1. a.80.1 post-AAA+ oligomerization domain-like associated with N-terminal domain from the AAA+ family of P-loop hydrolases ! post-AAA+ oligomerization domain-like core: 5 helices: bundle 3ctd d3ctda1 A:258-273,274-289,291-308,311-329,329-347 3ctd d3ctdb1 B:259-273,274-289,291-308,311-329,329-347 3bge d3bgeb1 B:252-268,269-284,286-303,306-324,324-342 1sxj d1sxje1 E:257-274,275-293,295-311,314-336,337-354 2r9g d2r9gc1 C:239-254,255-270,271-288,291-309,308-327 2r9g d2r9gb1 B:239-254,255-270,271-288,291-309,309-327 2r9g d2r9gd1 D:239-254,255-270,271-288,291-309,309-327 2r9g d2r9ge1 E:239-254,255-270,271-288,291-309,309-327 2r9g d2r9gp1 P:239-254,255-270,271-288,291-309,308-327 2r9g d2r9gg1 G:239-254,255-270,271-288,291-309,308-327 2r9g d2r9gk1 K:239-254,255-270,271-288,291-309,308-327 2r9g d2r9gm1 M:239-254,255-270,271-288,291-309,308-327 2r9g d2r9go1 O:239-254,255-270,271-288,291-309,308-327 2r9g d2r9gf1 F:239-254,255-270,271-288,291-309,308-327 2r9g d2r9gi1 I:239-254,255-270,271-288,291-309,308-327 2r9g d2r9gn1 N:239-254,255-270,271-288,291-309,309-327 2r9g d2r9gj1 J:239-254,255-270,271-288,291-309,308-327 2r9g d2r9gl1 L:239-254,255-270,271-288,291-309,308-327 2r9g d2r9gh1 H:239-254,255-270,271-288,291-309,308-327 2r9g d2r9ga1 A:239-254,255-270,271-288,291-309,309-327 3bge d3bgea1 A:251-268,269-284,286-303,306-324,324-342 1sxj d1sxjd1 D:264-278,279-293,297-311,315-336,338-353 2qw6 d2qw6c1 C:242-254,255-270,271-287,291-309,309-326 1xxh d1xxhf1 F:213-223,225-240,242-264,294-316,319-334 2qw6 d2qw6d1 D:242-254,255-270,271-287,291-309,308-327 2qw6 d2qw6b1 B:242-254,255-270,271-287,291-309,308-327 1a5t d1a5ta1 A:206-227,228-238,240-258,282-304,307-324 1jr3 d1jr3d1 D:213-223,225-240,242-264,294-316,319-333 1xxi d1xxia1 A:213-223,225-240,242-264,294-316,319-333 1xxi d1xxif1 F:213-223,225-240,242-264,294-316,319-333 2qw6 d2qw6a1 A:242-254,255-270,271-287,291-309,308-327 1xxh d1xxha1 A:213-223,225-240,242-264,294-316,319-333 1jqj d1jqjd1 D:213-223,225-240,242-268,294-316,322-333 1xxi d1xxij1 J:208-227,228-238,240-261,282-304,307-325 1jr3 d1jr3e1 E:208-227,228-238,240-261,282-304,307-325 1xxi d1xxie1 E:208-227,228-238,240-261,282-304,307-325 2gno d2gnoa1 A:209-227,228-244,244-264,267-283,289-306 1xxi d1xxid1 D:246-259,260-275,277-299,321-339,344-360 1jr3 d1jr3b1 B:246-259,260-275,277-299,321-339,344-360 1xxi d1xxii1 I:246-259,260-275,277-299,321-339,344-360 1a5t d1a5ta1 A:206-227,228-238,270-282,282-304,307-324 1xxh d1xxhd1 D:246-259,260-275,277-299,321-339,344-360 1xxh d1xxhi1 I:246-259,260-275,277-299,321-339,344-360 1xxh d1xxhj1 J:207-227,228-238,240-261,282-303,307-325 1xxh d1xxhb1 B:246-259,260-275,277-299,321-342,344-360 1jqj d1jqjc1 C:212-224,225-240,242-264,294-316,322-333 1xxh d1xxhg1 G:246-259,260-275,277-299,321-339,344-360 1xxh d1xxhj1 J:207-227,228-238,270-282,282-303,307-325 1xxh d1xxhh1 H:245-259,260-275,277-299,321-342,344-360 1xxi d1xxij1 J:208-227,228-238,270-282,282-304,307-325 1jr3 d1jr3e1 E:208-227,228-238,270-282,282-304,307-325 1xxi d1xxie1 E:208-227,228-238,270-282,282-304,307-325 1xxi d1xxib1 B:248-259,260-275,277-299,321-342,344-360 1jr3 d1jr3c1 C:248-259,260-275,277-299,321-342,344-360 1xxi d1xxig1 G:248-259,260-275,277-299,321-342,344-360 1jr3 d1jr3a1 A:245-259,260-275,277-299,321-339,344-360 1xxi d1xxic1 C:245-259,260-275,277-299,321-339,344-360 1xxi d1xxih1 H:245-259,260-275,277-299,321-339,344-360 1sxj d1sxjc1 C:240-254,255-271,273-288,292-313,315-333 1sxj d1sxjb1 B:232-242,244-260,262-277,281-302,305-322 1xxh d1xxhe1 E:207-227,228-238,240-261,282-304,307-325 1xxh d1xxhc1 