2. c.50.1 Macro domain-like Macro domain-like 3 layers: a/b/a; mixed beta-sheet of 6 strands, order 165243, strand 3 is antiparallel to the rest 2acf d2acfa1 A:197-203,287-302,302-307,317-329,331-338 2acf d2acfd1 D:197-203,287-302,302-307,317-329,331-338 2acf d2acfb1 B:197-203,287-302,302-307,317-329,331-338 2acf d2acfc1 C:197-203,287-302,302-307,317-329,331-338 1spv d1spva_ A:4-10,92-112,114-119,129-149,152-159 2bfr d2bfra_ A:11-19,109-131,133-138,148-164,169-176 1vhu d1vhua_ A:18-26,116-138,140-145,155-171,176-183 1gyt d1gytf1 F:1-7,85-104,106-111,121-138,155-161 1gyt d1gyta1 A:1-7,85-104,106-111,121-138,155-161 1gyt d1gytc1 C:1-7,85-104,106-111,121-138,155-161 1gyt d1gytk1 K:1-7,85-104,106-111,121-138,155-161 1gyt d1gytj1 J:1-7,85-104,106-111,121-138,155-161 1gyt d1gyti1 I:1-7,85-104,106-111,121-138,155-161 1gyt d1gytl1 L:1-7,85-104,106-111,121-138,155-161 1gyt d1gytb1 B:1-7,85-104,106-111,121-138,155-161 1gyt d1gyth1 H:1-7,85-104,106-111,121-138,155-161 1gyt d1gytg1 G:1-7,85-104,106-111,121-138,155-161 1gyt d1gyte1 E:1-7,85-104,106-111,121-138,155-161 1gyt d1gytd1 D:1-7,85-104,106-111,121-138,155-161 1hjz d1hjza_ A:11-19,109-131,133-138,148-163,169-176 2bfq d2bfqa1 A:11-19,109-131,133-138,148-163,169-176 1hjz d1hjzb_ B:11-19,109-131,133-138,148-163,169-176 1zr3 d1zr3b1 B:194-202,282-302,304-309,319-339,344-350 1zr3 d1zr3d1 D:194-202,282-302,304-309,319-339,344-350 1zr3 d1zr3c1 C:194-202,282-302,304-309,319-339,344-349 1yd9 d1yd9c1 C:18-25,106-126,128-133,143-163,168-174 1yd9 d1yd9d1 D:18-26,106-126,128-133,143-163,168-174 1yd9 d1yd9b1 B:18-26,106-126,128-133,143-163,168-174 1yd9 d1yd9a1 A:18-25,106-126,128-133,143-163,168-174 2fxk d2fxkb1 B:194-202,282-302,304-309,319-339,344-350 2fxk d2fxka1 A:194-202,282-302,304-309,319-339,344-350 1zr3 d1zr3a1 A:194-202,282-302,304-309,319-339,344-351 1zr5 d1zr5a1 A:192-200,283-303,305-311,320-340,343-352 1zr5 d1zr5b1 B:192-200,283-303,305-310,320-340,343-352 2afc d2afca1 A:3-8,96-115,116-121,131-147,149-155 5. c.1.14 RuBisCo, C-terminal domain TIM beta/alpha-barrel contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 ! the first seven superfamilies have similar phosphate-binding sites 1rlc d1rlcl1 L:167-173,335-351,374-379,386-395,396-403 1rld d1rlda1 A:167-173,335-351,374-379,386-395,396-403 1rld d1rldb1 B:167-173,335-351,374-379,386-395,396-403 1ej7 d1ej7l1 L:167-173,335-351,374-379,386-395,396-403 3rub d3rubl1 L:167-173,335-351,374-379,386-395,396-403 1aa1 d1aa1e1 E:167-173,338-351,374-379,386-395,396-403 1aa1 d1aa1l1 L:167-173,338-351,374-379,386-395,396-403 1aa1 d1aa1h1 H:167-173,338-351,374-379,386-395,396-403 1aa1 d1aa1b1 B:167-173,338-351,374-379,386-395,396-403 2v69 d2v69b1 B:167-173,338-351,374-379,386-395,396-403 1rco d1rcob1 B:167-173,338-351,374-379,386-395,396-403 1rco d1rcoh1 H:167-173,338-351,374-379,386-395,396-403 1rco d1rcor1 R:167-173,338-351,374-379,386-395,396-403 1rco d1rcok1 K:167-173,338-351,374-379,386-395,396-403 1rco d1rcoe1 E:167-173,338-351,374-379,386-395,396-403 1rco d1rcol1 L:167-173,338-351,374-379,386-395,396-403 1rco d1rcov1 V:167-173,338-351,374-379,386-395,396-403 1rco d1rcoo1 O:167-173,338-351,374-379,386-395,396-403 8ruc d8rucg1 G:167-173,338-351,374-379,386-395,396-403 2v69 d2v69e1 E:167-173,338-351,374-379,386-395,396-403 2v69 d2v69c1 C:167-173,338-351,374-379,386-395,396-403 1rbo d1rbol1 L:167-173,338-351,374-379,386-395,396-403 1rbo d1rboe1 E:167-173,338-351,374-379,386-395,396-403 1rbo d1rbob1 B:167-173,338-351,374-379,386-395,396-403 1rbo d1rboh1 H:167-173,338-351,374-379,386-395,396-403 2v69 d2v69a1 A:167-173,338-351,374-379,386-395,396-403 1uzh d1uzhe1 E:167-173,338-351,374-379,386-395,396-403 4rub d4ruba1 A:167-173,338-351,374-379,386-395,396-403 1uwa d1uwav1 V:167-173,338-351,374-379,386-395,396-403 1uwa d1uwaa1 A:167-173,338-351,374-379,386-395,396-403 2v69 d2v69g1 G:167-173,338-351,374-379,386-395,396-403 1uzh d1uzhv1 V:167-173,338-351,374-379,386-395,396-403 1rbl d1rblc1 C:167-173,338-351,374-379,386-395,396-403 1rbl d1rble1 E:167-173,338-351,374-379,386-395,396-403 1rbl d1rblh1 H:167-173,338-351,374-379,386-395,396-403 1rbl d1rblb1 B:167-173,338-351,374-379,386-395,396-403 1rbl d1rblg1 G:167-173,338-351,374-379,386-395,396-403 1rbl d1rbld1 D:167-173,338-351,374-379,386-395,396-403 1rbl d1rbla1 A:167-173,338-351,374-379,386-395,396-403 1rbl d1rblf1 F:167-173,338-351,374-379,386-395,396-403 1uzh d1uzhk1 K:167-173,338-351,374-379,386-395,396-403 1uzd d1uzdr1 R:167-173,338-351,374-379,386-395,396-403 4rub d4rubc1 C:167-173,338-351,374-379,386-395,396-403 4rub d4rubb1 B:167-173,338-351,374-379,386-395,396-403 1uzh d1uzhr1 R:167-173,338-351,374-379,386-395,396-403 8ruc d8ruca1 A:167-173,338-351,374-379,386-395,396-403 4rub d4rubd1 D:167-173,338-351,374-379,386-395,396-403 1uzh d1uzhh1 H:167-173,338-351,374-379,386-395,396-403 1ir1 d1ir1b1 B:167-173,338-351,374-379,386-395,396-403 1uw9 d1uw9b1 B:167-173,338-351,374-379,386-395,396-403 1uzh d1uzha1 A:167-173,338-351,374-379,386-395,396-403 1uzd d1uzdv1 V:167-173,338-351,374-379,386-395,396-403 