ribosomal fragments
Ribosome and ribosomal fragments
1qzd d1qzda_ A:112-126,302-312,352-357,370-379,380-389
12. d.162.1 LDH C-terminal domain-like
LDH C-terminal domain-like unusual fold, defines family
1a5z d1a5za2 A:164-181,190-194,198-202,264-277,282-295
1u8x d1u8xx2 X:171-186,192-200,203-212,340-345,356-361
1i10 d1i10c2 C:161-178,187-191,195-199,271-277,285-291
1i10 d1i10d2 D:161-178,187-191,195-199,271-277,285-291
1i0z d1i0zb2 B:162-179,188-192,196-200,266-278,286-292
1i0z d1i0za2 A:162-179,188-192,196-200,266-278,286-292
1i10 d1i10b2 B:161-178,187-191,195-199,265-277,285-291
1i10 d1i10a2 A:161-178,187-191,195-199,265-277,285-291
9ldt d9ldta2 A:164-181,190-194,198-202,264-276,284-290
9ldt d9ldtb2 B:164-181,190-194,198-202,264-276,284-290
1ldm d1ldma2 A:162-179,188-192,196-200,263-275,283-289
13. c.31.1 DHS-like NAD/FAD-binding domain binds cofactor molecules in the opposite direction than classical Rossmann fold !
DHS-like NAD/FAD-binding domain 3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456; Rossmann-like
1j8f d1j8fb_ B:127-139,192-197,200-205,219-223,224-231
1j8f d1j8fa_ A:127-139,192-197,200-205,219-223,224-231
2h2d d2h2da1 A:56-68,121-126,127-132,146-150,151-158
2h2f d2h2fa1 A:56-68,121-126,127-132,146-150,151-158
2h2h d2h2ha1 A:56-68,121-126,127-132,146-150,151-158
2h2i d2h2ia1 A:56-68,121-126,127-132,146-150,151-158
2h2g d2h2ga1 A:56-68,121-126,127-132,146-150,151-158
3d4b d3d4ba1 A:56-68,121-126,127-132,146-150,151-158
2h4j d2h4ja1 A:56-68,121-126,127-132,146-150,151-158
1j8f d1j8fc_ C:127-139,192-197,200-205,219-223,224-231
1yc5 d1yc5a1 A:56-68,121-126,127-132,146-150,151-158
2h4f d2h4fa1 A:56-68,121-126,127-132,146-150,151-158
1ici d1icib_ B:56-74,120-126,127-133,143-147,148-155
2b4y d2b4yb1 B:94-112,162-168,170-175,205-210,211-219
2nyr d2nyra1 A:94-112,162-168,170-175,205-210,211-219
2b4y d2b4yc1 C:94-112,162-168,170-175,205-210,211-219
2b4y d2b4yd1 D:94-112,162-168,170-175,205-210,211-219
2nyr d2nyrb1 B:94-112,162-168,170-175,205-210,211-219
14. d.26.1 FKBP-like
FKBP-like core: beta(2)-alpha-beta(2); antiparallel beta-sheet
1jvw d1jvwa_ A:33-59,87-97,99-104,132-142,159-171
2etn d2etna2 A:44-72,87-95,96-106,136-143,144-156
2etn d2etnc2 C:45-72,87-95,96-106,136-143,144-156
2etn d2etnb2 B:46-72,87-95,96-105,134-143,144-156
2f23 d2f23b2 B:44-72,86-95,96-106,136-142,145-156
1q6h d1q6hb_ B:69-113,140-151,153-159,186-196,212-224
2eul d2euld2 D:45-72,86-95,96-106,136-143,144-156
2eul d2eulb2 B:45-72,86-95,96-106,136-143,144-156
2eul d2eula2 A:45-72,86-95,96-106,136-143,144-156
2eul d2eulc2 C:45-72,86-95,96-106,136-143,144-156
1q6h d1q6ha_ A:69-113,140-151,153-159,186-196,212-224
1q6i d1q6ia_ A:69-113,140-151,153-159,186-196,212-224
1q6i d1q6ib_ B:69-113,140-151,153-158,186-196,212-224
1fd9 d1fd9a_ A:54-98,125-136,138-144,171-181,198-207
2f23 d2f23a2 A:44-72,86-95,96-106,136-143,148-156
1q6u d1q6ua_ A:69-113,139-151,153-159,186-196,212-221
