1. b.40.2 Bacterial enterotoxins
OB-fold barrel, closed or partly opened n=5, S=10 or S=8; greek-key
2bos d2bosc_ C:309-316,318-325,326-332,333-347,349-354
2bos d2bosa_ A:109-116,118-125,126-132,133-147,149-154
2bos d2bosd_ D:409-416,418-425,426-432,433-447,449-454
1qoh d1qohc_ C:309-316,318-325,326-332,333-347,349-354
1qoh d1qohm_ M:309-316,318-325,326-332,333-347,349-354
1qoh d1qohb_ B:209-216,218-225,226-232,233-247,249-254
1qoh d1qohj_ J:509-516,518-525,526-532,533-547,549-554
1qoh d1qohe_ E:509-516,518-525,526-532,533-547,549-554
1qoh d1qohi_ I:409-416,418-425,426-432,433-447,449-454
1qoh d1qohd_ D:409-416,418-425,426-432,433-447,449-454
1qoh d1qoho_ O:509-516,518-525,526-532,533-547,549-554
1qoh d1qohk_ K:109-116,118-125,126-132,133-147,149-154
1qoh d1qohq_ Q:209-216,218-225,226-232,233-247,249-254
1qoh d1qohh_ H:309-316,318-325,326-332,333-347,349-354
1qoh d1qohg_ G:209-216,218-225,226-232,233-247,249-254
1qoh d1qohr_ R:309-316,318-325,326-332,333-347,349-354
1qoh d1qoht_ T:509-516,518-525,526-532,533-547,549-554
2bos d2bosb_ B:209-216,219-225,226-232,233-247,249-254
2bos d2bose_ E:509-516,519-525,526-532,533-547,549-554
1qoh d1qohf_ F:109-116,119-125,126-132,133-147,149-154
1qoh d1qoha_ A:109-116,119-125,126-132,133-147,149-154
1qoh d1qohl_ L:209-216,219-225,226-232,233-247,249-254
1c48 d1c48d_ D:409-416,418-425,426-432,433-447,449-454
1qoh d1qohn_ N:409-416,419-425,426-432,433-447,449-454
1qoh d1qohp_ P:109-116,119-125,126-132,133-147,149-154
1qoh d1qohs_ S:409-416,419-425,426-432,433-447,449-454
1c48 d1c48b_ B:209-216,218-225,226-232,233-247,249-254
1c48 d1c48a_ A:109-116,118-125,126-132,133-147,149-154
1r4q d1r4qc_ C:9-16,18-25,26-32,33-47,49-54
1c4q d1c4qc_ C:309-316,318-325,326-332,333-347,349-354
1r4p d1r4pc_ C:8-15,17-24,25-31,32-46,47-53
1c4q d1c4qa_ A:109-116,118-125,126-132,133-147,149-154
1czw d1czwc_ C:309-316,318-325,326-332,333-347,349-354
1czw d1czwf_ F:109-116,118-125,126-132,133-147,149-154
1czw d1czwd_ D:409-416,418-425,426-432,433-447,449-454
1czw d1czwa_ A:109-116,118-125,126-132,133-147,149-154
1czw d1czwg_ G:209-216,218-225,226-232,233-247,249-254
1czw d1czwh_ H:309-316,318-325,326-332,333-347,349-354
1czw d1czwe_ E:509-516,518-525,526-532,533-547,549-554
1czw d1czwb_ B:209-216,218-225,226-232,233-247,249-254
1czw d1czwi_ I:409-416,418-425,426-432,433-447,449-454
1czw d1czwj_ J:509-516,518-525,526-532,533-547,549-554
1dm0 d1dm0d_ D:9-16,18-25,26-32,33-47,49-54
1c4q d1c4qe_ E:509-516,518-525,526-532,533-547,549-554
1r4q d1r4qh_ H:9-16,18-25,26-32,33-47,49-54
2ga4 d2ga4b1 B:8-15,17-24,25-31,32-46,47-53
1r4p d1r4pf_ F:8-15,17-24,25-31,32-46,47-53
1r4p d1r4pd_ D:8-15,18-24,25-31,32-46,47-53
1c4q d1c4qd_ D:409-416,418-425,426-432,433-447,449-454
1r4q d1r4qg_ G:9-16,18-25,26-32,33-47,49-54
1r4q d1r4qe_ E:9-16,18-25,26-32,33-47,49-54
2ga4 d2ga4c1 C:8-15,17-24,25-31,32-46,47-53
1dm0 d1dm0c_ C:9-16,18-25,26-32,33-47,49-54
1c4q d1c4qb_ B:209-216,218-225,226-232,233-247,249-254
1d1k d1d1ka_ A:109-116,118-125,126-132,133-147,149-154
