1. b.147.1 BTV NS2-like ssRNA-binding domain
BTV NS2-like ssRNA-binding domain sandwich; 9 strands in 2 sheets; unusual topology with 2 crossover loops
1uty d1utyb_ B:9-16,33-40,53-60,99-107,116-124
1uty d1utya_ A:9-16,33-40,53-60,101-107,116-124
2. c.55.1 Actin-like ATPase domain duplication contains two domains of this fold !
Ribonuclease H-like motif 3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
2e1z d2e1za2 A:195-205,207-215,319-325,361-367,372-378
1x3n d1x3na1 A:195-205,207-215,319-325,361-367,372-378
1glj d1gljo1 O:4-13,14-23,73-82,220-228,236-244
1bu6 d1bu6z1 Z:4-13,14-23,73-82,220-228,236-244
1x3m d1x3ma1 A:197-205,207-215,319-325,361-365,372-378
1bu6 d1bu6o1 O:4-13,14-23,73-82,220-228,236-244
1glf d1glfy1 Y:4-13,14-23,73-82,220-228,236-244
1bwf d1bwfy1 Y:3-13,14-23,72-82,220-229,235-244
1g99 d1g99b2 B:200-210,212-220,324-330,364-368,375-381
1tuy d1tuya1 A:1-10,11-21,86-93,101-105,142-148
2e20 d2e20a2 A:195-205,207-215,319-325,361-365,372-378
1bu6 d1bu6x1 X:4-13,14-23,73-82,220-228,236-244
1bu6 d1bu6y1 Y:4-13,14-23,73-82,220-228,236-244
1glc d1glcg1 G:4-13,14-23,73-82,220-227,237-244
1glf d1glfz1 Z:4-13,14-23,73-82,220-228,236-244
1glj d1gljy1 Y:4-13,14-23,73-82,220-229,235-244
2e1y d2e1ya2 A:197-205,207-215,319-325,361-365,372-378
1g99 d1g99a2 A:202-210,212-220,324-330,365-370,375-380
1g99 d1g99a1 A:1-10,11-21,86-93,101-105,142-148
1gll d1glly1 Y:4-13,14-23,73-82,220-229,235-244
1gle d1gleg1 G:4-13,14-23,73-82,220-227,237-244
1tuu d1tuua1 A:1-10,11-21,86-93,101-105,142-148
1saz d1saza1 A:2-11,12-21,69-74,84-88,122-128
1tuu d1tuub2 B:200-210,212-220,324-330,364-368,375-381
1gla d1glag1 G:4-13,14-23,73-82,220-227,237-244
1tuy d1tuyb2 B:200-210,212-220,324-330,365-370,375-380
1tuu d1tuua2 A:202-210,212-220,324-330,365-370,375-380
1gld d1gldg1 G:4-13,14-23,73-82,220-227,237-244
1tuy d1tuya2 A:200-210,212-220,324-330,365-370,375-380
1t6c d1t6ca2 A:136-143,145-154,204-210,232-237,289-293
1x9j d1x9jb1 B:2-11,12-21,69-74,84-88,122-128
1x9j d1x9jh1 H:2-11,12-21,69-74,84-88,122-128
1x9j d1x9jd1 D:2-11,12-21,69-74,84-88,122-128
1x9j d1x9jf1 F:2-11,12-21,69-74,84-88,122-128
1gll d1gllo1 O:4-13,14-23,73-82,220-229,235-244
1t6d d1t6da2 A:136-143,145-154,204-210,232-237,289-293
1bo5 d1bo5o1 O:4-13,14-23,75-82,220-228,236-244
1glf d1glfx1 X:4-13,14-23,75-82,220-228,236-244
1bwf d1bwfo1 O:4-13,14-23,73-82,220-229,235-244
1t6d d1t6db2 B:136-143,145-154,204-210,232-237,289-293
2j4r d2j4rb2 B:136-143,145-154,204-210,232-237,289-293
2j4r d2j4ra2 A:136-144,145-154,204-210,232-237,289-293
1bo5 d1bo5z1 Z:4-13,14-23,75-82,220-228,236-244
1x9j d1x9jg1 G:2-11,12-21,69-74,84-88,123-128
1x9j d1x9je1 E:2-11,12-21,69-74,84-88,123-128
1x9j d1x9ja1 A:2-11,12-21,69-74,84-88,123-128
1x9j d1x9jc1 C:2-11,12-21,69-74,84-88,123-128
1r59 d1r59o1 O:5-14,15-23,74-83,221-229,230-245
2fsn d2fsna2 A:1-10,11-18,100-109,125-134,136-151
1glf d1glfo1 O:4-13,14-23,73-82,220-228,239-244
2fsj d2fsja2 A:1-10,11-18,99-109,125-134,136-144
2fsk d2fska2 A:1-10,11-18,99-109,125-134,136-144
2fsk d2fskb2 B:1-10,11-18,99-109,125-134,136-144
3. d.112.1 Phoshotransferase/anion transport protein
Phoshotransferase/anion transport protein beta-alpha(2)-beta(3)-alpha(3); 3 layers, alpha/beta/alpha; mixed sheet: order 1342; loop crossing
1hyn d1hynp_ P:58-69,70-82,225-235,239-248,261-271
1hyn d1hyns_ S:58-69,70-82,225-235,239-248,261-271
1hyn d1hynq_ Q:57-69,70-82,225-235,239-247,261-271
1hyn d1hynr_ R:56-69,70-82,224-236,239-248,261-271
4. c.55.3 Ribonuclease H-like consists of one domain of this fold !
