1. e.3.1 beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like contains a cluster of helices and an alpha+beta sandwich 2drw d2drwf1 F:7-19,21-30,31-41,313-323,324-334 1mwt d1mwtb3 B:329-343,344-352,354-364,612-622,626-635 2z2l d2z2lb1 B:266-285,287-297,298-308,566-577,581-591 2zc4 d2zc4e1 E:266-285,287-297,298-308,566-577,581-591 1hvb d1hvba_ A:7-22,24-33,34-43,304-312,316-325 1pwc d1pwca_ A:7-22,24-33,34-43,304-312,316-325 1pwg d1pwga_ A:7-22,24-33,34-43,304-312,316-325 1iki d1ikia_ A:7-22,24-33,34-43,304-312,316-325 2z2l d2z2le1 E:266-285,287-297,298-308,566-577,581-591 2zc4 d2zc4b1 B:266-285,287-297,298-308,568-577,581-591 2efx d2efxc1 C:3-19,21-30,31-41,313-323,324-334 2efu d2efuf1 F:4-19,21-30,31-41,313-323,324-334 2efu d2efua1 A:2-19,21-30,31-41,313-323,324-334 2z2m d2z2me1 E:266-285,287-297,298-308,566-577,581-591 1rp5 d1rp5b4 B:266-285,287-297,298-307,566-577,581-591 1qme d1qmea4 A:266-285,287-297,298-307,566-577,581-591 1k25 d1k25b4 B:1266-1285,1287-1297,1298-1307,1566-1577,1581-1591 2olu d2olua2 A:336-350,357-368,369-378,602-613,615-625 1iyq d1iyqa_ A:28-41,42-52,53-61,242-252,257-267 2olv d2olva2 A:336-350,357-368,369-378,602-613,615-625 2drw d2drwc1 C:3-19,21-30,31-41,313-323,324-334 1k25 d1k25c4 C:2266-2285,2287-2297,2298-2307,2566-2577,2582-2591 2zc3 d2zc3b1 B:266-285,287-297,298-307,566-577,581-591 2drw d2drwa1 A:2-19,21-30,31-41,313-323,324-334 2z2m d2z2mb1 B:266-285,287-297,298-307,566-577,581-591 1pyy d1pyya4 A:266-285,287-297,298-307,566-577,581-591 1pmd d1pmda4 A:266-285,287-297,298-308,566-577,581-591 1rp5 d1rp5a4 A:266-285,287-297,298-307,566-577,581-591 1k25 d1k25d4 D:3266-3285,3287-3297,3298-3307,3566-3577,3581-3591 1k25 d1k25a4 A:266-285,287-297,298-307,566-577,582-591 2c5w d2c5wb1 B:303-316,327-337,338-347,578-588,590-599 2zc3 d2zc3e1 E:266-285,287-297,298-307,566-577,581-591 1hzo d1hzob_ B:28-41,42-52,53-61,242-252,257-267 2efx d2efxa1 A:2-19,21-30,31-41,313-323,324-334 2olv d2olvb2 B:336-350,357-368,369-378,603-613,615-625 1qmf d1qmfa4 A:266-285,287-297,298-307,566-577,581-591 1mwr d1mwrb3 B:329-341,344-353,354-364,612-622,626-635 3dwk d3dwkc2 C:336-350,357-368,369-378,602-613,615-625 2dns d2dnsa1 A:2-19,21-30,31-41,313-323,324-334 1hzo d1hzoa_ A:27-41,42-52,53-61,242-252,257-267 3dwk d3dwkb2 B:336-350,357-368,369-378,602-613,615-625 2dns d2dnsc1 C:3-19,21-30,31-41,313-323,324-334 3dwk d3dwkd2 D:336-350,357-368,369-378,602-613,615-625 3dwk d3dwka2 A:336-350,357-368,369-378,602-613,615-625 1mwu d1mwua3 A:329-341,344-353,354-364,613-622,626-635 1iyo d1iyoa_ A:28-41,42-52,53-61,242-252,257-267 2efu d2efuc1 C:3-19,21-30,31-41,313-323,324-334 1iyp d1iypa_ A:28-41,42-52,53-61,242-252,257-267 2efu d2efub1 B:4-19,21-30,34-41,313-323,324-334 1bza d1bzaa_ A:28-41,42-52,53-61,242-252,257-267 1iys d1iysa_ A:28-41,42-52,53-61,242-252,257-267 1mws d1mwsa3 A:329-341,344-353,354-364,613-622,626-635 2c6w d2c6wb1 B:303-317,327-337,338-347,578-588,590-599 2blm d2blmb_ B:32-41,42-52,53-61,242-252,257-267 2drw d2drwb1 B:2-19,21-30,31-41,313-323,324-334 2efx d2efxb1 B:2-19,21-30,31-41,313-323,324-334 2efx d2efxe1 E:2-19,21-30,31-41,313-323,324-334 2efu d2efud1 D:2-19,21-30,34-41,313-323,324-334 3brm d3brmb1 B:13-26,48-56,58-65,272-281,291-300 2efx d2efxd1 D:2-19,21-30,34-41,313-323,324-334 2drw d2drwe1 E:2-19,21-30,31-41,313-323,324-334 1ci9 d1ci9a_ A:15-33,36-45,46-56,352-361,362-371 1dy6 d1dy6b_ B:24-41,42-52,53-61,241-252,257-268 1dy6 d1dy6a_ A:24-41,41-52,53-61,241-252,257-268 2osu d2osub1 B:13-26,48-56,58-65,272-282,290-300 1ei5 d1ei5a3 A:5-21,23-32,34-43,293-303,304-314 3brm d3brma1 A:13-26,48-56,58-65,272-282,290-300 2dns d2dnsb1 B:2-19,21-30,34-41,313-323,324-334 2drw d2drwd1 D:2-19,21-30,34-41,313-323,324-334 1mki d1mkib_ B:13-26,48-56,58-65,272-282,290-300 2efu d2efue1 E:2-19,21-30,31-41,313-323,324-334 1ci8 d1ci8a_ A:15-33,36-45,46-56,352-361,362-371 1mki d1mkia_ A:13-26,48-56,58-65,272-282,290-300 2dns d2dnsd1 D:2-19,21-30,34-41,313-323,324-334 4blm d4blma_ A:31-41,42-52,53-61,241-252,257-268 1o7e d1o7ea_ A:32-41,42-52,53-61,242-253,257-267 1n4o d1n4oa_ A:32-41,42-52,53-61,242-253,257-267 2osu d2osua1 A:13-26,48-56,58-65,272-282,290-300 1w8q d1w8qc1 C:1-15,21-31,32-40,416-427,428-439 2bg1 d2bg1a1 A:395-410,420-430,431-440,660-667,669-678 2blm d2blma_ A:32-41,42-52,53-61,241-252,257-268 1w8q d1w8qb1 B:1-15,21-31,32-40,416-427,428-439 2fff d2fffb1 B:395-410,420-430,431-440,660-667,669-678 1w8y d1w8yc1 C:1-15,21-31,32-40,416-427,428-439 2uwx d2uwxa1 A:395-410,420-430,431-440,660-667,669-678 1ci8 d1ci8b_ B:15-33,36-45,46-56,352-361,362-371 