1ir1 d1ir1a1 A:167-173,338-351,374-379,386-395,396-403 8ruc d8rucc1 C:167-173,338-351,374-379,386-395,396-403 1ir1 d1ir1c1 C:167-173,338-351,374-379,386-395,396-403 2v68 d2v68d1 D:167-173,338-351,374-379,386-395,396-403 1uzd d1uzda1 A:167-173,338-351,374-379,386-395,396-403 8ruc d8ruce1 E:167-173,338-351,374-379,386-395,396-403 1ir1 d1ir1d1 D:167-173,338-351,374-379,386-395,396-403 2v68 d2v68b1 B:167-173,338-351,374-379,386-395,396-403 2v68 d2v68e1 E:167-173,338-351,374-379,386-395,396-403 1svd d1svda1 A:160-166,332-344,367-372,379-388,389-396 2cwx d2cwxe1 E:152-158,322-335,343-348,355-364,365-371 2d69 d2d69d1 D:152-158,322-335,343-348,355-364,365-371 1rxo d1rxoe1 E:167-174,335-351,374-379,386-395,396-403 1rxo d1rxoh1 H:167-174,335-351,374-379,386-395,396-403 1rxo d1rxol1 L:167-174,335-351,374-379,386-395,396-403 1rxo d1rxob1 B:167-174,335-351,374-379,386-395,396-403 2cwx d2cwxa1 A:152-158,322-335,343-348,355-364,365-371 2d69 d2d69a1 A:152-158,322-335,343-348,355-364,365-372 2d69 d2d69b1 B:152-158,322-335,343-348,355-364,365-371 2d69 d2d69e1 E:152-158,322-335,343-348,355-364,365-371 2cxe d2cxeb1 B:152-158,322-335,343-348,355-364,365-371 2cxe d2cxea1 A:152-158,322-335,343-348,355-364,365-371 2cxe d2cxec1 C:152-158,322-335,343-348,355-364,365-371 2cxe d2cxed1 D:152-158,322-335,343-348,355-364,365-371 1aus d1auso1 O:167-174,338-351,374-379,386-395,396-403 1aus d1ausl1 L:167-174,338-351,374-379,386-395,396-403 1aus d1ausm1 M:167-174,338-351,374-379,386-395,396-403 1aus d1ausn1 N:167-174,338-351,374-379,386-395,396-403 1rcx d1rcxo1 O:167-174,338-351,374-379,386-395,396-403 1rcx d1rcxk1 K:167-174,338-351,374-379,386-395,396-403 1rcx d1rcxr1 R:167-174,338-351,374-379,386-395,396-403 1rcx d1rcxe1 E:167-174,338-351,374-379,386-395,396-403 1rcx d1rcxh1 H:167-174,338-351,374-379,386-395,396-403 1rcx d1rcxl1 L:167-174,338-351,374-379,386-395,396-403 1rcx d1rcxb1 B:167-174,338-351,374-379,386-395,396-403 1rcx d1rcxv1 V:167-174,338-351,374-379,386-395,396-403 2v69 d2v69h1 H:167-174,338-351,374-379,386-395,396-403 2v69 d2v69d1 D:167-174,338-351,374-379,386-395,396-403 2v63 d2v63c1 C:167-174,338-351,374-379,386-395,396-403 1rsc d1rsce1 E:167-174,338-351,374-379,386-395,396-403 1rsc d1rsch1 H:167-174,338-351,374-379,386-395,396-403 1rsc d1rscf1 F:167-174,338-351,374-379,386-395,396-403 1rsc d1rsca1 A:167-174,338-351,374-379,386-395,396-403 1rsc d1rscd1 D:167-174,338-351,374-379,386-395,396-403 1rsc d1rscb1 B:167-174,338-351,374-379,386-395,396-403 1rsc d1rscc1 C:167-174,338-351,374-379,386-395,396-403 1rsc d1rscg1 G:167-174,338-351,374-379,386-395,396-403 2v69 d2v69f1 F:167-174,338-351,374-379,386-395,396-403 2v6a d2v6ad1 D:167-174,338-351,374-379,386-395,396-403 2v6a d2v6ag1 G:167-174,338-351,374-379,386-395,396-403 2v67 d2v67c1 C:167-174,338-351,374-379,386-395,396-403 2v6a d2v6ae1 E:167-174,338-351,374-379,386-395,396-403 2v67 d2v67e1 E:167-174,338-351,374-379,386-395,396-403 2v6a d2v6ac1 C:167-174,338-351,374-379,386-395,396-403 2v6a d2v6ah1 H:167-174,338-351,374-379,386-395,396-403 2v6a d2v6aa1 A:167-174,338-351,374-379,386-395,396-403 2v63 d2v63a1 A:167-174,338-351,374-379,386-395,396-403 2v63 d2v63d1 D:167-174,338-351,374-379,386-395,396-403 1ir2 d1ir2s1 S:167-174,338-351,374-379,386-395,396-403 2v6a d2v6af1 F:167-174,338-351,374-379,386-395,396-403 1ir2 d1ir2f1 F:167-174,338-351,374-379,386-395,396-403 1uwa d1uwar1 R:167-174,338-351,374-379,386-395,396-403 2v67 d2v67g1 G:167-174,338-351,374-379,386-395,396-403 2v63 d2v63e1 E:167-174,338-351,374-379,386-395,396-403 2v63 d2v63f1 F:167-174,338-351,374-379,386-395,396-403 2v63 d2v63h1 H:167-174,338-351,374-379,386-395,396-403 1uwa d1uwak1 K:167-174,338-351,374-379,386-395,396-403 1ir2 d1ir2b1 B:167-174,338-351,374-379,386-395,396-403 2v67 d2v67a1 A:167-174,338-351,374-379,386-395,396-403 2v67 d2v67d1 D:167-174,338-351,374-379,386-395,396-403 2v67 d2v67h1 H:167-174,338-351,374-379,386-395,396-403 2v67 d2v67b1 B:167-174,338-351,374-379,386-395,396-403 1uwa d1uwah1 H:167-174,338-351,374-379,386-395,396-403 2v63 d2v63g1 G:167-174,338-351,374-379,386-395,396-403 2v63 d2v63b1 B:167-174,338-351,374-379,386-395,396-403 1uwa d1uwab1 B:167-174,338-351,374-379,386-395,396-403 1uwa d1uwao1 O:167-174,338-351,374-379,386-395,396-403 2v67 d2v67f1 F:167-174,338-351,374-379,386-395,396-403 2v6a d2v6ab1 B:167-174,338-351,374-379,386-395,396-403 1wdd d1wdda1 A:167-174,338-351,374-379,386-395,396-403 1ir2 d1ir2x1 X:167-174,338-351,374-379,386-395,396-403 1uwa d1uwae1 E:167-174,338-351,374-379,386-395,396-403 1gk8 d1gk8g1 G:167-174,338-351,374-379,386-395,396-403 1uw9 d1uw9h1 H:167-174,338-351,374-379,386-395,396-403 1gk8 d1gk8a1 A:167-174,338-351,374-379,386-395,396-403 1uzh d1uzhb1 B:167-174,338-351,374-379,386-395,396-403 1uw9 d1uw9a1 A:167-174,338-351,374-379,386-395,396-403 1uzh d1uzho1 O:167-174,338-351,374-379,386-395,396-403 1ir2 d1ir2v1 V:167-174,338-351,374-379,386-395,396-403 1wdd d1wdde1 E:167-174,338-351,374-379,386-395,396-403 1uw9 d1uw9v1 V:167-174,338-351,374-379,386-395,396-403 1ir2 