List of the counted superfamily hits for pattern ID: 301 (enumeration index: query2243) of S5

List of the counted superfamily hits for pattern ID: 301 (enumeration index: query2243) of S5

SCOP superfamily ID superfamiily description corresponding fold description
d.153.1N-terminal nucleophile aminohydrolases (Ntn hydrolases) N-terminal residue provides two catalytic groups, nucleophile and proton donor ! Ntn hydrolase-like 4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
b.25.1Osmotin, thaumatin-like protein has two smaller insertion domains ! Osmotin, thaumatin-like protein sandwich; 11 strands in 2 sheets
d.153.2Archaeal IMP cyclohydrolase PurO has a putative active site in the same topological location as the Ntn hydrolase but lacks the N-terminal nucleophile ! Ntn hydrolase-like 4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
b.8.1TRAF domain-like has a circularly permuted immunoglobulin-fold topology with extra strand ! TRAF domain-like sandwich; 8 strands in 2 sheets; greek-key
b.26.1SMAD/FHA domain has a few short helices inserted in loops ! SMAD/FHA domain sandwich; 11 strands in 2 sheets; greek-key
d.219.1PP2C-like contain binuclear metal (Mn) centre ! PP2C-like 4 layers: alpha/beta/beta/alpha; antiparallel beta sheets
b.1.9CBD9-like has additional strand at N-terminus; the active site in a similar topological location as the Cu,Zn SOD site ! Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.116.1Viral chemokine binding protein m3 Viral chemokine binding protein m3 consists of two different beta-sandwich domains of partial topological similarity to immunoglobulin-like folds
b.97.1Cytolysin/lectin some topological similarity to osmotin ! Cytolysin/lectin sandwich, 10 strands in 2 sheets;
b.1.10Clathrin adaptor appendage domain contains an additional N-terminal strand ! Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.33.1ISP domain ISP domain consists of two all-beta subdomains: conserved small domain has a rubredoxin-like fold; larger domain consists of 6 beta-stands packed in either sandwich of two 3-stranded sheets or closed barrel (n=6; S=8)
b.1.8Cu,Zn superoxide dismutase-like has additional strand at N-terminus ! Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
b.134.1Smp-1-like Smp-1-like sandwich; 9 strands in 2 sheets; greek-key/jelly-roll
b.32.1gp9 gp9 consists of two different beta-sandwich domains unrelated to other beta-sandwich folds
f.10.1Viral glycoprotein, central and dimerisation domains Viral glycoprotein, central and dimerisation domains 2 intertwined domains; all-beta and alpha+beta
b.2.1Diphtheria toxin, C-terminal domain Common fold of diphtheria toxin/transcription factors/cytochrome f sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold
c.153.1YerB-like YerB-like 3 layers: b/b/a; central mixed beta-sheet of 9 strands, order 541329678; strands 3 and 7 are antiparallel to the rest; an unusual "over the other end" connection between strands 3 and 4
f.6.1Leukocidin-like Leukocidin-like subunit fold contains beta-sandwich of Ig-like (grerk-key) topology and a beta-ribbon arm that forms an oligomeric transmembrane barrel
b.176.1AttH-like AttH-like duplication: two flattened beta-barrels of lipocalin-like topology are orthogonally packed with a pseudo twofold symmetry