C:245-259,260-275,277-299,321-343,344-360 1xxh d1xxhe1 E:207-227,228-238,270-282,282-304,307-325 1iqp d1iqpb1 B:235-249,250-266,268-283,286-307,309-327 1iqp d1iqpe1 E:235-249,250-266,268-283,286-307,309-327 1iqp d1iqpa1 A:235-249,250-266,268-283,286-307,309-327 1iqp d1iqpd1 D:235-249,250-266,268-283,286-307,309-327 1sxj d1sxja1 A:549-560,573-585,584-596,609-635,637-657 1jqj d1jqjd1 D:213-223,225-240,282-294,294-316,322-333 2. a.103.1 Citrate synthase Citrate synthase multihelical; consists of two all-alpha domains 1o7x d1o7xa_ A:34-42,166-183,265-279,282-304,311-324 1o7x d1o7xb_ B:34-42,166-183,265-279,282-304,311-324 1o7x d1o7xd_ D:34-42,166-183,265-279,282-304,311-324 1owc d1owcb_ B:1072-1081,1212-1229,1312-1330,1333-1349,1360-1373 1o7x d1o7xc_ C:34-42,166-181,265-279,282-304,311-324 1ixe d1ixea_ A:33-41,167-184,265-280,284-303,311-323 1a59 d1a59a_ A:35-43,169-186,276-294,295-314,318-331 1owc d1owca_ A:72-80,212-229,312-330,333-349,360-373 1owb d1owba_ A:72-80,212-229,312-330,333-349,360-373 1aj8 d1aj8a_ A:36-44,171-188,269-283,284-303,311-323 1aj8 d1aj8b_ B:36-44,171-188,269-283,284-303,311-323 4cts d4ctsa_ A:70-79,221-238,327-342,344-357,373-386 2csc d2csca_ A:70-79,221-238,327-342,344-365,373-386 1cts d1ctsa_ A:70-79,221-238,327-342,344-365,373-386 1csc d1csca_ A:70-78,221-238,327-342,344-365,373-386 5csc d5csca_ A:70-79,221-238,327-342,344-365,374-386 1csi d1csia_ A:70-78,221-238,327-342,344-365,373-386 3csc d3csca_ A:70-78,221-238,327-342,344-365,373-386 5cts d5ctsa_ A:70-78,221-238,327-342,344-365,373-386 6csc d6csca_ A:70-78,221-238,327-342,344-365,373-386 4cts d4ctsb_ B:70-79,221-238,327-342,344-365,373-386 6csc d6cscb_ B:70-78,221-238,327-342,344-365,373-386 4csc d4csca_ A:70-78,221-238,327-342,344-365,373-386 1css d1cssa_ A:70-78,221-238,327-342,344-365,373-386 1csh d1csha_ A:70-78,221-238,327-342,344-365,373-386 2cts d2ctsa_ A:70-78,221-238,327-342,344-365,373-386 6cts d6ctsa_ A:70-78,221-238,327-342,344-365,373-386 1amz d1amza_ A:70-78,221-238,327-342,344-365,373-386 1al6 d1al6a_ A:70-78,221-238,327-342,344-365,373-386 1csr d1csra_ A:70-78,221-238,327-342,344-365,373-386 5csc d5cscb_ B:70-78,221-238,327-342,344-365,374-386 1iom d1ioma_ A:33-41,167-184,265-283,285-300,310-323 1ixe d1ixeb_ B:33-41,167-184,265-280,285-301,310-323 1nxg d1nxgb_ B:1072-1081,1212-1229,1312-1330,1336-1349,1360-1373 1k3p d1k3pa_ A:72-81,212-229,312-330,336-349,360-373 1owb d1owbb_ B:1072-1081,1212-1229,1312-1330,1336-1349,1360-1373 1nxe d1nxea_ A:72-81,212-229,312-330,336-349,360-373 1k3p d1k3pb_ B:72-80,212-229,312-330,336-349,360-373 1nxe d1nxeb_ B:1072-1080,1212-1229,1312-1330,1336-1349,1360-1373 1ixe d1ixed_ D:33-41,167-184,265-277,286-300,310-323 1nxg d1nxga_ A:72-81,212-229,312-330,336-349,360-373 1ixe d1ixec_ C:33-41,167-184,265-278,287-303,310-323 3. a.73.1 Retrovirus capsid protein, N-terminal core domain Retrovirus capsid protein, N-terminal core domain core: 5 helices; bundle 1qrj d1qrj.1 B:16-31,34-49,51-64,64-86,106-125 1m9d d1m9dd_ D:16-31,33-45,48-60,62-85,125-146 1p7n d1p7na_ A:15-30,33-47,49-62,62-88,125-147 1ak4 d1ak4c_ C:416-431,433-445,448-460,462-485,525-545 1m9x d1m9xc_ C:16-31,33-45,48-60,62-85,125-146 1m9y d1m9yc_ C:16-31,33-45,48-60,62-85,125-146 1g03 d1g03a_ A:16-31,34-49,51-64,64-86,106-129 1m9x d1m9xg_ G:16-31,33-45,48-60,62-85,125-146 1m9e d1m9ec_ C:16-31,33-45,48-60,62-85,125-146 1m9f d1m9fc_ C:16-31,33-45,48-59,62-85,125-146 2gol d2golb1 B:148-163,165-177,180-192,194-217,257-278 1ak4 d1ak4d_ D:416-431,433-445,448-460,462-485,525-545 1afv d1afvb_ B:16-31,33-45,48-60,62-85,125-146 1afv