15. b.55.1 PH domain-like
PH domain-like barrel barrel, partly opened; n*=6, S*=12; meander; capped by an alpha-helix
1xdv d1xdvb3 B:393-404,443-453,458-465,512-518,522-528
1ym7 d1ym7b2 B:36-51,559-568,576-585,616-625,627-634
1ym7 d1ym7d2 D:36-51,559-568,576-585,616-625,627-634
1ym7 d1ym7c2 C:36-51,559-568,576-585,616-625,627-634
1ym7 d1ym7a2 A:36-51,559-568,576-585,616-625,627-634
1omw d1omwa2 A:36-51,559-568,576-585,616-625,627-634
2bcj d2bcja2 A:36-51,559-569,578-585,616-625,627-634
16. b.44.2 Aminomethyltransferase beta-barrel domain
Elongation factor/aminomethyltransferase common domain barrel, closed; n=6, S=10; greek-key
1vly d1vlya1 A:185-197,245-254,288-298,304-308,314-318
17. e.5.1 Heme-dependent catalase-like
Heme-dependent catalase-like contains an (8,10) beta-barrel and an all-alpha domain
1ggf d1ggfb2 B:62-72,130-141,159-169,331-342,367-378
1gge d1ggec2 C:62-72,130-141,159-169,331-342,367-378
1ggj d1ggjb2 B:62-72,130-141,159-169,331-342,367-378
1ggh d1gghc2 C:62-72,130-141,159-169,331-342,367-378
1iph d1iphb2 B:62-72,130-141,159-169,331-342,367-378
1iph d1iphc2 C:62-72,130-141,159-169,331-342,367-378
1iph d1ipha2 A:62-72,130-141,159-169,331-342,367-378
1iph d1iphd2 D:62-72,130-141,159-169,331-342,367-378
1p7y d1p7yb2 B:62-72,130-141,159-169,331-342,367-378
1ggj d1ggjc2 C:62-72,130-141,159-169,331-342,367-378
1cf9 d1cf9d2 D:62-72,130-141,159-169,331-342,367-378
1cf9 d1cf9c2 C:62-72,130-141,159-169,331-342,367-378
1gg9 d1gg9c2 C:62-72,130-141,159-169,331-342,367-378
1gge d1ggeb2 B:62-72,130-141,159-169,331-342,367-378
1ggj d1ggjd2 D:62-72,130-141,159-169,331-342,367-378
1p80 d1p80c2 C:62-72,130-141,159-169,331-342,367-378
1gg9 d1gg9a2 A:62-72,130-141,159-169,331-342,367-378
1gg9 d1gg9d2 D:62-72,130-141,159-169,331-342,367-378
1cf9 d1cf9a2 A:62-72,130-141,159-169,331-342,367-378
1gge d1gged2 D:62-72,130-141,159-169,331-342,367-378
1ggh d1gghb2 B:62-72,130-141,159-169,331-342,367-378
1qws d1qwsc2 C:62-72,130-141,159-169,331-342,367-378
1gg9 d1gg9b2 B:62-72,130-141,159-169,331-342,367-378
1cf9 d1cf9b2 B:62-72,130-141,159-169,331-342,367-378
1gge d1ggea2 A:62-72,130-141,159-169,331-342,367-378
1p81 d1p81c2 C:62-72,130-141,159-169,331-342,367-378
1ggk d1ggka2 A:62-72,130-141,159-169,331-342,367-378
1ggf d1ggfd2 D:62-72,130-141,159-169,331-342,367-378
1p7z d1p7zc2 C:62-72,130-141,159-169,331-342,367-378
1qws d1qwsa2 A:62-72,130-141,159-169,331-342,367-378
1qws d1qwsd2 D:62-72,130-141,159-169,331-342,367-378
1p80 d1p80d2 D:62-72,130-141,159-169,331-342,367-378
1p81 d1p81d2 D:62-72,130-141,159-169,331-342,367-378
1p7z d1p7zb2 B:62-72,130-141,159-169,331-342,367-378
1qws d1qwsb2 B:62-72,130-141,159-169,331-342,367-378
1p81 d1p81b2 B:62-72,130-141,159-169,331-342,367-378
1ggk d1ggkd2 D:62-72,130-141,159-169,331-342,367-378
1ggf d1ggfc2 C:62-72,130-141,159-169,331-342,367-378
1qf7 d1qf7d2 D:62-72,130-141,159-169,331-342,367-378
