1. d.89.1 Origin of replication-binding domain, RBD-like Origin of replication-binding domain, RBD-like alpha-beta-alpha-beta(2)-alpha-beta-alpha-beta; 3 layers: a/b/a; antiparallel sheet 41325 1tbd d1tbda_ A:36-52,52-62,63-72,100-111,113-120 2ntc d2ntcb1 B:164-180,181-190,191-199,228-239,241-247 2itl d2itlb1 B:164-180,181-190,191-199,228-239,241-247 2itl d2itla1 A:164-180,181-190,191-199,228-239,241-247 2ntc d2ntca1 A:164-180,181-190,191-199,228-239,241-247 2ipr d2iprb1 B:164-180,181-190,191-199,228-239,241-247 2itj d2itja1 A:164-180,180-190,191-200,228-239,241-247 2ipr d2ipra1 A:164-180,181-190,191-199,228-239,241-247 2if9 d2if9a1 A:164-180,181-190,191-199,228-239,241-247 2fuf d2fufa1 A:164-180,181-190,191-199,228-239,241-247 2if9 d2if9b1 B:164-180,181-190,191-199,228-239,241-247 2tbd d2tbda_ A:36-52,53-62,63-71,100-111,113-119 2itj d2itjb1 B:171-180,181-190,191-199,228-239,241-247 1m55 d1m55a_ A:49-72,76-85,86-96,146-157,161-168 1m55 d1m55b_ B:49-72,76-85,86-96,146-157,161-168 1uut d1uuta_ A:49-72,76-85,86-96,146-157,161-168 1z1d d1z1db1 B:36-52,53-62,63-71,100-110,113-120 2tbd d2tbda_ A:11-18,29-36,63-71,76-92,93-99 1rz9 d1rz9e_ E:49-72,76-85,86-96,146-158,161-168 1rz9 d1rz9d_ D:49-72,76-85,86-96,146-158,161-168 1z1d d1z1db1 B:11-18,29-36,63-71,76-92,93-99 1uut d1uutb_ B:49-72,76-85,86-96,146-157,161-168 1rz9 d1rz9c_ C:49-72,76-85,86-96,146-158,161-168 1rz9 d1rz9a_ A:49-72,76-85,86-96,146-158,161-168 1rz9 d1rz9b_ B:49-72,76-85,86-96,146-158,161-168 2itl d2itlb1 B:139-146,157-164,191-199,204-217,221-227 2ntc d2ntcb1 B:139-146,157-164,191-199,204-216,221-227 2ntc d2ntca1 A:139-146,157-164,191-199,204-217,221-227 2ipr d2iprb1 B:139-146,157-164,191-199,204-216,221-227 2itl d2itla1 A:139-146,157-164,191-199,204-217,221-227 1tbd d1tbda_ A:11-18,29-36,63-72,76-92,93-99 2ipr d2ipra1 A:139-146,157-164,191-199,204-216,221-227 2if9 d2if9b1 B:139-146,157-164,191-199,204-216,221-227 2fuf d2fufa1 A:139-146,157-164,191-199,204-216,221-227 1l5i d1l5ia_ A:24-36,39-52,54-66,96-107,110-115 2if9 d2if9a1 A:139-146,157-164,191-199,204-216,221-227 2itj d2itjb1 B:139-146,157-164,191-199,204-214,221-227 2itj d2itja1 A:139-146,157-164,191-200,204-217,221-227 1l2m d1l2ma_ A:24-36,39-52,54-66,97-107,110-115 1ksy d1ksya_ A:160-172,190-198,227-238,242-255,260-267 1f08 d1f08a_ A:160-172,190-198,227-238,242-255,260-265 1r9w d1r9wa_ A:257-266,265-276,279-289,321-335,337-341 1ksx d1ksxf_ F:159-172,190-198,227-238,242-255,260-265 1ksx d1ksxn_ N:159-172,190-198,227-238,242-255,260-265 1ksx d1ksxb_ B:159-172,190-198,227-238,242-255,260-265 1ksx d1ksxj_ J:159-172,190-198,227-238,242-255,260-265 1ksy d1ksyc_ C:159-172,190-198,227-238,242-255,260-267 1ksx d1ksxi_ I:200-215,214-226,227-238,270-284,286-290 