1. d.154.1 DmpA/ArgJ-like convergent similarity to the Ntn amidohydrolases !
DmpA/ArgJ-like duplication of beta(3)-alpha-beta-alpha motif; 4 layers: alpha/beta/beta/alpha
1vz7 d1vz7d_ D:264-272,289-299,302-314,323-329,358-367
1vz8 d1vz8c_ C:264-272,289-299,302-314,323-329,358-367
1vz7 d1vz7c_ C:264-273,289-299,302-314,323-329,358-367
1vz7 d1vz7a_ A:264-272,289-299,302-314,323-329,358-367
1vz8 d1vz8a_ A:264-272,289-299,302-314,323-329,358-367
1vz8 d1vz8d_ D:264-272,289-299,302-314,323-329,358-367
1vz7 d1vz7b_ B:264-272,289-299,302-314,323-329,358-367
1vz8 d1vz8b_ B:264-272,289-299,302-314,323-329,358-367
1vz6 d1vz6b_ B:264-272,289-299,302-314,323-329,358-367
1vz6 d1vz6a_ A:264-272,289-299,302-314,323-329,358-367
1vz7 d1vz7a_ A:264-272,275-289,302-314,323-329,358-367
1vz8 d1vz8a_ A:264-272,275-289,302-314,323-329,358-367
1vz7 d1vz7d_ D:264-272,275-289,302-314,323-329,358-367
1vz8 d1vz8d_ D:264-272,275-289,302-314,323-329,358-367
1vz8 d1vz8c_ C:264-272,275-289,302-314,323-329,358-367
1vz6 d1vz6b_ B:264-272,275-289,302-314,323-329,358-367
1vz6 d1vz6a_ A:264-272,275-289,302-314,323-329,358-367
1vz8 d1vz8b_ B:264-272,275-289,302-314,323-329,358-367
1vz7 d1vz7b_ B:264-272,275-289,302-314,323-329,358-367
1vz7 d1vz7c_ C:264-273,275-289,302-314,323-329,358-367
2. d.15.3 MoaD/ThiS possible link between the ubiquitin-like and 2Fe-2S ferredoxin-like superfamilies !
beta-Grasp (ubiquitin-like) core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
1v8c d1v8cd1 D:1-6,6-14,36-45,52-58,76-83
3. d.269.1 Gamma-glutamyl cyclotransferase-like
Gamma-glutamyl cyclotransferase-like beta-alpha-beta(4)-alpha-beta(2); contains beta-sheet barrel (n=5, S=8)
1vkb d1vkba_ A:1-7,16-23,72-83,88-96,108-118
4. d.15.14 NSP3A-like short helical inserions in the common fold
beta-Grasp (ubiquitin-like) core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
2gri d2gria1 A:18-25,29-41,50-68,88-93,101-107
2idy d2idya1 A:18-25,29-41,50-68,88-93,101-107
List of motif hits that are not present in SCOP but are found in PDB for pattern ID: 823 (enumeration index: query486) of S5
4a18 M:14-21,31-43,74-90,94-101,103-110
2vh2 A:60-65,71-83,91-102,105-115,117-126
2vh2 B:59-65,71-83,92-101,105-115,117-126
3po0 A:-1-6,6-14,39-48,56-62,74-83
3p3w B:109-113,276-300,319-333,340-346,347-352
3p3w A:109-113,276-300,319-333,340-346,347-352
4a1d M:14-21,31-43,74-90,94-101,103-110
2qcz B:27-33,38-47,55-70,71-81,82-91
2qcz B:266-276,280-289,297-316,319-329,334-344
2qcz A:92-101,106-118,126-145,148-158,161-172
2qcz A:175-184,189-199,218-234,237-248,252-263
2qcz A:27-33,38-47,55-70,71-81,82-91
2qcz A:266-276,280-289,297-316,319-329,334-344
2qcz B:175-184,189-199,218-234,237-248,252-263
2qcz B:92-101,106-118,129-145,148-159,161-172
2pn7 A:15-22,27-36,87-99,105-115,117-127
2pn7 B:15-22,27-36,87-99,105-115,117-127
2i5t A:15-22,27-36,87-99,105-115,117-127
2i5t B:15-22,27-36,87-99,105-115,117-127
2x8x X:74-80,82-94,102-117,118-129,132-142
2x8x X:219-230,240-249,257-272,273-284,289-299
2x8x X:146-152,157-169,174-193,203-207,209-218
2x8x X:146-152,157-169,174-193,196-200,209-218
3i09 B:139-143,300-321,324-335,342-348,350-354
3i09 A:139-143,300-321,324-335,341-348,350-354
3qi7 A:157-162,329-349,357-370,372-378,384-391
3qi7 B:157-162,329-349,357-370,372-378,384-391
3nnd D:128-133,292-313,316-327,333-341,342-347
3nnd C:128-133,292-313,316-326,334-340,343-347
3nnd A:128-133,292-313,316-326,334-340,343-347