d1afva_ A:16-31,33-45,48-60,62-85,125-146 1m9y d1m9yh_ H:16-31,33-45,48-60,62-85,125-146 1m9c d1m9cd_ D:16-31,33-45,48-60,62-85,125-146 2pxr d2pxrc1 C:16-31,33-45,48-60,62-85,125-145 1m9x d1m9xh_ H:16-31,33-45,48-60,62-85,125-146 1m9c d1m9cc_ C:16-31,33-45,48-60,62-85,125-146 1m9f d1m9fd_ D:16-31,33-45,48-60,62-85,125-146 1e6j d1e6jp2 P:16-31,33-45,48-60,62-85,125-146 1m9y d1m9yg_ G:16-31,33-45,48-60,62-85,125-146 2jpr d2jpra1 A:16-31,33-45,48-60,62-85,125-145 1m9y d1m9yd_ D:16-31,33-45,48-60,62-85,125-146 2gol d2gold1 D:148-163,165-177,180-191,194-217,257-278 1m9x d1m9xd_ D:16-31,33-45,48-60,62-85,125-146 1em9 d1em9a_ A:15-30,33-47,49-62,62-88,125-147 1m9e d1m9ed_ D:16-31,33-45,48-60,62-85,125-146 1em9 d1em9b_ B:15-30,33-45,49-62,62-88,125-147 1m9d d1m9dc_ C:16-31,33-45,48-60,62-85,125-146 1d1d d1d1da2 A:15-30,33-47,49-62,62-88,125-147 1l6n d1l6na2 A:148-163,165-177,180-192,194-217,257-278 1u7k d1u7ka_ A:16-28,33-49,51-64,64-79,108-131 1u7k d1u7kf_ F:16-28,33-49,51-64,64-79,108-131 1gwp d1gwpa_ A:16-31,33-45,48-60,62-85,125-147 3dik d3dika2 A:16-31,33-45,48-60,62-85,125-147 1u7k d1u7kc_ C:16-28,33-49,51-64,64-79,108-131 1u7k d1u7kd_ D:16-28,33-49,51-64,64-79,108-131 1u7k d1u7kb_ B:16-28,33-49,51-64,64-79,108-131 1u7k d1u7ke_ E:16-28,33-49,51-64,64-79,108-131 2eia d2eiab2 B:17-31,34-46,49-60,63-86,119-147 2eia d2eiaa2 A:19-31,34-46,49-60,63-86,119-147 1eia d1eiaa2 A:19-30,34-46,49-60,63-86,119-148 5. a.268.1 PTPA-like PTPA-like multihelical 2ixp d2ixpd1 D:169-192,208-223,246-260,267-277,279-299 2ixp d2ixpb1 B:169-192,208-223,246-260,267-278,279-299 2ixp d2ixpc1 C:169-192,208-223,246-260,267-278,279-298 2ixp d2ixpa1 A:169-192,208-223,246-260,267-278,279-299 2hv6 d2hv6b1 B:176-200,216-230,251-265,272-282,283-303 2hv7 d2hv7e1 E:179-200,216-228,251-265,272-282,283-303 2ixo d2ixoa1 A:169-192,208-223,246-260,267-278,279-299 2ixo d2ixob1 B:169-192,208-223,246-259,267-278,279-299 2ixp d2ixpd1 D:64-85,145-163,169-192,208-223,279-299 2ixp d2ixpb1 B:64-85,145-163,169-192,208-223,279-299 2ixp d2ixpa1 A:64-85,145-163,169-192,208-223,279-299 2hv7 d2hv7g1 G:182-200,216-228,251-265,272-282,283-303 2ixo d2ixoa1 A:64-85,145-163,169-192,208-223,279-299 2hv7 d2hv7b1 B:182-200,216-228,251-265,272-282,283-303 2ixo d2ixob1 B:64-85,145-163,169-192,208-223,279-299 2ixp d2ixpc1 C:64-85,145-163,169-192,208-223,279-298 2hv6 d2hv6a1 A:183-200,216-228,251-265,272-282,283-303 2hv7 d2hv7c1 C:183-200,216-228,251-265,272-282,283-303 2g62 d2g62a1 A:183-200,216-228,251-265,272-281,283-303 2ixm d2ixma1 A:183-200,216-228,251-265,272-282,283-303 2ixp d2ixpa1 A:121-137,145-163,169-192,208-223,279-299 2hv7 d2hv7f1 F:183-200,216-228,251-264,272-281,283-303 2hv7 d2hv7a1 A:183-200,216-228,251-264,272-282,283-303 2ixo d2ixoa1 A:121-137,145-163,169-192,208-223,279-299 2hv7 d2hv7h1 H:183-200,216-228,251-264,272-282,283-303 2ixo d2ixob1 B:121-137,145-163,169-192,208-223,279-299 2hv6 d2hv6a1 A:71-92,152-170,183-200,216-228,283-303 2g62 d2g62a1 A:71-92,152-170,183-200,216-228,283-303 2ixm d2ixma1 A:71-92,152-170,183-200,216-228,283-303 2hv7 d2hv7d1 D:71-92,152-170,183-200,216-228,283-303 2hv7 d2hv7a1 A:71-92,152-170,183-200,216-228,283-303 2hv7 d2hv7e1 E:128-144,152-170,179-200,216-228,283-303 2ixn d2ixna1 A:163-181,197-211,232-246,254-263,265-284 2hv6 d2hv6a1 A:128-144,152-170,183-200,216-228,283-303 2hv7 d2hv7b1 B:128-144,152-170,182-200,216-228,283-303 2g62 d2g62a1 A:128-144,152-170,183-200,216-228,283-303 2ixm d2ixma1 A:128-144,152-170,183-200,216-228,283-303 2hv7 d2hv7g1 G:128-144,152-170,182-200,216-228,283-303 2hv7 d2hv7d1 D:128-144,152-170,183-200,216-228,283-303 