1. d.92.1 Metalloproteases ("zincins"), catalytic domain
Zincin-like contains mixed beta sheet with connection over free side of the sheet
1jiz d1jiza_ A:59-66,82-88,93-100,112-126,126-131
1jiz d1jizb_ B:59-66,82-87,93-100,112-126,126-131
2. c.37.1 P-loop containing nucleoside triphosphate hydrolases division into families based on beta-sheet topologies !
P-loop containing nucleoside triphosphate hydrolases 3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
2dy1 d2dy1a2 A:7-16,63-72,73-82,87-99,344-352
1wdt d1wdta2 A:7-16,63-72,73-82,87-99,344-352
2p8z d2p8zt2 T:18-26,70-81,96-104,112-122,377-388
2dy1 d2dy1a2 A:7-16,63-72,73-82,87-99,284-294
2aho d2ahoa3 A:9-16,48-59,83-95,100-111,213-222
1wdt d1wdta2 A:7-16,63-72,73-82,87-99,284-295
1ttt d1tttb3 B:10-18,65-73,74-82,88-99,221-228
2qmu d2qmua3 A:9-16,48-59,83-95,100-111,213-222
2p8z d2p8zt2 T:18-26,70-81,96-104,112-122,450-458
2bm0 d2bm0a2 A:11-19,68-75,76-83,90-102,371-379
1zm4 d1zm4a2 A:18-26,73-81,96-104,111-122,450-458
1zm3 d1zm3a2 A:18-26,73-81,96-104,111-122,450-458
1n0v d1n0vc2 C:18-26,73-81,96-104,111-122,450-458
1zm3 d1zm3e2 E:18-26,73-81,96-104,111-122,450-458
1zm4 d1zm4e2 E:18-26,73-81,96-104,111-122,450-458
1zm2 d1zm2e2 E:18-26,73-81,96-104,111-122,450-458
1zm9 d1zm9e2 E:18-26,73-81,96-104,111-122,450-458
1n0u d1n0ua2 A:18-26,73-81,96-104,112-122,450-458
1zm4 d1zm4c2 C:18-26,73-81,96-104,111-122,450-458
1zm9 d1zm9a2 A:18-26,73-81,96-104,111-122,450-458
1u2r d1u2ra2 A:18-26,73-81,96-104,112-122,450-458
1zm9 d1zm9c2 C:18-26,73-81,96-104,111-122,450-458
1zm3 d1zm3c2 C:18-26,73-81,96-104,111-122,450-458
1zm2 d1zm2c2 C:18-26,73-81,96-104,111-122,450-458
1n0v d1n0vd2 D:18-26,73-81,96-104,111-122,450-458
2npf d2npfb2 B:18-26,73-81,96-104,111-122,450-458
1eft d1efta3 A:10-18,64-73,74-83,88-99,221-232
2p8x d2p8xt2 T:18-26,73-81,96-104,112-122,450-458
2npf d2npfa2 A:18-26,73-81,96-104,111-122,450-458
2e1r d2e1ra2 A:18-26,73-81,96-104,110-122,450-458
1s0u d1s0ua3 A:36-44,77-89,106-117,119-130,236-245
1ob5 d1ob5c3 C:10-18,65-73,74-82,88-99,226-231
1ob5 d1ob5a3 A:10-18,65-73,74-82,88-99,226-231
1ob5 d1ob5e3 E:10-18,65-73,74-82,88-99,226-231
3. i.1.1 Ribosome and ribosomal fragments
Ribosome and ribosomal fragments
1s1h d1s1ht_ T:18-26,73-81,96-104,112-122,450-458
List of motif hits that are not present in SCOP but are found in PDB for pattern ID: 448 (enumeration index: query496) of S5
2y6c A:158-165,181-186,192-199,212-226,226-231
2y6d A:158-165,181-186,192-199,212-226,226-231
3fih Z:10-18,62-72,73-82,87-99,210-220
3b82 C:18-26,73-81,96-104,111-122,450-458
3b82 A:18-26,73-81,96-104,111-122,450-458
2y12 Z:10-18,64-73,74-83,88-100,220-232
2y16 Z:10-18,64-73,74-83,88-99,220-232
3dny T:18-26,73-81,96-104,112-122,450-458
2dcu A:10-18,51-63,81-91,93-105,210-219
3p3m E:10-16,49-59,83-94,96-107,213-222
3p3m A:8-16,49-59,83-94,96-107,213-222
3p3m F:9-16,48-59,83-95,96-107,213-222
3p3m D:9-16,49-59,83-94,96-107,213-222
3p3m B:10-16,48-59,83-95,96-107,213-222
2o0f A:13-20,73-80,81-88,96-106,296-305
3pen A:10-16,49-59,83-95,100-111,213-222
2y0y Z:10-18,64-73,74-83,88-100,220-232
3b8h C:18-26,73-81,96-104,111-122,450-458
3b8h A:18-26,73-81,96-104,111-122,450-458
2ywh A:5-13,59-68,70-79,86-97,254-262
2wb5 B:102-109,131-139,140-148,148-164,166-170
3b78 C:18-26,73-81,96-104,111-122,450-458
3b78 A:18-26,73-81,96-104,111-122,450-458
3cb4 A:3-11,57-66,68-77,84-95,252-260
3cb4 B:3-11,57-66,68-77,84-95,252-260
3cb4 D:3-11,57-66,68-77,84-95,252-260
3cb4 C:3-11,57-66,68-77,84-95,252-260
3cb4 F:3-11,57-66,68-77,84-95,254-260
3cb4 E:3-11,57-66,68-77,84-95,252-260
2ywe A:5-13,59-68,70-79,86-97,254-262
3tr5 B:10-17,70-77,78-85,93-103,358-366
3tr5 A:10-17,70-77,78-85,93-103,358-366
3tr5 D:10-17,70-77,78-85,93-103,358-366
3p27 A:166-174,235-243,244-252,259-269,401-409
3p27 B:166-174,235-243,244-252,258-269,401-409
2elf A:0-8,29-36,40-48,53-65,173-182
2d74 A:10-18,51-63,81-91,93-105,210-219
2v5d A:102-109,131-139,140-147,148-164,166-170
2h5e A:13-20,73-80,81-88,96-107,361-370
2h5e B:13-20,73-80,81-88,96-106,361-369
3p26 B:166-174,234-243,244-253,257-269,401-409
3agj E:4-13,73-82,83-92,97-108,232-243
3agj G:4-13,73-82,83-92,97-108,233-243
3agj A:5-13,73-82,83-92,97-108,233-243
2ywf A:5-13,59-68,70-79,86-97,254-262
2ywg A:6-13,59-68,70-79,86-97,254-262
2zit C:18-26,73-81,96-104,111-122,450-458
2zit A:18-26,73-81,96-104,111-122,450-458