1htz d1htzb_ B:26-41,42-52,53-61,242-254,258-267 2dns d2dnse1 E:2-19,21-30,31-41,313-323,324-334 1w8q d1w8qa1 A:1-15,20-31,32-40,416-427,428-439 1htz d1htzd_ D:26-41,42-52,53-61,242-254,258-267 1i2w d1i2wb_ B:30-41,42-52,53-61,241-254,257-268 1i2s d1i2sa_ A:31-41,42-52,53-61,241-254,257-268 1htz d1htze_ E:26-41,42-52,53-61,242-254,258-267 1w8y d1w8ya1 A:1-15,20-31,32-40,416-427,428-439 1i2w d1i2wa_ A:31-41,42-52,53-61,241-254,257-268 1ci9 d1ci9b_ B:15-33,36-45,46-56,353-361,362-371 1i2s d1i2sb_ B:31-41,42-52,53-61,241-254,257-268 1w79 d1w79a1 A:1-15,20-31,32-40,416-427,428-439 1htz d1htzc_ C:26-41,42-52,53-61,242-254,258-267 1w8y d1w8yb1 B:1-15,21-31,33-40,416-427,428-439 1htz d1htzf_ F:26-41,41-52,53-61,242-252,258-267 1n4o d1n4ob_ B:32-41,42-52,53-61,242-253,258-267 1mwu d1mwub3 B:329-341,344-353,354-364,615-622,627-633 1w79 d1w79c1 C:1-15,20-31,32-40,416-427,428-439 1kvm d1kvma_ A:5-24,26-35,37-45,321-331,332-342 1htz d1htza_ A:26-41,42-52,53-61,242-254,258-267 1kdw d1kdwa_ A:5-24,26-35,37-45,321-331,332-342 1kvm d1kvmb_ B:5-24,26-35,37-45,321-331,332-342 1vqq d1vqqa3 A:329-341,344-353,354-364,612-622,627-635 1mbl d1mblb_ B:31-41,42-52,53-61,242-254,257-267 1mbl d1mbla_ A:31-41,42-52,53-61,242-254,257-267 1xx2 d1xx2a_ A:4-24,26-35,36-45,321-331,332-342 1mws d1mwsb3 B:329-341,344-353,354-364,612-622,627-635 4blm d4blmb_ B:31-41,42-52,53-61,242-254,257-267 1w79 d1w79b1 B:1-15,20-31,32-40,416-427,428-439 1fr1 d1fr1b_ B:4-24,25-35,37-45,321-331,332-342 1fco d1fcoa_ A:2-21,23-32,34-42,318-328,329-339 1ga9 d1ga9a_ A:5-24,26-35,37-45,321-331,332-342 1ke3 d1ke3b_ B:5-24,26-35,37-45,321-331,332-342 1l0e d1l0ea_ A:5-24,26-35,37-45,321-331,332-342 2hdq d2hdqb1 B:5-24,26-35,37-45,321-331,332-342 1ke0 d1ke0a_ A:5-24,26-35,37-45,321-331,332-342 2r9x d2r9xb1 B:5-24,26-35,37-45,321-331,332-342 1llb d1llba_ A:5-24,26-35,37-45,321-331,332-342 1o7e d1o7eb_ B:32-41,42-52,53-61,242-253,258-267 1fsw d1fswa_ A:5-24,26-35,37-45,321-331,332-342 2hdq d2hdqa1 A:5-24,26-35,37-45,321-331,332-342 1pi5 d1pi5a_ A:5-24,26-35,37-45,321-331,332-342 2rcx d2rcxa1 A:5-24,26-35,37-45,321-331,332-342 1vqq d1vqqb3 B:329-341,344-353,354-364,612-622,627-635 1w79 d1w79d1 D:1-15,20-31,32-40,416-427,428-439 1fr6 d1fr6b_ B:4-24,25-35,37-45,321-331,332-342 1l0d d1l0da_ A:5-24,26-35,37-45,321-331,332-342 1fsy d1fsyb_ B:5-24,26-35,37-45,321-331,332-342 2pu4 d2pu4a1 A:5-24,26-35,37-45,321-331,332-342 1iel d1ielb_ B:5-24,26-35,37-45,321-331,332-342 1l2s d1l2sb_ B:5-24,26-35,37-45,321-331,332-342 1ll9 d1ll9a_ A:5-24,26-35,37-45,321-331,332-342 1wyc d1wyca1 A:72-81,81-90,91-101,346-355,356-365 1pi4 d1pi4a_ A:5-24,26-35,37-45,321-331,332-342 2hdr d2hdra1 A:5-24,26-35,37-45,321-331,332-342 1mxo d1mxoa_ A:5-24,26-35,37-45,321-331,332-342 1xx2 d1xx2b_ B:1004-1024,1026-1035,1036-1045,1321-1331,1332-1342 1pi4 d1pi4b_ B:5-24,26-35,37-45,321-331,332-342 1ke3 d1ke3a_ A:5-24,26-35,37-45,321-331,332-342 1mwt d1mwta3 A:329-341,344-352,354-364,612-622,627-635 1llb d1llbb_ B:5-24,26-35,37-45,321-331,332-342 1l0d d1l0db_ B:5-24,26-35,37-45,321-331,332-342 1my8 d1my8a_ A:5-24,26-35,37-45,321-331,332-342 1i5q d1i5qa_ A:5-24,26-35,37-45,321-331,332-342 1w8y d1w8yd1 D:1-15,20-31,32-40,416-427,428-439 2p9v d2p9va1 A:5-24,26-35,37-45,321-331,332-342 2pu2 d2pu2a1 A:5-24,26-35,37-45,321-331,332-342 1l0g d1l0ga_ A:5-24,26-35,37-45,321-331,332-342 2hdu d2hdua1 A:5-24,26-35,37-45,321-331,332-342 1fr6 d1fr6a_ A:4-24,26-35,37-45,321-331,332-342 1wyb d1wyba1 A:72-81,81-90,91-101,346-355,356-365 1l0f d1l0fa_ A:5-24,26-35,37-45,321-331,332-342 2dcf d2dcfa1 A:72-81,81-90,91-101,346-355,356-365 1ke4 d1ke4a_ A:5-24,26-35,37-45,321-331,332-342 2hds d2hdsa1 A:5-24,26-35,37-45,321-331,332-342 2ffy d2ffya1 A:5-24,26-35,37-45,321-331,332-342 1iel d1iela_ A:5-24,26-35,37-45,321-331,332-342 1ga0 d1ga0a_ A:4-24,26-35,36-45,324-334,335-345 1fcn d1fcna_ A:2-21,23-32,34-42,318-328,329-339 1l2s d1l2sa_ A:5-24,26-35,37-45,321-331,332-342 1my8 d1my8b_ B:5-24,26-35,37-45,321-331,332-342 2p9v d2p9vb1 B:5-24,26-35,37-45,321-331,332-342 1iem d1iema_ A:5-24,26-35,37-45,321-331,332-342 1ll5 d1ll5a_ A:5-24,26-35,37-45,321-331,332-342 2hds d2hdsb1 B:5-24,26-35,37-45,321-331,332-342 2pu2 d2pu2b1 B:5-24,26-35,37-45,321-331,332-342 2hdu d2hdub1 B:5-24,26-35,37-45,321-331,332-342 2j9p d2j9pb1 B:5-19,24-34,35-43,417-428,430-441 1fsy d1fsya_ A:5-24,26-35,37-45,321-331,332-342 1l0f d1l0fb_ B:5-24,26-35,37-45,321-331,332-342 1pi5 d1pi5b_ B:5-24,26-35,37-45,321-331,332-342 2ffy d2ffyb1 B:5-24,26-35,37-45,321-331,332-342 1kvl d1kvla_ A:5-24,26-35,37-45,321-331,332-342 