1. c.91.1 PEP carboxykinase-like
PEP carboxykinase-like contains a P-loop NTP-binding motif; mixed beta-sheet folds into a barrel-like structure with helices packed on one side
1khg d1khga1 A:429-435,443-447,509-515,549-554,555-560
2pc9 d2pc9c1 C:340-348,355-359,419-427,460-465,468-473
2pc9 d2pc9b1 B:340-348,355-359,419-427,460-465,468-473
2pc9 d2pc9d1 D:340-349,355-359,419-427,459-466,467-474
2gmv d2gmvb1 B:429-435,443-447,509-515,550-554,555-559
1j3b d1j3bb1 B:340-349,355-359,419-427,459-466,467-474
1os1 d1os1a1 A:355-363,370-374,434-442,471-477,478-484
2pc9 d2pc9a1 A:340-349,355-359,419-427,459-466,467-474
1j3b d1j3ba1 A:340-349,355-359,419-427,459-466,467-474
1xkv d1xkvb1 B:340-349,355-359,419-427,460-466,467-473
1aq2 d1aq2a1 A:355-364,370-374,434-442,471-477,478-484
1k3c d1k3ca1 A:355-364,370-374,434-442,471-477,478-484
2olq d2olqa1 A:355-364,370-374,434-442,471-477,478-484
2pxz d2pxzx1 X:355-364,370-374,434-442,471-477,478-484
2py7 d2py7x1 X:355-364,370-374,434-442,471-477,478-484
1k3d d1k3da1 A:355-364,370-374,434-442,471-477,478-484
2olr d2olra1 A:355-364,370-374,434-442,471-477,478-484
1xkv d1xkva1 A:340-349,355-359,419-427,460-466,467-473
1ayl d1ayla1 A:355-364,370-374,434-442,471-477,478-484
1ii2 d1ii2b1 B:328-337,343-347,408-416,450-456,457-463
1ii2 d1ii2a1 A:328-337,343-347,408-416,450-456,457-463
1khe d1khea1 A:429-438,443-447,509-521,549-554,555-560
1khb d1khba1 A:429-438,443-447,509-521,549-554,555-560
1khf d1khfa1 A:429-438,443-447,509-521,549-554,555-560
1nhx d1nhxa1 A:429-438,443-447,509-521,549-554,555-560
1oen d1oena1 A:355-365,370-374,434-444,471-477,478-484
2gmv d2gmva1 A:429-438,443-447,509-521,550-554,555-559
1m51 d1m51a1 A:429-438,443-447,509-521,549-554,555-560
2. e.3.1 beta-lactamase/transpeptidase-like
beta-lactamase/transpeptidase-like contains a cluster of helices and an alpha+beta sandwich
1xa1 d1xa1c_ C:16-20,29-39,40-47,207-218,219-231
1xa7 d1xa7b_ B:16-20,31-38,41-47,204-218,219-229
1xa1 d1xa1b_ B:16-20,29-39,40-47,204-218,219-231
1xkz d1xkzd_ D:346-350,359-369,370-377,534-548,549-561
1xkz d1xkzb_ B:346-350,359-369,370-377,534-548,549-561
1xkz d1xkza_ A:346-350,359-369,370-377,534-548,549-561
1h8y d1h8yb_ B:21-25,38-46,50-54,216-229,230-240
1nrf d1nrfa_ A:356-361,372-382,383-390,549-561,562-574
1k55 d1k55c_ C:21-25,38-46,50-54,215-229,230-240
1k56 d1k56d_ D:21-25,38-46,50-54,215-229,230-240
1k54 d1k54b_ B:21-25,38-46,50-54,215-229,230-240
1k55 d1k55b_ B:21-25,38-46,50-54,215-229,230-240
1k54 d1k54d_ D:21-25,38-46,50-54,215-229,230-240
1k4e d1k4ea_ A:20-25,38-47,48-54,215-229,230-240
1k56 d1k56b_ B:21-25,38-46,50-54,215-229,230-240
1k55 d1k55a_ A:21-25,38-46,50-54,215-229,230-240
1k6s d1k6sb_ B:20-25,38-47,48-54,215-229,230-240
1k56 d1k56c_ C:21-25,38-46,50-54,215-229,230-240
1k57 d1k57b_ B:21-25,38-46,50-54,215-229,230-240
1e4d d1e4db_ B:21-25,38-46,50-54,215-229,230-240
1e4d d1e4dd_ D:21-25,38-46,50-54,215-229,230-240
1k4e d1k4eb_ B:20-25,38-47,48-54,215-229,230-240
1k4f d1k4fb_ B:20-25,38-47,48-54,215-229,230-240
1h8y d1h8ya_ A:21-25,38-46,50-54,215-229,230-240
1fof d1fofb_ B:20-25,38-47,48-54,215-229,230-240
1k6r d1k6rb_ B:20-25,38-47,48-54,215-229,230-240
1e4d d1e4dc_ C:21-25,38-46,50-54,215-229,230-240
1k6s d1k6sa_ A:21-25,38-46,50-54,215-229,230-240
1fof d1fofa_ A:21-25,38-46,50-54,215-229,230-240