1r4p d1r4pe_ E:8-15,17-24,25-31,32-46,47-53
1d1k d1d1kd_ D:409-416,418-425,426-432,433-447,449-454
2ga4 d2ga4f1 F:8-15,18-24,25-31,32-46,47-53
1d1k d1d1kc_ C:309-316,318-325,326-332,333-347,349-354
1d1k d1d1ke_ E:509-516,518-525,526-532,533-547,549-554
1d1k d1d1kb_ B:209-216,218-225,226-232,233-247,249-254
1d1i d1d1ic_ C:309-316,318-325,326-332,333-347,349-354
1c48 d1c48e_ E:509-516,518-525,526-532,533-547,549-554
1d1i d1d1ia_ A:109-116,118-125,126-132,133-147,149-154
1r4q d1r4qk_ K:9-16,18-25,26-32,33-47,49-54
1r4p d1r4pb_ B:8-15,18-24,25-31,32-46,47-53
1d1i d1d1ie_ E:509-516,518-525,526-532,533-547,549-554
1c48 d1c48c_ C:309-316,318-325,326-332,333-347,349-354
1d1i d1d1ib_ B:209-216,218-225,226-232,233-247,249-254
1d1i d1d1id_ D:409-416,418-425,426-432,433-447,449-454
1czg d1czge_ E:509-516,518-525,526-532,533-547,549-554
1czg d1czgd_ D:409-416,418-425,426-432,433-447,449-454
1dm0 d1dm0k_ K:9-16,18-25,26-32,33-47,49-54
1czg d1czga_ A:109-116,118-125,126-132,133-147,149-154
1czg d1czgc_ C:309-316,318-325,326-332,333-347,349-354
1dm0 d1dm0b_ B:9-16,18-25,26-32,33-47,49-54
1czg d1czgb_ B:209-216,218-225,226-232,233-247,249-254
2ga4 d2ga4d1 D:8-15,17-24,25-31,32-46,47-53
1r4q d1r4qd_ D:9-16,18-25,26-32,33-47,49-54
1r4q d1r4qb_ B:9-16,18-25,26-32,33-47,49-54
1qnu d1qnud_ D:409-416,418-425,426-432,433-447,449-454
1qnu d1qnue_ E:509-516,518-525,526-532,533-547,549-554
1qnu d1qnub_ B:209-216,218-225,226-232,233-247,249-254
1qnu d1qnua_ A:109-116,118-125,126-132,133-147,149-154
1qnu d1qnuc_ C:309-316,318-325,326-332,333-347,349-354
2c5c d2c5cf1 F:9-16,18-25,26-32,33-47,49-54
1cqf d1cqfb_ B:209-216,218-225,226-232,233-247,249-254
2c5c d2c5cj1 J:9-16,18-25,26-32,33-47,49-54
2c5c d2c5cb1 B:9-16,18-25,26-32,33-47,49-54
1cqf d1cqfa_ A:109-116,118-125,126-132,133-147,149-154
2c5c d2c5ci1 I:9-16,18-25,26-32,33-47,49-54
2ga4 d2ga4e1 E:8-15,18-24,25-31,32-46,47-53
2c5c d2c5ch1 H:9-16,18-25,26-32,33-47,49-54
2c5c d2c5cg1 G:9-16,18-25,26-32,33-47,49-54
1cqf d1cqfc_ C:309-316,318-325,326-332,333-347,349-354
2c5c d2c5cc1 C:9-16,18-25,26-32,33-47,49-54
1cqf d1cqfd_ D:409-416,418-425,426-432,433-447,449-454
2c5c d2c5ce1 E:9-16,18-25,26-32,33-47,49-54
2c5c d2c5cd1 D:9-16,18-25,26-32,33-47,49-54
1bos d1bosc_ C:1309-1316,1318-1325,1326-1332,1333-1347,1349-1354
1bos d1bosj_ J:2509-2516,2518-2525,2526-2532,2533-2547,2549-2554
1cqf d1cqfe_ E:509-516,518-525,526-532,533-547,549-554
1bos d1bosf_ F:2109-2116,2118-2125,2126-2132,2133-2147,2149-2154
1bos d1bost_ T:4509-4516,4518-4525,4526-4532,4533-4547,4549-4554
1bos d1bosq_ Q:4209-4216,4218-4225,4226-4232,4233-4247,4249-4254
1bos d1bosb_ B:1209-1216,1218-1225,1226-1232,1233-1247,1249-1254
1bos d1bosk_ K:3109-3116,3118-3125,3126-3132,3133-3147,3149-3154
1bos d1bosh_ H:2309-2316,2318-2325,2326-2332,2333-2347,2349-2354
1bos d1bosp_ P:4109-4116,4118-4125,4126-4132,4133-4147,4149-4154
1bos d1bosr_ R:4309-4316,4318-4325,4326-4332,4333-4347,4349-4354
1bos d1bosa_ A:1109-1116,1118-1125,1126-1132,1133-1147,1149-1154