2hv7 d2hv7h1 H:128-144,152-170,183-200,216-228,283-303 2ixn d2ixnb1 B:164-181,197-211,232-245,254-263,265-284 9. a.121.1 Tetracyclin repressor-like, C-terminal domain Tetracyclin repressor-like, C-terminal domain multihelical; interlocked (homo)dimer 1t33 d1t33a2 A:74-88,91-112,140-157,162-178,196-220 1ui6 d1ui6b2 B:52-79,81-101,122-142,149-162,176-193 2fbq d2fbqa2 A:61-78,85-101,134-150,153-175,191-209 1t33 d1t33b2 B:74-88,91-112,140-157,162-178,196-219 2np5 d2np5d2 D:53-78,80-94,116-142,145-168,172-189 2i10 d2i10b2 B:68-78,80-97,118-147,154-176,178-194 2i10 d2i10a2 A:68-79,80-97,118-147,154-176,178-194 2dtz d2dtza2 A:45-73,74-93,109-125,144-164,167-187 2hq5 d2hq5a2 A:45-73,74-93,109-125,144-164,167-187 1ui5 d1ui5a2 A:52-79,81-101,122-142,149-163,176-193 1qvt d1qvta2 A:45-73,74-93,109-125,144-164,167-187 3btl d3btla2 A:45-73,74-93,109-125,144-164,167-187 1jtx d1jtxa2 A:45-73,74-93,109-125,144-164,167-187 2gby d2gbya2 A:45-73,74-93,109-125,144-164,167-187 3btj d3btja2 A:45-73,74-93,109-125,144-164,167-187 2g0e d2g0ed2 D:45-73,74-93,109-125,144-164,167-187 1jus d1jusa2 A:45-73,74-93,109-125,144-164,167-187 1jum d1juma2 A:45-73,74-93,109-126,144-164,167-187 1rkw d1rkwa2 A:45-73,74-93,109-125,144-164,167-187 3btc d3btca2 A:45-73,74-93,109-125,144-164,167-187 1jup d1jupa2 A:45-73,74-93,109-125,144-164,167-187 1rpw d1rpwb2 B:45-73,74-93,109-125,144-164,167-187 1ui6 d1ui6a2 A:52-79,81-101,122-142,149-162,180-193 1jt6 d1jt6a2 A:45-73,74-93,109-125,144-164,167-187 3bti d3btia2 A:45-73,74-93,109-125,144-164,167-187 3bt9 d3bt9a2 A:45-73,74-93,109-125,144-164,167-187 1jup d1jupe2 E:45-73,74-89,109-128,144-164,167-187 1qvu d1qvua2 A:45-73,74-93,109-125,144-164,167-187 1jus d1jusb2 B:45-73,74-89,109-125,144-164,167-187 1jty d1jtya2 A:45-73,74-93,109-125,144-164,167-187 2np3 d2np3a2 A:82-98,102-122,138-154,161-184,192-210 1jum d1jumb2 B:45-73,74-89,109-125,144-164,167-187 1rpw d1rpwa2 A:45-73,74-89,109-125,144-164,167-187 1jup d1jupb2 B:45-73,74-89,109-125,144-164,167-187 1jt6 d1jt6b2 B:45-73,74-89,109-125,144-164,167-187 2np3 d2np3b2 B:82-98,102-122,141-154,161-184,192-210 2g0e d2g0ea2 A:45-73,74-89,109-125,144-164,167-187 1rkw d1rkwb2 B:45-73,74-89,109-125,144-164,167-187 1qvu d1qvub2 B:45-73,74-89,109-125,144-164,167-187 1qvt d1qvtb2 B:45-73,74-89,109-125,144-164,167-187 1jtx d1jtxb2 B:45-73,74-89,109-125,144-164,167-187 3btc d3btcd2 D:45-73,74-89,109-125,144-164,167-187 2hq5 d2hq5b2 B:45-73,74-89,113-125,144-164,167-187 1jup d1jupd2 D:45-73,74-89,109-125,144-164,167-187 2g0e d2g0eb2 B:45-73,74-89,109-125,144-164,167-187 3btj d3btjb2 B:45-73,74-89,109-125,144-164,167-187 3btl d3btlb2 B:45-73,74-89,109-125,144-164,167-187 1jum d1jumd2 D:45-73,74-89,109-125,144-164,167-187 1jty d1jtyb2 B:45-73,74-89,109-125,144-164,167-187 3bti d3btib2 B:45-73,74-89,109-125,144-164,167-187 2hq5 d2hq5d2 D:45-73,74-89,109-125,144-164,167-187 2gby d2gbyd2 D:45-73,74-89,109-125,144-164,167-187 2o7t d2o7ta2 A:50-81,80-96,113-138,145-159,169-186 3btl d3btld2 D:45-73,74-89,109-125,144-164,167-187 3btj d3btjd2 D:45-73,74-89,109-125,144-164,167-187 3btc d3btcb2 B:45-73,74-89,109-125,144-164,167-187 3bti d3btid2 D:45-73,74-89,109-125,144-164,167-187 2np5 d2np5c2 C:52-77,80-94,116-142,145-168,172-189 2g7g d2g7ga2 A:67-74,75-95,108-126,128-153,177-205 1jt0 d1jt0b2 B:45-73,74-89,109-138,144-164,167-188 2gen d2gena2 A:48-75,77-97,113-135,147-169,174-191 2iu5 d2iu5b2 B:49-69,74-90,100-127,131-157,159-179 2dtz d2dtzd2 D:45-73,74-89,109-125,144-163,167-187 2oi8 d2oi8a2 A:59-86,88-104,121-141,169-193,201-215 1jt0 d1jt0c2 