2pu4 d2pu4b1 B:5-24,26-35,37-45,321-331,332-342 1xgi d1xgia1 A:5-24,26-35,37-45,321-331,332-342 1bls d1blsb_ B:4-24,26-35,36-45,321-331,332-342 1o07 d1o07a_ A:5-24,26-35,37-45,321-331,332-342 1ke4 d1ke4b_ B:5-24,26-35,37-45,321-331,332-342 1kvl d1kvlb_ B:5-24,26-35,37-45,321-331,332-342 2r9w d2r9wa1 A:5-24,26-35,37-45,321-331,332-342 1l0e d1l0eb_ B:5-24,26-35,37-45,321-331,332-342 2r9x d2r9xa1 A:5-24,26-35,37-45,321-331,332-342 2j9p d2j9pa1 A:5-18,24-34,35-43,417-428,430-441 2i72 d2i72a1 A:5-24,26-35,37-45,321-331,332-342 1c3b d1c3ba_ A:5-24,26-35,37-45,321-331,332-342 1ll9 d1ll9b_ B:5-24,26-35,37-45,321-331,332-342 1xgj d1xgja1 A:5-24,26-35,37-45,321-331,332-342 1rgz d1rgza_ A:4-24,26-35,36-45,324-334,335-345 1mwr d1mwra3 A:329-341,344-353,354-363,612-622,627-635 1kds d1kdsb_ B:5-24,26-35,37-45,321-331,332-342 1ll5 d1ll5b_ B:5-24,26-35,37-45,321-331,332-342 2q9n d2q9na1 A:4-24,26-35,36-45,321-331,332-342 2rcx d2rcxb1 B:5-24,26-35,37-45,321-331,332-342 1bls d1blsa_ A:4-24,26-35,37-45,321-331,332-342 2hdr d2hdrb1 B:5-24,26-35,37-45,321-331,332-342 1onh d1onha_ A:4-24,26-35,36-45,324-334,335-345 2q9m d2q9ma1 A:4-24,26-35,36-45,321-331,332-342 1kdw d1kdwb_ B:5-24,26-35,37-45,321-331,332-342 1q2q d1q2qa_ A:4-24,26-35,36-45,324-334,335-345 2i72 d2i72b1 B:5-24,26-35,37-45,321-331,332-342 1gce d1gcea_ A:4-24,26-35,36-45,324-334,335-345 1w8q d1w8qd1 D:1-15,20-31,32-40,416-427,428-439 1kds d1kdsa_ A:5-24,26-35,37-45,321-331,332-342 1iem d1iemb_ B:5-24,26-35,37-45,321-331,332-342 1rgy d1rgya_ A:4-24,26-35,37-45,321-331,332-342 2r9w d2r9wb1 B:4-24,26-35,37-45,321-331,332-342 1ke0 d1ke0b_ B:5-24,26-35,37-45,321-331,332-342 1jtd d1jtda_ A:27-41,41-52,53-61,241-252,256-265 1o07 d1o07b_ B:5-24,26-35,37-45,321-331,332-342 3c7u d3c7uc1 C:27-41,41-52,53-61,241-252,256-265 1ga9 d1ga9b_ B:5-24,27-35,37-44,321-331,332-342 1fcm d1fcma_ A:2-21,23-32,34-42,318-328,329-339 2bls d2blsb_ B:5-24,26-35,37-45,321-331,332-342 2bls d2blsa_ A:5-24,26-35,37-45,321-331,332-342 1u60 d1u60c_ C:3-21,41-48,50-57,263-271,273-281 3c7v d3c7vc1 C:28-41,41-52,53-61,241-252,256-265 1u60 d1u60a_ A:3-21,41-48,50-57,263-271,273-281 1jtg d1jtgc_ C:26-41,41-52,53-61,241-252,256-265 1u60 d1u60b_ B:3-21,41-48,50-57,263-271,273-281 1u60 d1u60d_ D:3-21,41-48,50-57,263-271,273-281 3c7u d3c7ua1 A:27-41,41-52,53-61,241-252,256-265 2g2u d2g2ua1 A:28-41,41-52,53-61,242-254,258-267 2g2w d2g2wa1 A:28-41,41-52,53-61,242-254,258-267 1fr1 d1fr1a_ A:4-24,26-35,37-45,321-331,332-342 3c4p d3c4pa1 A:28-41,41-52,53-61,242-254,258-267 3c7v d3c7va1 A:26-41,41-52,53-61,241-252,256-265 1jtg d1jtga_ A:26-41,41-52,53-61,241-252,256-265 1nrf d1nrfa_ A:363-371,372-382,383-390,549-561,562-574 1wyc d1wyca1 A:63-71,81-90,91-101,346-355,356-365 1i5q d1i5qb_ B:4-24,26-35,37-45,321-331,332-342 1wyb d1wyba1 A:63-71,81-90,91-101,346-355,356-365 2dcf d2dcfa1 A:63-71,81-90,91-101,346-355,356-365 1pio d1pioa_ A:32-41,42-52,53-61,242-253,258-267 1m6k d1m6kb_ B:21-30,34-46,47-55,224-236,238-250 1m6k d1m6ka_ A:21-30,34-46,47-55,224-236,238-250 1s6r d1s6ra_ A:4-24,26-35,37-45,321-331,332-342 1pio d1piob_ B:32-41,42-52,53-61,242-253,258-267 2b5r d2b5ra1 A:26-41,41-52,53-61,241-252,256-265 1s0w d1s0wb_ B:26-41,41-52,53-61,241-252,256-265 1k38 d1k38a_ A:23-34,36-45,51-55,211-222,223-234 1s0w d1s0wa_ A:26-41,41-52,53-61,241-252,256-265 1k38 d1k38b_ B:23-34,36-45,51-55,211-222,223-234 1ome d1omea_ A:32-41,41-52,53-61,242-253,258-268 2b5r d2b5rb1 B:26-41,42-52,53-61,241-252,256-265 1k6s d1k6sb_ B:25-36,38-47,48-54,215-229,230-240 1k4e d1k4ea_ A:25-36,38-47,48-54,215-229,230-240 1k4f d1k4fb_ B:25-36,38-47,48-54,215-229,230-240 1fof d1fofb_ B:25-36,38-47,48-54,215-229,230-240 1k4e d1k4eb_ B:25-36,38-47,48-54,215-229,230-240 1k6r d1k6rb_ B:25-36,38-47,48-54,215-229,230-240 1k6r d1k6ra_ A:25-36,38-46,49-54,215-229,230-240 1h8y d1h8yb_ B:25-36,38-46,50-54,216-229,230-240 1ewz d1ewzc_ C:25-36,38-46,50-54,215-229,230-240 1k57 d1k57a_ A:25-36,38-46,50-54,215-229,230-240 1k57 d1k57c_ C:25-36,38-46,50-54,215-229,230-240 3c4o d3c4oa1 A:28-41,43-52,53-61,241-254,258-269 1k57 d1k57d_ D:25-36,38-46,50-54,215-229,230-240 1ewz d1ewzd_ D:25-36,38-46,50-54,215-229,230-240 1h8z d1h8zb_ B:25-36,38-46,50-55,215-229,230-240 1k56 d1k56d_ D:25-36,38-46,50-54,215-229,230-240 1e4d d1e4da_ A:25-36,38-46,50-54,215-229,230-240 1k54 d1k54c_ C:25-36,38-46,50-54,215-229,230-240 1k55 d1k55a_ A:25-36,38-46,50-54,215-229,230-240 1k57 d1k57b_ B:25-36,38-46,50-54,215-229,230-240 1k55 d1k55c_ C:25-36,38-46,50-54,215-229,230-240 1k54 d1k54d_ D:25-36,38-46,50-54,215-229,230-240 