1p80 d1p80b2 B:62-72,130-141,159-169,331-342,367-378
1qf7 d1qf7c2 C:62-72,130-141,159-169,331-342,367-378
1p81 d1p81a2 A:62-72,130-141,159-169,331-342,367-378
1p7z d1p7zd2 D:62-72,130-141,159-169,331-342,367-378
1ggh d1gghd2 D:62-72,130-141,159-169,331-342,367-378
1ggf d1ggfa2 A:62-72,130-141,159-169,331-342,367-378
1qf7 d1qf7b2 B:62-72,130-141,159-169,331-342,367-378
1ggk d1ggkc2 C:62-72,130-141,159-169,331-342,367-378
1ggk d1ggkb2 B:62-72,130-141,159-169,331-342,367-378
1p80 d1p80a2 A:62-72,130-141,159-169,331-342,367-378
1qf7 d1qf7a2 A:62-72,130-141,159-169,331-342,367-378
1p7y d1p7yd2 D:62-72,130-141,159-169,331-342,367-378
1ggj d1ggja2 A:62-72,130-141,159-169,331-342,367-378
1p7y d1p7yc2 C:62-72,130-141,159-169,331-342,367-378
1p7z d1p7za2 A:62-72,130-141,159-169,331-342,367-378
1ggh d1ggha2 A:62-72,130-141,159-169,331-342,367-378
1p7y d1p7ya2 A:62-72,130-141,159-169,331-343,367-378
18. e.1.1 Serpins
Serpins contains a cluster of helices and a beta-sandwich
1qmn d1qmna_ A:149-162,163-172,179-193,290-299,326-342
19. d.264.1 Prim-pol domain
Prim-pol domain consists of two alpha+beta domains
1g71 d1g71b_ B:114-137,140-147,148-155,295-300,301-310
1v33 d1v33a_ A:114-137,140-147,148-155,295-300,301-310
1g71 d1g71a_ A:114-137,140-147,148-155,295-300,301-310
1v34 d1v34a_ A:114-137,140-147,148-155,295-300,301-310
1zt2 d1zt2a1 A:142-165,168-173,177-183,250-255,256-263
20. d.58.4 Dimeric alpha+beta barrel dimerizes through the beta-sheet; forms beta-sheet barrel, closed (n=8, S=12); dimers may assemble in higher oligomers !
Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
2d3q d2d3qa1 A:33-49,65-72,118-126,214-226,419-432
2d3q d2d3qa1 A:51-58,65-72,118-126,214-226,419-432
2gvk d2gvka1 A:34-48,62-71,107-115,183-195,294-307
2d3q d2d3qb1 B:33-49,65-72,118-126,214-226,419-432
2d3q d2d3qb1 B:51-58,65-72,118-126,214-226,419-432
21. e.61.1 ImpE-like
ImpE-like consists of two domains; d1: right-handed superhelix of five helices; d2: pseudo beta-barrel containing structurally similar part to the "Histone-like" proteins from archaea (scop_fa 54161)
1zbp d1zbpa1 A:64-87,154-161,163-170,188-197,200-208
22. d.261.1 Hypothetical protein PH1602
Hypothetical protein PH1602 complex alpha+beta fold; contains a region of similarity to the ferredoxin-like fold
1uc2 d1uc2a_ A:115-128,203-214,227-237,382-391,466-476
List of motif hits that are not present in SCOP but are found in PDB for pattern ID: 966 (enumeration index: query2102.2103) of S5
2v7p B:164-181,190-194,198-202,264-277,282-295
2v7p D:164-181,190-194,198-202,264-277,282-290
2v7p A:164-181,190-194,198-202,264-277,282-295
2v7p C:164-181,190-194,198-202,264-277,282-290
2v6b D:165-181,190-194,198-202,264-276,283-290
3eq3 X:112-126,302-312,352-357,370-379,380-389
2kxf A:192-209,209-215,251-258,271-276,277-285
3mm1 A:33-49,65-72,118-126,214-226,419-432
2we8 A:8-19,21-32,38-46,76-83,97-107