1bos d1bosn_ N:3409-3416,3418-3425,3426-3432,3433-3447,3449-3454
2c5c d2c5ca1 A:9-16,18-25,26-32,33-47,49-54
1bos d1bosg_ G:2209-2216,2218-2225,2226-2232,2233-2247,2249-2254
1bos d1bose_ E:1509-1516,1518-1525,1526-1532,1533-1547,1549-1554
1bos d1boso_ O:3509-3516,3518-3525,3526-3532,3533-3547,3549-3554
1bos d1bosi_ I:2409-2416,2418-2425,2426-2432,2433-2447,2449-2454
1bos d1bosl_ L:3209-3216,3218-3225,3226-3232,3233-3247,3249-3254
1bos d1bosd_ D:1409-1416,1418-1425,1426-1432,1433-1447,1449-1454
1bos d1boss_ S:4409-4416,4418-4425,4426-4432,4433-4447,4449-4454
1bos d1bosm_ M:3309-3316,3318-3325,3326-3332,3333-3347,3349-3354
1dm0 d1dm0g_ G:9-16,19-25,26-32,33-47,49-54
1r4q d1r4qj_ J:9-16,18-25,26-32,33-47,49-54
1r4q d1r4qf_ F:9-16,18-25,26-31,33-47,49-54
1r4q d1r4qi_ I:9-16,18-25,26-32,33-47,49-54
1dm0 d1dm0j_ J:9-16,19-25,26-32,33-47,49-54
1dm0 d1dm0e_ E:9-16,19-25,26-32,33-47,49-54
1dm0 d1dm0i_ I:9-16,19-25,26-32,33-47,49-54
1dm0 d1dm0h_ H:9-16,19-25,26-32,33-47,49-54
1dm0 d1dm0f_ F:9-16,18-25,26-31,33-47,49-55
2aq1 d2aq1f1 F:40-45,47-55,62-68,70-80,81-87
1ha5 d1ha5d1 D:4038-4042,4044-4053,4056-4062,4064-4074,4075-4081
1b1z d1b1zc1 C:38-42,44-53,56-62,64-74,75-81
2aq3 d2aq3b1 B:40-45,47-55,62-68,70-80,81-87
2aq2 d2aq2b1 B:40-45,47-55,62-68,70-80,81-87
2aq1 d2aq1h1 H:41-45,47-55,62-68,70-80,81-87
2aq1 d2aq1d1 D:40-45,47-55,62-68,70-80,81-87
1cqv d1cqva1 A:40-45,47-55,62-68,70-80,81-87
2aq3 d2aq3f1 F:40-44,47-55,62-68,70-80,81-87
1uup d1uupa1 A:1037-1041,1044-1053,1056-1062,1064-1074,1075-1081
2aq3 d2aq3h1 H:40-45,47-55,62-68,70-80,81-87
1l0y d1l0yb1 B:38-42,44-53,56-62,64-74,75-81
1l0y d1l0yd1 D:38-42,44-53,56-62,64-74,75-81
1fnw d1fnwg1 G:1837-1842,1844-1853,1856-1862,1864-1874,1875-1881
1uup d1uupc1 C:3037-3041,3044-3053,3056-3062,3064-3074,3075-3081
1fnw d1fnwf1 F:1537-1542,1544-1553,1556-1562,1564-1574,1575-1581
2aq1 d2aq1b1 B:40-44,47-55,62-68,70-80,81-87
1fnw d1fnwc1 C:637-641,644-653,656-662,664-674,675-681
1jwu d1jwud1 D:41-45,47-57,62-68,70-80,81-87
1fnv d1fnvb1 B:337-341,344-353,356-362,364-374,375-381
1klg d1klgd1 D:40-45,47-57,62-68,70-80,81-87
1fnw d1fnwa1 A:37-41,44-53,56-62,64-74,75-81
1pyw d1pywd1 D:40-44,47-57,62-68,70-80,81-87
1d5z d1d5zc1 C:40-44,47-57,62-68,70-80,81-87
1d5m d1d5mc1 C:40-44,47-57,62-68,70-80,81-87
2ipk d2ipkd1 D:40-44,47-57,62-68,70-80,81-87
1sje d1sjed1 D:40-44,47-57,62-68,70-80,81-87
4ull d4ulla_ A:9-16,19-24,27-32,35-47,49-55
1i4r d1i4ra1 A:40-44,47-57,62-68,70-80,81-87
1bxt d1bxta1 A:40-44,47-57,62-68,70-80,81-87
1bxt d1bxtb1 B:40-44,47-57,62-68,70-80,81-87
1i4q d1i4qa1 A:40-45,47-57,62-68,70-80,81-87
1i4p d1i4pa1 A:40-45,47-57,62-68,70-80,81-87
2. b.40.1 Staphylococcal nuclease
OB-fold barrel, closed or partly opened n=5, S=10 or S=8; greek-key
1joq d1joqa_ A:15-19,21-28,29-36,57-69,71-76
1stg d1stga_ A:15-19,21-28,29-36,54-70,71-76
1joo d1jooa_ A:15-19,21-28,29-36,54-70,71-76
2snm d2snma_ A:15-19,21-28,29-36,54-69,71-76
1enc d1enca_ A:15-19,21-28,29-36,52-70,71-76
1ez6 d1ez6a_ A:15-19,21-28,29-36,54-69,71-76
