1. e.62.1 Heme iron utilization protein-like
Heme iron utilization protein-like 2 domains; d1 - 3-helical bundle similar to the homeodomain-like fold; d2 - 6-stranded beta-barrel capped by two helices at one end, similar topology to the PH-like fold
1u9t d1u9ta1 A:61-69,70-78,120-129,131-139,273-280
2hq2 d2hq2a1 A:61-69,70-78,118-129,131-139,273-279
2j0r d2j0ra1 A:63-71,72-80,120-131,133-141,276-283
2j0p d2j0pa1 A:62-71,72-80,120-131,133-141,276-283
2. d.153.1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) N-terminal residue provides two catalytic groups, nucleophile and proton donor !
Ntn hydrolase-like 4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
2imh d2imha1 A:0-11,12-23,104-111,112-119,162-170
3. d.343.1 MM3350-like
MM3350-like beta(2)-alpha-beta(4); antiparallel beta-sheet; order: 216534; similar to a ubiquitin-like fold with the extra C-terminal strand inserted in the middle of the beta-sheet
2i1s d2i1sa1 A:6-16,22-30,99-106,110-123,130-137
2i1s d2i1sb1 B:6-16,22-30,99-106,110-123,130-137
4. b.152.1 Flagellar hook protein flgE
Flagellar hook protein flgE consists of two different domains; d1: [complex fold made of bifurcated beta-sheets]; d2 (inserted into d1): [beta-sandwich; 8 strands in 2 sheets]
1wlg d1wlga_ A:80-87,89-95,105-110,112-120,331-335
1wlg d1wlgb_ B:80-87,89-95,105-110,112-120,331-335
5. d.110.3 PYP-like sensor domain (PAS domain) alpha-beta(2)-alpha(2)-beta(3) !
Profilin-like core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha
2ool d2oolb2 B:43-50,53-61,113-126,127-135,240-245
3c2w d3c2wc3 C:27-34,36-43,92-103,104-113,218-223
3c2w d3c2wg3 G:27-34,36-43,92-103,104-113,218-223
3c2w d3c2wf3 F:27-34,36-43,92-103,104-113,218-223
3c2w d3c2wh3 H:27-34,36-43,92-103,104-113,218-222
1ztu d1ztua2 A:39-47,48-56,109-119,120-129,231-236
2ool d2oola2 A:43-51,52-60,113-126,127-135,240-245
List of motif hits that are not present in SCOP but are found in PDB for pattern ID: 294 (enumeration index: query2118) of S5
2bcf A:43-51,52-60,238-248,249-260,287-291
2ffl B:2-13,14-24,31-37,40-55,109-115
2ffl C:3-13,14-24,31-37,40-54,109-115
2ffl D:3-13,14-24,31-37,40-54,109-115
2ffl A:3-13,14-25,31-37,40-54,108-115
2cw8 A:76-85,87-94,116-124,497-512,524-530
2qvw A:1-13,14-25,31-38,41-52,108-115
2qvw D:1-13,14-25,31-38,41-52,108-115
2qvw B:1-13,14-25,31-37,40-52,108-115
2qvw C:2-13,14-25,31-37,42-55,108-115
2bgy A:80-87,89-95,105-110,112-119,331-335
2bgz A:80-87,89-95,105-110,112-120,331-335
3ile A:6-17,18-28,36-42,43-51,52-65
3k8m B:221-228,233-241,269-273,275-282,319-324
3ii3 A:6-17,18-28,36-42,43-51,53-65
3nhq A:26-34,36-43,94-103,104-113,218-223
3nhq B:27-34,36-43,92-103,104-113,218-223
3nhq G:27-34,36-43,92-103,104-113,218-223
3nhq C:27-34,36-43,92-103,104-113,218-223
3nhq D:27-34,36-43,94-103,104-113,218-223
3nhq F:27-34,36-43,92-103,104-113,218-223
3nhq H:27-34,36-43,92-103,104-113,218-223
3nhq E:27-34,36-43,92-103,104-113,218-223
3ibr B:27-34,36-43,92-103,104-113,218-223
3ibr A:26-34,36-43,92-103,104-113,218-223
2cw7 A:76-85,87-94,116-124,497-512,524-530
3ild A:7-16,18-28,36-42,43-50,53-65
3g6o A:27-34,36-43,92-103,104-113,218-222
3g6o B:27-34,36-43,92-103,104-113,218-223
3pxp C:110-116,118-125,235-249,250-261,279-283
3pxp A:110-116,118-125,235-249,250-261,279-283
3lpe D:1-6,7-12,14-18,19-25,50-56
3lpe B:1-6,7-12,14-18,19-25,50-56
3lpe F:1-6,7-12,14-18,19-25,50-56
3lpe H:1-6,7-12,14-18,19-25,50-56
3ii2 A:6-17,18-28,37-42,43-51,52-65
3a69 A:80-87,89-95,105-110,112-120,331-335
2imh B:0-11,12-23,104-111,112-119,162-170