C:45-73,74-89,109-138,144-164,167-188 1jt0 d1jt0a2 A:45-73,74-89,109-138,144-164,167-189 1rkt d1rktb2 B:55-83,83-102,120-149,156-179,184-201 1rkt d1rkta2 A:55-83,83-102,120-149,156-179,184-201 3bt9 d3bt9d2 D:45-73,74-89,109-138,144-164,167-187 1zk8 d1zk8a2 A:51-76,79-99,116-131,133-158,165-182 2gfn d2gfnb2 B:52-78,82-95,118-147,154-177,185-198 1jt0 d1jt0d2 D:45-73,74-89,116-138,144-164,167-186 2np5 d2np5b2 B:52-75,80-94,116-142,145-168,172-189 2np5 d2np5a2 A:52-75,80-94,116-142,145-168,172-189 2g7s d2g7sa2 A:49-77,78-97,115-144,151-174,175-191 1u9o d1u9oa2 A:67-94,98-118,131-160,167-189,195-213 1u9n d1u9na2 A:67-94,98-118,131-160,167-189,195-213 1ui5 d1ui5b2 B:52-75,81-100,122-142,149-163,173-193 1t56 d1t56a2 A:67-94,98-118,131-160,167-189,195-213 1zk8 d1zk8b2 B:51-76,79-99,116-131,133-158,165-183 2iu5 d2iu5a2 A:49-69,73-90,100-127,131-157,159-179 2hku d2hkub2 B:60-87,89-106,122-152,158-179,187-200 2hku d2hkua2 A:60-88,89-106,122-152,158-181,187-200 1jtx d1jtxb2 B:45-73,74-89,124-138,144-164,167-187 1jup d1jupe2 E:45-73,74-89,127-138,144-164,167-187 2dtz d2dtzb2 B:45-73,74-89,124-138,144-164,167-187 1rkw d1rkwb2 B:45-73,74-89,124-138,144-164,167-187 1rkw d1rkwe2 E:45-73,74-89,124-138,144-164,167-187 1jup d1jupd2 D:45-73,74-89,124-138,144-164,167-187 1jty d1jtyb2 B:45-73,74-89,124-138,144-164,167-187 1jup d1jupb2 B:45-73,74-89,124-138,144-164,167-187 2g0e d2g0ea2 A:45-73,74-89,124-138,144-164,167-187 1qvu d1qvud2 D:45-73,74-89,124-138,144-164,167-187 1jt6 d1jt6e2 E:45-73,74-89,124-138,144-164,167-187 1rpw d1rpwd2 D:45-73,74-89,124-138,144-164,167-187 1qvt d1qvta2 A:45-73,74-93,124-138,144-164,167-187 1qvt d1qvtb2 B:45-73,74-89,124-138,144-164,167-187 3btl d3btlb2 B:45-73,74-89,124-138,144-164,167-187 1rkw d1rkwd2 D:45-73,74-89,124-138,144-164,167-187 1rpw d1rpwa2 A:45-73,74-89,124-138,144-164,167-187 1rpw d1rpwc2 C:45-73,74-89,124-138,144-164,167-187 2hq5 d2hq5b2 B:45-73,74-89,124-138,144-164,167-187 1jum d1juma2 A:45-73,74-93,125-138,144-164,167-187 1jus d1jusa2 A:45-73,74-93,124-138,144-164,167-187 1jt6 d1jt6a2 A:45-73,74-93,124-138,144-164,167-187 1jum d1jumd2 D:45-73,74-89,124-138,144-164,167-187 2hq5 d2hq5e2 E:45-73,74-89,124-138,144-164,167-186 1jus d1jusb2 B:45-73,74-89,124-138,144-164,167-187 3btj d3btje2 E:45-73,74-89,124-138,144-164,167-187 2gby d2gbye2 E:45-73,74-89,124-138,144-164,167-187 2hq5 d2hq5d2 D:45-73,74-89,124-138,144-164,167-187 1jus d1juse2 E:45-73,74-89,124-138,144-164,167-187 2g0e d2g0ee2 E:45-73,74-89,124-138,144-164,167-187 3btc d3btcb2 B:45-73,74-89,124-138,144-164,167-187 3btj d3btjb2 B:45-73,74-89,124-138,144-164,167-187 1vi0 d1vi0a2 A:49-77,78-98,123-141,148-171,175-190 3btl d3btle2 E:45-73,74-89,124-138,144-164,167-187 1qvu d1qvua2 A:45-73,74-93,124-138,144-164,167-187 2gby d2gbyb2 B:45-73,74-89,124-138,144-164,167-187 2iek d2ieka2 A:46-74,77-97,125-139,146-170,179-200 1qvu d1qvue2 E:45-73,74-89,124-138,144-164,167-187 1qvu d1qvub2 B:45-73,74-89,124-138,144-164,167-187 1vi0 d1vi0b2 B:49-77,78-98,123-141,148-171,175-190 2gby d2gbyd2 D:45-73,74-89,124-138,144-164,167-187 3bt9 d3bt9e2 E:45-73,74-89,124-138,144-164,167-186 1jtx d1jtxe2 E:45-73,74-89,124-138,144-164,167-187 1jum d1jume2 E:45-73,74-89,124-138,144-164,167-187 1jt6 d1jt6b2 B:45-73,74-89,124-138,144-164,167-187 1jup d1jupa2 A:45-73,74-93,124-138,144-164,167-187 2g0e d2g0ed2 D:45-73,74-93,124-138,144-164,167-187 2dtz d2dtza2 A:45-73,74-93,124-138,144-164,167-187 2dtz d2dtze2 E:45-73,74-89,124-138,144-164,167-187 1jtx d1jtxd2 D:45-73,74-89,124-138,144-164,167-187 1jt6 d1jt6d2 D:45-73,74-89,124-138,144-164,167-187 2dtz