Ribonuclease H-like motif 3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
2pyj d2pyjb1 B:7-16,23-32,55-62,98-111,112-123
2pyj d2pyja1 A:7-16,23-32,55-62,98-111,112-123
2pzs d2pzsa1 A:7-16,23-32,55-62,98-111,112-123
1xhz d1xhza1 A:7-16,23-32,55-62,98-111,112-123
2ex3 d2ex3g1 G:7-16,23-32,55-62,98-111,112-123
2ex3 d2ex3c1 C:7-16,23-32,55-62,98-111,112-123
2ex3 d2ex3k1 K:7-16,23-32,55-62,98-111,112-123
1xhx d1xhxa1 A:7-16,23-32,55-62,98-111,112-123
2ex3 d2ex3a1 A:7-16,23-32,55-62,98-111,112-123
2ex3 d2ex3e1 E:7-16,23-32,55-62,98-111,112-123
2ex3 d2ex3i1 I:7-16,23-32,55-62,98-111,112-123
2pzs d2pzsd1 D:7-18,21-32,55-62,98-111,112-123
2pzs d2pzsb1 B:7-18,21-32,55-62,98-111,112-123
2pzs d2pzsc1 C:7-18,21-32,55-62,98-111,112-123
2pyl d2pyla1 A:7-18,21-32,55-62,98-111,112-123
2py5 d2py5b1 B:7-18,21-32,55-62,98-111,112-123
2py5 d2py5a1 A:7-18,21-32,55-62,98-111,112-123
1xi1 d1xi1a1 A:7-18,21-32,55-62,98-111,112-123
5. d.92.1 Metalloproteases ("zincins"), catalytic domain
Zincin-like contains mixed beta sheet with connection over free side of the sheet
1bqb d1bqba_ A:34-45,46-52,94-102,113-119,120-126
List of motif hits that are not present in SCOP but are found in PDB for pattern ID: 328 (enumeration index: query2666) of S5
3p4i A:192-200,202-210,313-319,354-358,365-371
3p4i B:192-200,202-210,313-319,354-358,365-371
3h45 O:5-14,15-24,74-83,221-229,237-245
3h45 D:5-14,15-24,76-83,221-228,238-245
3h45 C:5-14,15-24,74-83,221-229,237-245
3r1x A:3-12,13-22,59-65,92-96,98-102
3r1x D:2-12,13-22,59-66,92-96,98-102
3r1x C:3-11,13-22,59-65,92-96,98-102
3qdk A:5-14,15-25,86-95,247-253,264-270
3qdk C:5-14,15-25,86-95,247-252,266-270
3qdk B:5-14,15-25,87-95,247-252,266-270
3qdk D:5-14,15-25,87-95,247-253,264-270
2cgj A:3-12,14-26,75-82,213-222,226-233
2uyt A:3-12,14-26,75-82,213-222,226-233
3d7e O:5-14,15-24,75-83,221-229,237-245
3d7e X:5-14,15-24,75-83,221-229,237-245
3g25 A:3-12,13-22,72-81,219-227,235-243
3g25 B:3-12,13-22,72-81,219-227,235-243
3g25 C:3-12,13-22,72-81,219-227,235-243
3g25 D:3-12,13-22,72-81,219-227,235-243
3ezw H:4-13,14-23,73-82,220-228,236-244
3ezw E:4-13,14-23,73-82,220-228,236-244
3ezw B:4-13,14-23,73-82,220-228,236-244
3ezw G:4-13,14-23,73-82,220-228,236-244
3ezw D:4-13,14-23,73-82,220-228,236-244
3ezw C:4-13,14-23,73-82,220-228,236-244
3ezw A:4-13,14-23,73-82,220-227,237-244
3ezw F:4-13,14-23,73-82,220-228,236-244
3r9p A:191-199,201-209,312-318,353-357,364-370
3r9p B:191-199,201-209,312-318,353-357,364-370
3flc O:5-14,15-24,74-83,221-229,237-245
3flc X:5-14,15-24,74-83,221-229,237-245
3hi0 B:138-147,149-158,206-212,234-239,289-294
3hi0 A:139-148,149-158,204-212,234-239,289-294
2nlx B:1-8,10-19,69-76,207-212,225-229
2nlx A:1-9,10-19,69-76,207-212,225-229
3h3o X:5-14,15-24,74-83,221-231,235-245
3h3o O:5-14,15-24,75-83,221-231,235-245
3h3o C:6-14,15-24,75-83,226-231,235-245
3h3o B:5-14,15-24,74-83,221-229,237-245
