1. c.23.16 Class I glutamine amidotransferase-like conserved positions of the oxyanion hole and catalytic nucleophile; different constituent families contain different additional structures !
Flavodoxin-like 3 layers, a/b/a; parallel beta-sheet of 5 strand, order 21345
1fye d1fyea_ A:1-7,121-128,186-191,194-200,202-207
1fy2 d1fy2a_ A:2-7,121-128,186-191,194-200,201-207
1fye d1fyea_ A:1-7,121-128,152-157,194-200,202-207
1fy2 d1fy2a_ A:2-7,121-128,152-157,194-200,201-207
2. f.4.3 Porins
Transmembrane beta-barrels not a true fold, gathers together transmembrane barrels of different (n,S)
1kmp d1kmpa_ A:101-109,119-128,129-133,188-197,209-217
1po3 d1po3a_ A:101-109,119-128,129-133,188-197,209-217
1po3 d1po3b_ B:101-109,119-128,129-133,188-197,209-217
2guf d2gufa1 A:25-30,41-49,51-56,105-114,122-131
1nqf d1nqfa_ A:25-30,41-50,51-58,105-114,123-131
3. c.47.1 Thioredoxin-like
Thioredoxin fold core: 3 layers, a/b/a; mixed beta-sheet of 4 strands, order 4312; strand 3 is antiparallel to the rest
1qxh d1qxhb_ B:46-54,111-119,119-123,132-140,142-150
1xvw d1xvwb1 B:30-38,98-105,105-110,115-123,125-133
1zye d1zyel1 L:32-40,105-112,113-117,122-130,132-141
1zye d1zyek1 K:32-40,105-112,113-117,122-130,132-141
1zye d1zyeb1 B:32-40,105-112,113-117,122-130,132-141
1zye d1zyea1 A:32-40,105-112,113-117,122-130,132-141
1zye d1zyed1 D:32-40,105-112,113-117,122-130,132-141
1zye d1zyef1 F:31-40,105-112,113-117,122-130,132-141
4. d.256.1 Ta1353-like
Ta1353-like core: beta-alpha-beta(2)-alpha-beta-alpha-beta; 3 layers: a/b/a; antiparallel beta-sheet of 5 strands; order: 51423;
1vgg d1vggb_ B:1-8,62-77,79-87,115-124,125-135
1vgg d1vggd_ D:1-8,62-77,79-87,115-124,125-135
1vgg d1vggf_ F:1-8,62-77,79-87,115-124,125-135
1vgg d1vgga_ A:1-8,62-77,79-87,115-124,125-135
1vgg d1vggc_ C:1-8,62-77,79-87,115-124,125-135
1vgg d1vgge_ E:1-8,62-77,79-87,115-124,125-135
5. e.52.1 NAD kinase/diacylglycerol kinase-like
NAD kinase/diacylglycerol kinase-like 2 domains: d1 [alpha/beta; related to the PFK N-terminal domain (scop_sf 53784)]; d2 [all-beta; atypical beta-sandwich made of 4 structural repeats of beta(3) unit]
2bon d2bona1 A:137-143,159-171,171-176,264-269,270-275
List of motif hits that are not present in SCOP but are found in PDB for pattern ID: 691 (enumeration index: query302) of S5
2jb7 A:6-13,67-82,85-93,119-127,131-140
2jb7 C:6-13,67-82,85-93,119-127,131-140
2jb7 B:6-13,67-82,85-93,119-127,131-140
2gl0 F:6-13,67-82,85-93,119-127,131-140
2gl0 A:6-13,67-82,85-93,119-127,131-140
2gl0 E:6-13,67-82,84-93,119-127,131-140
2gl0 D:6-13,67-82,85-93,119-127,131-140
2gl0 C:6-13,67-82,85-93,119-127,131-140
2gl0 B:6-13,67-82,85-93,119-127,131-140
2xpd F:45-54,111-119,119-123,132-140,142-150
2xpd B:45-54,111-119,119-123,132-140,142-150
2xpd D:46-54,111-119,119-123,132-140,142-150
2xpd C:46-54,111-119,119-123,132-140,142-150
2xpd E:45-54,111-119,118-123,132-140,142-150
2au3 A:142-147,148-160,170-174,185-194,196-205
2au3 A:142-147,148-160,178-182,185-194,196-205
3hvv A:46-54,111-119,119-123,132-140,142-150
3hvx A:46-54,111-119,119-123,132-140,142-150
3hvx B:46-54,111-119,119-123,132-140,142-150
3hvx C:46-54,111-119,119-124,132-140,142-150
3hvx D:46-54,111-119,119-123,132-140,142-150
3hvs A:46-54,111-119,119-123,132-140,142-150
3hvs B:45-54,111-119,119-123,132-140,142-150
1wvq A:6-13,67-82,85-93,119-127,131-140
1wvq C:6-13,67-82,85-93,119-127,131-140
1wvq B:6-13,67-82,85-93,119-127,131-140
2d16 C:1-9,63-78,81-89,115-124,125-135
2d16 A:1-9,63-78,81-89,115-124,125-135
2d16 B:2-9,63-78,81-89,115-124,125-135
2d16 D:2-9,63-78,80-89,115-124,125-135
3keb C:47-55,115-122,122-127,135-143,145-153
3keb B:47-55,115-122,122-127,135-143,145-153
2ovi A:39-44,43-58,94-100,105-115,116-127
2ovi D:39-44,46-58,94-100,105-115,116-127
2ovi B:38-44,43-58,94-100,105-115,116-127
2ovi C:38-44,43-58,94-100,105-115,116-127
2ekm A:3-10,64-79,81-90,116-125,126-136
2ekm C:3-10,64-79,82-90,116-125,126-136
2ekm B:3-10,64-79,81-90,116-125,126-136
3ddr B:122-127,138-146,148-152,202-212,222-231
3ddr A:122-127,138-146,148-152,202-212,222-231
2ph0 B:39-45,47-59,95-102,106-116,117-128
2ph0 A:39-45,44-59,95-101,105-116,117-128
3lbb B:23-31,43-63,63-69,83-95,97-108
3i43 A:46-54,111-119,119-123,132-140,142-150
3i43 B:45-54,111-119,119-123,132-140,142-150
3l4e A:2-8,120-127,155-160,189-196,197-204