1k55 d1k55b_ B:25-36,38-46,50-54,215-229,230-240 1e3u d1e3ud_ D:25-36,38-46,50-54,215-229,230-240 1h8z d1h8za_ A:25-36,38-46,50-54,215-229,230-240 1k54 d1k54b_ B:25-36,38-46,50-54,215-229,230-240 1k56 d1k56a_ A:25-36,38-46,50-54,215-229,230-240 1e3u d1e3uc_ C:25-36,38-46,50-54,215-229,230-240 1h5x d1h5xb_ B:25-36,38-46,50-55,215-229,230-240 1ewz d1ewza_ A:25-36,38-46,50-54,215-229,230-240 1k56 d1k56b_ B:25-36,38-46,50-54,215-229,230-240 1k56 d1k56c_ C:25-36,38-46,50-54,215-229,230-240 1k55 d1k55d_ D:25-36,38-46,50-54,215-229,230-240 1e4d d1e4db_ B:25-36,38-46,50-54,215-229,230-240 1e4d d1e4dd_ D:25-36,38-46,50-54,215-229,230-240 1e3u d1e3ua_ A:25-36,38-46,50-54,215-229,230-240 1h5x d1h5xa_ A:25-36,38-46,50-54,215-229,230-240 1e3u d1e3ub_ B:25-36,38-46,50-54,215-229,230-240 1k6s d1k6sa_ A:25-36,38-46,50-54,215-229,230-240 1ewz d1ewzb_ B:25-36,38-46,50-54,215-229,230-240 1k54 d1k54a_ A:25-36,38-46,50-54,215-229,230-240 1h8y d1h8ya_ A:25-36,38-46,50-54,215-229,230-240 1k4f d1k4fa_ A:25-36,38-46,50-54,215-229,230-240 1fof d1fofa_ A:25-36,38-46,50-54,215-229,230-240 3bls d3blsa_ A:5-24,26-35,37-49,321-331,332-342 1e4d d1e4dc_ C:25-36,38-46,50-54,215-229,230-240 3bls d3blsb_ B:5-24,26-35,37-49,321-331,332-342 1fcm d1fcmb_ B:2-21,23-32,34-46,318-328,329-339 1xgj d1xgjb1 B:5-24,26-35,37-49,321-331,332-342 1mxo d1mxob_ B:5-24,26-35,37-49,321-331,332-342 1fsw d1fswb_ B:5-24,26-35,37-49,321-331,332-342 1l0g d1l0gb_ B:5-24,26-35,37-49,321-331,332-342 1fco d1fcob_ B:2-21,23-32,34-46,318-328,329-339 1xgi d1xgib1 B:5-24,26-35,37-49,321-331,332-342 1fcn d1fcnb_ B:2-21,23-32,34-46,318-328,329-339 1c3b d1c3bb_ B:5-24,26-35,37-49,321-331,332-342 1ome d1omeb_ B:32-41,42-52,53-61,244-253,258-267 2. d.110.2 GAF domain-like alpha(2)-beta(3)-alpha-beta(3)-alpha; antiparallel beta-sheet: order 321654 ! Profilin-like core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha 1mkm d1mkmb2 B:81-93,93-103,104-115,193-204,206-218 3c2w d3c2wc1 C:139-156,158-167,169-179,257-267,268-279 1tf1 d1tf1b_ B:6-18,30-39,40-50,129-140,142-154 1tf1 d1tf1b_ B:17-29,30-39,40-50,129-140,142-154 3c2w d3c2wf1 F:139-156,158-167,169-179,257-267,268-279 2vea d2veaa1 A:152-169,171-180,182-192,270-280,281-292 1tf1 d1tf1a_ A:7-18,30-39,40-50,129-140,142-154 1tf1 d1tf1d_ D:7-18,30-39,40-50,129-140,142-154 3c2w d3c2wg1 G:139-156,158-167,169-179,257-267,268-279 1tf1 d1tf1a_ A:17-29,30-39,40-50,129-140,142-154 1tf1 d1tf1d_ D:17-29,30-39,40-50,129-140,142-154 2o9c d2o9ca1 A:152-169,171-180,182-192,270-280,281-292 2o9b d2o9ba1 A:152-169,171-180,182-192,270-280,281-292 3c2w d3c2wa1 A:139-156,158-167,169-179,257-267,268-279 1tf1 d1tf1c_ C:6-18,30-39,40-50,129-140,142-154 1tf1 d1tf1c_ C:17-29,30-39,40-50,129-140,142-154 3c2w d3c2wb1 B:139-156,158-167,169-179,257-267,268-279 1ztu d1ztua1 A:152-169,171-180,182-192,270-280,281-292 2ool d2oolb1 B:161-178,180-189,191-201,279-289,290-301 2o99 d2o99c1 C:11-23,24-33,36-46,125-136,138-150 3c2w d3c2we1 E:139-156,158-167,169-179,256-267,268-279 2ool d2oola1 A:161-178,180-189,191-201,279-289,290-301 3c2w d3c2wd1 D:139-156,158-167,169-179,257-267,268-279 3c2w d3c2wa2 A:334-341,353-360,361-367,409-419,420-429 1mkm d1mkma2 A:76-93,94-103,104-113,193-204,206-218 3c2w d3c2we2 E:334-341,353-360,361-367,409-419,420-429 2o9a d2o9ac1 C:4-23,24-32,37-46,125-136,138-150 3c2w d3c2wh1 H:139-156,158-167,169-179,257-267,268-279 3c2w d3c2wd2 D:334-341,353-360,361-367,409-419,420-429 3c2w d3c2wc2 C:334-341,353-360,361-367,409-419,420-429 3c2w d3c2wh2 H:334-341,353-360,361-367,409-419,420-429 3c2w d3c2wg2 G:334-341,353-360,361-367,409-419,420-429 2o9a d2o9ad1 D:4-23,24-33,36-46,125-136,138-150 3c2w d3c2wf2 F:334-341,353-360,361-367,409-419,420-429 3c2w d3c2wf2 F:344-351,353-360,361-367,409-419,420-429 1vhm d1vhmb_ B:41-58,60-70,71-80,123-133,134-145 1vhm d1vhma_ A:41-58,60-70,71-80,123-133,134-145 2o9a d2o9ab1 B:11-23,24-34,35-46,125-136,138-150 2o99 d2o99b1 B:11-23,24-34,35-46,125-136,138-150 1td5 d1td5b_ B:11-23,24-34,35-46,125-136,138-150 1td5 d1td5a_ A:11-23,24-34,35-46,125-136,138-150 1stz d1stzc2 C:115-132,133-139,230-235,286-297,298-310 1stz d1stza2 A:115-132,133-139,230-235,285-297,298-309 2o9a d2o9aa1 A:11-23,24-34,35-46,125-136,138-150 1stz d1stzb2 B:115-132,133-139,230-235,286-297,298-310 2o99 d2o99a1 A:11-23,24-34,35-46,125-136,138-150 1td5 d1td5d_ D:11-23,24-34,35-46,125-136,138-150 1td5 d1td5c_ C:11-23,24-34,35-46,125-136,138-150 2o99 d2o99d1 D:4-23,24-34,35-46,125-136,138-150 1mc0 d1mc0a2 A:402-419,421-430,431-439,493-503,505-517 2vea d2veaa2 A:347-356,366-373,374-381,424-431,435-442 