d2dtzd2 D:45-73,74-89,124-138,144-163,167-187 2gfn d2gfna2 A:52-78,82-96,120-147,154-177,185-198 2g0e d2g0eb2 B:45-73,74-89,124-138,144-164,167-187 3bti d3btia2 A:45-73,74-93,124-138,144-164,167-187 1rpw d1rpwb2 B:45-73,74-93,124-138,144-164,167-187 1qvt d1qvte2 E:45-73,74-89,124-138,144-164,167-187 2gby d2gbya2 A:45-73,74-93,124-138,144-164,167-187 3btc d3btce2 E:45-73,74-89,124-138,144-164,167-187 3bti d3btib2 B:45-73,74-89,124-138,144-164,167-187 3bti d3btie2 E:45-73,74-89,124-138,144-164,167-187 1jum d1jumb2 B:45-73,74-89,124-138,144-164,167-187 1qvt d1qvtd2 D:45-73,74-89,124-138,144-164,167-187 3btl d3btla2 A:45-73,74-93,124-138,144-164,167-187 3btj d3btja2 A:45-73,74-93,124-138,144-164,167-187 1jty d1jtye2 E:45-73,74-89,124-138,144-164,167-187 2hq5 d2hq5a2 A:45-73,74-93,124-138,144-164,167-187 3bt9 d3bt9a2 A:45-73,74-93,124-138,144-164,167-187 1jtx d1jtxa2 A:45-73,74-93,124-138,144-164,167-187 1jus d1jusd2 D:45-73,74-89,124-138,144-164,167-187 1rkw d1rkwa2 A:45-73,74-93,124-138,144-164,167-187 3btc d3btcd2 D:45-73,74-89,124-138,144-164,167-187 3btl d3btld2 D:45-73,74-89,124-138,144-164,167-187 3btj d3btjd2 D:45-73,74-89,124-138,144-164,167-187 3btc d3btca2 A:45-73,74-93,124-138,144-164,167-187 3bti d3btid2 D:45-73,74-89,124-138,144-164,167-187 1jty d1jtya2 A:45-73,74-93,124-138,144-164,167-187 1sgm d1sgma2 A:49-78,79-98,117-143,145-171,172-188 1jty d1jtyd2 D:45-73,74-89,124-138,144-164,167-187 1sgm d1sgmb2 B:49-78,79-98,117-143,145-171,172-188 2fd5 d2fd5a2 A:50-73,78-92,117-137,138-163,165-179 3c07 d3c07a2 A:62-83,91-111,135-153,158-183,188-212 2g3b d2g3ba2 A:46-68,75-89,111-140,147-169,172-189 2g3b d2g3bb2 B:46-68,75-89,111-140,147-169,172-189 1z77 d1z77a2 A:46-74,77-97,121-140,146-170,179-200 1zkg d1zkga2 A:46-74,77-97,125-140,146-170,179-200 2id6 d2id6a2 A:46-74,77-97,121-140,146-170,179-200 2zoz d2zoza2 A:47-71,76-91,113-121,130-149,158-174 1zkg d1zkgb2 B:46-74,77-97,125-140,146-170,179-200 2hyj d2hyja2 A:55-76,84-103,123-151,158-181,182-200 1t33 d1t33b2 B:54-75,91-112,140-157,162-178,196-219 1t33 d1t33a2 A:54-75,91-112,140-157,162-178,196-220 11. e.75.1 flu NP-like Flu NP-like consists of alpha+beta and all-alpha domains; biological unit is a trimer 2iqh d2iqhb1 B:177-185,185-202,213-231,232-246,249-267 2iqh d2iqha1 A:177-184,185-202,213-231,232-246,249-267 2iqh d2iqhc1 C:177-185,185-203,209-231,232-246,249-267 12. d.379.1 Taf5 N-terminal domain-like Taf5 N-terminal domain-like multihelical cluster with a C-terminal beta-alpha(2)-beta motif; one central buried helix; parallel beta-ribbon 2j49 d2j49a1 A:149-166,177-194,193-209,212-223,231-241 2j4b d2j4bb1 B:17-33,41-60,61-77,79-90,98-107 2nxp d2nxpc1 C:210-228,239-255,256-271,275-286,294-301 2j4b d2j4bc1 C:16-33,34-60,61-73,79-90,98-107 2nxp d2nxpe1 E:210-228,239-255,256-271,275-286,294-301 2nxp d2nxpg1 G:210-228,239-255,256-271,275-286,294-301 2nxp d2nxph1 H:210-228,239-255,256-271,275-286,294-301 2nxp d2nxpb1 B:210-228,239-255,256-271,275-286,294-301 2nxp d2nxpa1 A:210-228,239-255,256-271,275-286,294-301 2nxp d2nxpf1 F:210-228,239-255,256-271,275-286,294-301 2j4b d2j4ba1 A:18-33,37-60,61-76,79-90,98-107 2nxp d2nxpd1 D:210-228,239-255,256-271,272-286,294-301 2nxp d2nxph1 H:210-228,239-255,256-271,275-286,287-294 2nxp d2nxpg1 G:210-228,239-255,256-271,275-286,287-294 2nxp d2nxpe1 E:210-228,239-255,256-271,275-286,287-294 2nxp d2nxpa1 A:210-228,239-255,256-271,275-286,287-294 2nxp d2nxpf1 F:210-228,239-255,256-271,275-286,287-294 2j4b d2j4be1 E:18-33,41-60,61-73,79-89,98-107 2j4b d2j4bd1 D:18-33,37-60,61-73,79-90,98-107 13. a.205.1 Hsp90 