1ksx d1ksxe_ E:200-215,214-226,227-238,270-284,286-290 1ksx d1ksxa_ A:200-215,214-226,227-238,270-284,286-290 1ksx d1ksxm_ M:200-215,214-226,227-238,270-284,286-290 1f08 d1f08b_ B:159-172,190-198,227-238,242-255,260-265 1ksy d1ksyc_ C:200-215,214-226,227-238,270-284,286-290 1ksy d1ksyb_ B:200-215,214-226,227-238,270-284,286-290 1ksy d1ksya_ A:200-215,214-226,227-238,270-284,286-290 1ksx d1ksxj_ J:200-215,214-226,227-238,270-284,286-290 1ksx d1ksxf_ F:200-215,214-226,227-238,270-284,286-290 1ksx d1ksxb_ B:200-215,214-226,227-238,270-284,286-290 1ksx d1ksxn_ N:200-215,214-226,227-238,270-284,286-290 1f08 d1f08a_ A:200-215,214-226,227-238,270-284,286-290 1f08 d1f08b_ B:200-215,214-226,227-238,270-284,286-290 1ksy d1ksyb_ B:156-172,190-198,227-238,242-255,260-267 3. c.97.1 Cytidine deaminase-like contains extra C-terminal strand 5, order 21345 ! Cytidine deaminase-like core: alpha-beta(2)-(alpha-beta)2; 3 layers (a/b/a); mixed beta-sheet of 4 strands, order 2134; strand 1 is antiparallel to the rest 1vk9 d1vk9a_ A:2-17,19-24,26-32,34-47,49-58 1mq0 d1mq0a_ A:14-29,37-45,47-53,65-78,81-90 2fr6 d2fr6a1 A:12-29,38-45,47-53,65-78,81-89 2fr5 d2fr5d1 D:12-29,38-45,47-53,65-78,81-89 2fr6 d2fr6d1 D:12-29,38-45,47-53,65-78,81-89 1zab d1zabd1 D:12-29,38-45,47-53,65-78,81-89 1ctu d1ctua1 A:48-64,74-80,82-88,102-115,118-125 2fr6 d2fr6b1 B:11-29,38-45,47-53,65-78,81-89 1zab d1zabb1 B:11-29,38-45,47-53,65-78,81-89 1aln d1alna1 A:48-64,74-80,82-88,102-115,118-125 1zab d1zaba1 A:12-29,38-45,47-53,65-78,81-89 1ctu d1ctua2 A:189-202,211-218,220-226,238-251,256-265 1zcz d1zczb2 B:197-214,217-224,225-233,235-248,253-259 1ctt d1ctta2 A:189-202,211-218,220-226,238-251,256-265 1af2 d1af2a1 A:48-64,74-80,82-88,102-115,118-125 1ctt d1ctta1 A:48-64,74-80,82-88,102-115,118-125 1aln d1alna2 A:189-202,211-218,220-226,238-251,256-265 1r5t d1r5td_ D:7-25,33-41,43-49,61-74,78-87 1r5t d1r5tb_ B:7-25,33-41,43-49,61-74,78-87 1r5t d1r5ta_ A:7-25,33-41,43-49,61-74,78-87 1zcz d1zcza2 A:197-214,217-224,225-233,235-248,254-259 2fr5 d2fr5a1 A:12-29,37-45,47-53,65-78,81-90 1af2 d1af2a2 A:189-202,211-218,220-226,238-251,256-265 2pw9 d2pw9d1 D:129-145,153-161,162-171,172-187,193-198 2z3h d2z3hd1 D:4-22,28-36,38-45,54-67,70-79 1zab d1zabc1 C:11-29,38-45,47-53,65-78,81-89 2pw9 d2pw9c1 C:129-145,153-161,162-171,172-187,193-198 1wn5 d1wn5d1 D:4-22,28-36,38-45,54-67,70-79 2pw9 d2pw9a1 A:129-145,153-161,162-171,172-187,193-198 1r5t d1r5tc_ C:7-25,33-41,43-49,61-74,78-87 2hxv d2hxva2 A:-3-17,26-33,34-42,49-62,68-74 2z3g d2z3ga1 A:4-22,28-36,38-45,54-67,70-79 1wn5 d1wn5b1 B:4-22,28-36,38-45,54-67,70-79 2z3g d2z3gd1 D:4-22,28-36,38-45,54-67,70-79 1mq0 d1mq0b_ B:13-29,37-45,47-53,65-78,81-90 2pw9 d2pw9b1 B:129-145,153-161,162-171,172-187,193-198 