3mdq A:128-138,140-149,204-209,234-239,290-295
2cgl A:3-12,14-26,75-82,213-222,226-233
3ifr A:7-15,17-26,77-85,218-223,237-241
3ifr B:7-15,17-26,78-85,218-223,237-241
3kzb A:3-12,13-22,71-80,214-219,233-237
2vqx A:60-69,74-80,119-125,132-137,138-143
3h46 X:5-14,15-24,74-83,221-229,237-245
3h46 O:5-14,15-24,74-83,221-229,237-245
2zf5 Y:3-12,13-22,72-81,215-225,228-238
2zf5 O:3-12,13-22,72-81,220-225,228-238
2hz6 A:194-201,204-212,242-246,280-290,291-301
2itm A:1-8,10-19,69-76,207-212,225-229
2itm B:1-8,10-18,69-76,207-212,225-229
2obe C:131-137,145-154,202-210,245-254,264-271
2obe A:131-137,145-154,202-210,245-254,264-271
2obe B:131-137,145-154,202-210,245-254,264-271
3hz6 A:3-12,13-22,71-80,214-220,231-237
2w41 B:-1-11,12-21,70-82,220-228,236-245
2w41 A:-2-11,12-21,70-82,220-228,236-245
2w40 D:0-11,12-21,71-82,220-228,236-245
2w40 C:0-11,12-21,71-82,220-227,238-245
2w40 A:1-11,12-21,72-82,220-228,236-245
2w40 B:0-11,12-21,71-82,220-227,238-245
3h6e A:6-12,14-23,68-75,204-209,223-227
3h6e B:5-12,14-23,68-75,204-209,223-227
3h3n X:5-14,15-24,74-83,221-229,237-245
2iir A:199-209,211-219,324-330,367-372,377-382
2iir E:199-209,211-219,324-330,367-372,377-382
2iir F:199-209,211-219,324-330,367-372,377-382
2iir C:199-209,211-219,324-330,367-372,377-382
2iir J:199-209,211-219,324-330,367-372,377-382
2iir B:199-209,211-219,324-330,367-372,377-382
2iir G:199-209,211-219,324-330,367-372,377-382
2iir I:199-209,211-219,324-330,367-372,377-382
2iir H:199-209,211-219,324-330,367-372,377-382
2iir D:199-209,211-219,324-330,367-372,377-382
2dpn B:3-11,12-21,73-80,218-228,237-241
2dpn B:3-11,12-21,73-80,218-228,231-238
2dpn A:3-11,12-21,73-80,218-228,231-241
3ge1 B:3-12,13-22,72-81,219-227,235-243
3ge1 C:3-12,13-22,72-81,219-227,235-243
3ge1 A:3-12,13-22,72-81,219-227,235-243
3ge1 D:3-12,13-22,72-81,219-227,235-243
3cer C:146-155,156-165,226-232,254-259,320-324
3cer B:146-155,156-165,226-232,254-259,320-324
3cer E:146-155,156-165,226-232,254-259,320-324
3cer D:146-155,156-165,226-232,254-259,320-324
3cer A:146-155,156-165,226-232,254-259,320-324
3khy B:193-202,204-212,315-321,355-359,364-368
3khy A:193-202,204-212,315-321,355-359,364-368
3liu A:34-44,89-97,159-164,167-175,176-185
3liu B:34-44,89-100,159-164,167-175,176-185
3jyg E:13-17,35-51,76-83,107-112,130-134
3jyg F:13-17,35-51,76-83,107-112,130-134
3jyg B:13-17,35-51,76-83,107-112,130-134
3jyg C:13-17,35-51,76-83,107-112,130-134
3jyg D:13-17,35-51,76-83,107-112,130-134
3jyg A:13-17,35-51,76-83,107-112,130-134
2cgk A:2-12,14-26,75-82,213-222,226-233
2cgk B:2-12,14-26,75-82,213-222,226-233
1xhx D:7-18,21-32,55-62,98-111,112-123
1xhx C:7-16,23-32,56-62,98-111,112-123
1xhx B:7-16,23-32,55-61,98-111,112-122
1xi1 B:7-18,21-32,55-62,98-111,112-123
1xhz D:7-18,21-32,55-62,98-111,112-123
1xhz C:7-16,23-32,55-61,98-111,112-122
1xhz B:7-16,23-32,55-62,98-111,112-123