co-chaperone CDC37 Hsp90 co-chaperone CDC37 multihelical; consists of 2 all-alpha subdomains connected by a long helix 1us7 d1us7b_ B:155-166,167-179,183-201,202-227,229-244 15. a.296.1 PMT central region-like PMT central region-like multihelical; comprises two four-helical bundles of different topologies and an irregular helical array packed against a small beta-sheet 2ebf d2ebfx1 X:608-624,626-649,651-670,673-684,688-704 2ebh d2ebhx1 X:608-624,626-649,651-670,673-684,688-704 2ec5 d2ec5a1 A:608-624,626-649,651-670,673-684,688-704 2ec5 d2ec5b1 B:608-625,626-649,651-670,673-684,688-704 20. a.78.1 GntR ligand-binding domain-like GntR ligand-binding domain-like core: 6 helices: closed bundle; greek-key; internal pseudo twofold symmetry 1hw2 d1hw2b2 B:79-91,90-112,168-183,182-203,204-228 1hw2 d1hw2a2 A:79-91,90-112,168-183,182-203,204-228 1e2x d1e2xa2 A:79-91,90-121,168-183,182-203,204-227 1hw1 d1hw1a2 A:79-91,90-121,168-183,182-203,204-230 1hw1 d1hw1b2 B:79-91,90-121,168-183,182-203,204-230 1h9t d1h9ta2 A:79-91,93-121,168-183,182-203,204-230 1h9t d1h9tb2 B:79-91,93-121,168-183,182-203,204-230 1h9g d1h9ga2 A:79-90,91-121,168-183,182-203,204-227 25. a.99.1 Cryptochrome/photolyase FAD-binding domain Cryptochrome/photolyase FAD-binding domain multihelical; consists of two all-alpha subdomains 1iqr d1iqra1 A:178-197,211-219,222-234,235-259,343-356 1iqu d1iqua1 A:178-197,211-219,222-234,235-259,343-356 2j09 d2j09a1 A:178-197,211-219,222-234,235-259,343-356 2j07 d2j07a1 A:178-197,211-219,222-234,235-259,343-356 2j08 d2j08a1 A:178-197,211-219,222-234,235-259,343-356 1tez d1tezd1 D:209-224,242-250,253-268,270-298,382-395 1tez d1tezc1 C:209-224,242-250,253-268,270-298,382-395 1tez d1tezb1 B:209-224,242-250,253-268,270-298,382-395 1tez d1teza1 A:209-224,242-250,253-268,270-298,382-395 1qnf d1qnfa1 A:209-224,242-250,253-269,270-298,382-395 1owl d1owla1 A:209-224,242-250,253-269,270-298,382-395 1owm d1owma1 A:209-224,242-250,253-269,270-298,382-395 1own d1owna1 A:209-224,242-250,253-269,270-298,382-395 1owp d1owpa1 A:209-224,242-250,253-269,270-298,382-395 1owo d1owoa1 A:209-224,242-250,253-269,270-298,382-395 1u3d d1u3da1 A:216-231,249-257,260-279,280-308,392-405 26. c.1.13 Malate synthase G TIM beta/alpha-barrel contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 ! the first seven superfamilies have similar phosphate-binding sites 1p7t d1p7tb_ B:588-614,631-649,652-672,687-700,707-722 2jqx d2jqxa1 A:588-614,631-650,652-675,687-700,708-723 1p7t d1p7ta_ A:588-614,631-649,652-672,687-700,707-722 1d8c d1d8ca_ A:588-614,631-649,652-672,687-700,707-722 1n8i d1n8ia_ A:590-616,633-651,654-673,689-702,709-727 2gq3 d2gq3b1 B:590-616,633-651,654-674,689-702,709-726 1n8w d1n8wb_ B:590-616,633-651,654-674,689-702,709-727 1n8w d1n8wa_ A:590-616,633-651,654-676,689-702,709-727 2gq3 d2gq3a1 A:590-616,633-651,654-674,689-702,709-727 33. a.29.3 Acyl-CoA dehydrogenase C-terminal domain-like multidomain flavoprotein; N-terminal domain is all-alpha; the middle domain is open (5,8) barrel ! Bromodomain-like 4 helices; bundle; minor mirror variant of up-and-down topology 1jqi d1jqib1 B:443-454,470-486,485-507,632-674,683-714 3mde d3mdeb1 B:49-60,76-92,91-112,242-281,291-322 3mde d3mdea1 A:49-60,76-92,91-112,242-281,291-322 1ege d1eged1 D:49-60,76-92,91-112,243-281,291-322 1rx0 d1rx0d1 D:52-63,79-95,94-115,239-281,290-321 1rx0 d1rx0c1 C:52-63,79-95,94-115,239-281,290-321 1egd d1egdc1 C:49-60,76-92,91-112,242-281,291-322 1jqi d1jqia1 A:43-54,70-86,85-107,232-274,283-314 1udy d1udya1 A:49-60,76-92,91-112,242-281,291-322 1rx0 d1rx0b1 