1snc d1snca_ A:15-19,21-28,29-36,54-69,71-76
1snq d1snqa_ A:15-19,21-28,29-36,54-69,71-76
1u9r d1u9ra_ A:15-19,21-28,29-36,54-69,71-76
1snm d1snma_ A:15-19,21-28,29-36,54-69,71-76
1ena d1enaa_ A:15-19,21-28,29-36,52-69,71-76
2enb d2enba_ A:15-19,21-28,29-36,54-69,71-76
1a2t d1a2ta_ A:15-19,21-28,29-36,54-69,71-76
1snp d1snpa_ A:15-19,21-28,29-36,54-69,71-76
1eyc d1eyca_ A:15-19,21-28,29-36,54-69,71-76
1ii3 d1ii3a_ A:15-19,21-28,29-36,54-69,71-76
1aex d1aexa_ A:15-19,21-28,29-36,54-69,71-76
1a2u d1a2ua_ A:15-19,21-28,29-36,54-69,71-76
1syd d1syda_ A:15-19,21-28,29-36,54-69,71-76
1kdb d1kdba_ A:15-19,21-28,29-36,54-69,71-76
1syg d1syga_ A:15-19,21-28,29-36,54-69,71-76
1ey5 d1ey5a_ A:15-19,21-28,29-36,54-69,71-76
1sno d1snoa_ A:15-19,21-28,29-36,54-69,71-76
1ihz d1ihza_ A:15-19,21-28,29-36,54-69,71-76
1ey0 d1ey0a_ A:15-19,21-28,29-36,54-69,71-76
1eya d1eyaa_ A:15-19,21-28,29-36,52-69,71-76
1kdc d1kdca_ A:15-19,21-28,29-36,54-69,71-76
1kab d1kaba_ A:15-19,21-28,29-36,54-69,71-76
1kda d1kdaa_ A:15-19,21-28,29-36,54-69,71-76
1tt2 d1tt2a_ A:15-19,21-28,29-36,54-69,71-76
1ey4 d1ey4a_ A:15-19,21-28,29-36,54-69,71-76
1ey7 d1ey7a_ A:15-19,21-28,29-36,54-69,71-76
1f2m d1f2ma_ A:15-19,21-28,29-36,54-69,71-76
3nuc d3nuca_ A:15-19,21-28,29-36,54-69,71-76
1jor d1jora_ A:15-19,21-28,29-36,54-70,71-76
1f2z d1f2za_ A:15-19,21-28,29-36,54-69,71-76
1ey9 d1ey9a_ A:15-19,21-28,29-36,52-69,71-76
1ey8 d1ey8a_ A:15-19,21-28,29-36,52-69,71-76
1syc d1syca_ A:15-19,21-28,29-36,52-69,71-76
1sye d1syea_ A:15-19,21-28,29-36,52-69,71-76
1ez8 d1ez8a_ A:15-19,21-28,29-36,52-69,71-76
1eyd d1eyda_ A:15-19,21-28,29-36,52-69,71-76
2nuc d2nuca_ A:15-19,21-28,29-36,52-69,71-76
1sth d1stha_ A:15-19,21-28,29-36,52-69,71-76
1ey6 d1ey6a_ A:15-19,21-28,29-36,52-69,71-76
1eqv d1eqva_ A:15-19,21-28,29-36,52-69,71-76
1sty d1stya_ A:15-19,21-28,29-36,52-69,71-76
1a3t d1a3ta_ A:15-19,21-28,29-36,52-69,71-76
1stn d1stna_ A:15-19,21-28,29-36,52-69,71-76
1syf d1syfa_ A:15-19,21-28,29-36,52-69,71-76
5nuc d5nuca_ A:15-19,21-28,29-36,54-69,71-76
1f2y d1f2ya_ A:15-19,21-28,29-36,52-69,71-76
1a3u d1a3ua_ A:15-19,21-28,29-36,52-69,71-76
1a3v d1a3va_ A:15-19,21-28,29-36,52-69,71-76
1nuc d1nuca_ A:15-19,21-28,29-36,52-69,71-76
1snd d1sndb_ B:15-19,21-28,29-36,52-69,71-76
1rkn d1rkna_ A:12-18,21-27,32-36,61-70,71-77
1jok d1joka_ A:15-19,21-28,29-36,51-69,71-77
3. c.103.1 MTH938-like
MTH938-like core: 3 layers, b+a/b/a ; the central mixed sheet of 5 strands: order 21534; strand 2 is antiparallel to the rest
2cyj d2cyja1 A:2-8,9-14,15-19,93-105,109-116
1ihn d1ihna_ A:11-17,18-23,24-28,95-110,112-120
1ihn d1ihnb_ B:11-17,18-23,24-28,95-110,112-120
2fi9 d2fi9a1 A:18-22,25-29,30-34,102-117,119-126
4. d.93.1 SH2 domain
SH2-like 3 layers: a/b/a; antiparallel beta-sheet of 5 strands is flaked by two helices
1tce d1tcea_ A:27-34,40-48,49-57,72-84,86-90
5. d.153.2 Archaeal IMP cyclohydrolase PurO has a putative active site in the same topological location as the Ntn hydrolase but lacks the N-terminal nucleophile !
