List of the counted superfamily hits for pattern ID: 1106 (enumeration index: query2480) of S5

List of the counted superfamily hits for pattern ID: 1106 (enumeration index: query2480) of S5

SCOP superfamily ID superfamiily description corresponding fold description
d.153.1N-terminal nucleophile aminohydrolases (Ntn hydrolases) N-terminal residue provides two catalytic groups, nucleophile and proton donor ! Ntn hydrolase-like 4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
d.153.2Archaeal IMP cyclohydrolase PurO has a putative active site in the same topological location as the Ntn hydrolase but lacks the N-terminal nucleophile ! Ntn hydrolase-like 4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
d.17.4NTF2-like has a beta-alpha(2)-beta insertion after the main helix ! Cystatin-like Core: alpha-beta(4); helix packs against coiled antiparallel beta-sheet
d.96.2ApbE-like duplication: contains two differently decorated beta(2)-alpha(2)-beta(2) subdomains, similar to other T-fold domains; probably does not form the tunnel-shaped oligomers ! T-fold beta(2)-alpha(2)-beta(2); 2 layers: alpha/beta; antiparallel sheet 1234 ! tunnel-shaped: its known members form wide oligomeric barrels different sizes
b.2.6Cytochrome f, large domain Common fold of diphtheria toxin/transcription factors/cytochrome f sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold
d.219.1PP2C-like contain binuclear metal (Mn) centre ! PP2C-like 4 layers: alpha/beta/beta/alpha; antiparallel beta sheets
d.338.1Oxysterol-binding protein-like Oxysterol-binding protein-like core: large meander beta-sheet of 12 strands wrapped around the N-terminal (distorted) alpha-hairpin; some similarity to transmembrane beta-barrel proteins
e.66.1Api92-like Api92-like 2 domains; d1: [alpha+beta with similarity to ferredoxin-like fold]; d2: [6 helices, bundle, one buried central helix], inserted into d1