1k6r d1k6ra_ A:20-25,38-46,49-54,215-229,230-240
1k4f d1k4fa_ A:21-25,38-46,50-54,215-229,230-240
3. b.61.2 beta-Barrel protease inhibitors
Streptavidin-like barrel, closed; n=8, S=10; meander
1pxv d1pxvd_ D:2-10,28-35,36-45,85-94,102-108
1nyc d1nyca_ A:1-10,29-35,36-45,85-94,99-108
1pxv d1pxvc_ C:2-10,28-35,36-45,85-94,99-108
1y4h d1y4hc1 C:2-10,28-35,36-45,85-94,98-108
1qwx d1qwxb_ B:1-10,28-35,36-45,85-94,99-108
1y4h d1y4hd1 D:2-10,28-35,36-45,85-94,98-108
4. e.17.1 D-aminoacid aminotransferase-like PLP-dependent enzymes
D-aminoacid aminotransferase-like PLP-dependent enzymes 2 domains: (1) alpha+beta: beta3-alpha2-beta2; (2) alpha/beta, a part of its mixed sheet forms barrel: n=6, S=8
1ekv d1ekva_ A:9-13,36-45,47-56,137-149,159-172
2hhf d2hhfa1 A:9-13,36-45,46-56,137-149,159-172
1ekv d1ekvb_ B:9-13,36-45,47-56,137-150,159-172
1kta d1ktab_ B:509-513,536-545,547-556,637-650,659-672
1kt8 d1kt8a_ A:9-13,36-45,47-56,137-150,159-172
1ekp d1ekpb_ B:9-13,36-45,50-56,137-150,159-172
1kt8 d1kt8b_ B:509-513,536-545,547-556,637-650,659-672
1ekf d1ekfa_ A:9-13,36-45,50-56,137-150,159-172
2a1h d2a1ha1 A:9-13,36-45,50-56,137-150,159-172
2a1h d2a1hb1 B:9-13,36-45,50-56,137-150,159-172
1ekp d1ekpa_ A:9-13,36-45,50-56,137-150,159-172
1ekf d1ekfb_ B:9-13,36-45,50-56,137-150,159-172
2hhf d2hhfb1 B:509-513,536-545,550-556,637-650,659-672
5. e.61.1 ImpE-like
ImpE-like consists of two domains; d1: right-handed superhelix of five helices; d2: pseudo beta-barrel containing structurally similar part to the "Histone-like" proteins from archaea (scop_fa 54161)
1zbp d1zbpa1 A:90-94,154-161,163-170,188-197,200-208
List of motif hits that are not present in SCOP but are found in PDB for pattern ID: 290 (enumeration index: query2108) of S5
3t81 A:407-417,440-447,455-463,469-475,479-487
3t81 B:413-417,440-447,454-463,469-475,480-487
2coi B:29-33,55-64,70-76,158-170,179-191
2coi A:29-33,55-64,70-76,158-170,179-191
3qnc A:20-25,38-46,49-54,218-229,230-241
3qnc B:20-25,38-47,48-54,218-229,230-241
2wgi A:21-25,38-46,50-54,215-229,230-240
2wgi B:20-25,38-47,48-54,215-229,230-240
2qew A:429-438,443-447,509-521,549-554,555-560
2rk7 B:429-438,443-447,509-521,549-554,555-560
2rk7 A:429-438,443-447,509-521,549-554,555-560
3qnb A:21-25,38-46,50-54,218-229,230-241
3qnb C:21-25,38-46,50-54,218-229,230-241
3qnb B:21-25,38-46,50-54,218-229,230-241
2abj J:27-31,53-62,68-74,155-168,177-190
2abj G:27-31,53-62,68-74,156-168,177-189
2abj D:27-31,53-62,68-74,156-168,177-189
2abj A:27-31,53-62,68-74,155-168,177-190
1ytm A:349-358,364-368,428-436,465-471,472-478
1ytm B:1349-1358,1364-1368,1428-1436,1465-1471,1472-1478
2qey A:429-434,443-447,509-515,549-554,555-560
2hp6 B:20-25,38-47,48-54,215-229,230-240
2hp6 A:21-25,38-46,50-54,215-229,230-240
2hgx A:9-13,36-45,50-56,138-150,159-171
2hgx B:509-513,536-545,550-556,637-650,659-672
2hg8 A:9-13,36-45,50-56,138-150,159-171
2hg8 B:509-513,536-545,550-556,637-650,659-672
2hgw B:509-513,536-545,550-556,637-650,659-672
2hgw A:9-13,36-45,50-56,138-150,159-171
3cgu B:101-105,119-128,130-136,270-275,276-281
3cgu A:101-105,119-128,130-136,270-275,276-281
3dt4 C:429-435,443-447,509-515,549-554,555-560
3dt4 A:429-435,443-447,509-515,549-554,555-560
3mof A:429-435,443-447,509-515,549-554,555-560
3mof B:429-438,443-447,509-521,549-554,555-560