Ntn hydrolase-like 4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
2ntl d2ntlb1 B:29-36,37-44,58-66,162-173,181-191
2ntl d2ntlc1 C:29-36,37-44,58-66,162-173,181-191
2ntl d2ntld1 D:29-36,37-44,58-66,162-173,181-191
2ntl d2ntla1 A:29-36,37-44,58-66,162-173,181-191
2ntm d2ntma1 A:29-36,37-44,58-66,162-173,181-191
2ntm d2ntmc1 C:29-36,37-44,58-66,162-173,181-191
2ntk d2ntka1 A:29-36,37-44,58-66,162-173,181-191
2ntk d2ntkb1 B:29-36,37-44,58-66,162-173,181-191
2ntk d2ntkd1 D:29-36,37-44,58-66,162-173,181-191
2ntk d2ntkc1 C:29-36,37-44,58-66,162-173,181-191
2ntm d2ntmd1 D:29-36,37-44,58-66,162-173,181-191
1kuu d1kuua_ A:29-36,37-44,58-66,162-173,181-191
2ntm d2ntmb1 B:29-36,37-44,58-66,162-173,181-191
6. d.136.1 Phospholipase D/nuclease
Phospholipase D/nuclease beta-alpha-beta-alpha-beta-alpha-beta(4)-alpha; mixed sheet: order 1765234
2o8r d2o8rb3 B:439-446,454-462,473-480,481-497,626-631
2o8r d2o8ra3 A:439-446,454-462,473-480,481-497,626-631
1v0t d1v0ta1 A:172-177,179-185,202-209,208-230,471-480
1v0y d1v0ya1 A:172-177,179-185,202-209,208-230,470-480
1xdo d1xdoa3 A:436-446,447-458,469-476,477-494,623-628
1v0s d1v0sa1 A:172-177,179-185,200-209,208-230,471-480
1v0u d1v0ua1 A:172-177,179-185,202-209,210-233,471-480
1v0r d1v0ra1 A:172-177,179-185,202-209,210-233,471-480
1v0v d1v0va1 A:172-177,179-185,202-209,210-233,470-480
1xdo d1xdob3 B:436-446,447-458,469-476,477-494,621-628
1v0w d1v0wa1 A:172-177,179-185,200-209,210-233,471-480
1f0i d1f0ia1 A:172-177,179-185,200-209,210-233,470-480
1xdp d1xdpa3 A:437-446,447-458,469-476,477-494,620-628
1xdp d1xdpb3 B:437-446,447-458,469-476,477-494,620-628
7. g.44.1 RING/U-box
RING/U-box dimetal(zinc)-bound alpha+beta motif; structurally diverse
1v87 d1v87a_ A:16-20,55-60,61-66,66-77,82-87
8. d.75.1 tRNA-intron endonuclease N-terminal domain-like
MutS N-terminal domain-like beta(2)-alpha-beta(2)-alpha-beta(2); 2 layers, alpha/beta
1a79 d1a79a2 A:9-16,17-22,41-46,46-57,99-106
1a79 d1a79c2 C:9-16,17-22,41-46,46-57,99-106
1r0v d1r0va3 A:148-155,156-161,177-182,182-193,231-237
1r0v d1r0vb3 B:148-155,156-161,177-182,182-193,231-237
1r0v d1r0vc3 C:148-155,156-161,177-182,182-193,231-237
1r0v d1r0vd3 D:148-155,156-161,177-182,182-193,231-237
1r11 d1r11a4 A:148-155,156-161,177-182,182-193,231-237
1rlv d1rlvb4 B:148-155,156-161,177-182,182-193,231-237
1rlv d1rlva4 A:148-155,156-161,177-182,182-193,231-237
1r11 d1r11b4 B:148-155,156-161,177-182,182-193,231-237
2gjw d2gjwc4 C:150-157,158-163,179-184,184-195,233-239
2gjw d2gjwb4 B:150-157,158-163,179-184,184-195,233-239
1a79 d1a79b2 B:9-16,17-22,41-46,46-57,101-106
1a79 d1a79d2 D:9-16,17-22,41-46,46-57,101-106
2gjw d2gjwd4 D:154-158,159-164,180-185,185-196,234-240
2gjw d2gjwa4 A:154-158,159-164,180-185,185-196,234-240
9. b.40.4 Nucleic acid-binding proteins