2we8 B:5-19,21-29,38-46,76-81,99-107
2we8 A:111-124,126-135,141-149,177-185,193-202
2we8 B:111-124,126-136,141-149,177-183,193-202
3qi5 B:94-104,122-129,176-189,255-260,275-280
3qi5 A:94-104,122-129,176-189,255-260,275-280
2vse A:231-239,299-307,337-345,395-402,434-440
2vse B:231-239,299-307,337-345,395-402,434-440
2vse A:52-65,730-737,741-747,818-826,858-864
2vse B:52-65,730-737,741-747,818-826,858-864
3hie C:78-96,109-118,133-145,186-192,194-200
3hie D:76-106,106-118,133-144,186-192,194-200
3hie B:76-96,109-118,133-144,186-192,194-200
3eq4 X:112-126,302-312,352-357,370-379,380-389
2we7 B:111-124,126-135,143-149,177-184,193-202
2we7 B:5-19,21-29,38-46,76-81,99-107
2we7 A:8-19,21-32,38-46,76-82,97-107
2we7 A:111-124,126-135,143-149,177-185,193-202
3ej6 C:40-47,104-116,130-143,305-316,341-352
3ej6 B:40-47,104-116,130-143,305-316,341-352
3ej6 A:40-47,104-116,130-143,305-316,341-352
3ej6 D:40-47,104-116,130-143,305-316,341-352
3fih Z:112-126,302-312,352-357,372-379,380-389
3agp A:368-379,587-597,637-642,657-664,665-677
3riy A:94-112,162-168,170-175,205-209,211-219
3riy B:94-112,162-168,170-175,205-210,211-219
3h35 B:53-66,68-77,84-91,116-122,152-163
3h35 C:53-66,68-77,84-91,116-122,152-163
3h35 A:53-66,68-77,84-91,116-122,152-163
3qr1 D:228-240,649-661,697-712,744-750,761-772
3qr1 A:228-240,649-661,697-712,744-750,761-772
3pdh A:56-68,121-126,127-132,146-150,151-158
3pq6 C:62-72,130-141,159-169,331-342,367-378
3pq6 D:62-72,130-141,159-169,331-342,367-378
3pq6 A:62-72,130-141,159-169,331-343,367-378
3pq6 B:62-72,130-141,159-169,331-343,367-378
2y14 Z:113-127,314-324,364-368,382-391,392-401
3ttw A:62-72,130-141,159-169,331-343,367-378
3ttw C:62-72,130-141,159-169,331-342,367-378
3ttw B:62-72,130-141,159-169,331-342,367-378
3ttw D:62-72,130-141,159-169,331-342,367-378
2eww A:14-26,27-33,38-43,92-102,103-112
3dja A:54-65,396-402,463-470,525-532,538-552
3dja B:54-65,396-402,463-470,525-532,538-552
3qnr C:31-45,60-68,103-111,178-190,293-306
3qnr B:31-45,60-68,103-111,178-190,293-306
3qnr A:31-45,60-68,103-111,178-190,293-306
3ot2 A:10-18,23-28,29-34,66-73,74-81
3ot2 B:10-18,23-28,29-34,66-73,74-81
3gls E:188-200,252-258,260-265,278-282,283-290
3ttt A:62-72,130-141,159-169,331-342,367-378
3ttt B:62-72,130-141,159-169,331-342,367-378
3ttt C:62-72,130-141,159-169,331-342,367-378
3ttt D:62-72,130-141,159-169,331-342,367-378
2y12 Z:113-127,314-324,364-368,382-391,392-401
2y16 Z:113-127,314-324,364-368,382-391,392-401
3pov A:178-197,339-346,356-364,400-411,432-442
3j00 C:6-16,145-155,162-170,178-191,192-206
2y0u Z:88-100,314-324,364-368,382-391,392-401
2y0u Z:113-127,314-324,364-368,382-391,392-401
3mmp A:1083-1094,1302-1312,1352-1357,1371-1379,1380-1392
3mmp C:1083-1094,1302-1312,1352-1357,1371-1379,1380-1389
3jvv A:2-14,15-23,26-31,78-89,90-99
3jvv C:2-14,15-23,26-31,78-89,90-99
3jvv B:2-14,15-23,26-31,78-89,90-99
2j3u D:79-87,120-124,146-150,163-173,279-288