3nnd B:128-133,292-313,316-327,333-341,342-347
2rbh A:15-22,27-36,87-99,105-115,117-127
2rbh B:15-22,27-36,87-99,105-115,117-127
2vzk F:264-272,289-299,302-314,323-329,358-367
2vzk D:264-272,289-299,302-314,323-329,358-367
2vzk D:264-272,275-289,302-314,323-329,358-367
2vzk B:264-272,289-299,302-314,323-329,358-367
2vzk H:264-272,275-289,302-314,323-329,358-367
2vzk B:264-272,275-289,302-314,323-329,358-367
2vzk H:264-272,289-299,302-314,323-329,358-367
2vzk F:264-272,275-289,302-314,323-329,358-367
3mc8 A:220-230,236-247,256-271,272-284,285-296
3mc8 A:300-307,317-329,334-353,356-360,369-378
3mc8 A:300-307,317-329,334-353,363-367,369-378
3mc8 A:379-388,407-416,424-439,440-451,456-466
3q6b A:266-276,280-289,297-316,319-331,332-344
3q6b A:347-356,361-369,378-393,396-405,410-420
3efc A:23-31,38-46,55-70,71-81,82-91
3efc A:92-101,106-118,126-145,148-159,161-172
3efc A:176-184,189-197,212-234,237-248,253-263
3efc A:266-276,280-289,297-316,319-331,332-344
3it4 B:284-292,309-319,322-333,341-347,369-378
3it4 D:284-292,295-309,322-333,340-347,369-378
3it4 B:284-292,295-309,322-333,341-347,369-378
3it4 D:284-292,309-319,322-333,340-347,369-378
4a1b M:14-21,31-43,74-90,94-101,103-110
2g1e A:1-8,8-15,39-48,56-61,79-85
2qdf A:92-101,106-118,126-145,148-159,161-172
2qdf A:175-184,189-199,218-234,237-248,252-263
2qdf A:27-33,38-47,55-70,71-81,82-91
2qdf A:266-276,280-289,297-316,319-331,332-344
3dwg C:2-7,8-16,39-48,58-64,81-89
3mc9 A:220-230,236-247,256-271,272-284,285-296
3mc9 A:300-306,317-329,334-353,356-360,369-378
3mc9 A:300-306,317-329,334-353,363-367,369-378
3mc9 B:220-230,236-247,256-271,272-284,285-296
3mc9 B:300-307,317-329,334-353,363-367,369-377
4a19 M:14-21,31-43,74-90,94-101,103-110
2v4i D:264-272,289-299,302-314,323-329,351-360
2v4i F:264-272,275-289,302-314,323-329,351-360
2v4i B:264-272,289-299,302-314,323-329,351-360
2v4i H:264-272,275-289,302-314,323-329,351-360
2v4i H:264-272,289-299,302-314,323-329,351-360
2v4i B:264-272,275-289,302-314,323-329,351-360
2v4i F:264-272,289-299,302-314,323-329,351-360
2v4i D:264-272,275-289,302-314,323-329,351-360
3it6 D:284-292,309-319,322-333,341-347,369-378
3it6 D:284-292,295-309,322-333,341-347,369-378
3it6 B:284-292,309-319,322-333,341-347,369-378
3it6 B:284-292,295-309,322-333,341-347,369-378
3njt A:134-142,148-160,168-181,183-193,197-208
3njt A:62-68,77-85,90-109,113-118,125-133
3dwm A:2-7,8-16,39-48,58-64,81-89
3n0w A:138-142,300-321,324-335,344-349,351-355
3n0w B:138-142,300-321,324-335,344-349,351-355
3og5 A:347-356,361-369,378-393,394-405,410-421
3og5 B:272-277,279-289,297-316,319-325,338-344
3og5 A:266-276,280-289,297-316,319-331,332-344
2yep F:264-272,289-299,302-314,323-329,358-367
2yep F:264-272,275-290,302-314,323-329,358-367
2yep D:264-272,289-299,302-314,323-329,358-368
2yep H:264-272,275-289,302-314,323-329,358-367
2yep D:264-272,275-289,302-314,323-329,358-368
2yep B:264-272,289-299,302-314,323-329,358-367
2yep B:264-272,275-289,302-314,323-329,358-367
2yep H:264-272,289-299,302-314,323-329,358-367
2qdz A:134-142,148-160,168-181,183-193,197-208
2j4x A:102-114,118-126,135-150,164-172,197-206
2v9h A:92-101,106-118,126-146,148-159,161-172
2v9h A:27-33,38-47,55-70,73-81,82-91
3cry A:15-22,27-36,87-99,105-115,117-127
3cry B:15-22,27-36,87-99,105-115,117-127
2vh1 A:58-64,70-82,91-104,105-115,117-126
2vh1 B:58-64,70-82,91-104,105-115,117-126
1vra B:287-295,298-312,325-337,343-350,376-385
1vra B:287-295,312-322,325-337,343-350,376-385