OB-fold barrel, closed or partly opened n=5, S=10 or S=8; greek-key
1bvs d1bvsa3 A:8-14,15-21,23-28,31-38,44-54
1bvs d1bvsg3 G:8-14,15-21,23-28,31-38,44-54
1bvs d1bvse3 E:8-14,15-21,23-28,31-38,44-54
1bvs d1bvsc3 C:8-14,15-21,23-28,31-38,44-54
10. d.261.1 Hypothetical protein PH1602
Hypothetical protein PH1602 complex alpha+beta fold; contains a region of similarity to the ferredoxin-like fold
1uc2 d1uc2a_ A:5-9,11-16,24-30,31-42,71-75
1uc2 d1uc2b_ B:5-9,11-16,24-30,31-42,71-75
11. d.18.1 ssDNA-binding transcriptional regulator domain
ssDNA-binding transcriptional regulator domain helix-swapped dimer of beta(4)-alpha motifs
2it9 d2it9d1 D:8-14,21-27,28-34,34-56,83-92
2nvn d2nvna1 A:10-17,23-29,30-36,36-58,85-94
2it9 d2it9c1 C:8-14,21-27,28-34,34-59,83-95
2it9 d2it9b1 B:8-14,21-27,28-34,34-59,83-95
2it9 d2it9a1 A:8-15,21-27,28-34,34-60,83-97
12. b.30.5 Galactose mutarotase-like probable carbohydrate-binding domain in enzymes acting on sugars !
Supersandwich sandwich; 18 strands in 2 sheets
1n7r d1n7ra3 A:729-735,740-747,791-800,802-814,823-831
1n7n d1n7na3 A:729-735,740-747,791-800,802-814,823-831
1n7q d1n7qa3 A:730-735,740-747,791-800,802-814,823-831
1ojo d1ojoa3 A:730-735,740-747,791-800,802-814,823-831
1n7p d1n7pa3 A:730-735,740-747,791-800,802-814,823-831
1c82 d1c82a3 A:730-735,740-747,791-800,802-814,823-831
2brw d2brwb3 B:729-735,740-747,790-800,802-814,823-831
1f9g d1f9ga3 A:730-735,740-747,791-800,802-814,823-831
1ojn d1ojna3 A:730-735,740-747,791-800,802-814,823-831
1n7o d1n7oa3 A:730-735,740-747,791-800,802-814,823-831
2brp d2brpa3 A:730-735,740-747,791-800,802-814,823-831
1w3y d1w3ya3 A:730-735,740-747,791-800,802-814,823-831
2brw d2brwa3 A:729-735,740-747,790-800,802-814,823-831
1egu d1egua3 A:730-735,740-747,791-800,802-814,823-831
2brv d2brvx3 X:730-735,741-747,790-800,802-814,823-831
1loh d1loha3 A:730-735,740-747,791-800,802-814,823-831
1lxk d1lxka3 A:730-735,740-747,791-800,802-814,823-831
1ojp d1ojpa3 A:730-735,740-747,790-800,802-814,823-831
1ojm d1ojma3 A:730-735,740-747,790-800,802-814,823-831
1f1s d1f1sa4 A:827-832,838-844,889-898,900-911,921-929
13. e.13.1 DNA primase core
DNA primase core 2 domains: (1) alpha+beta; (2) toprim alpha/beta
1eqn d1eqnb_ B:157-163,201-211,213-222,266-277,280-285
1nui d1nuia1 A:95-102,103-114,116-126,158-170,174-179
1nui d1nuib1 B:95-102,103-114,116-126,158-170,174-179
1q57 d1q57f2 F:95-102,103-114,116-126,158-170,174-179
1q57 d1q57b2 B:95-102,103-114,116-126,158-170,174-179
1q57 d1q57g2 G:95-102,103-114,116-126,158-170,174-179
1q57 d1q57c2 C:95-102,103-114,116-126,158-170,174-179
1q57 d1q57e2 E:95-102,103-114,116-126,158-170,174-179
1q57 d1q57d2 D:95-102,103-114,116-126,158-170,174-179
14. b.59.1 XRCC4, N-terminal domain an HTH motif connects strands 4 and 5 !