2j3u B:79-87,120-124,146-151,163-173,278-288
2j3u C:79-87,120-124,146-151,163-173,279-288
3jvu A:2-14,15-23,26-31,78-89,90-99
3jvu B:2-14,15-22,26-31,78-89,90-99
3jvu C:2-14,15-23,26-31,78-89,90-99
3izv C:112-126,302-312,352-357,370-379,380-392
2hdn F:83-94,302-312,357-363,371-379,380-389
2hdn D:83-94,302-312,357-363,371-379,380-389
2hdn J:112-126,302-312,357-363,371-379,380-389
2hdn L:112-126,302-312,357-363,371-379,380-389
2hdn J:83-94,302-312,352-357,371-379,380-389
2hdn L:83-94,302-312,352-357,371-379,380-389
2hdn J:83-94,302-312,357-363,371-379,380-389
2hdn L:83-94,302-312,357-363,371-379,380-389
2hdn B:112-126,302-312,357-363,371-379,380-389
2hdn B:83-94,302-312,352-357,371-379,380-389
2hdn B:83-94,302-312,357-363,371-379,380-389
2hdn F:83-94,302-312,352-357,371-379,380-389
2hdn D:112-126,302-312,357-363,371-379,380-389
2hdn H:83-94,302-312,352-357,371-379,380-389
2hdn H:112-126,302-312,357-363,371-379,380-389
2hdn D:83-94,302-312,352-357,371-379,380-389
2hdn F:112-126,302-312,357-363,371-379,380-389
2hdn H:83-94,302-312,357-363,371-379,380-389
3kyh A:279-297,303-312,424-435,466-478,488-498
3kyh B:279-297,303-312,424-435,466-478,488-497
2dcu A:123-137,324-333,373-381,389-398,399-410
3p3m E:126-140,327-336,376-384,391-402,403-415
3p3m A:126-140,327-336,376-384,392-402,403-414
3p3m F:126-140,327-335,376-384,391-402,403-415
3p3m C:126-140,327-336,376-384,391-402,403-415
3p3m D:126-140,327-335,376-384,392-402,403-414
3p3m B:126-140,327-336,376-384,391-402,403-415
2ius B:947-955,965-972,974-980,1202-1209,1214-1219
2ius F:947-955,965-972,974-980,1202-1209,1214-1219
2ius A:947-954,965-972,974-980,1202-1209,1214-1219
2ius C:947-954,965-972,974-980,1202-1209,1214-1219
2ius E:947-955,965-972,974-980,1202-1209,1214-1219
2ius D:947-954,965-972,974-980,1202-1209,1214-1219
2d39 A:117-125,158-162,184-189,201-211,317-326
2d39 B:117-125,158-162,184-189,201-211,318-326
2d39 C:117-125,158-162,184-189,201-211,317-326
2oef A:9-23,167-171,172-176,332-340,346-354
3mm3 A:33-45,65-72,118-126,214-226,419-432
3agq A:368-379,587-597,637-642,657-664,665-677
3kg4 A:32-45,48-61,110-123,200-210,211-215
2xf2 E:2-9,66-78,92-105,267-278,303-314
2xf2 A:2-9,66-78,92-105,267-278,303-314
3pq8 A:62-72,130-141,159-169,331-343,367-378
3pq8 D:62-72,130-141,159-169,331-342,367-378
3pq8 B:62-72,130-141,159-169,331-342,367-378
3pq8 C:62-72,130-141,159-169,331-342,367-378
2wrq Z:113-127,314-323,365-375,382-391,392-401
3psc A:36-51,559-568,576-585,616-625,627-634
2far B:677-696,699-705,708-715,773-777,781-787
2der B:76-93,282-294,327-334,344-351,352-361
3pq3 B:62-72,130-141,159-169,331-342,367-378
3pq3 D:62-72,130-141,159-169,331-342,367-378
3pq3 C:62-72,130-141,159-169,331-342,367-378
3pq3 A:62-72,130-141,159-169,331-343,367-378
2i3e A:54-61,96-109,110-118,191-198,200-207
3pen A:126-140,327-336,376-383,393-402,403-414
3qr0 A:228-240,649-661,697-712,744-750,761-772
3oe2 A:96-114,141-152,154-160,184-194,211-220