2z3h d2z3ha1 A:4-22,28-36,38-45,54-67,70-79 2z3g d2z3gc1 C:4-22,28-36,38-45,54-67,70-79 2z3h d2z3hc1 C:4-22,28-36,38-45,54-67,70-79 1wn5 d1wn5c1 C:4-22,28-36,38-45,54-67,70-79 2z3h d2z3hb1 B:4-22,28-36,38-45,54-67,70-79 1wn6 d1wn6a1 A:4-22,28-36,38-45,54-67,70-79 1wn5 d1wn5a1 A:4-22,28-36,38-45,54-67,70-79 2fr5 d2fr5b1 B:11-29,37-45,47-53,65-78,81-90 2fr5 d2fr5c1 C:11-29,37-45,47-53,65-78,81-90 2z3g d2z3gb1 B:4-22,28-36,38-45,54-67,70-79 1pl0 d1pl0b2 B:236-258,260-267,268-276,297-311,316-323 1wn6 d1wn6b1 B:4-22,28-36,38-45,54-67,70-79 1pl0 d1pl0d2 D:236-258,260-267,268-276,297-311,316-323 2fr6 d2fr6c1 C:11-29,37-45,47-53,65-78,81-90 1thz d1thzb2 B:237-259,261-268,269-277,298-312,317-324 1vq2 d1vq2a_ A:2-17,24-31,32-40,104-117,123-129 1g8m d1g8mb2 B:237-259,261-268,269-277,298-312,317-324 1g8m d1g8ma2 A:237-259,261-268,269-277,298-312,317-324 1pkx d1pkxb2 B:236-258,260-267,268-276,297-311,316-323 1thz d1thza2 A:237-259,261-268,269-277,298-312,317-324 1m9n d1m9nb2 B:237-259,261-268,269-277,298-312,317-324 1pkx d1pkxd2 D:236-258,260-267,268-276,297-311,316-323 1pkx d1pkxa2 A:236-258,260-267,268-276,297-311,316-323 1m9n d1m9na2 A:237-259,261-268,269-277,298-312,317-324 1zcz d1zcza2 A:336-353,356-363,364-372,375-388,394-399 1pkx d1pkxc2 C:236-258,260-267,268-276,297-311,316-323 2d5n d2d5nc2 C:1-17,26-33,34-42,49-59,63-71 1oz0 d1oz0a2 A:237-259,261-268,269-277,298-312,317-324 1p4r d1p4ra2 A:236-258,260-267,268-276,297-311,316-323 1zcz d1zczb2 B:336-353,356-363,364-372,375-388,394-399 1pl0 d1pl0a2 A:236-258,260-267,268-276,297-311,317-323 1p4r d1p4rb2 B:236-258,260-267,268-276,297-311,317-323 2d5n d2d5nd2 D:0-17,26-33,34-42,49-59,65-71 2g84 d2g84a1 A:25-44,48-56,57-66,77-91,102-109 1pl0 d1pl0c2 C:236-258,260-267,268-276,297-311,317-322 1g8m d1g8ma2 A:412-429,432-439,440-448,451-471,535-540 2d30 d2d30a1 A:2-17,26-33,35-41,53-66,69-78 1uwz d1uwzb_ B:2-17,26-33,35-41,53-66,69-78 1pkx d1pkxc2 C:411-428,431-438,439-447,450-470,534-539 1ux1 d1ux1a_ A:2-17,26-33,35-41,53-66,69-78 1pl0 d1pl0c2 C:411-428,431-438,439-447,450-470,534-539 1pl0 d1pl0a2 A:411-428,431-438,439-447,450-470,534-539 1pkx d1pkxa2 A:411-428,431-438,439-447,450-470,534-539 2b3j d2b3ja1 A:1-22,26-33,34-42,53-67,74-80 2b3j d2b3jb1 B:2-22,26-33,34-42,53-67,74-80 2b3z d2b3zc2 C:1-17,26-33,34-42,49-59,63-71 1ux0 d1ux0a_ A:2-17,26-33,35-41,53-66,69-78 1uwz d1uwza_ A:2-17,26-33,35-41,53-66,69-78 1pkx d1pkxd2 D:411-428,431-438,439-447,450-470,534-539 1g8m d1g8mb2 B:412-429,432-439,440-448,451-471,535-540 1ux1 d1ux1c_ C:2-17,26-33,35-41,53-66,69-78 1ux0 d1ux0b_ B:2-17,26-33,35-41,53-66,69-78 1pkx d1pkxb2 B:411-428,431-438,439-447,450-470,534-539 1thz d1thzb2 B:412-429,432-439,440-448,451-471,535-540 1m9n