List of the counted superfamily hits for pattern ID: 3 (enumeration index: query5.6) of S5

List of the counted superfamily hits for pattern ID: 3 (enumeration index: query5.6) of S5

SCOP superfamily ID superfamiily description corresponding fold description
b.29.1Concanavalin A-like lectins/glucanases Concanavalin A-like lectins/glucanases sandwich; 12-14 strands in 2 sheets; complex topology
b.69.6Clathrin heavy-chain terminal domain 7-bladed beta-propeller consists of seven 4-stranded beta-sheet motifs; meander
b.69.3Nitrous oxide reductase, N-terminal domain 7-bladed beta-propeller consists of seven 4-stranded beta-sheet motifs; meander
b.68.5YWTD domain 6-bladed beta-propeller consists of six 4-stranded beta-sheet motifs; meander
d.153.1N-terminal nucleophile aminohydrolases (Ntn hydrolases) N-terminal residue provides two catalytic groups, nucleophile and proton donor ! Ntn hydrolase-like 4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
b.30.5Galactose mutarotase-like probable carbohydrate-binding domain in enzymes acting on sugars ! Supersandwich sandwich; 18 strands in 2 sheets
b.69.2YVTN repeat-like/Quinoprotein amine dehydrogenase 7-bladed beta-propeller consists of seven 4-stranded beta-sheet motifs; meander
b.70.3DPP6 N-terminal domain-like 8-bladed beta-propeller consists of eight 4-stranded beta-sheet motifs; meander ! also found in some members of the WD40-repeat superfamily
d.157.1Metallo-hydrolase/oxidoreductase Metallo-hydrolase/oxidoreductase duplication of beta(4)-alpha-beta-alpha motif; 4 layers a/b/b/a; mixed beta-sheets
b.70.1Quinoprotein alcohol dehydrogenase-like 8-bladed beta-propeller consists of eight 4-stranded beta-sheet motifs; meander ! also found in some members of the WD40-repeat superfamily
d.153.2Archaeal IMP cyclohydrolase PurO has a putative active site in the same topological location as the Ntn hydrolase but lacks the N-terminal nucleophile ! Ntn hydrolase-like 4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
d.18.1ssDNA-binding transcriptional regulator domain ssDNA-binding transcriptional regulator domain helix-swapped dimer of beta(4)-alpha motifs
b.68.4TolB, C-terminal domain 6-bladed beta-propeller consists of six 4-stranded beta-sheet motifs; meander
b.26.1SMAD/FHA domain has a few short helices inserted in loops ! SMAD/FHA domain sandwich; 11 strands in 2 sheets; greek-key
b.24.1Hyaluronate lyase-like, C-terminal domain Hyaluronate lyase-like, C-terminal domain sandwich, 10 strands in 2 sheets; "folded meander"
b.130.1Heat shock protein 70kD (HSP70), peptide-binding domain Heat shock protein 70kD (HSP70), peptide-binding domain beta-sandwich: 8 strands in 2 sheets
b.68.1Sialidases 6-bladed beta-propeller consists of six 4-stranded beta-sheet motifs; meander
b.68.7Tricorn protease N-terminal domain possibly related to the second domain of tricorn protease (a distorted 7-bladed beta-propeller) ! 6-bladed beta-propeller consists of six 4-stranded beta-sheet motifs; meander
b.70.2C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 8-bladed beta-propeller consists of eight 4-stranded beta-sheet motifs; meander ! also found in some members of the WD40-repeat superfamily
b.116.1Viral chemokine binding protein m3 Viral chemokine binding protein m3 consists of two different beta-sandwich domains of partial topological similarity to immunoglobulin-like folds
d.36.1Chalcone isomerase Chalcone isomerase beta(3)-alpha(2)-beta-alpha(2)-beta3; 2 layers alpha/beta; antiparallel sheet: order 1234567
b.47.1Trypsin-like serine proteases Trypsin-like serine proteases barrel, closed; n=6, S=8; greek-key ! duplication: consists of two domains of the same fold
b.67.1Tachylectin-2 5-bladed beta-propeller consists of five 4-stranded beta-sheet motifs; meander
b.8.1TRAF domain-like has a circularly permuted immunoglobulin-fold topology with extra strand ! TRAF domain-like sandwich; 8 strands in 2 sheets; greek-key
b.68.11Kelch motif 6-bladed beta-propeller consists of six 4-stranded beta-sheet motifs; meander
b.78.1alpha-D-mannose-specific plant lectins beta-Prism II consists of 3 4-stranded sheets; strands are perpendicular to the 3-fold axis ! duplication: consists of two domains of this fold
b.67.3Apyrase distorted propeller with an alpha helix inserted between the second and third blades ! 5-bladed beta-propeller consists of five 4-stranded beta-sheet motifs; meander
b.69.11Putative isomerase YbhE 7-bladed beta-propeller consists of seven 4-stranded beta-sheet motifs; meander
d.156.1S-adenosylmethionine decarboxylase S-adenosylmethionine decarboxylase duplication of beta-alpha-beta(4)-alpha-beta-alpha-beta(2) motif; 4 layers a/b/b/a; antiparallel beta-sheets: order 23451687
b.69.14Nucleoporin domain 7-bladed beta-propeller consists of seven 4-stranded beta-sheet motifs; meander
b.69.1Galactose oxidase, central domain 7-bladed beta-propeller consists of seven 4-stranded beta-sheet motifs; meander
b.67.2Arabinanase/levansucrase/invertase 5-bladed beta-propeller consists of five 4-stranded beta-sheet motifs; meander
b.150.1Putative glucosidase YicI, C-terminal domain Putative glucosidase YicI, C-terminal domain sandwich; 10 strands in two sheets
b.30.2Amine oxidase catalytic domain Supersandwich sandwich; 18 strands in 2 sheets
f.10.1Viral glycoprotein, central and dimerisation domains Viral glycoprotein, central and dimerisation domains 2 intertwined domains; all-beta and alpha+beta
d.127.1Creatinase/aminopeptidase Creatinase/aminopeptidase duplication: composed of two very similar alpha+beta folds
b.30.6V-region of surface antigen I/II (SA I/II, PAC) Supersandwich sandwich; 18 strands in 2 sheets
d.280.1Sulfolobus fructose-1,6-bisphosphatase-like Sulfolobus fructose-1,6-bisphosphatase-like 4 layers: a/b/b/a; antiparallel beta sheets; similarities to ferredoxin-like fold (scop_cf 54861) in the N-terminal part (1-120) and to the Bacterial S-adenosylmethionine decarboxylase subunit (scop_fa 997656) in the C-terminal part (121-340)
f.47.1VP4 membrane interaction domain VP4 membrane interaction domain 2 domains; d1: complexed all-beta fold; d2: coiled-coil (trimeric) helical region
f.4.3Porins Transmembrane beta-barrels not a true fold, gathers together transmembrane barrels of different (n,S)
b.1.19Antigen MPT63/MPB63 (immunoprotective extracellular protein) Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
d.103.1CytB endotoxin-like CytB endotoxin-like core: beta-alpha(2)-beta-alpha(2)-beta(4); 3 layers: a/b/a