List of the counted superfamily hits for pattern ID: 523 (enumeration index: query276) of S5

List of the counted superfamily hits for pattern ID: 523 (enumeration index: query276) of S5

SCOP superfamily ID superfamiily description corresponding fold description
d.281.1Hemolytic lectin CEL-III, C-terminal domain Hemolytic lectin CEL-III, C-terminal domain unusual fold
d.342.1PH1570-like PH1570-like duplication: two beta(4)-alpha structural repeats, related by pseudo twofold symmetry; two extra helices in the linker region; single 8-standed antiparallel beta-sheet, order: 12348765
c.72.2MurD-like peptide ligases, catalytic domain has extra strand located between strands 1 and 2 ! Ribokinase-like core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest ! potential superfamily: members of this fold have similar functions but different ATP-binding sites
c.72.1Ribokinase-like has extra strand located between strands 2 and 3 ! Ribokinase-like core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest ! potential superfamily: members of this fold have similar functions but different ATP-binding sites
d.87.1FAD/NAD-linked reductases, dimerisation (C-terminal) domain both first two domains are of same beta/beta/alpha fold ! CO dehydrogenase flavoprotein C-domain-like core: beta(3,4)-alpha(3); alpha+beta sandwich
d.303.1BB1717-like BB1717-like complex fold with a bifurcated beta-sheet structure surrounded by helices; contains beta-sheet barrel, closed (n=5, S=8)
d.214.1Hypothetical protein MTH1880 Hypothetical protein MTH1880 beta-alpha-beta(2)-alpha(2); 3 layers, alpha/beta/alpha; antiparallel beta-sheet: order 123
d.110.4SNARE-like beta(2)-alpha-beta(3)-alpha(2) ! Profilin-like core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha
d.260.1Suppressor of Fused, N-terminal domain Suppressor of Fused, N-terminal domain unusual fold; bifurcated beta-sheet; left-handed beta-alpha-beta unit
b.82.4Regulatory protein AraC Double-stranded beta-helix one turn of helix is made by two pairs of antiparallel strands linked with short turns ! has appearance of a sandwich of distinct architecture and jelly-roll topology
d.35.1Heme-binding protein A (HasA) Heme-binding protein A (HasA) beta-alpha-beta(6)-alpha(2); antiparallel sheet: order 165432
d.96.2ApbE-like duplication: contains two differently decorated beta(2)-alpha(2)-beta(2) subdomains, similar to other T-fold domains; probably does not form the tunnel-shaped oligomers ! T-fold beta(2)-alpha(2)-beta(2); 2 layers: alpha/beta; antiparallel sheet 1234 ! tunnel-shaped: its known members form wide oligomeric barrels different sizes
f.10.1Viral glycoprotein, central and dimerisation domains Viral glycoprotein, central and dimerisation domains 2 intertwined domains; all-beta and alpha+beta
d.165.1Ribosome inactivating proteins (RIP) Ribosome inactivating proteins (RIP) contains mixed beta-sheet
d.153.2Archaeal IMP cyclohydrolase PurO has a putative active site in the same topological location as the Ntn hydrolase but lacks the N-terminal nucleophile ! Ntn hydrolase-like 4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
d.232.1Mago nashi protein Mago nashi protein beta(4)-alpha-beta(2)-alpha; 2 layers: alpha/beta; antiparallel beta-sheet, order: 651234