2vea d2veaa2 A:355-364,366-373,374-381,424-431,435-442 1mc0 d1mc0a1 A:233-250,252-260,264-269,322-332,333-344 1f5m d1f5ma_ A:41-61,63-73,78-87,130-140,142-153 1f5m d1f5mb_ B:41-61,63-73,78-87,130-140,142-153 3. b.128.1 Hypothetical protein YojF Hypothetical protein YojF pseudobarrel; capped at one end by an alpha-helix 1njh d1njha_ A:5-17,20-30,41-53,90-100,101-111 4. d.53.1 Ribosomal protein S3 C-terminal domain Ribosomal protein S3 C-terminal domain alpha(2)-beta(4); 2 layers: alpha/beta; antiparallel beta-sheet: order 2143 2hgp d2hgpf2 F:129-145,147-156,163-172,181-190,195-204 2qal d2qalc2 C:128-144,145-155,162-170,180-191,192-203 2vho d2vhoc2 C:128-144,147-155,162-170,180-190,193-203 2qan d2qanc2 C:128-144,145-155,162-170,180-191,192-203 1yl4 d1yl4f2 F:129-145,147-156,163-171,181-192,193-204 2hhh d2hhhc2 C:129-145,147-156,163-172,181-192,193-204 2hgr d2hgrf2 F:129-145,146-156,163-171,181-191,194-204 1i95 d1i95c2 C:129-145,146-156,163-171,181-192,193-204 1hnw d1hnwc2 C:129-145,147-156,163-171,181-192,193-204 1xmq d1xmqc2 C:129-145,147-156,163-172,181-192,193-204 1hnx d1hnxc2 C:129-145,147-156,163-172,181-192,193-204 1i96 d1i96c2 C:129-145,146-156,163-171,181-192,193-204 1hnz d1hnzc2 C:129-145,147-156,163-171,181-192,193-204 1fjg d1fjgc2 C:129-145,147-156,163-172,181-192,193-204 2qou d2qouc2 C:128-144,146-155,162-170,179-191,192-204 2i2p d2i2pc2 C:128-144,146-155,162-170,181-191,192-203 2avy d2avyc2 C:128-144,145-154,163-170,180-191,192-203 1i94 d1i94c2 C:129-145,147-156,163-172,181-192,193-204 2e5l d2e5lc2 C:129-145,147-156,163-171,181-192,193-204 2hgi d2hgif2 F:129-145,146-156,163-172,181-192,193-204 2f4v d2f4vc2 C:129-145,147-156,163-171,181-192,193-204 1vs5 d1vs5c2 C:128-144,145-155,162-169,180-191,192-203 2vhp d2vhpc2 C:128-144,145-155,162-171,180-191,192-203 1xmo d1xmoc2 C:129-145,147-156,163-172,181-192,193-204 1n33 d1n33c2 C:129-145,147-156,163-172,181-192,193-204 1j5e d1j5ec2 C:129-145,147-156,163-171,181-192,193-204 1i97 d1i97c2 C:129-145,147-156,163-171,181-192,193-204 1xnq d1xnqc2 C:129-145,147-156,163-172,181-192,193-204 2z4k d2z4kc2 C:128-144,145-155,162-171,179-191,192-205 1n32 d1n32c2 C:129-145,147-156,163-171,181-192,193-204 2z4m d2z4mc2 C:128-144,145-155,162-171,179-191,192-205 2ow8 d2ow8d2 D:129-145,147-155,164-171,181-192,193-204 2qp0 d2qp0c2 C:128-144,146-155,162-170,179-191,192-205 1n36 d1n36c2 C:129-145,147-156,163-171,181-192,193-204 2qoy d2qoyc2 C:128-144,146-155,162-170,179-191,192-204 2uxc d2uxcc2 C:129-145,147-156,163-172,180-192,193-206 2uu9 d2uu9c2 C:129-145,147-156,163-171,180-192,193-206 2qbd d2qbdc2 C:128-144,146-155,162-171,179-191,192-205 2qbh d2qbhc2 C:128-144,145-155,162-170,179-191,192-205 2qow d2qowc2 C:128-144,145-154,163-171,179-191,192-205 2qbf d2qbfc2 C:128-144,146-155,162-171,179-191,192-205 2qbj d2qbjc2 C:128-144,145-155,162-170,179-191,192-205 2uuc d2uucc2 C:129-145,147-156,163-172,180-192,193-206 1vs7 d1vs7c2 C:128-144,146-155,162-171,179-191,192-204 1xnr d1xnrc2 C:129-145,147-156,163-171,180-192,193-206 2qbb d2qbbc2 C:128-144,146-155,162-170,179-191,192-205 2uub d2uubc2 C:129-145,147-156,163-172,180-192,193-206 2qb9 d2qb9c2 C:128-144,146-155,162-170,179-191,192-205 2uua d2uuac2 C:129-145,147-156,163-172,180-192,193-206 3df1 d3df1c2 C:128-144,145-154,164-171,179-191,192-205 3df3 d3df3c2 C:128-144,145-154,164-171,179-191,192-205 2aw7 d2aw7c2 C:128-144,146-155,162-170,179-191,192-205 2b9o d2b9oc2 C:129-145,147-156,163-171,180-192,193-206 2b64 d2b64c2 C:129-145,147-156,163-171,180-192,193-206 2b9m d2b9mc2 C:129-145,147-156,163-171,180-192,193-206 1hr0 d1hr0c2 C:129-145,147-156,163-171,179-192,193-207 2j00 d2j00c2 C:129-145,147-156,163-171,179-192,193-207 2j02 d2j02c2 C:129-145,147-156,163-171,179-192,193-207 1n34 d1n34c2 C:129-145,147-156,163-171,179-192,193-207 2i2u d2i2uc2 C:128-144,145-155,162-167,178-191,192-206 5. d.110.5 Pheromone-binding domain of LuxR-like quorum-sensing transcription factors alpha(2)-beta(2)-alpha(2)-beta(3)-alpha; possibly related to the PAS domain ! Profilin-like core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha 1h0m d1h0mc2 C:17-33,34-44,45-52,111-121,123-133 1h0m d1h0mb2 B:17-33,34-44,45-52,111-121,123-133 1h0m d1h0ma2 A:17-33,34-44,45-52,111-121,123-133 1l3l d1l3lc2 C:17-33,35-44,45-52,111-121,123-133 1l3l d1l3ld2 D:17-33,35-44,45-52,111-121,123-133 1h0m d1h0md2 D:17-33,34-44,45-52,111-121,123-133 1l3l d1l3la2 A:17-33,34-44,45-52,111-121,123-133 1l3l d1l3lb2 B:17-33,34-44,45-52,111-121,123-133 7. e.62.1 Heme iron utilization protein-like Heme iron utilization