d1ir2h1 H:167-174,338-351,374-379,386-395,396-403 1uw9 d1uw9r1 R:167-174,338-351,374-379,386-395,396-403 1ir2 d1ir2y1 Y:167-174,338-351,374-379,386-395,396-403 1gk8 d1gk8e1 E:167-174,338-351,374-379,386-395,396-403 1uw9 d1uw9k1 K:167-174,338-351,374-379,386-395,396-403 1ir2 d1ir2c1 C:167-174,338-351,374-379,386-395,396-403 2v68 d2v68h1 H:167-174,338-351,374-379,386-395,396-403 1uw9 d1uw9o1 O:167-174,338-351,374-379,386-395,396-403 2v68 d2v68g1 G:167-174,338-351,374-379,386-395,396-403 1ir2 d1ir2z1 Z:167-174,338-351,374-379,386-395,396-403 1uw9 d1uw9e1 E:167-174,338-351,374-379,386-395,396-403 1ir2 d1ir2w1 W:167-174,338-351,374-379,386-395,396-403 2v68 d2v68f1 F:167-174,338-351,374-379,386-395,396-403 1ir2 d1ir2a1 A:167-174,338-351,374-379,386-395,396-403 1gk8 d1gk8c1 C:167-174,338-351,374-379,386-395,396-403 1ir2 d1ir2e1 E:167-174,338-351,374-379,386-395,396-403 1ir2 d1ir2d1 D:167-174,338-351,374-379,386-395,396-403 1ir2 d1ir2g1 G:167-174,338-351,374-379,386-395,396-403 2v68 d2v68c1 C:167-174,338-351,374-379,386-395,396-403 2v68 d2v68a1 A:167-174,338-351,374-379,386-395,396-403 1uzd d1uzde1 E:167-174,338-351,374-379,386-395,396-403 1uzd d1uzdk1 K:167-174,338-351,374-379,386-395,396-403 1uzd d1uzdh1 H:167-174,338-351,374-379,386-395,396-403 1uzd d1uzdo1 O:167-174,338-351,374-379,386-395,396-403 1ir2 d1ir2u1 U:167-174,338-351,374-379,386-395,396-403 1ir2 d1ir2t1 T:167-174,338-351,374-379,386-395,396-403 1uzd d1uzdb1 B:167-174,338-351,374-379,386-395,396-403 1bxn d1bxne1 E:170-177,340-353,376-381,388-397,398-405 1bxn d1bxna1 A:170-177,340-353,376-381,388-397,398-405 1bxn d1bxnc1 C:170-177,340-353,376-381,388-397,398-405 1bxn d1bxng1 G:170-177,340-353,376-381,388-397,398-405 1iwa d1iwai1 I:167-174,338-351,374-379,386-395,396-403 1iwa d1iwae1 E:167-174,338-351,374-379,386-395,396-403 1iwa d1iwag1 G:167-174,338-351,374-379,386-395,396-403 1iwa d1iwac1 C:167-174,338-351,374-379,386-395,396-403 1iwa d1iwao1 O:167-174,338-351,374-379,386-395,396-403 1iwa d1iwam1 M:167-174,338-351,374-379,386-395,396-403 1iwa d1iwaa1 A:167-174,338-351,374-379,386-395,396-403 1ykw d1ykwa1 A:164-170,331-344,352-359,361-373,375-380 1ykw d1ykwb1 B:164-170,331-344,352-359,361-373,375-380 1iwa d1iwak1 K:167-174,338-351,374-379,386-395,396-403 1tel d1tela1 A:1164-1170,1331-1344,1352-1357,1361-1373,1375-1380 1tel d1telb1 B:2164-2170,2331-2344,2352-2357,2361-2373,2375-2380 1geh d1geha1 A:156-161,324-339,362-367,371-383,386-391 1geh d1gehb1 B:156-161,324-339,362-367,371-383,386-391 1geh d1gehd1 D:156-161,324-339,362-367,371-383,386-391 1geh d1gehe1 E:156-161,324-339,362-367,371-383,386-391 1geh d1gehc1 C:156-161,324-339,362-367,371-383,386-391 1bwv d1bwva1 A:168-174,338-351,374-379,386-395,398-403 1bwv d1bwve1 E:168-174,338-351,374-379,386-395,398-403 1bwv d1bwvc1 C:168-174,338-351,374-379,386-395,398-403 1bwv d1bwvg1 G:168-174,338-351,374-379,386-395,398-403 9rub d9rubb1 B:158-164,334-345,363-369,372-384,387-392 2rus d2rusb1 B:158-164,335-345,363-370,372-384,387-395 14. e.25.1 Sec1/munc18-like (SM) proteins Sec1/munc18-like (SM) proteins 3 domains: (1 and 2) alpha+beta; (3) mostly alpha, inserted in domain 2 1fvf d1fvfa_ A:140-145,482-494,537-545,548-563,566-574 1fvf d1fvfb_ B:140-145,482-494,537-545,548-563,566-574 1fvh d1fvha_ A:140-145,482-494,536-545,548-563,565-574 1epu d1epua_ A:140-145,482-494,536-545,548-563,565-573 1mqs d1mqsa_ A:169-174,556-568,604-612,615-629,634-641 18. c.1.2 Ribulose-phoshate binding barrel TIM beta/alpha-barrel contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 ! the first seven superfamilies have similar phosphate-binding sites 1tqx d1tqxa_ A:6-12,157-172,175-180,183-194,196-201 1tqx d1tqxb_ B:6-12,157-172,175-180,183-194,196-201 1vc4 d1vc4b_ B:46-53,191-206,209-215,219-227,231-236 2fli d2flig1 G:4-10,150-168,171-177,180-191,193-198 1h1z d1h1za_ A:6-12,156-171,174-179,182-193,195-200 2fli d2flih1 H:4-10,150-168,171-177,180-191,193-198 2fli d2flii1 I:4-10,150-168,171-177,180-191,193-198 1h1z d1h1zb_ B:6-12,156-171,174-179,182-193,195-200 2fli d2flid1 D:4-10,150-168,171-177,180-191,193-198 2fli d2flie1 E:4-10,150-168,171-177,180-191,193-198 1jcm d1jcmp_ P:48-55,194-206,209-215,219-230,231-236 2fli d2flij1 J:4-10,150-168,171-177,180-191,193-198 2fli d2flia1 A:4-10,150-168,171-177,180-191,193-198 2fli d2flib1 B:4-10,150-168,171-177,180-191,193-198 2fli d2flif1 F:4-10,150-168,171-177,180-191,193-198 1wdw d1wdwg1 G:5-13,176-190,193-198,202-213,215-219 2fli d2flil1 L:4-10,150-168,171-177,180-191,193-198 1wdw d1wdwe1 E:5-13,176-190,193-198,202-213,215-219 1wdw d1wdwa1 A:5-13,176-190,193-198,202-213,215-219 1wdw d1wdwi1 I:5-13,176-190,193-198,202-213,215-219 2fli d2flic1 C:4-10,150-168,171-177,180-191,193-198 1vc4 d1vc4a_ A:46-53,191-206,209-215,219-227,231-236 2fli d2flik1 K:4-10,150-168,171-177,180-191,193-198 1wdw d1wdwc1 C:5-13,176-190,193-198,202-213,215-219 1pii d1piia2 A:48-55,194-206,209-215,219-230,231-236 1h1y d1h1ya_ A:6-12,156-171,174-179,182-193,195-200 1geq d1geqb_ B:5-13,176-190,193-198,202-213,215-219 1h1y d1h1yb_ B:6-12,156-171,174-179,182-193,195-200 1geq d1geqa_ A:5-13,176-190,193-198,202-213,215-219 1tjr d1tjra1 A:102-110,270-285,287-292,296-307,309-313 1tqj d1tqjd_ D:5-11,153-171,174-180,183-194,196-201 1tqj d1tqjf_ F:5-11,153-171,174-180,183-194,196-201 1tqj d1tqjc_ C:5-11,153-171,174-180,183-194,196-201 1tqj d1tqjb_ B:5-11,153-171,174-180,183-194,196-201 1j5t d1j5ta_ A:20-27,163-178,182-188,192-200,204-209 1tqj d1tqja_ A:5-11,153-171,174-180,183-194,196-201 1rpx d1rpxa_ A:11-17,159-177,180-186,189-200,202-207 1tqj d1tqje_ E:5-11,153-171,174-180,183-194,196-201 1rpx d1rpxb_ B:11-17,159-177,180-186,189-200,202-207 1tjr d1tjrb1 B:102-110,270-284,287-292,296-307,309-313 1rpx d1rpxc_ C:11-17,159-177,180-186,189-200,202-207 1rd5 d1rd5a_ A:18-26,186-200,203-208,212-223,225-230 2cz5 d2cz5b1 B:1-6,142-153,157-163,167-178,180-185 2czf d2czfa1 A:1-6,142-153,157-163,167-178,180-185 1los d1losd_ D:3014-3019,3160-3172,3175-3181,3188-3197,3197-3202 1znn d1znnd1 D:19-26,156-177,207-212,217-228,230-235 1y0e d1y0eb_ B:4-11,163-174,176-180,185-196,198-203 1jul d1jula_ A:47-53,190-202,205-211,215-226,228-233 1rd5 d1rd5b_ B:18-26,187-201,203-208,212-223,225-230 1y0e d1y0ea_ A:4-11,163-174,176-180,185-196,198-203 1juk d1juka_ A:47-53,190-202,205-211,215-226,228-233 1wdw d1wdwk1 K:5-13,179-190,193-198,202-213,215-219 1lbl d1lbla_ A:47-53,190-201,205-211,215-226,228-233 1a53 d1a53a_ A:47-53,190-201,205-211,215-226,228-233 1lbf d1lbfa_ A:47-53,190-201,205-211,215-226,228-233 1igs d1igsa_ A:47-53,190-201,205-211,215-226,228-233 1i4n d1i4na_ A:42-49,189-201,204-210,214-222,226-231 1ujp d1ujpa_ A:16-24,189-202,204-209,213-223,224-228 2cz5 d2cz5a1 A:1-6,142-153,157-163,169-178,180-185 1i4n d1i4nb_ B:42-49,189-201,204-210,214-222,226-231 1thf d1thfd_ D:4-14,183-191,197-202,206-217,219-224 1vh7 d1vh7a_ A:4-14,183-191,197-202,206-217,219-224 1v5x d1v5xb_ B:2-7,135-146,148-153,159-167,169-174 1lol d1lola_ A:14-19,160-172,175-180,190-197,197-202 2czf d2czfb1 B:1-6,142-154,157-163,170-178,180-185 1gpw d1gpwe_ E:4-14,183-191,196-202,206-217,219-224 1gpw d1gpwa_ A:4-14,183-191,197-202,206-217,219-224 2a0n d2a0na1 A:4-14,183-191,197-202,206-217,219-224 1znn d1znnf1 F:20-26,156-177,207-212,217-228,230-235 1znn d1znne1 E:20-26,156-177,207-212,217-228,230-235 1wxj d1wxja1 A:16-24,189-201,204-209,213-223,224-228 1znn d1znnc1 C:20-26,156-177,207-212,217-228,230-235 1znn d1znnb1 B:20-26,156-177,207-212,217-228,230-235 1znn d1znna1 A:20-26,156-177,207-212,217-228,230-235 1xbz d1xbza1 A:4-11,149-163,164-170,173-181,186-191 2cze d2czeb1 B:1-6,142-153,157-163,170-178,180-185 1so4 d1so4a_ A:4-11,149-163,164-170,173-181,186-191 2cze d2czea1 A:1-6,142-153,157-163,170-178,180-185 1q6r d1q6ra_ A:4-11,149-163,164-170,173-181,186-191 1so6 d1so6a_ A:4-11,149-163,164-170,173-181,186-191 1xbx d1xbxa1 A:4-11,149-163,164-170,173-181,186-191 1so3 d1so3a_ A:4-11,149-163,164-170,173-181,186-191 1kv8 d1kv8a_ A:4-11,149-163,164-170,173-181,186-191 1nsj d1nsja_ A:2-8,140-148,153-158,161-173,175-180 1q6q d1q6qa_ A:4-11,149-163,164-170,173-181,186-191 1xbz d1xbzb1 B:4-11,149-163,164-170,173-181,186-191 1so5 d1so5a_ A:4-11,149-163,164-170,173-181,186-191 1h5y d1h5yb_ B:5-14,186-198,199-205,209-220,222-227 1xbv d1xbva1 A:4-11,149-163,164-170,173-181,186-191 1xby d1xbya1 A:4-11,149-163,164-170,173-181,186-191 1q6o d1q6oa_ A:4-11,149-163,164-170,173-181,186-191 1xbv d1xbvb1 B:4-11,149-163,164-170,173-181,186-191 1xbx d1xbxb1 B:4-11,149-163,164-170,173-181,186-191 1dl3 d1dl3a_ A:2-8,140-148,153-158,164-173,175-180 1lbm d1lbma_ A:2-8,140-148,153-158,161-173,175-180 1q6l d1q6la_ A:4-11,149-163,164-170,173-181,186-191 1h5y d1h5ya_ A:5-14,186-198,199-205,209-220,222-227 1so4 d1so4b_ B:4-11,149-163,164-170,173-181,186-191 1so3 d1so3b_ B:4-11,149-163,164-170,173-181,186-191 1kw1 d1kw1a_ A:4-11,149-163,164-170,173-181,186-191 1so6 d1so6b_ B:4-11,149-163,164-170,173-181,186-191 1q6l d1q6lb_ B:4-11,149-163,164-170,173-181,186-191 1q6r d1q6rb_ B:4-11,149-163,164-170,173-181,186-191 1kv8 d1kv8b_ B:4-11,149-163,164-170,173-181,186-191 1xby d1xbyb1 B:4-11,149-163,164-170,173-181,186-191 1q6o d1q6ob_ B:4-11,149-163,164-170,173-181,186-191 1c29 d1c29a_ A:17-25,192-204,206-212,216-227,229-234 1so5 d1so5b_ B:4-11,149-163,164-170,173-181,186-191 1q6q d1q6qb_ B:4-11,149-163,164-170,173-181,186-191 1dl3 d1dl3b_ B:1002-1008,1140-1148,1153-1158,1164-1173,1175-1180 2clk d2clka1 A:17-25,192-204,206-212,216-227,229-233 1wbj d1wbja1 A:17-25,192-204,206-212,216-227,229-233 1tjp d1tjpa1 A:17-25,192-204,206-212,216-227,229-233 1qop d1qopa_ A:17-25,192-204,206-212,216-227,229-233 1gpw d1gpwc_ C:4-14,183-195,197-202,206-217,219-224 1k3u d1k3ua_ A:17-25,192-204,206-212,216-227,229-233 3cep d3cepa1 A:17-25,192-204,206-212,216-227,229-233 1ka9 d1ka9f_ F:5-15,184-196,197-203,207-218,220-225 1cw2 d1cw2a_ A:17-25,192-204,206-212,216-227,229-233 1cx9 d1cx9a_ A:17-25,192-204,206-212,216-227,229-234 1k7e d1k7ea_ A:17-25,192-204,206-212,216-227,229-233 2za1 d2za1a1 A:17-23,245-257,260-264,272-282,287-293 1k8y d1k8ya_ A:17-25,192-204,206-212,216-227,229-233 