3c9a A:100-105,119-128,130-136,270-275,276-281
3c9a B:100-105,119-127,131-136,270-275,276-281
2cog A:29-33,55-64,70-76,158-170,179-191
2cog B:29-33,55-64,67-76,158-170,179-191
2rk8 A:429-434,443-447,509-515,549-554,555-560
2rk8 B:429-438,443-447,509-521,549-554,555-560
2wki B:20-25,38-47,48-54,215-229,230-240
2wki A:21-25,38-46,50-54,215-229,230-240
3moe A:429-434,443-447,509-515,549-554,555-560
3t8l B:407-416,439-447,456-463,469-475,480-487
3t8l A:407-417,440-447,455-463,469-475,480-487
2zci C:413-419,427-431,494-500,534-538,541-545
2hp5 B:21-25,38-46,50-54,215-229,230-240
2hp5 C:20-25,38-47,48-54,215-229,230-240
2hp5 D:21-25,38-46,50-54,215-229,230-240
2hp5 A:20-25,38-46,49-54,215-229,230-240
3q7z A:346-350,359-369,370-377,534-548,549-561
3q7z B:346-350,359-369,370-377,534-548,549-561
2x02 A:21-25,38-46,50-54,215-229,230-240
2x02 B:20-25,38-47,48-54,215-229,230-240
2hp9 A:21-25,38-46,50-54,215-229,230-240
2hp9 B:20-25,38-47,48-54,215-229,230-240
3nqb A:407-417,440-447,454-463,469-475,480-487
3nqb B:407-417,440-447,454-463,469-475,480-487
2qf2 B:429-438,443-447,509-521,549-554,555-560
2qf2 A:429-438,443-447,509-521,549-554,555-560
2qf1 A:429-438,443-447,509-521,549-554,555-560
3q7v B:16-20,29-39,40-47,204-218,219-231
3q7v A:16-20,29-39,40-47,204-218,219-231
2hdk A:9-13,36-45,50-56,137-150,159-172
2hdk B:509-513,536-545,550-556,638-650,659-671
2rke A:429-438,443-447,509-521,549-554,555-560
2hpb B:20-25,38-47,48-54,215-229,230-240
2hpb A:21-25,38-46,50-54,215-229,230-240
1ygg A:355-364,370-374,434-442,471-477,478-484
3q82 B:16-20,29-39,40-47,204-218,219-231
3q82 A:16-20,29-39,40-47,204-218,219-231
3q81 B:16-20,29-39,40-47,204-218,219-231
3q81 A:16-20,29-39,40-47,204-218,219-231
3dt2 A:429-435,443-447,509-515,549-554,555-560
2wgv A:20-25,38-47,48-54,215-229,230-240
2wgv B:20-25,38-47,48-54,215-229,230-240
2x01 B:20-25,38-47,48-54,215-229,230-240
2x01 A:21-25,38-46,50-54,215-229,230-240
3dtb B:429-438,443-447,509-521,549-554,555-560
3dtb A:429-435,443-447,509-515,549-554,555-560
2rkd A:429-438,443-447,509-521,549-554,555-560
2fah D:448-454,462-466,528-534,568-573,574-579
2fah B:448-454,462-466,528-534,568-573,574-579
2fah A:448-454,462-466,528-534,568-573,574-579
2fah C:448-454,462-466,528-534,568-573,574-579
2rl3 B:20-25,38-47,48-54,215-229,230-240
2rl3 A:20-25,38-46,49-54,215-229,230-240
2qzy B:448-454,462-466,528-534,568-573,574-579
2qzy A:448-454,462-466,528-534,568-573,574-579
3moh B:429-434,443-447,509-515,549-554,555-560
3moh A:429-434,443-447,509-515,549-554,555-560
1ylh A:355-364,370-374,434-442,471-477,478-484
3dt7 A:429-435,443-447,509-515,549-554,555-560
3dt7 B:429-438,443-447,509-521,549-554,555-560
2wkh A:21-25,38-46,50-54,215-229,230-240
2wkh B:20-25,38-47,48-54,215-229,230-240
3lce B:21-25,38-46,50-55,216-229,230-240
3lce A:21-25,38-46,50-54,215-229,230-240
1yvy A:349-358,364-368,428-436,464-471,472-479
1yvy B:1349-1357,1364-1368,1428-1436,1464-1471,1472-1479
2coj A:29-33,55-64,70-76,158-170,179-191
2coj B:29-33,55-64,70-76,158-170,179-191
2wgw A:20-25,38-46,49-54,215-229,230-240
2wgw B:20-25,38-47,48-54,215-229,230-240
2rka C:429-438,443-447,509-521,549-554,555-560
2rka A:429-438,443-447,509-521,549-554,555-560
2faf B:448-454,462-466,528-534,568-573,574-579
2faf A:448-454,462-466,528-534,568-573,574-579