d1m9na2 A:412-429,432-439,440-448,451-471,535-540 1m9n d1m9nb2 B:412-429,432-439,440-448,451-471,535-540 1ux1 d1ux1b_ B:2-17,26-33,35-41,53-66,69-78 2b3j d2b3jc1 C:1-22,26-33,34-42,53-67,74-80 1thz d1thza2 A:412-429,432-439,440-448,451-471,535-540 1wwr d1wwrb1 B:2-21,25-32,33-41,52-66,72-79 2d30 d2d30b1 B:2-17,26-33,35-41,53-66,69-78 1ux1 d1ux1d_ D:2-17,26-33,35-41,53-66,69-78 2d5n d2d5na2 A:1-17,26-33,34-42,49-59,65-71 1oz0 d1oz0b2 B:237-259,261-268,269-277,298-312,318-323 1jtk d1jtkb_ B:2-17,26-33,35-41,53-66,69-78 1jtk d1jtka_ A:2-17,26-33,35-41,53-66,69-78 1pl0 d1pl0d2 D:411-428,431-438,439-447,450-470,534-539 1pl0 d1pl0b2 B:411-428,431-438,439-447,450-470,534-539 1p4r d1p4rb2 B:411-428,431-438,439-447,450-470,534-539 1oz0 d1oz0b2 B:412-429,432-439,440-448,451-471,535-540 2b3z d2b3za2 A:1-17,26-33,34-42,49-59,65-71 1wwr d1wwrd1 D:2-21,25-32,33-41,52-66,73-79 1wwr d1wwra1 A:2-21,25-32,33-41,52-66,73-79 1oz0 d1oz0a2 A:412-429,432-439,440-448,451-471,535-540 1af2 d1af2a1 A:34-46,74-80,82-88,102-115,118-125 1aln d1alna1 A:34-46,74-80,82-88,102-115,118-125 1wwr d1wwrc1 C:2-21,25-32,33-41,52-66,73-79 1p4r d1p4ra2 A:411-428,431-438,439-447,450-470,534-539 2b3j d2b3jd1 D:3-22,26-33,34-42,53-67,74-80 1ctu d1ctua1 A:34-46,74-80,82-88,102-115,118-125 2b3z d2b3zd2 D:0-20,26-33,34-42,49-59,65-71 2d5n d2d5nb2 B:1-17,26-33,34-42,49-59,65-71 1ctt d1ctta1 A:34-46,74-80,82-88,102-115,118-125 2b3z d2b3zb2 B:1-17,26-33,34-42,49-59,65-71 1z3a d1z3ab1 B:18-37,41-48,49-57,68-82,89-95 1z3a d1z3aa1 A:18-37,41-48,49-57,68-82,89-95 1tiy d1tiya_ A:2-21,26-33,34-42,53-67,74-80 1wkq d1wkqa_ A:2-21,26-33,34-42,53-67,74-80 1wkq d1wkqb_ B:2-21,26-33,34-42,53-67,74-80 2a8n d2a8na1 A:3-22,26-33,34-42,53-67,74-80 1tiy d1tiyb_ B:2-21,26-33,34-42,53-67,74-80 1p6o d1p6ob_ B:208-229,233-241,242-251,262-272,281-288 1rb7 d1rb7b_ B:7-29,33-41,42-51,62-72,81-88 1p6o d1p6oa_ A:8-29,33-41,42-51,62-72,81-88 1uaq d1uaqa_ A:8-29,33-41,42-51,62-72,81-88 1rb7 d1rb7a_ A:8-29,33-41,42-51,62-72,81-88 1ox7 d1ox7b_ B:208-229,233-241,242-251,262-272,281-288 1uaq d1uaqb_ B:8-29,33-41,42-51,62-72,81-88 1ox7 d1ox7a_ A:8-29,33-41,42-51,62-72,81-88 1ysd d1ysdb1 B:208-229,233-241,242-251,262-272,281-288 1ysb d1ysba1 A:8-29,33-41,42-51,62-72,81-88 1ysd d1ysda1 A:8-29,33-41,42-51,62-72,81-88 1ysb d1ysbb1 B:208-229,233-241,242-251,262-272,281-288 2a8n d2a8nb1 B:4-22,26-33,34-42,53-67,74-80 8. d.140.1 Ribosomal protein S8 Ribosomal protein S8 consists of 2 different alpha+beta subdomains arranged in a 4-layer structure: b/a/b/a 1vs5 d1vs5h1 H:29-43,99-106,107-111,111-119,120-129 2avy d2avyh1 H:29-43,99-106,107-111,111-119,120-129 1n34 d1n34h_ H:29-43,108-115,116-120,120-128,129-138 1xnr d1xnrh_ H:29-43,108-115,116-120,120-128,131-138 