3m1u A:100-109,151-158,181-189,202-209,210-217
3m1u B:100-109,151-158,181-189,202-209,210-217
2j3f C:79-87,120-124,146-151,163-173,278-288
2iuf A:2-9,66-80,94-105,267-278,303-314
2iuf E:2-9,66-80,94-105,267-278,303-314
2qfj A:191-209,209-215,251-258,271-276,277-285
2qfj B:191-209,209-215,251-258,271-276,277-285
3glt A:188-200,252-258,260-265,278-282,283-290
2xxj A:142-158,167-171,175-179,245-258,263-275
2xxj C:142-158,167-171,175-179,245-258,263-275
2xxj D:141-158,167-171,175-179,245-258,263-275
2xxj B:141-158,167-171,175-179,245-258,263-275
2faq A:677-696,699-704,708-715,773-777,781-787
2faq B:677-696,699-705,708-715,773-777,781-787
2fao B:677-696,699-704,708-715,773-777,781-787
3qns A:31-45,60-68,103-111,178-190,293-306
3pq7 C:62-72,130-141,159-169,331-342,367-378
3pq7 A:62-72,130-141,159-169,331-343,367-378
3pq7 B:62-72,130-141,159-169,331-342,367-378
3pq7 D:62-72,130-141,159-169,331-342,367-378
3p9r A:62-72,130-141,159-169,331-343,367-378
3p9r D:62-72,130-141,159-169,331-342,367-378
3p9r B:62-72,130-141,159-169,331-343,367-378
3p9r C:62-72,130-141,159-169,331-342,367-378
2y0y Z:113-127,314-324,364-368,382-391,392-401
2xxb B:164-181,190-194,198-202,264-277,282-295
2deu A:74-93,282-295,327-334,342-351,352-361
2deu B:74-93,282-295,327-334,342-351,352-361
3ttx D:62-72,130-141,159-169,331-342,367-378
3ttx C:62-72,130-141,159-169,331-342,367-378
3ttx A:62-72,130-141,159-169,331-342,367-378
3ttx B:62-72,130-141,159-169,331-342,367-378
2hma A:75-94,286-296,327-334,344-351,352-361
3fic Z:113-127,314-324,364-368,383-391,392-401
2ovi C:28-36,58-67,68-76,116-127,129-138
2ovi D:28-37,58-67,68-76,116-127,129-138
2ovi A:28-36,58-67,68-76,116-127,129-138
2ovi B:28-36,58-67,68-76,116-127,129-138
3bxv A:16-38,39-52,70-81,159-169,284-299
3pvw A:36-51,559-568,576-585,616-625,627-634
2iut A:422-430,440-447,449-455,676-683,688-693
2iut B:422-430,440-447,449-455,676-683,688-693
3glu A:188-200,252-258,260-265,278-282,283-290
2j1g A:79-87,120-124,146-151,165-173,279-286
2j1g D:79-87,120-124,146-151,163-173,279-288
2j1g E:79-87,120-124,146-151,163-173,278-288
2j1g B:79-87,120-124,146-151,163-173,278-288
2oeg A:9-23,167-171,172-176,332-339,347-354
3ttu A:62-72,130-141,159-169,331-343,367-378
3ttu B:62-72,130-141,159-169,331-342,367-378
3ttu C:62-72,130-141,159-169,331-342,367-378
3ttu D:62-72,130-141,159-169,331-342,367-378
2vcd A:1-23,52-60,62-68,98-105,122-131
2oap 2:132-142,143-152,155-161,206-215,221-229
2oap 1:132-142,143-152,155-161,206-215,221-228
2gsz E:14-26,27-33,38-43,91-102,103-113
2gsz C:14-26,27-33,38-43,91-102,103-111
2gsz F:14-26,27-33,38-43,91-102,103-112
2gsz A:14-26,27-33,38-43,91-102,103-112
2gsz B:14-26,27-33,38-43,91-102,103-112
2gsz D:14-26,27-33,38-43,91-102,103-112
3ttv C:62-72,130-141,159-169,331-342,367-378
3ttv A:62-72,130-141,159-169,331-342,367-378
3ttv B:62-72,130-141,159-169,331-342,367-378
3ttv D:62-72,130-141,159-169,331-342,367-378