protein-like 2 domains; d1 - 3-helical bundle similar to the homeodomain-like fold; d2 - 6-stranded beta-barrel capped by two helices at one end, similar topology to the PH-like fold 2j0r d2j0ra1 A:225-240,241-250,251-259,298-309,311-320 1u9t d1u9ta1 A:222-237,239-247,248-256,295-306,308-317 2j0p d2j0pa1 A:225-240,242-250,251-259,298-309,311-320 1u9t d1u9ta1 A:48-60,61-69,70-78,120-129,131-139 2hq2 d2hq2a1 A:222-237,239-247,248-256,295-306,308-317 2hq2 d2hq2a1 A:48-60,61-69,70-78,118-129,131-139 2j0r d2j0ra1 A:50-62,63-71,72-80,120-131,133-141 2j0p d2j0pa1 A:50-62,62-71,72-80,120-131,133-141 2hqv d2hqva1 A:71-83,83-92,93-101,141-152,154-162 9. d.110.1 Profilin (actin-binding protein) alpha-beta(2)-alpha-beta(5)-alpha ! Profilin-like core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha 1hlu d1hlup_ P:1-14,15-25,27-34,97-106,107-115 1cjf d1cjfb_ B:2-14,15-25,27-34,97-106,107-115 1cf0 d1cf0b_ B:2-14,15-25,27-34,97-106,107-115 2pav d2pavp1 P:2-14,15-25,27-34,97-106,107-115 2btf d2btfp_ P:1-14,15-25,27-34,97-106,107-115 1cf0 d1cf0a_ A:2-14,15-25,27-34,98-106,107-115 3chw d3chwp1 P:2-14,15-25,27-34,97-106,107-115 1awi d1awia_ A:2-14,15-25,27-34,98-106,107-115 1awi d1awib_ B:2-14,15-25,27-34,97-106,107-115 1d1j d1d1jb_ B:2-14,15-25,27-34,97-106,107-115 2pbd d2pbdp1 P:2-14,15-25,27-34,97-106,107-115 1cjf d1cjfa_ A:2-14,15-25,27-34,94-106,107-115 1d1j d1d1ja_ A:2-14,15-25,27-34,97-106,107-115 1ypr d1ypra_ A:1-13,15-23,27-33,83-92,93-102 1ypr d1yprb_ B:1-13,15-23,27-33,83-92,93-102 1f2k d1f2kb_ B:2001-2014,2017-2024,2026-2032,2083-2092,2093-2102 1d1j d1d1jd_ D:2-14,15-25,27-34,94-106,107-115 1f2k d1f2ka_ A:1001-1014,1017-1024,1026-1032,1083-1092,1093-1102 1d1j d1d1jc_ C:2-14,15-25,27-34,94-106,107-115 1g5u d1g5ua_ A:1002-1013,1021-1028,1030-1036,1089-1098,1099-1108 1g5u d1g5ub_ B:2002-2013,2021-2028,2030-2036,2089-2098,2099-2108 2prf d2prfa_ A:1-9,17-22,28-33,83-92,93-102 10. d.110.7 Roadblock/LC7 domain alpha-beta(2)-alpha-beta(3)-alpha; structurally most similar to the SNARE-like superfamily with a circular permutation of the terminal helices ! Profilin-like core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha 2zl1 d2zl1b1 B:3-16,18-27,29-37,78-87,88-97 1sko d1skob_ B:3-15,17-26,28-36,77-86,87-96 1vet d1vetb_ B:3-16,18-27,29-37,78-87,88-97 1veu d1veua_ A:3-17,18-27,29-37,77-85,88-96 1veu d1veub_ B:3-16,18-27,29-36,78-87,88-97 3cpt d3cpta1 A:3-17,18-27,29-37,77-85,88-96 1vet d1veta_ A:3-17,18-27,29-37,77-85,88-96 2b95 d2b95a1 A:11-25,26-35,37-44,85-94,95-103 1j3w d1j3wb_ B:9-28,29-37,39-47,91-100,102-111 1j3w d1j3wc_ C:9-28,29-37,39-47,91-100,102-111 2e8j d2e8ja1 A:1-15,18-25,27-34,75-84,85-93 1j3w d1j3wa_ A:9-28,29-37,39-47,91-100,102-111 1j3w d1j3wd_ D:9-28,29-37,39-47,91-100,102-111 2e8j d2e8jb1 B:1-15,18-25,27-34,75-84,85-93 1z09 d1z09b1 B:97-109,112-121,124-130,171-180,181-189 1z09 d1z09a1 A:1-13,16-25,28-34,75-84,85-93 2b95 d2b95b1 B:11-25,26-35,37-43,85-94,95-103 1szv d1szva1 A:6-14,19-27,29-35,79-87,89-96 1sko d1skoa_ A:1-18,19-28,30-38,78-86,88-97 1y4o d1y4oa1 A:7-23,24-33,35-39,83-92,93-101 2hz5 d2hz5a1 A:5-14,16-25,27-33,75-82,86-94 1y4o d1y4ob1 B:207-223,224-233,235-239,284-291,293-301 12. d.110.10 YNR034W-A-like Profilin-like core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha 2grg d2grga1 A:6-15,14-22,24-31,64-73,74-82 15. d.110.9 GlcG-like alpha-beta(2)-alpha(3)-beta(2)-alpha; similar to the Roadblock/LC7 domain ! Profilin-like core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha 2a2l d2a2lc1 C:14-33,36-43,45-53,107-114,115-125 2a2l d2a2la1 A:14-33,36-43,45-53,107-114,115-125 2a2l d2a2lb1 B:14-33,36-43,45-53,107-114,115-125 2a2l d2a2ld1 D:14-33,36-43,45-53,107-114,115-125 16. d.110.6 Sensory domain-like alpha(2)-beta(2)-alpha(2)-beta(3); possibly related to the PAS domain ! Profilin-like core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha 2hje d2hjea1 A:195-207,209-216,217-223,248-255,263-271 2p7j d2p7ja2 A:57-76,77-86,88-99,148-160,161-172 2hj9 d2hj9d1 D:195-207,209-216,217-223,249-255,263-270 2p7j d2p7jb2 B:57-76,77-86,88-99,148-160,161-172 1zhh d1zhhb1 B:92-108,113-120,121-127,162-178,179-192 2hje d2hjea1 A:92-108,113-120,121-127,162-178,179-192 2hj9 d2hj9d1 D:92-108,113-120,121-127,162-178,179-192 2hj9 d2hj9c1 C:195-207,209-216,217-223,249-255,263-270 1zhh d1zhhb1 B:195-207,209-216,217-223,250-255,263-270 2hj9 d2hj9c1 C:92-108,113-120,121-127,162-178,179-192 3by8 d3by8a1 A:80-94,95-103,105-110,144-155,157-168 2v9a d2v9ab1 B:37-53,55-62,64-68,103-115,117-128 1p0z d1p0zi_ I:37-53,55-62,64-69,103-115,117-129 1p0z