List of the counted superfamily hits for pattern ID: 1219 (enumeration index: query222.1163.1222.1855.2380) of S5

List of the counted superfamily hits for pattern ID: 1219 (enumeration index: query222.1163.1222.1855.2380) of S5

SCOP superfamily ID superfamiily description corresponding fold description
a.211.1HD-domain/PDEase-like HD-domain/PDEase-like multihelical; consists of two different alpha-helical bundles
f.59.1Cation efflux protein transmembrane domain-like Cation efflux protein transmembrane domain-like 6 transmembrane helices, bundle
a.65.1Annexin duplication: consists of four domains of the same fold ! Annexin 5 helices; folded leaf, closed
a.209.1ADP-ribosylglycohydrolase ADP-ribosylglycohydrolase multihelical; bundle
a.289.1Sec63 N-terminal domain-like Sec63 N-terminal domain-like multihelical; consists of two helical subdomains
a.118.5Bacterial muramidases alpha-alpha superhelix multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix
a.128.1Terpenoid synthases duplication: two metal-binding sites are related by a pseudo dyad that also relates helices C-F to helices G-J ! Terpenoid synthases multihelical; core: 8 helices (C-J) are arranged in 2 parallel layers
a.45.1GST C-terminal domain-like this domains follows the thioredoxin-like N-terminal domain ! GST C-terminal domain-like core: 4 helices; bundle, closed, left-handed twist; right-handed superhelix
a.29.11PA2201 N-terminal domain-like Bromodomain-like 4 helices; bundle; minor mirror variant of up-and-down topology
a.87.1DBL homology domain (DH-domain) DBL homology domain (DH-domain) multihelical; core: 5-helical bundle
a.203.1Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) multihelical; consists of two all-alpha subdomains
a.196.1Invasion protein A (SipA) , C-terminal actin binding domain Invasion protein A (SipA) , C-terminal actin binding domain 6 helices: orthogonal array
a.118.24Pseudo ankyrin repeat-like contains three helices per turn of the superhelix ! alpha-alpha superhelix multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix
f.1.3delta-Endotoxin (insectocide), N-terminal domain Toxins' membrane translocation domains multi-helical domains of various folds which is thought to unfold in the membrane
a.25.2Cobalamin adenosyltransferase-like crossover loop goes across a different side of the 4-helical bundle; no internal metal-binding site ! Ferritin-like core: 4 helices; bundle, closed, left-handed twist; 1 crossover connection
a.131.1Peridinin-chlorophyll protein duplication: consists of two 8-helical repeats ! Peridinin-chlorophyll protein multihelical: forms a boat-shaped protein shell around cofactors
f.1.1Colicin Toxins' membrane translocation domains multi-helical domains of various folds which is thought to unfold in the membrane
a.287.1TerB-like members of this superfamily probably related to the tellurite resistance protein TerB (Pfam 05099) of yet undetermined structureTerB-like multihelical; contains two central helices; duplication: there are two three-helical repeats related by pseudo twofold symmetry
f.1.2Diphtheria toxin, middle domain Toxins' membrane translocation domains multi-helical domains of various folds which is thought to unfold in the membrane
a.102.3Chondroitin AC/alginate lyase incomplete toroid ! alpha/alpha toroid multihelical; up to seven alpha-hairpins are arranged in closed circular array; there may be sequence similarities between different superfamilies
f.35.1Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 12 transmembrane helices; duplication: the N- and C-terminal halves of the whole proteins are structurally similar
a.260.1Rhabdovirus nucleoprotein-like Rhabdovirus nucleoprotein-like multihelical, consist of two helical domains; each domain contains a buried helix
a.294.1Tex N-terminal region-like Tex N-terminal region-like multihelical; irregular array of long and short helices; can be divided into several subdomains
a.191.1Methenyltetrahydrofolate cyclohydrolase-like Methenyltetrahydrofolate cyclohydrolase-like 5 helices; bundle, closed, left-handed twist