3bgy B:1016-1034,1035-1043,1141-1152,1185-1197,1207-1216
3bgy A:16-33,35-43,141-152,185-197,207-216
2e1u A:30-39,81-86,93-99,138-142,143-149
2hcj B:83-94,302-312,352-357,370-379,380-389
2hcj B:112-126,302-312,357-363,370-379,380-389
2hcj B:83-94,302-312,357-363,370-379,380-389
2uz5 A:1-23,49-60,62-67,95-105,122-134
3m1m A:71-78,106-114,142-150,156-165,169-174
2h59 A:56-69,121-126,127-132,146-150,151-158
3nn4 A:29-51,51-58,66-74,131-142,221-227
3nn4 E:29-52,51-58,66-74,131-142,221-227
3nn4 D:29-51,51-58,66-74,131-142,221-227
3nn4 B:29-52,51-58,66-74,131-142,221-227
3nn4 C:29-51,51-58,66-74,131-142,221-227
2vsa A:231-239,299-307,337-345,395-402,434-440
2vsa A:52-65,730-737,741-747,818-826,858-864
3cw2 E:126-140,327-336,376-382,391-402,403-415
3cw2 A:126-140,327-334,376-384,392-399,406-414
2i5k A:22-33,191-195,196-200,341-347,356-362
2iuu F:422-430,440-447,449-455,676-683,688-693
2iuu E:422-430,440-447,449-455,676-683,688-693
2iuu C:422-430,440-447,449-455,676-683,688-693
2iuu A:422-430,440-447,449-455,676-683,688-693
2iuu D:422-430,440-447,449-455,676-683,688-693
2iuu B:422-430,440-447,449-455,676-683,688-693
2qze B:16-33,35-43,140-152,185-197,207-216
2qze A:16-32,35-43,141-152,185-197,207-216
2wrn Z:113-127,314-324,364-369,382-391,392-401
3pq5 D:62-72,130-141,159-169,331-342,367-378
3pq5 A:62-72,130-141,159-169,331-343,367-378
3pq5 C:62-72,130-141,159-169,331-342,367-378
3pq5 B:62-72,130-141,159-169,331-342,367-378
2ph0 A:27-35,59-68,69-77,117-128,130-139
2ph0 B:27-35,59-68,69-77,117-128,130-138
3dlw A:149-162,163-172,179-193,292-301,328-344
3mca A:301-314,496-506,545-550,573-579,580-592
3on5 B:2-14,16-26,33-41,71-77,95-103
3on5 A:2-14,16-27,33-41,71-79,93-103
3jr3 A:56-68,121-126,127-132,146-150,151-158
3p27 A:290-304,504-514,561-566,590-597,598-610
3p27 A:290-304,504-514,566-572,590-597,598-610
3p27 B:290-304,504-514,566-572,590-597,598-610
3p27 B:290-304,504-514,561-566,590-597,598-610
3p27 B:258-269,504-514,561-566,590-597,598-610
3dpm B:54-65,396-402,463-470,525-532,538-552
3dpm A:54-65,396-402,463-470,525-532,538-552
2elf A:77-91,261-270,311-320,331-336,342-350
2w4b A:156-176,320-327,337-345,383-394,416-426
2w4b B:156-179,320-327,337-345,383-394,416-426
2h4h A:56-68,121-126,127-132,146-150,151-158
3pq2 B:62-72,130-141,159-169,331-342,367-378
3pq2 C:62-72,130-141,159-169,331-342,367-378
3pq2 A:62-72,130-141,159-169,331-343,367-378
3pq2 D:62-72,130-141,159-169,331-342,367-378
2xr7 A:25-35,76-82,88-94,133-137,138-144
2xqd Z:113-127,314-325,364-369,384-391,392-404
2d74 A:123-137,324-333,373-381,389-398,399-410
3fhd A:180-197,339-346,356-364,399-411,432-442
3izw C:112-126,302-312,352-357,370-379,380-392
3izw C:87-98,302-312,352-357,370-379,380-392
2v6m A:165-181,190-194,198-202,264-277,282-290
2v6m C:165-181,190-194,198-202,264-277,282-295
3mm2 A:33-49,65-72,118-126,214-226,419-432
3dor A:54-65,396-402,463-470,525-532,538-552