2vqf d2vqfh1 H:29-43,108-115,116-120,120-128,129-138 3d5c d3d5ch1 H:29-43,108-115,116-121,120-128,129-138 3d5a d3d5ah1 H:29-43,108-115,116-121,120-128,129-138 1s03 d1s03g_ G:29-43,99-106,107-111,111-119,120-129 1xnq d1xnqh_ H:29-43,108-115,116-120,120-128,129-138 2aw7 d2aw7h1 H:29-43,99-106,107-112,111-119,121-129 1n36 d1n36h_ H:29-43,108-115,116-120,120-128,129-138 1vs7 d1vs7h1 H:29-43,99-106,107-112,111-119,121-129 1s03 d1s03h_ H:29-43,99-106,107-111,111-119,120-129 2uxd d2uxdh1 H:29-43,108-115,116-120,120-128,131-138 2hhh d2hhhh1 H:29-43,108-115,116-120,120-128,129-138 2j00 d2j00h1 H:29-43,108-115,116-121,120-128,129-138 2j02 d2j02h1 H:29-43,108-115,116-121,120-128,129-138 2i2p d2i2ph1 H:29-43,99-106,107-112,111-119,122-129 2e5l d2e5lh1 H:29-43,108-115,116-120,120-128,131-138 1xmo d1xmoh_ H:29-43,108-115,116-120,120-128,129-138 2f4v d2f4vh1 H:29-43,108-115,116-120,120-128,129-138 2v46 d2v46h1 H:29-43,108-115,116-121,120-128,129-138 2v48 d2v48h1 H:29-43,108-115,116-121,120-128,129-138 2uu9 d2uu9h1 H:29-43,108-115,116-120,120-128,129-138 2uuc d2uuch1 H:29-43,108-115,116-120,120-128,129-138 1n33 d1n33h_ H:29-43,108-115,116-120,120-128,129-138 2uub d2uubh1 H:29-43,108-115,116-120,120-128,129-138 1i96 d1i96h_ H:29-43,108-114,117-121,120-128,129-138 1i95 d1i95h_ H:29-43,108-114,117-121,120-128,129-138 1i97 d1i97h_ H:29-43,109-114,117-121,120-128,131-138 2gyb d2gybh1 H:29-43,100-106,107-111,111-119,120-128 2hgp d2hgpk1 K:29-43,108-115,117-121,120-128,129-138 2b9m d2b9mh1 H:29-43,108-114,117-121,120-128,129-138 2b64 d2b64h1 H:29-43,108-114,117-121,120-128,129-138 2b9o d2b9oh1 H:29-43,108-114,117-121,120-128,129-138 1yl4 d1yl4k1 K:29-43,108-114,117-121,120-128,130-138 2i2u d2i2uh1 H:29-43,100-105,108-112,111-119,121-127 2hgi d2hgik1 K:29-43,108-114,117-121,120-128,129-138 2hgr d2hgrk1 K:29-43,108-114,117-121,120-128,129-138 2qnh d2qnhi1 I:29-43,108-115,117-121,120-128,129-138 2ow8 d2ow8i1 I:29-43,108-115,116-121,120-128,130-138 10. c.117.1 Amidase signature (AS) enzymes Amidase signature (AS) enzymes possible duplication: the topologies of N- and C-terminal halves are similar; 3 layers: a/b/a; single mixed beta-sheet of 10 strands, order 213549A867 (A=10); strands from 5 to 9 are antiparallel to the rest 1ock d1ocka_ A:154-164,165-170,188-195,196-209,370-381 1och d1ochb_ B:154-164,165-170,188-195,196-209,370-381 1o9q d1o9qb_ B:154-164,165-170,188-195,196-209,370-381 1obj d1objb_ B:154-164,165-170,188-195,196-209,370-381 1o9o d1o9ob_ B:154-164,165-170,188-195,196-209,370-381 1o9p d1o9pb_ B:154-164,165-170,188-195,196-209,370-381 1ocm d1ocmb_ B:154-164,165-170,188-195,196-209,370-381 1ocm d1ocma_ A:154-164,165-170,188-195,196-209,370-381 1ocl d1oclb_ B:154-164,165-170,188-195,196-209,370-381 