1vzw d1vzwa1 A:4-14,178-190,191-196,201-215,217-222 1c8v d1c8va_ A:17-25,192-204,206-212,216-227,229-234 2vep d2vepa1 A:4-14,178-190,191-196,201-215,217-222 1qo2 d1qo2b_ B:1-11,176-188,189-195,199-214,216-223 1c9d d1c9da_ A:17-25,192-204,206-211,216-227,229-234 1qo2 d1qo2a_ A:1-11,176-188,189-195,199-214,216-223 2q8z d2q8zb1 B:17-23,245-257,260-264,272-281,287-293 2zcg d2zcgb1 B:17-23,245-257,260-264,272-281,287-293 2q8z d2q8za1 A:17-23,245-257,260-264,272-281,287-293 2za2 d2za2b1 B:17-23,245-257,260-264,275-282,287-293 2qaf d2qafb1 B:17-23,245-257,260-264,272-281,287-293 3bar d3bara1 A:17-23,245-257,260-264,272-281,287-293 3bar d3barb1 B:17-23,245-257,260-264,272-281,287-293 2zcg d2zcga1 A:17-23,245-257,260-264,272-281,287-293 2q8l d2q8la1 A:17-23,245-257,260-265,272-281,287-293 2qaf d2qafa1 A:17-23,245-257,260-264,272-281,287-293 2f84 d2f84a1 A:17-23,245-257,260-265,272-281,287-293 2guu d2guua1 A:35-41,276-288,291-296,303-312,318-324 2aqw d2aqwa1 A:17-23,248-260,263-267,275-284,290-296 2ffc d2ffca1 A:35-41,276-288,291-295,303-312,318-324 2fds d2fdsa1 A:16-22,247-259,262-266,274-283,289-295 2fds d2fdsb1 B:16-22,247-259,262-266,274-283,289-295 19. c.1.26 Homocysteine S-methyltransferase TIM beta/alpha-barrel contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 ! the first seven superfamilies have similar phosphate-binding sites 1q8a d1q8aa2 A:15-21,210-225,228-235,250-265,267-274 1q7z d1q7zb2 B:15-21,210-225,228-235,250-265,267-274 1q7m d1q7mb2 B:15-21,210-225,228-235,250-265,267-274 3bof d3bofa2 A:15-21,210-226,228-235,250-265,267-274 1q85 d1q85a2 A:15-21,210-226,228-235,250-265,267-274 1q7q d1q7qb2 B:15-21,210-226,228-235,250-265,267-274 1q8j d1q8ja2 A:15-21,210-226,228-235,250-265,267-274 3bol d3bola2 A:15-21,210-226,228-235,250-265,267-274 1q7z d1q7za2 A:15-21,210-226,228-235,250-265,267-274 3bol d3bolb2 B:15-21,210-226,228-235,250-265,267-274 1q8a d1q8ab2 B:15-21,210-226,228-235,250-265,267-274 1q8j d1q8jb2 B:15-21,210-226,228-235,250-265,267-274 1q7q d1q7qa2 A:15-21,210-226,227-233,250-265,267-274 3bof d3bofb2 B:15-21,210-226,228-235,250-265,267-274 1q85 d1q85b2 B:15-19,210-225,227-235,250-265,267-274 1lt8 d1lt8a_ A:22-28,220-239,242-250,277-292,294-301 1q7m d1q7ma2 A:15-21,210-226,227-235,250-265,267-274 1umy d1umyc_ C:22-28,220-239,242-250,277-292,294-301 1umy d1umyb_ B:22-28,220-239,242-250,277-292,294-301 1umy d1umyd_ D:22-28,220-239,242-250,277-292,294-301 1lt7 d1lt7b_ B:22-26,220-239,242-248,277-292,294-299 1umy d1umya_ A:22-28,220-239,242-250,277-292,294-301 1lt8 d1lt8b_ B:22-26,220-239,242-248,277-292,294-299 25. c.1.24 Pyridoxine 5'-phosphate synthase TIM beta/alpha-barrel contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 ! the first seven superfamilies have similar phosphate-binding sites 1ho4 d1ho4d_ D:4-10,164-186,187-193,196-207,210-215 1ho4 d1ho4b_ B:4-10,164-186,187-193,196-207,210-215 1ixn d1ixnb_ B:4-10,164-186,187-193,196-207,210-215 1ho4 d1ho4a_ A:4-10,164-186,187-193,196-207,210-215 1ixq d1ixqa_ A:4-10,164-186,187-193,196-207,210-215 1ho4 d1ho4c_ C:4-10,164-186,187-193,196-207,210-215 1ixp d1ixpd_ D:4-10,164-186,187-193,196-207,210-215 1ho1 d1ho1d_ D:4-10,164-186,187-193,196-207,210-215 1ho1 d1ho1a_ A:4-10,164-186,187-193,196-207,210-215 1ho1 d1ho1c_ C:4-10,164-186,187-193,196-207,210-215 1ixq d1ixqc_ C:4-10,164-186,187-193,196-207,210-215 1ixn d1ixnc_ C:4-9,164-186,187-192,196-207,210-215 1ixq d1ixqb_ B:4-10,164-186,187-193,196-207,210-215 1ixo d1ixoa_ A:4-10,164-186,187-192,196-207,210-215 1m5w d1m5wh_ H:4-10,164-186,187-192,196-207,209-215 1m5w d1m5we_ E:4-10,164-186,187-192,196-207,209-215 1m5w d1m5wb_ B:4-10,164-186,187-192,196-207,210-215 1ixp d1ixpb_ B:4-10,164-186,187-192,196-207,210-215 1ixp d1ixpa_ A:4-10,164-186,187-192,196-207,210-215 1m5w d1m5wd_ D:4-10,164-186,187-192,196-207,209-215 1ixn d1ixnd_ D:4-10,164-186,187-192,196-207,209-215 1ixn d1ixna_ A:4-10,164-186,187-192,196-207,210-215 1m5w d1m5wa_ A:4-10,164-186,187-192,196-207,210-215 1ixp d1ixpc_ C:4-10,164-186,187-192,196-207,210-215 1m5w d1m5wf_ F:4-10,164-186,187-192,196-207,210-215 1ixo d1ixoc_ C:4-10,164-186,187-192,196-207,210-215 1ixo d1ixod_ D:4-10,164-186,187-192,196-207,209-215 1ho1 d1ho1b_ B:4-10,164-186,187-192,196-207,210-215 1m5w d1m5wc_ C:4-10,164-186,187-192,196-207,209-215 1ixq d1ixqd_ D:4-10,164-186,187-192,196-207,210-215 1ixo d1ixob_ B:4-10,164-186,187-192,196-207,210-215 1m5w d1m5wg_ G:4-10,164-186,187-192,196-207,209-215 28. c.1.17 Nicotinate/Quinolinate PRTase C-terminal domain-like incomplete beta/alpha barrel with parallel beta-sheet of 7 strands ! TIM beta/alpha-barrel contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 ! the first seven superfamilies have similar phosphate-binding sites 1qpq d1qpqe1 E:2133-2138,2225-2241,2243-2249,2252-2263,2265-2270 1qpq d1qpqd1 D:1633-1638,1725-1741,1743-1749,1752-1763,1765-1770 1qpr d1qprb1 B:133-138,225-241,243-249,252-263,265-270 1qpr d1qpre1 E:133-138,225-241,243-249,252-263,265-270 1qpr d1qprc1 C:133-138,225-241,243-249,252-263,265-270 1qpq