3dor B:54-65,396-402,463-470,525-532,538-552
2qy2 A:16-33,35-43,140-149,185-197,207-216
2qy2 B:1016-1034,1035-1043,1140-1152,1185-1197,1207-1216
3p9p A:62-72,130-141,159-169,331-343,367-378
3p9p D:62-72,130-141,159-169,331-342,367-378
3p9p B:62-72,130-141,159-169,331-343,367-378
3p9p C:62-72,130-141,159-169,331-342,367-378
2y10 Z:113-127,314-324,364-368,384-391,392-401
2oaq 2:132-142,143-152,155-161,206-215,221-229
2oaq 1:132-142,143-152,155-161,206-215,221-228
3cik A:36-51,559-568,576-585,616-625,627-634
3op1 C:175-184,186-194,207-213,221-231,268-278
3ep2 X:112-126,302-312,352-357,370-379,380-389
3ohm B:223-234,725-737,771-776,819-825,836-847
2w45 B:156-179,319-327,337-346,383-394,416-426
2w45 A:156-179,319-327,337-346,383-394,416-426
3afv A:33-49,65-72,118-126,214-226,419-432
3afv A:51-58,65-72,118-126,214-226,419-432
3p26 A:290-304,504-514,561-566,591-597,598-607
3p26 A:290-304,504-514,566-572,591-597,598-607
3p26 B:290-304,504-514,566-572,591-597,598-610
3p26 B:290-304,504-514,561-566,591-597,598-610
3p26 B:257-269,504-514,561-566,591-597,598-610
3pvu A:36-51,559-568,577-585,616-625,627-634
2y18 Z:113-127,314-324,364-368,384-391,392-401
3h3f B:161-178,187-191,195-199,271-277,285-291
3h3f G:161-178,187-191,195-199,265-277,285-291
3h3f F:161-178,187-191,195-199,271-277,285-291
2y0w Z:88-100,314-324,364-368,382-391,392-401
2y0w Z:113-127,314-324,364-368,382-391,392-401
3pq4 D:62-72,130-141,159-169,331-342,367-378
3pq4 B:62-72,130-141,159-169,331-342,367-378
3pq4 C:62-72,130-141,159-169,331-342,367-378
3pq4 A:62-72,130-141,159-169,331-343,367-378
3krx A:36-51,559-568,576-585,616-625,627-634
3agj E:130-143,321-333,384-393,408-415,416-425
3agj A:130-143,321-334,385-393,409-415,416-425
3agj C:130-143,321-333,384-393,409-415,416-425
3agj G:130-143,321-333,384-393,409-415,416-425
2e37 G:142-158,167-171,175-179,245-258,263-275
2e37 C:142-158,167-171,175-179,245-258,263-270
2e37 E:142-158,167-171,175-179,245-258,263-270
2e37 A:142-158,167-171,175-179,245-258,263-275
2e37 H:142-158,167-171,175-179,245-258,263-270
3krw A:36-51,559-568,576-585,616-625,627-634
2ewv A:14-26,27-33,38-43,92-102,103-112
3p9s B:62-72,130-141,159-169,331-342,367-378
3p9s D:62-72,130-141,159-169,331-342,367-378
3p9s C:62-72,130-141,159-169,331-342,367-378
3p9s A:62-72,130-141,159-169,331-343,367-378
3a58 C:76-97,109-118,133-145,186-192,194-201
3a58 E:75-95,109-118,133-145,186-192,194-200
3a58 A:76-97,109-118,133-145,186-192,194-201
3p9q D:62-72,130-141,159-169,331-342,367-378
3p9q B:62-72,130-141,159-169,331-342,367-378
3p9q A:62-72,130-141,159-169,331-343,367-378
3p9q C:62-72,130-141,159-169,331-343,367-378
3s01 A:484-492,498-507,538-546,561-566,571-580
2cb2 C:16-38,39-52,70-81,159-169,284-299
2cb2 E:16-38,39-52,70-81,159-169,284-299
1r5b A:227-235,558-567,617-626,642-648,649-661
1r5o A:227-235,558-567,617-626,642-648,649-661
1zt2 C:142-165,168-173,177-183,250-255,256-263