1obk d1obkb_ B:154-164,165-170,188-195,196-209,370-381 1obl d1obla_ A:154-164,165-170,188-195,196-209,370-381 2g5h d2g5ha1 A:177-187,188-193,211-218,219-231,436-447 1obj d1obja_ A:154-164,165-170,188-195,196-209,370-381 1mt5 d1mt5e_ E:240-250,251-256,278-285,286-299,502-512 1ock d1ockb_ B:154-164,165-170,188-195,196-209,370-381 1obi d1obib_ B:154-164,165-171,188-195,196-209,369-381 1och d1ocha_ A:154-164,165-171,188-195,196-209,369-381 1ocl d1ocla_ A:154-164,165-171,188-195,196-209,369-381 1o9q d1o9qa_ A:154-164,165-171,188-195,196-209,369-381 1obl d1oblb_ B:154-164,165-171,188-195,196-209,369-381 2dqn d2dqna1 A:177-187,188-193,211-218,219-231,436-447 1o9o d1o9oa_ A:154-164,165-171,188-195,196-209,369-381 1obk d1obka_ A:154-164,165-171,188-195,196-209,369-381 1o9p d1o9pa_ A:154-164,165-171,188-195,196-209,369-381 1o9n d1o9nb_ B:155-164,165-170,188-195,196-209,370-381 1mt5 d1mt5m_ M:240-250,251-256,278-285,286-299,502-512 1mt5 d1mt5b_ B:240-250,251-256,278-285,286-299,502-512 1obi d1obia_ A:154-164,165-171,188-195,196-209,369-381 1o9n d1o9na_ A:155-164,165-170,188-195,196-209,370-381 1mt5 d1mt5n_ N:240-250,251-256,278-285,286-299,502-512 1mt5 d1mt5j_ J:240-250,251-256,278-285,286-299,502-512 2df4 d2df4a1 A:177-187,188-193,211-218,219-231,436-447 1mt5 d1mt5d_ D:240-250,251-256,278-285,286-299,502-513 1mt5 d1mt5o_ O:240-250,251-256,278-285,286-299,502-513 1mt5 d1mt5k_ K:240-250,251-256,278-285,286-299,502-513 1mt5 d1mt5f_ F:240-250,251-256,278-285,286-299,502-513 1mt5 d1mt5h_ H:240-250,251-256,278-285,286-299,502-513 1mt5 d1mt5p_ P:240-250,251-256,278-285,286-299,502-513 1m21 d1m21a_ A:225-235,236-241,259-266,267-279,481-492 1m21 d1m21b_ B:225-235,236-241,259-266,267-279,481-492 1mt5 d1mt5l_ L:240-250,251-256,278-285,286-299,502-513 1mt5 d1mt5a_ A:240-250,251-256,278-285,286-299,502-513 2f2a d2f2aa1 A:177-187,188-195,211-218,219-231,435-447 1mt5 d1mt5i_ I:240-250,251-256,278-285,286-299,502-513 1mt5 d1mt5g_ G:240-250,251-256,278-285,286-299,502-513 1mt5 d1mt5c_ C:240-250,251-256,278-285,286-299,502-513 1m22 d1m22a_ A:225-235,236-243,259-266,267-279,480-492 1m22 d1m22b_ B:225-235,236-243,259-266,267-279,480-492 2g5i d2g5ia1 A:177-187,188-195,211-218,219-231,435-447 2g5h d2g5ha1 A:155-165,188-193,211-218,219-231,436-447 2gi3 d2gi3a1 A:164-174,175-180,198-205,206-218,420-431 2df4 d2df4a1 A:155-165,188-193,211-218,219-231,436-447 2dqn d2dqna1 A:155-165,188-193,211-218,219-231,436-447 1ocl d1oclb_ B:132-142,165-170,188-195,196-209,370-381 1o9q d1o9qb_ B:132-142,165-170,188-195,196-209,370-381 1och d1ochb_ B:132-142,165-170,188-195,196-209,370-381 1obj d1objb_ B:132-142,165-170,188-195,196-209,370-381 1o9n d1o9nb_ B:132-142,165-170,188-195,196-209,370-381 1o9p