XRCC4, N-terminal domain barrel, closed; n=7, S=10; order: 1234765; strands 1 and 5 are parallel to each other
1fu1 d1fu1a1 A:17-25,31-39,40-48,62-76,92-102
1fu1 d1fu1b1 B:417-425,431-439,440-448,462-476,492-502
1ik9 d1ik9b1 B:17-25,31-39,40-48,62-76,92-102
15. d.283.1 Putative modulator of DNA gyrase, PmbA/TldD
Putative modulator of DNA gyrase, PmbA/TldD consists of two different alpha+beta domains; d1: [duplication of alpha-beta(3)-alpha motif; 2 layers: a/b; antiparallel beta-sheet, order: 321456; strands 1, 2, 4 and 5 are twice longer than other secondary structures]; d2 [ complex fold; contains beta-barrel (n=5, S=10)]
1vpb d1vpba_ A:146-166,168-189,191-203,210-227,357-367
List of motif hits that are not present in SCOP but are found in PDB for pattern ID: 437 (enumeration index: query278) of S5
3erq A:15-19,21-28,29-36,52-69,71-76
3p1y D:148-155,156-161,188-192,192-203,241-247
3p1y C:148-155,156-161,188-192,192-203,241-247
3p1y A:148-155,156-161,188-192,192-203,241-247
3p1y B:148-155,156-161,188-192,192-203,241-247
2qdb A:15-19,21-28,29-36,54-69,71-76
2eyj A:15-19,21-28,29-36,52-69,71-76
3lx0 A:15-19,21-28,29-36,52-69,71-76
3c1f A:15-19,21-28,29-36,54-69,71-76
3nxw A:15-19,21-28,29-36,54-69,71-76
2f0l A:15-19,21-28,29-36,54-69,71-76
3mvv A:15-19,21-28,29-36,52-69,71-76
2au3 A:142-147,185-194,196-205,250-261,264-269
3dmu A:15-19,21-28,29-36,54-69,71-76
2eyo A:15-19,21-28,29-36,54-69,71-76
3sr2 A:17-25,31-39,40-48,62-76,93-101
3sr2 F:17-25,30-39,40-49,62-76,93-102
3sr2 E:17-25,31-39,40-48,62-76,92-101
3sr2 B:17-25,30-39,40-49,62-76,93-101
2cv8 B:1-7,8-13,45-49,49-60,102-108
2cv8 A:1-7,8-13,45-49,49-60,102-108
2ey5 A:15-19,21-28,29-36,54-69,71-76
3pg6 D:612-621,630-645,651-667,667-684,699-704
3pg6 A:612-621,630-645,651-667,667-684,699-704
3pg6 B:612-621,630-645,651-667,667-684,699-704
3pg6 C:612-621,630-645,651-667,667-684,699-704
3sr1 A:15-19,21-28,29-36,52-70,71-76
3nhh A:15-19,21-28,29-36,54-69,71-76
2f0q A:15-19,21-28,29-36,54-69,71-76
3mxg H:8-15,17-24,25-31,32-46,47-53
3mxg E:8-15,17-24,25-31,32-46,47-53
3mxg J:8-15,17-24,25-31,32-46,47-53
3mxg D:8-15,18-24,25-31,32-46,47-53
3mxg I:8-15,17-24,25-31,32-46,47-53
3mxg G:8-15,17-24,25-31,32-46,47-53
3mxg C:8-15,18-24,25-31,32-46,47-53
3mxg A:8-15,17-24,25-31,32-46,47-53
3mxg F:8-15,17-24,25-31,32-46,47-53
3mxg B:8-15,17-24,25-31,32-46,47-53
2f0p A:15-19,21-28,29-36,54-69,71-76
3byt H:40-45,47-55,62-68,70-80,81-87
2pyk A:15-19,21-28,29-36,54-69,71-76
2f0t A:15-19,21-28,29-36,52-69,71-76
2pw5 A:15-19,21-28,29-36,54-69,71-76
2gm2 A:13-19,20-25,26-30,98-113,115-122
2rks A:15-19,21-28,29-36,52-69,71-76
2f0e A:15-19,21-28,29-36,52-69,71-76
2f0w A:15-19,21-28,29-36,54-69,71-76
2oxp A:15-19,21-28,29-36,54-69,71-76
2f0m A:15-19,21-28,29-36,52-69,71-76
3byy B:40-45,47-55,62-68,70-80,81-87
2f0g A:15-19,21-28,29-36,52-69,71-76