d1qpqb1 B:633-638,725-741,743-749,752-763,765-770 1qpo d1qpoe1 E:2133-2138,2225-2241,2243-2249,2252-2263,2265-2270 1qpo d1qpod1 D:1633-1638,1725-1741,1743-1749,1752-1763,1765-1770 1qpq d1qpqf1 F:2633-2638,2725-2741,2743-2749,2752-2763,2765-2770 1qpn d1qpne1 E:2133-2138,2225-2241,2243-2249,2252-2263,2265-2270 1qpo d1qpof1 F:2633-2638,2725-2741,2743-2749,2752-2763,2765-2770 1qpo d1qpoc1 C:1133-1138,1225-1241,1243-1249,1252-1263,1265-1270 1qpn d1qpnd1 D:1633-1638,1725-1741,1743-1749,1752-1763,1765-1770 1qpq d1qpqc1 C:1133-1138,1225-1241,1243-1249,1252-1263,1265-1270 1qpr d1qprd1 D:133-138,225-241,243-249,252-263,265-270 1qpr d1qpra1 A:133-138,225-241,243-249,252-263,265-270 1qpq d1qpqa1 A:133-138,225-241,243-249,252-263,265-270 1qpo d1qpoa1 A:133-138,225-241,243-249,252-263,265-270 1qpr d1qprf1 F:133-138,225-241,243-249,252-263,265-270 1qap d1qapa1 A:146-151,238-250,254-259,262-273,275-280 1qpn d1qpnc1 C:1133-1138,1225-1241,1243-1249,1252-1263,1265-1270 1qpn d1qpna1 A:133-138,225-241,243-249,252-263,265-270 1qpn d1qpnb1 B:633-638,725-741,743-749,752-763,765-770 1qpn d1qpnf1 F:2633-2638,2725-2741,2743-2749,2752-2763,2765-2770 1qpo d1qpob1 B:633-638,725-741,743-749,752-763,765-770 1qap d1qapb1 B:146-151,238-250,254-259,262-273,275-280 1o4u d1o4ub1 B:118-122,211-227,229-236,238-247,251-256 1o4u d1o4ua1 A:118-122,211-227,229-236,238-247,251-256 1vlp d1vlpa2 A:173-178,299-316,322-327,331-346,347-355 1vlp d1vlpb2 B:173-178,299-316,322-327,331-346,347-355 1vlp d1vlpc2 C:173-178,299-316,322-327,331-346,347-355 1vlp d1vlpd2 D:173-178,299-316,322-327,331-346,347-355 1ytd d1ytda1 A:133-139,245-261,265-270,274-285,287-293 1ybe d1ybea1 A:197-201,317-333,339-344,348-360,363-370 1yir d1yirb1 B:173-178,292-308,314-319,323-335,339-345 1yir d1yird1 D:173-179,292-308,314-319,323-335,339-346 1ybe d1ybeb1 B:197-202,317-333,339-344,348-360,363-371 1yir d1yirc1 C:173-179,292-308,314-319,323-335,339-346 1yir d1yira1 A:173-179,292-308,314-319,323-335,339-346 29. c.1.21 Dihydropteroate synthetase-like TIM beta/alpha-barrel contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 ! the first seven superfamilies have similar phosphate-binding sites 1eye d1eyea_ A:6-14,185-196,205-209,229-248,250-255 1tx0 d1tx0b_ B:20-26,192-203,212-216,234-249,251-256 1tww d1twwb_ B:20-26,192-203,212-216,234-249,251-256 1tww d1twwa_ A:20-26,192-203,212-216,234-249,251-256 1tx0 d1tx0a_ A:20-26,192-203,212-216,234-249,251-256 1f6y d1f6ya_ A:1-11,169-186,191-197,206-222,224-228 1twz d1twza_ A:20-26,192-203,212-216,234-249,251-256 1twz d1twzb_ B:20-26,192-203,212-216,234-249,251-256 1tx2 d1tx2b_ B:20-26,192-203,212-216,234-249,251-256 1tx2 d1tx2a_ A:20-26,192-203,212-216,234-249,251-256 1ad1 d1ad1b_ B:4-12,175-186,195-199,215-234,236-241 1ad4 d1ad4b_ B:4-12,175-186,195-199,215-234,236-241 1ad4 d1ad4a_ A:4-12,175-186,195-199,215-234,236-241 1tws d1twsb_ B:20-27,192-203,212-216,234-249,251-256 1q7q d1q7qb1 B:315-324,484-499,501-506,516-531,533-537 1aj0 d1aj0a_ A:15-24,193-204,213-217,235-250,252-257 1aj2 d1aj2a_ A:15-24,193-204,213-217,235-250,252-257 1f6y d1f6yb_ B:1-11,169-188,191-197,206-222,224-228 1q7m d1q7ma1 A:315-324,484-499,501-506,515-531,533-538 1q8j d1q8jb1 B:315-324,484-499,501-506,515-531,533-538 1tws d1twsa_ A:20-28,192-203,212-216,234-249,251-256 1q7m d1q7mb1 B:315-324,484-499,501-506,515-531,533-538 3bof d3bofa1 A:315-324,484-499,501-506,515-531,533-538 1q85 d1q85a1 A:315-324,484-499,501-506,515-531,533-538 1ajz d1ajza_ A:15-24,193-204,213-217,235-250,252-256 1q7z d1q7za1 A:315-324,484-499,501-506,515-531,533-538 1q8j d1q8ja1 A:315-324,484-499,501-506,515-531,533-538 3bol d3bola1 A:315-324,484-499,501-506,515-531,533-538 3bol d3bolb1 B:315-324,484-499,501-506,515-531,533-538 1q7z d1q7zb1 B:315-324,484-499,501-506,515-531,533-538 1q8a d1q8ab1 B:315-324,484-499,501-506,515-531,533-538 1q8a d1q8aa1 A:315-324,484-499,501-506,515-531,533-537 1q7q d1q7qa1 A:315-324,484-499,501-506,515-531,533-538 3bof d3bofb1 B:315-324,484-499,501-506,515-531,533-537 1q85 d1q85b1 B:315-324,484-499,501-506,515-531,533-537 1ad1 d1ad1a_ A:4-12,175-186,194-199,215-234,236-241 32. c.1.31 ThiG-like shares the common phosphate-binding site with other superfamilies ! TIM beta/alpha-barrel contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 ! the first seven superfamilies have similar phosphate-binding sites 1tyg d1tyga_ A:114-118,266-277,279-286,289-300,302-307 1tyg d1tygc_ C:114-118,266-277,279-286,289-300,302-307 1xm3 d1xm3b_ B:14-19,166-177,179-186,189-200,202-207 1xm3 d1xm3a_ A:14-19,166-177,179-186,189-200,202-207 1xm3 d1xm3c_ C:14-19,166-177,179-186,189-200,202-207 1xm3 d1xm3d_ D:14-19,166-177,179-187,189-200,202-207 1wv2 d1wv2b_ B:2021-2026,2175-2186,2189-2194,2198-2209,2211-2216 1wv2 d1wv2a_ A:1021-1026,1175-1186,1189-1194,1198-1209,1211-1216 34. c.1.30 CutC-like TIM beta/alpha-barrel contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 ! the first seven superfamilies have similar phosphate-binding sites 1twd d1twdb_ B:2-9,153-168,171-176,180-191,193-198 1x7i d1x7ib1 