d1o9pb_ B:132-142,165-170,188-195,196-209,370-381 1ocm d1ocmb_ B:132-142,165-170,188-195,196-209,370-381 1o9o d1o9ob_ B:132-142,165-170,188-195,196-209,370-381 1ock d1ockb_ B:132-142,165-170,188-195,196-209,370-381 1m21 d1m21a_ A:203-213,236-241,259-266,267-279,481-492 1m21 d1m21b_ B:203-213,236-241,259-266,267-279,481-492 1ock d1ocka_ A:132-142,165-170,188-195,196-209,370-381 2gi3 d2gi3a1 A:142-152,175-180,198-205,206-218,420-431 1obj d1obja_ A:132-142,165-170,188-195,196-209,370-381 1obl d1obla_ A:132-142,165-170,188-195,196-209,370-381 1obk d1obkb_ B:132-142,165-170,188-195,196-209,370-381 1ocm d1ocma_ A:132-142,165-170,188-195,196-209,370-381 1o9n d1o9na_ A:132-142,165-170,188-195,196-209,370-381 1obk d1obka_ A:132-142,165-171,188-195,196-209,369-381 1mt5 d1mt5n_ N:218-228,251-256,278-285,286-299,502-512 1obl d1oblb_ B:132-142,165-171,188-195,196-209,369-381 1ocl d1ocla_ A:132-142,165-171,188-195,196-209,369-381 2g5i d2g5ia1 A:155-165,188-195,211-218,219-231,435-447 1mt5 d1mt5j_ J:218-228,251-256,278-285,286-299,502-512 1obi d1obia_ A:132-142,165-171,188-195,196-209,369-381 1o9o d1o9oa_ A:132-142,165-171,188-195,196-209,369-381 1och d1ocha_ A:132-142,165-171,188-195,196-209,369-381 1o9q d1o9qa_ A:132-142,165-171,188-195,196-209,369-381 1m22 d1m22a_ A:203-213,236-243,259-266,267-279,480-492 1m22 d1m22b_ B:203-213,236-243,259-266,267-279,480-492 1obi d1obib_ B:132-142,165-171,188-195,196-209,369-381 1o9p d1o9pa_ A:132-142,165-171,188-195,196-209,369-381 2f2a d2f2aa1 A:155-165,188-195,211-218,219-231,435-447 1mt5 d1mt5m_ M:218-228,251-256,278-285,286-299,502-512 1mt5 d1mt5e_ E:218-228,251-256,278-285,286-299,502-512 1mt5 d1mt5b_ B:218-228,251-256,278-285,286-299,502-512 1mt5 d1mt5p_ P:218-228,251-256,278-285,286-299,502-513 1mt5 d1mt5f_ F:218-228,251-256,278-285,286-299,502-513 1mt5 d1mt5o_ O:218-228,251-256,278-285,286-299,502-513 1mt5 d1mt5d_ D:218-228,251-256,278-285,286-299,502-513 1mt5 d1mt5c_ C:218-228,251-256,278-285,286-299,502-513 1mt5 d1mt5i_ I:218-228,251-256,278-285,286-299,502-513 1mt5 d1mt5k_ K:218-228,251-256,278-285,286-299,502-513 1mt5 d1mt5h_ H:218-228,251-256,278-285,286-299,502-513 1mt5 d1mt5l_ L:218-228,251-256,278-285,286-299,502-513 1mt5 d1mt5g_ G:218-228,251-256,278-285,286-299,502-513 1mt5 d1mt5a_ A:218-228,251-256,278-285,286-299,502-513 20. e.73.1 CV3147-like CV3147-like 2 domains; d1: [alpha/beta; 3 layers, a/b/a, mixed beta-sheet of 8 strands, order 12543876, strands 1, 7 and 8 are antiparallel to the rest]; d2: [pseudo beta-barrel of 6 strands, meander] 2o3i d2o3ia1 A:80-98,154-161,163-173,182-198,202-212 2o3i d2o3ib1 B:80-98,154-161,163-173,182-198,203-212 25. b.43.2 FucI/AraA C-terminal domain-like Reductase/isomerase/elongation factor