2ey1 A:15-19,21-28,29-36,54-69,71-76
3eji A:15-19,21-28,29-36,54-70,71-76
3ii6 B:17-25,30-39,40-49,62-76,92-102
3ii6 C:17-25,31-39,40-48,62-76,92-102
3ii6 D:17-25,30-38,42-49,62-76,92-102
3ii6 A:17-25,31-39,40-48,62-76,92-102
2eyh A:15-19,21-28,29-36,52-69,71-76
2exz A:15-19,21-28,29-36,54-69,71-76
3qon A:15-19,21-28,29-36,54-69,71-76
2f0h A:15-19,21-28,29-36,52-69,71-76
2ey6 A:15-19,21-28,29-36,54-69,71-76
3hsi A:141-146,147-152,172-177,177-194,386-397
2f0n A:15-19,21-28,29-36,52-69,71-76
2pzt A:15-19,21-28,29-36,54-69,71-76
2xsc A:9-16,18-25,26-32,33-47,49-54
2xsc D:9-16,18-25,26-32,33-47,49-54
2xsc E:9-16,18-25,26-32,33-47,49-54
2xsc C:9-16,18-25,26-32,33-47,49-54
2xsc B:9-16,18-25,26-32,33-47,49-54
2pzw A:15-19,21-28,29-36,54-69,71-76
3ite B:367-371,404-411,413-421,433-446,448-456
3e5s B:15-19,21-28,29-36,54-69,71-76
3e5s A:15-19,21-28,29-36,54-69,71-76
3t13 A:15-19,21-28,29-36,52-69,71-76
3t13 B:15-19,21-28,29-36,52-70,71-76
2khs A:15-19,21-28,29-36,54-70,71-76
2f0k A:15-19,21-28,29-36,54-69,71-76
3d6c A:15-19,21-28,29-36,54-69,71-76
3bvm A:41-45,47-55,62-68,70-80,81-87
2k2e A:14-19,20-25,26-30,122-137,139-147
2f0i A:15-19,21-28,29-36,54-69,71-76
2eym A:15-19,21-28,29-36,52-69,71-76
3k44 B:53-64,65-76,78-86,86-108,142-153
3k44 D:53-64,65-76,78-86,86-108,142-153
3k44 C:53-64,65-76,78-86,86-108,142-153
3k44 A:53-64,65-76,78-86,86-108,142-153
3cpk A:13-19,20-25,26-30,122-137,139-147
2zyz D:1-7,8-13,47-51,51-62,105-111
2zyz B:1-7,8-13,47-51,51-62,105-111
3d4d A:15-19,21-28,29-36,54-69,71-76
3d4d B:15-19,21-28,29-36,52-69,71-76
2f0d A:15-19,21-28,29-36,54-69,71-76
2ey2 A:15-19,21-28,29-36,52-69,71-76
2f0u A:15-19,21-28,29-36,52-69,71-76
3h6m A:15-19,21-28,29-36,54-69,71-76
3p75 A:15-19,21-28,29-36,52-69,71-76
2f0v A:15-19,21-28,29-36,54-69,71-76
2f0o A:15-19,21-28,29-36,52-69,71-76
3d4w A:15-19,21-28,29-36,54-69,71-76
3p1z L:9-16,17-22,53-57,57-68,110-116
3p1z B:9-16,17-22,53-57,57-68,110-116
3p1z J:9-16,17-22,53-57,57-68,110-116
3p1z D:9-16,17-22,53-57,57-68,110-116
3p1z H:9-16,17-22,53-57,57-68,110-116
3sk8 A:15-19,21-28,29-36,54-69,71-76
2f0s A:15-19,21-28,29-36,52-69,71-76
2of1 A:15-19,21-28,29-36,52-69,71-76
3mud B:17-25,31-39,40-48,62-76,92-102
3mud A:17-25,31-39,40-48,62-76,92-102
2f0j A:15-19,21-28,29-36,52-69,71-76
3q4f C:17-25,31-39,40-48,62-76,92-102
3q4f H:17-25,31-39,40-48,62-76,92-102
3q4f D:17-25,31-39,40-48,62-76,92-102
3q4f G:17-25,31-39,40-48,62-76,92-102
2eyl A:15-19,21-28,29-36,52-69,71-76
2eyf A:15-19,21-28,29-36,54-69,71-76
2ze4 A:170-175,177-183,198-207,208-231,465-474
2ze9 A:170-175,177-183,200-207,206-228,464-474
3oso A:15-19,21-28,29-36,52-69,71-76
3pjp A:1275-1283,1288-1296,1300-1310,1330-1352,1404-1413
3pjp B:1275-1283,1288-1296,1300-1310,1330-1352,1404-1413
2f0f A:15-19,21-28,29-36,54-69,71-76
3evq A:15-19,21-28,29-36,52-69,71-76
2eyp A:15-19,21-28,29-36,52-69,71-76