d1p0zd_ D:37-53,55-62,64-69,103-115,117-129 1p0z d1p0zj_ J:37-53,55-62,64-69,103-115,117-129 1p0z d1p0zb_ B:37-53,55-62,64-69,103-115,117-129 1p0z d1p0zf_ F:37-53,55-62,64-69,103-115,117-129 1p0z d1p0za_ A:37-53,55-62,64-69,103-115,117-129 1p0z d1p0zh_ H:37-53,55-62,64-69,103-115,117-129 1p0z d1p0ze_ E:37-53,55-62,64-69,103-115,117-129 1p0z d1p0zc_ C:37-53,55-62,64-69,103-115,117-129 1p0z d1p0zg_ G:37-53,55-62,64-69,103-115,117-129 2j80 d2j80a1 A:37-53,55-62,64-69,103-115,117-129 2j80 d2j80b1 B:37-53,55-62,64-69,103-115,117-129 2p7j d2p7ja1 A:173-182,190-195,197-202,244-253,259-267 2p7j d2p7jb1 B:173-182,190-195,197-202,244-253,259-267 2bas d2basa2 A:293-306,309-317,324-330,375-386,388-396 2bas d2basb2 B:293-306,310-317,324-330,374-386,388-397 17. d.22.1 GFP-like GFP-like beta-sheet folds into a barrel (n=11, S=14) around the central helix 2rh7 d2rh7d1 D:57-65,90-100,102-114,155-168,170-184 1eml d1emla_ A:56-64,91-101,103-116,159-172,174-188 2rh7 d2rh7c1 C:57-65,90-100,102-114,155-168,170-184 2rh7 d2rh7a1 A:57-65,90-100,102-114,155-168,170-184 1g7k d1g7ka_ A:57-65,90-100,102-115,155-168,170-184 1uis d1uisa_ A:54-62,87-97,99-112,152-165,167-181 2rh7 d2rh7b1 B:57-65,90-100,102-115,155-168,170-184 1uis d1uisb_ B:54-62,87-97,99-112,152-165,167-181 1ggx d1ggxb_ B:57-65,90-100,102-115,155-168,170-184 1g7k d1g7kb_ B:57-65,90-100,102-115,155-168,170-184 1mov d1mova_ A:57-65,90-100,102-115,155-168,170-184 1g7k d1g7kd_ D:57-65,90-100,102-115,155-168,170-184 1ggx d1ggxa_ A:57-65,90-100,102-115,155-168,170-184 1jby d1jbya_ A:56-64,91-101,103-116,159-172,174-188 1xqm d1xqma_ A:54-62,87-97,99-112,152-165,167-181 1g7k d1g7kc_ C:57-65,90-100,102-115,155-168,170-184 1mou d1moua_ A:57-65,90-100,102-115,155-168,170-184 1f0b d1f0ba_ A:56-64,91-101,103-116,159-172,174-188 1cv7 d1cv7a_ A:56-64,90-101,103-116,159-172,174-189 1f09 d1f09a_ A:56-64,90-101,103-116,159-172,174-189 1emb d1emba_ A:56-64,90-101,103-116,159-172,174-189 1b9c d1b9cb_ B:56-64,89-101,103-116,159-172,174-189 1ema d1emaa_ A:56-64,90-101,103-116,159-172,174-189 1qyf d1qyfa_ A:56-64,89-101,103-116,159-172,174-189 2yfp d2yfpa_ A:56-64,90-101,103-116,159-172,174-189 1kyp d1kypa_ A:56-64,89-101,103-116,159-172,174-189 1jc0 d1jc0b_ B:56-64,89-101,103-116,159-172,174-189 1b9c d1b9cc_ C:56-64,89-101,103-116,159-172,174-189 1jc0 d1jc0a_ A:56-64,89-101,103-116,159-172,174-189 1b9c d1b9cd_ D:56-64,89-101,103-116,159-172,174-189 1gfl d1gflb_ B:56-69,89-101,103-116,159-172,174-189 1jc1 d1jc1a_ A:56-64,89-101,103-116,159-172,174-189 1hcj d1hcjc_ C:56-64,89-101,103-116,159-172,174-189 1hcj d1hcjd_ D:56-64,89-101,103-116,159-172,174-189 1hcj d1hcja_ A:56-64,89-101,103-116,159-172,174-189 1kyr d1kyra_ A:56-64,89-101,103-116,159-172,174-189 1oxd d1oxda_ A:56-64,89-101,103-116,159-172,174-189 1oxe d1oxea_ A:56-64,89-101,103-116,159-172,174-189 1jc1 d1jc1b_ B:56-64,89-101,103-116,159-172,174-189 1gfl d1gfla_ A:56-69,89-101,103-116,159-172,174-189 1q4e d1q4ea_ A:56-64,89-101,103-116,159-172,174-189 1jbz d1jbza_ A:56-64,89-101,103-116,159-172,174-189 1s6z d1s6za_ A:56-64,89-101,103-116,159-172,174-189 1q4c d1q4ca_ A:56-64,89-101,103-116,159-172,174-189 1q73 d1q73a_ A:56-64,89-101,103-116,159-172,174-189 1q4a d1q4aa_ A:56-64,89-101,103-116,159-172,174-189 1emg d1emga_ A:56-64,89-101,103-116,159-172,174-189 1emf d1emfa_ A:56-64,89-101,103-116,159-172,174-189 1q4d d1q4da_ A:56-64,89-101,103-116,159-172,174-189 1qyq d1qyqa_ A:56-64,89-101,103-116,159-172,174-189 1emc d1emcc_ C:56-64,89-101,103-116,159-172,174-189 1jc0 d1jc0c_ C:56-64,89-101,103-116,159-172,174-189 1q4b d1q4ba_ A:56-64,89-101,103-116,159-172,174-189 1emc d1emcd_ D:56-64,89-101,103-116,159-172,174-189 1emc d1emcb_ B:56-64,89-101,103-116,159-172,174-189 1c4f d1c4fa_ A:56-64,89-101,103-116,159-172,174-189 1bfp d1bfpa_ A:56-64,89-101,103-116,158-172,174-189 1qxt d1qxta_ A:56-69,89-101,103-116,159-172,174-188 1rrx d1rrxa_ A:56-64,97-101,103-116,164-172,174-189 1qy3 d1qy3a_ A:56-69,89-101,103-116,159-172,174-188 1b9c d1b9ca_ A:56-64,89-101,103-116,159-172,174-188 1kys d1kysa_ A:56-64,89-101,103-116,159-172,174-188 1kp5 d1kp5b_ B:366-374,399-411,413-426,469-482,484-498 2emn d2emna_ A:56-64,89-101,103-116,159-172,174-188 1qyo d1qyoa_ A:56-69,89-101,103-116,159-172,174-188 1hcj d1hcjb_ B:56-64,89-101,103-116,159-172,174-188 1jc1 d1jc1c_ C:56-64,89-101,103-116,159-172,174-188 1kp5 d1kp5a_ A:66-74,99-111,113-126,169-182,184-198 1yfp d1yfpb_ B:56-64,89-101,103-116,159-172,174-188 1yfp d1yfpa_ A:56-64,89-101,103-116,159-172,174-188 1eme d1emea_ A:56-64,89-101,103-116,159-172,174-188 