B:52-63,79-95,94-115,239-281,290-321 1rx0 d1rx0a1 A:52-63,79-95,94-115,239-281,290-321 1egd d1egda1 A:49-60,76-92,91-112,242-281,291-322 2a1t d2a1ta1 A:49-60,76-92,91-112,240-281,291-322 2a1t d2a1td1 D:49-60,76-92,91-112,240-281,291-322 1ege d1egea1 A:49-60,76-92,91-112,240-281,291-322 1egc d1egcc1 C:49-60,76-92,91-112,242-282,291-322 1egc d1egcd1 D:49-60,76-92,91-112,240-281,291-322 1t9g d1t9gd1 D:49-60,76-92,91-112,240-281,291-322 1udy d1udyd1 D:49-60,76-92,91-112,242-281,291-322 2cx9 d2cx9b1 B:40-51,67-83,82-104,235-275,284-315 2cx9 d2cx9d1 D:40-51,67-83,82-104,233-275,284-315 2r0n d2r0na1 A:49-60,75-91,90-112,238-276,285-316 1siq d1siqa1 A:49-60,75-91,90-112,238-276,285-316 1sir d1sira1 A:49-60,75-91,90-112,238-276,285-316 1egc d1egca1 A:49-60,76-92,91-112,243-282,291-322 2cx9 d2cx9a1 A:40-51,67-83,82-104,233-275,284-315 1egc d1egcb1 B:49-60,76-92,91-112,242-282,291-322 2a1t d2a1tb1 B:49-60,76-92,91-112,252-281,291-322 1ege d1egeb1 B:49-60,76-92,91-112,240-282,291-322 2cx9 d2cx9c1 C:40-51,67-83,82-104,235-275,284-315 1egd d1egdb1 B:49-60,76-92,91-112,242-282,291-322 1ivh d1ivhb1 B:47-59,75-91,90-112,241-281,290-321 1ws9 d1ws9a1 A:40-51,67-83,82-104,235-275,284-315 1ws9 d1ws9b1 B:40-51,67-83,82-104,235-275,284-315 1udy d1udyc1 C:49-60,76-92,91-112,240-282,291-322 2a1t d2a1tc1 C:49-60,76-92,91-112,240-282,291-322 1ivh d1ivhd1 D:47-59,75-91,90-112,241-281,290-321 1ivh d1ivhc1 C:47-59,75-91,90-112,241-281,290-321 2d29 d2d29b1 B:40-51,67-83,82-104,235-275,284-315 1ivh d1ivha1 A:47-59,75-91,90-112,241-281,290-321 1r2j d1r2ja1 A:26-37,53-69,68-89,213-252,261-288 1buc d1buca1 A:38-49,68-84,83-105,233-273,282-313 1ukw d1ukwa1 A:69-80,96-112,111-132,257-299,308-339 1buc d1bucb1 B:38-49,68-84,83-105,231-273,282-313 1egd d1egdd1 D:49-60,76-92,91-112,240-282,291-322 1ukw d1ukwb1 B:69-80,96-112,111-132,257-299,308-339 1t9g d1t9ga1 A:49-60,76-92,91-112,255-281,291-322 1t9g d1t9gc1 C:49-60,76-92,91-112,255-281,291-322 3mdd d3mdda1 A:49-60,76-92,91-112,255-281,291-322 3mdd d3mddb1 B:49-60,76-92,91-112,255-281,291-322 1t9g d1t9gb1 B:49-60,76-92,91-112,255-281,291-322 1ege d1egec1 C:49-60,76-92,91-112,255-282,291-322 1udy d1udyb1 B:49-60,76-92,91-112,255-282,291-322 2c12 d2c12b1 B:37-56,72-88,87-107,261-302,313-343 2c12 d2c12f1 F:37-56,72-88,87-107,261-302,313-343 2c0u d2c0ub1 B:37-56,72-88,87-107,261-302,313-344 2c0u d2c0ud1 D:37-56,72-88,87-107,261-302,313-344 2c12 d2c12a1 A:37-56,72-88,87-107,261-302,313-344 2c0u d2c0uc1 C:37-56,72-88,87-107,261-302,313-344 2c12 d2c12d1 D:37-56,72-88,87-107,261-302,313-344 2c12 d2c12c1 C:37-56,72-88,87-107,261-302,313-344 2c12 d2c12e1 E:37-56,72-88,87-107,261-302,313-344 2zaf d2zafd1 D:37-56,72-88,87-107,261-302,313-344 2reh d2rehb1 B:37-56,72-88,87-107,261-302,313-344 2c0u d2c0ua1 A:37-56,72-88,87-107,261-303,313-344 2reh d2rehc1 C:37-56,72-88,87-108,261-302,313-344 2zaf d2zafa1 A:37-56,72-88,87-108,261-302,313-344 2zaf d2zafb1 B:37-56,72-88,87-108,261-302,313-344 2reh d2rehd1 D:37-56,72-88,87-107,261-303,313-344 2zaf d2zafc1 C:37-56,72-88,87-108,261-303,313-344 43. f.41.1 Preprotein translocase SecY subunit duplication: consists of two similar structural parts ! Preprotein translocase SecY subunit 10 transmembrane helices forming of a gated channel 1rh5 d1rh5a_ A:73-92,255-280,312-339,373-396,400-423 1rhz d1rhza_ A:73-92,250-281,312-338,373-396,400-428 44. a.227.1 ERO1-like similar active site architecture to ERO1-like multihelical; consists of 2 four-helical bundles 1rq1 d1rq1a_ A:215-242,264-289,329-351,352-379,392-424 1rp4 d1rp4a_ A:215-242,264-289,329-351,352-379,392-427