1. e.38.1 Release factor
Release factor 4 domains: (1) 3-helical bundle; (2) alpha+beta of ferredoxin-like fold (3 and 4) alpha+beta of dsRDB-like fold
1gqe d1gqea_ A:127-135,175-185,196-204,213-225,323-329
2b3t d2b3tb1 B:110-120,157-168,179-187,196-208,305-313
1rq0 d1rq0b_ B:486-497,534-547,556-564,573-585,683-689
1rq0 d1rq0c_ C:886-897,934-947,956-964,973-985,1083-1089
1rq0 d1rq0a_ A:86-97,134-147,156-164,173-185,283-289
2fvo d2fvoa1 A:85-97,134-147,156-164,173-185,283-289
2. i.1.1 Ribosome and ribosomal fragments
Ribosome and ribosomal fragments
1ml5 d1ml5z_ Z:127-135,175-185,196-204,213-224,323-329
1mi6 d1mi6a_ A:125-135,174-187,197-205,212-224,323-329
3. c.66.1 S-adenosyl-L-methionine-dependent methyltransferases
S-adenosyl-L-methionine-dependent methyltransferases core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest
1yb2 d1yb2a1 A:7-12,13-21,42-49,50-57,251-255
List of motif hits that are not present in SCOP but are found in PDB for pattern ID: 295 (enumeration index: query2119) of S5
3ms0 V:106-116,153-164,175-183,192-204,301-308
2wh3 Y:115-125,162-173,184-193,200-213,311-317
3mr8 V:106-116,153-164,175-183,192-204,301-308
2wh1 Y:114-125,163-174,184-194,199-213,311-317
2x9r Y:115-125,164-173,184-193,200-213,311-316
3kfd F:59-69,70-80,96-104,108-116,122-126
3kfd H:59-69,70-80,96-104,108-116,122-126
2ihr 1:110-120,157-168,179-187,196-208,306-312
3f1g X:126-138,174-188,197-206,212-225,324-330
1zbt A:112-122,159-170,181-189,198-210,308-314
2x9t Y:115-125,163-173,184-193,200-213,311-317
3f1e X:126-138,174-188,197-206,212-225,323-330
3d5c X:106-116,153-164,175-183,192-204,302-308
2b9m Y:115-123,162-173,184-192,201-211,311-317
3d5a X:106-116,153-164,175-183,192-204,302-308