1h6r d1h6rb_ B:56-64,89-101,103-116,159-172,174-188 1emk d1emka_ A:56-64,89-101,103-116,159-172,174-188 1h6r d1h6ra_ A:56-64,89-101,103-116,159-172,174-188 1emc d1emca_ A:56-64,89-101,103-116,159-172,174-188 1myw d1mywa_ A:56-64,89-101,103-116,159-172,174-188 1emm d1emma_ A:56-64,89-101,103-116,159-172,174-188 2emd d2emda_ A:56-64,89-101,103-116,159-172,174-188 1huy d1huya_ A:56-64,89-101,103-116,159-172,174-188 1h6r d1h6rc_ C:56-64,89-101,103-116,159-172,174-188 1gl4 d1gl4a1 A:457-469,484-495,500-512,549-564,572-585 1ggx d1ggxc_ C:57-65,88-100,102-115,155-168,170-184 2emo d2emoa_ A:56-64,89-101,103-116,159-172,174-188 1ggx d1ggxd_ D:57-65,88-100,102-115,155-168,170-184 1h4u d1h4ua1 A:457-469,484-495,500-512,549-564,571-585 18. d.109.3 FLJ32549 C-terminal domain-like alpha-beta(2)-alpha-beta(3)-alpha; similar to the Roadblock/LC7 domain Gelsolin-like 3 layers: a/b/a; contains mixed beta-sheet 2gnx d2gnxa2 A:296-309,310-318,346-352,389-398,401-410 22. d.172.1 gp120 core gp120 core unusual fold 2ny4 d2ny4a1 A:98-117,119-126,196-205,422-426,431-435 2ny0 d2ny0a1 A:98-117,119-126,196-205,422-426,431-435 2nxz d2nxza1 A:98-117,119-126,196-205,422-426,431-435 2ny2 d2ny2a1 A:98-117,119-126,196-203,422-426,431-435 2nxy d2nxya1 A:98-117,119-126,196-205,422-426,431-435 2ny5 d2ny5g1 G:98-117,119-126,196-203,422-426,431-435 2ny6 d2ny6a1 A:98-117,119-126,196-205,422-426,431-435 1gc1 d1gc1g_ G:98-117,118-126,196-203,422-426,431-435 2ny1 d2ny1a1 A:98-117,118-126,196-203,422-426,431-435 2ny3 d2ny3a1 A:98-117,118-126,196-203,422-426,431-435 2i5y d2i5yp1 P:98-117,118-127,195-203,422-426,431-435 1yyl d1yylg1 G:98-117,118-128,194-203,422-426,431-435 1rzk d1rzkg_ G:98-117,118-126,196-203,422-426,431-435 2i60 d2i60p1 P:98-117,119-128,194-203,422-426,431-435 1rzj d1rzjg_ G:98-117,118-126,196-203,422-426,431-435 1g9n d1g9ng_ G:98-117,118-126,196-203,422-426,431-435 1g9m d1g9mg_ G:98-117,118-126,196-203,422-426,431-435 1yym d1yymg1 G:98-117,118-128,194-203,422-426,431-435 1yym d1yymp1 P:1098-1117,1118-1128,1194-1203,1422-1426,1431-1435 2i60 d2i60g1 G:98-117,118-128,194-203,422-426,431-435 1yyl d1yylp1 P:1098-1117,1118-1128,1194-1203,1422-1426,1431-1435 2i5y d2i5yg1 G:98-117,119-128,194-205,422-426,431-435 25. e.73.1 CV3147-like CV3147-like 2 domains; d1: [alpha/beta; 3 layers, a/b/a, mixed beta-sheet of 8 strands, order 12543876, strands 1, 7 and 8 are antiparallel to the rest]; d2: [pseudo beta-barrel of 6 strands, meander] 2o3i d2o3ib1 B:243-256,259-269,282-289,317-325,352-360 2o3i d2o3ia1 A:243-256,259-269,282-289,317-325,352-360 27. b.43.2 FucI/AraA C-terminal domain-like Reductase/isomerase/elongation factor common domain barrel, closed; n=6, S=10; greek-key 2hxg d2hxgc1 C:308-323,331-341,342-349,388-400,449-456 2ajt d2ajtc1 C:308-323,331-341,342-349,389-400,449-456 2hxg d2hxga1 A:308-323,331-341,342-349,388-400,449-456 2ajt d2ajta1 A:308-323,331-341,342-349,389-400,449-456 2ajt d2ajtb1 B:308-323,331-341,342-349,389-400,449-456 2hxg d2hxgb1 B:308-323,331-341,342-349,389-400,449-456 1fui d1fuid1 D:311-322,357-367,386-392,454-466,527-534 1fui d1fuid1 D:339-354,357-367,386-392,454-466,527-534 1fui d1fuic1 C:311-322,357-367,386-392,454-467,527-534 1fui d1fuic1 C:339-354,357-367,386-392,454-467,527-534 1fui d1fuib1 B:311-322,357-367,386-392,455-467,527-534 1fui d1fuib1 B:339-354,357-367,386-392,455-467,527-534 1fui d1fuie1 E:311-322,357-367,386-392,454-467,527-534 1fui d1fuia1 A:311-322,357-367,386-392,454-467,527-534 1fui d1fuie1 E:339-354,357-367,386-392,454-467,527-534 1fui d1fuia1 A:339-354,357-367,386-392,454-467,527-534 1fui d1fuif1 F:311-322,357-367,386-392,454-467,527-534 1fui d1fuif1 F:339-354,357-367,386-392,454-467,527-534 29. f.4.5 Autotransporter forms (12,14) barrel; contains a long alpha-helix running along the barrel axis ! Transmembrane beta-barrels not a true fold, gathers together transmembrane barrels of different (n,S) 1uyn d1uynx_ X:787-815,818-835,836-855,1056-1069,1070-1084 1uyo d1uyox_ X:785-814,818-833,838-854,1056-1069,1070-1084 32. b.44.2 Aminomethyltransferase beta-barrel domain Elongation factor/aminomethyltransferase common domain barrel, closed; n=6, S=10; greek-key 1woo d1wooa1 A:223-235,278-287,318-328,332-341,343-351 1wos d1wosa1 A:223-235,278-287,318-328,332-341,343-351 1wop d1wopa1 A:223-235,278-287,318-328,332-341,343-351 1pj5 d1pj5a1 A:686-698,743-752,783-794,798-807,808-816 1pj7 d1pj7a1 A:686-698,743-752,783-794,798-807,808-816 1wor d1wora1 A:223-235,278-287,318-328,334-341,343-351 1pj6 d1pj6a1 A:686-698,743-752,783-794,800-807,808-816