B:2-9,157-167,171-176,180-191,193-198 1x8c d1x8cb1 B:2-9,157-169,171-176,180-191,193-198 1x7i d1x7ia1 A:2-9,157-168,171-176,180-191,193-198 1twd d1twda_ A:2-9,157-168,171-176,180-191,193-198 1x8c d1x8ca1 A:2-9,157-168,171-176,180-191,193-198 35. c.1.1 Triosephosphate isomerase (TIM) TIM beta/alpha-barrel contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 ! the first seven superfamilies have similar phosphate-binding sites 1r2r d1r2rb_ B:5-12,177-197,205-210,213-224,227-232 1kv5 d1kv5a_ A:5-12,179-199,207-212,215-226,229-234 1btm d1btmb_ B:3-9,178-198,205-211,214-225,228-233 1hti d1htia_ A:5-12,177-197,205-210,213-224,227-232 1btm d1btma_ A:3-9,178-198,205-211,214-225,228-233 1hg3 d1hg3a_ A:7-13,159-175,177-182,187-198,200-205 1hg3 d1hg3e_ E:7-13,159-175,177-182,187-198,200-205 1hg3 d1hg3c_ C:7-13,159-175,177-182,187-198,200-205 1hg3 d1hg3f_ F:7-13,159-175,177-182,187-198,200-205 1hg3 d1hg3d_ D:7-13,159-175,177-182,187-198,200-205 1b9b d1b9ba_ A:5-11,180-200,208-213,216-227,230-235 1hg3 d1hg3h_ H:7-13,159-175,177-182,187-198,200-205 1r2r d1r2rc_ C:5-13,177-197,205-210,213-224,227-232 1su5 d1su5a_ A:6-12,177-197,205-210,213-224,227-232 2oma d2omab1 B:7-13,180-200,208-213,216-227,230-235 1sux d1suxb_ B:7-13,180-200,208-213,216-227,230-235 1tmh d1tmhc_ C:6-12,181-201,207-213,216-227,230-235 1tmh d1tmha_ A:6-12,181-201,207-213,216-227,230-235 1wyi d1wyib1 B:5-13,177-197,205-210,213-224,227-232 1lyx d1lyxa_ A:5-11,177-197,205-210,213-224,227-232 1su5 d1su5b_ B:6-12,177-197,205-210,213-224,227-232 1tmh d1tmhd_ D:6-12,181-201,208-213,216-227,230-235 1wyi d1wyia1 A:6-12,177-197,205-210,213-224,227-232 1ssg d1ssga_ A:6-12,177-197,205-210,213-224,227-232 1ssd d1ssda_ A:6-12,177-197,205-210,213-224,227-232 1ssg d1ssgb_ B:6-12,177-197,205-210,213-224,227-232 1r2r d1r2rd_ D:6-12,177-197,205-210,213-224,227-232 1r2r d1r2ra_ A:6-12,177-197,205-210,213-224,227-232 1sq7 d1sq7b_ B:6-12,177-197,205-210,213-224,227-232 1sw7 d1sw7a_ A:6-12,177-197,205-210,213-224,227-232 1sq7 d1sq7a_ A:6-12,177-197,205-210,213-224,227-232 1sw7 d1sw7b_ B:6-12,177-197,205-210,213-224,227-232 1ssd d1ssdb_ B:6-12,177-197,205-210,213-224,227-232 1dkw d1dkwb_ B:6-12,179-199,207-212,215-226,229-238 2btm d2btmb_ B:3-9,178-198,205-210,214-225,228-233 1amk d1amka_ A:6-12,179-199,207-212,215-226,229-234 1sw0 d1sw0a_ A:6-12,177-197,205-210,213-224,227-232 1sux d1suxa_ A:7-13,180-200,208-213,216-227,230-235 1sw3 d1sw3a_ A:6-12,177-197,205-210,213-224,227-232 1tpc d1tpc1_ 1:6-12,177-197,205-210,213-224,227-232 2btm d2btma_ A:3-9,178-198,205-210,214-225,228-233 1tpu d1tpub_ B:6-12,177-197,205-210,213-224,227-232 1tpw d1tpwb_ B:6-12,177-197,205-210,213-224,227-232 1kv5 d1kv5b_ B:6-12,179-199,207-212,215-226,229-234 1tpv d1tpva_ A:6-12,177-197,205-210,213-224,227-232 1trd d1trdb_ B:6-12,179-199,207-212,215-226,229-234 1tpc d1tpc2_ 2:6-12,177-197,205-210,213-224,227-232 1tim d1timb_ B:5-12,177-197,205-210,213-224,227-232 1tpw d1tpwa_ A:6-12,177-197,205-210,213-224,227-232 1n55 d1n55a_ A:6-12,179-199,207-212,215-226,229-234 1tpf d1tpfb_ B:6-12,179-199,207-212,215-226,229-234 1ci1 d1ci1a_ A:7-13,180-200,208-213,216-227,230-235 1tph d1tph1_ 1:6-12,177-197,205-210,213-224,227-232 1dkw d1dkwa_ A:6-12,179-199,207-212,215-226,229-238 1tpb d1tpb1_ 1:6-12,177-197,205-210,213-224,227-232 1tcd d1tcda_ A:7-13,180-200,208-213,216-227,230-235 1tpu d1tpua_ A:6-12,177-197,205-210,213-224,227-232 6tim d6timb_ B:6-12,179-199,207-212,215-226,229-234 1tsi d1tsia_ A:6-12,179-199,207-212,215-226,229-234 1iig d1iiga_ A:6-12,179-199,207-212,215-226,229-234 1tpv d1tpvb_ B:6-12,177-197,205-210,213-224,227-232 1ag1 d1ag1t_ T:6-12,179-199,207-212,215-226,229-234 5tim d5timb_ B:6-12,179-199,207-212,215-226,229-234 1ttj d1ttja_ A:6-12,179-199,207-212,215-226,229-234 3tim d3timb_ B:6-12,179-199,207-212,215-226,229-234 1sw3 d1sw3b_ B:6-12,177-197,205-210,213-224,227-232 1ml1 d1ml1g_ G:6-12,179-199,207-212,215-226,229-234 1ml1 d1ml1e_ E:6-12,179-199,207-212,215-226,229-234 1ml1 d1ml1i_ I:6-12,179-199,207-212,215-226,229-234 4tim d4timb_ B:6-12,179-199,207-212,215-226,229-234 1ml1 d1ml1a_ A:6-12,179-199,207-212,215-226,229-234 1ml1 d1ml1k_ K:6-12,179-199,207-212,215-226,229-234 1tri d1tria_ A:6-12,179-199,207-212,215-226,229-234 1tpb d1tpb2_ 2:6-12,177-197,205-210,213-224,227-232 1mo0 d1mo0a_ A:5-11,176-196,204-209,212-223,226-231 1ml1 d1ml1c_ C:6-12,179-199,207-212,215-226,229-234 2v5l d2v5lb1 B:306-312,479-499,507-512,515-526,529-534 1if2 d1if2a_ A:6-12,179-199,207-212,215-226,229-234 1tph d1tph2_ 2:6-12,177-197,205-210,213-224,227-232 6tim d6tima_ A:6-12,179-199,207-212,215-226,229-234 1tim d1tima_ A:6-12,177-197,205-209,213-224,227-232 3tim d3tima_ A:6-12,179-199,207-212,215-226,229-234 1iih d1iihb_ B:306-312,479-499,507-512,515-526,529-534 1qds d1qdsa_ A:6-12,179-199,207-212,215-226,229-234 1ag1 d1ag1o_ O:6-12,179-199,207-212,215-226,229-234 1mo0 d1mo0b_ B:5-11,176-196,204-209,212-223,226-231 1tti d1ttia_ A:6-12,179-199,207-212,215-226,229-234 1sw0 d1sw0b_ B:6-12,177-197,205-210,213-224,227-232 1iih d1iiha_ A:6-12,179-199,207-212,215-226,229-234 1hti d1htib_ B:6-13,177-197,205-210,213-224,227-232 7tim d7timb_ B:5-11,177-197,205-210,213-224,227-232 1ypi d1ypia_ A:5-11,177-197,205-210,213-223,227-232 7tim d7tima_ A:5-11,177-197,205-210,213-223,227-232 1iig d1iigb_ B:306-312,479-499,507-512,515-526,529-534 1ney d1neyb_ B:5-11,177-197,205-210,213-223,227-232 3ypi d3ypib_ B:5-11,177-197,205-210,213-224,227-232 1mss d1mssa_ A:6-13,179-199,207-212,215-226,229-234 1nf0 d1nf0b_ B:5-11,177-197,205-210,213-224,227-232 3ypi d3ypia_ A:5-11,177-197,205-210,213-223,227-232 1mss d1mssb_ B:6-13,179-199,207-212,215-226,229-234 1ney d1neya_ A:5-11,177-197,205-210,213-224,227-232 1nf0 d1nf0a_ A:5-11,177-197,205-210,213-223,227-232 36. c.1.29 GlpP-like TIM beta/alpha-barrel contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 ! the first seven superfamilies have similar phosphate-binding sites 1vkf d1vkfa_ A:4-10,124-136,138-144,148-159,160-165 1vkf d1vkfd_ D:4-10,124-136,138-144,148-159,160-165 1vkf d1vkfb_ B:4-11,124-136,138-144,148-159,160-165 1vkf d1vkfc_ C:4-11,124-136,138-144,148-159,160-165 39. c.1.25 Monomethylamine methyltransferase MtmB TIM beta/alpha-barrel contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 ! the first seven superfamilies have similar phosphate-binding sites 1tv4 d1tv4a_ A:124-129,308-326,329-337,342-360,362-370 1l2q d1l2qa_ A:124-129,308-327,329-337,342-360,362-370 1tv2 d1tv2a_ A:124-129,308-327,329-337,342-360,362-370 1nth d1ntha_ A:124-129,308-327,329-337,342-360,362-370 1tv3 d1tv3a_ A:124-129,308-327,329-337,342-360,362-370 40. c.1.19 Cobalamin (vitamin B12)-dependent enzymes TIM beta/alpha-barrel contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 ! the first seven superfamilies have similar phosphate-binding sites 1mmf d1mmfl_ L:139-145,312-328,330-334,342-357,359-367 1uc4 d1uc4a_ A:138-144,311-327,328-333,341-356,358-366 1mmf d1mmfa_ A:139-145,312-328,329-334,342-357,359-367 1i9c d1i9cb_ B:61-65,257-280,284-292,300-319,321-325 1i9c d1i9cd_ D:61-65,257-280,284-292,300-319,321-325 1ccw d1ccwd_ D:61-65,257-280,284-292,300-319,321-325 1ccw d1ccwb_ B:61-65,257-280,284-292,300-319,321-325 1cb7 d1cb7b_ B:61-65,257-280,284-292,300-319,321-325 1cb7 d1cb7d_ D:61-65,257-280,284-292,300-319,321-325 1e1c d1e1cd1 D:107-114,289-312,321-327,335-354,356-360 6req d6reqd1 D:107-114,289-312,321-327,335-354,356-360 4req d4reqb1 B:107-114,289-312,321-327,335-354,356-360 4req d4reqd1 D:107-114,289-312,321-327,335-354,356-360 1req d1reqd1 D:107-114,289-312,321-327,335-354,356-360 5req d5reqd1 D:107-114,289-312,321-327,335-354,356-360 6req d6reqb1 B:107-114,289-312,321-327,335-354,356-360 1req d1reqb1 B:107-114,289-312,321-327,335-354,356-360 5req d5reqb1 B:107-114,289-312,321-327,335-354,356-360 1e1c d1e1cb1 B:107-114,289-312,321-327,335-354,356-360 7req d7reqb1 B:107-114,289-312,321-327,335-354,356-360 2req d2reqd1 D:108-114,289-312,321-327,335-354,356-360 7req d7reqd1 D:107-114,289-312,321-327,335-354,356-360 2req d2reqb1 B:108-114,289-312,321-327,335-354,356-360 3req d3reqb1 B:108-114,289-312,321-327,335-354,356-360 4req d4reqc1 C:84-91,293-316,326-332,340-359,361-365 5req d5reqc1 C:84-91,293-316,326-332,340-359,361-365 1e1c d1e1cc1 C:84-91,293-316,326-332,340-359,361-365 1req d1reqa1 A:84-91,293-316,326-332,340-359,361-365 41. c.1.23 FAD-linked oxidoreductase distinct cofactor-binding mode from both FMN- and NAD(P)-linked TIM-barrel oxidoreductases; families are related by a circular permutation ! TIM beta/alpha-barrel contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 ! the first seven superfamilies have similar phosphate-binding sites 2fzm d2fzma2 A:279-287,488-500,508-514,517-524,536-544 1tj2 d1tj2a2 A:279-287,488-500,508-514,517-524,536-544 1tiw d1tiwa2 A:279-287,488-500,508-514,517-524,536-544 1tj1 d1tj1a2 A:279-287,488-500,508-514,517-524,536-544 1v93 d1v93a_ A:13-20,184-199,203-209,242-265,267-272 1b5t d1b5tc_ C:23-30,187-202,206-212,245-268,270-276 1b5t d1b5tb_ B:23-30,187-202,206-212,245-268,270-275 1b5t d1b5ta_ A:23-30,187-202,206-212,245-268,270-275 42. c.1.16 Bacterial luciferase-like consists of clearly related families of somewhat different folds ! TIM beta/alpha-barrel contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 ! the first seven superfamilies have similar phosphate-binding sites 1f07 d1f07a_ A:1-8,174-193,199-206,278-293,295-300 1f07 d1f07d_ D:3001-3008,3174-3193,3199-3206,3278-3293,3295-3300 1f07 d1f07b_ B:1001-1008,1174-1193,1199-1206,1278-1293,1295-1300 1f07 d1f07c_ C:2001-2008,2174-2193,2199-2206,2278-2293,2295-2300 1ezw d1ezwa_ A:4-11,199-218,224-231,303-318,320-325 1m41 d1m41b_ B:1002-1008,1199-1218,1221-1232,1307-1322,1323-1330 1nqk d1nqka_ A:2-9,200-219,222-233,308-323,325-331 1m41 d1m41a_ A:1-8,199-218,221-232,307-322,324-330 1bsl d1bslb_ B:1-8,197-216,223-233,275-291,293-299 1bsl d1bsla_ A:1-8,197-216,223-233,275-291,293-299 1rhc d1rhca_ A:3-10,196-216,223-233,286-301,303-311 1brl d1brld_ D:1-8,197-216,223-233,275-291,293-299 1brl d1brlb_ B:1-8,197-216,223-233,275-291,293-299