common domain barrel, closed; n=6, S=10; greek-key 2hxg d2hxgb1 B:308-323,389-400,401-413,434-446,449-456 2hxg d2hxgc1 C:308-323,388-400,401-413,434-446,449-456 2ajt d2ajtb1 B:308-323,389-400,401-413,434-446,449-456 2hxg d2hxga1 A:308-323,388-400,401-413,434-446,449-456 2ajt d2ajta1 A:308-323,389-400,401-413,434-446,449-456 2ajt d2ajtc1 C:308-323,389-400,401-413,434-446,449-456 1fui d1fuid1 D:339-354,454-466,470-482,516-524,527-534 1fui d1fuie1 E:339-354,454-467,469-481,516-524,527-534 1fui d1fuib1 B:339-354,455-467,469-481,516-524,527-534 1fui d1fuia1 A:339-354,454-467,469-482,516-524,527-534 1fui d1fuic1 C:339-354,454-467,469-482,516-524,527-534 1fui d1fuif1 F:339-354,454-467,469-482,516-524,527-534 26. d.58.62 Ribosomal protein L10-like consists of globular N-terminal domain, structurally similar to NDK, and the L7/L12-binding C-terminal alpha-helical tail Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1zax d1zaxa1 A:4-21,21-28,82-88,91-107,112-119 1zav d1zava1 A:3-21,21-28,82-88,91-107,112-119 1zaw d1zawa1 A:3-21,21-28,82-88,91-107,114-119 29. d.58.46 eEF1-gamma domain elaborated with additional structures ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1pbu d1pbua_ A:334-350,355-366,367-379,406-419,429-437 31. e.51.1 Urocanase Urocanase 3 domains; d1: alpha+beta [alpha(2)-beta(3); mixed sheet: 213]; d2: alpha/beta of the NAD(P)-binding Rossmann-fold superfamily (scop_sf 51735, most similar to scop_fa 51883 and scop_fa 51736); d3: alpha+beta of the glutamine synthetase/guanido kinase fold (scop_cf 55930); d1 and d3 form a single beta-sheet 1w1u d1w1ub_ B:24-39,357-367,407-414,414-432,436-443 1w1u d1w1ua_ A:24-39,357-367,407-414,414-432,436-443 1uwk d1uwkb_ B:24-39,357-367,407-414,414-432,436-443 1uwk d1uwka_ A:24-39,357-367,407-414,414-432,436-443 1uwl d1uwlb_ B:24-39,357-367,407-414,414-432,436-443 1uwl d1uwla_ A:24-39,357-367,407-414,414-432,436-443 1x87 d1x87b_ B:19-34,353-362,402-409,409-427,431-438 1x87 d1x87a_ A:19-34,354-362,402-408,409-427,431-439 1x87 d1x87b_ B:135-157,353-362,402-409,409-427,431-438 1uwk d1uwka_ A:140-162,357-367,407-414,414-432,436-443 1uwk d1uwkb_ B:140-162,357-367,407-414,414-432,436-443 1w1u d1w1ub_ B:140-162,357-367,407-414,414-432,436-443 1w1u d1w1ua_ A:140-162,357-367,407-414,414-432,436-443 1uwl d1uwlb_ B:140-162,357-367,407-414,414-432,436-443 1uwl d1uwla_ A:140-162,357-367,407-414,414-432,436-443 1x87 d1x87a_ A:135-157,354-362,402-408,409-427,431-439 32. d.357.1 NosL/MerB-like NosL/MerB-like unusual fold; comprises two structural repeats of beta(2)-alpha-beta motifs, forming separate beta-sheets; probable duplication 2hq3 d2hq3a1 A:51-63,97-104,114-118,119-130,131-137 2hpu d2hpua1 A:51-64,97-104,114-118,119-130,130-137