List of the counted superfamily hits for pattern ID: 1226 (enumeration index: query384.625.2070.2140.2634) of S5

List of the counted superfamily hits for pattern ID: 1226 (enumeration index: query384.625.2070.2140.2634) of S5

SCOP superfamily ID superfamiily description corresponding fold description
a.72.1Functional domain of the splicing factor Prp18 Functional domain of the splicing factor Prp18 core: 5 helices; bundle
a.211.1HD-domain/PDEase-like HD-domain/PDEase-like multihelical; consists of two different alpha-helical bundles
a.129.1GroEL equatorial domain-like duplication: two 4-helical subdomains are related by a pseudo dyad passing through the ATP-binding site ! GroEL equatorial domain-like multihelical; 8 helices arranged in 2 parallel layers
f.1.1Colicin Toxins' membrane translocation domains multi-helical domains of various folds which is thought to unfold in the membrane
a.174.1Double Clp-N motif duplication: contains two structural repeats of 4-helical motif ! Double Clp-N motif multihelical; array
f.51.1Rhomboid-like Rhomboid-like 6 transmembrane helices
a.128.1Terpenoid synthases duplication: two metal-binding sites are related by a pseudo dyad that also relates helices C-F to helices G-J ! Terpenoid synthases multihelical; core: 8 helices (C-J) are arranged in 2 parallel layers
a.168.1SopE-like GEF domain SopE-like GEF domain multihelical; consists of two all-alpha subdomains each containing a 3-helical bundle with right-handed twist
a.160.1PAP/OAS1 substrate-binding domain this domain follows the catalytic nucleotidyltransferase domain ! PAP/OAS1 substrate-binding domain core: 5-helical bundle; up-and-down; right-handed twist
f.24.1Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like 12 transmembrane helices in an approximate threefold rotational symmetric arrangement
a.224.1Glycolipid transfer protein, GLTP Glycolipid transfer protein, GLTP multihelical; 2 layers or orthogonally packed helices
f.35.1Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain 12 transmembrane helices; duplication: the N- and C-terminal halves of the whole proteins are structurally similar
f.44.1Ammonium transporter Ammonium transporter 11 transmembrane helices; duplication: consist of 2 structural repeats of five helices each plus extra C-terminal helix
f.33.1Calcium ATPase, transmembrane domain M Calcium ATPase, transmembrane domain M core: multihelical; consists of three transmembrane regions of 2, 2 and 6 helices, separated by cytoplasmic domains
a.289.1Sec63 N-terminal domain-like Sec63 N-terminal domain-like multihelical; consists of two helical subdomains
f.54.1SNF-like SNF-like 12 transmembrane helices; duplication: consists of two structurally similar halves
a.29.5alpha-ketoacid dehydrogenase kinase, N-terminal domain Bromodomain-like 4 helices; bundle; minor mirror variant of up-and-down topology
a.216.1I/LWEQ domain I/LWEQ domain 5 helices; bundle, closed, left-handed twist