1. e.3.1 beta-lactamase/transpeptidase-like
beta-lactamase/transpeptidase-like contains a cluster of helices and an alpha+beta sandwich
1fr6 d1fr6b_ B:25-35,279-289,321-331,332-342,345-361
1fr1 d1fr1b_ B:25-35,279-289,321-331,332-342,345-361
2pu2 d2pu2a1 A:26-35,279-289,321-331,332-342,345-361
2hdu d2hdub1 B:26-35,279-289,321-331,332-342,345-361
1ll5 d1ll5b_ B:26-35,279-289,321-331,332-342,345-361
1xgj d1xgjb1 B:26-35,279-289,321-331,332-342,345-361
1l2s d1l2sb_ B:26-35,279-289,321-331,332-342,345-361
2pu4 d2pu4b1 B:26-35,279-289,321-331,332-342,345-361
1ga9 d1ga9b_ B:27-35,279-288,321-331,332-342,345-361
1ga9 d1ga9a_ A:26-35,279-289,321-331,332-342,345-361
1fco d1fcob_ B:23-32,276-286,318-328,329-339,342-358
1ll9 d1ll9b_ B:26-35,279-289,321-331,332-342,345-361
1kvm d1kvmb_ B:26-35,279-289,321-331,332-342,345-361
2rcx d2rcxa1 A:26-35,279-289,321-331,332-342,345-361
1q2q d1q2qa_ A:26-35,282-291,324-334,335-345,348-364
2i72 d2i72a1 A:26-35,279-289,321-331,332-342,345-361
1mxo d1mxoa_ A:26-35,279-289,321-331,332-342,345-361
1i5q d1i5qb_ B:26-35,279-289,321-331,332-342,345-361
1fsw d1fswa_ A:26-35,279-289,321-331,332-342,345-361
1l2s d1l2sa_ A:26-35,279-288,321-331,332-342,345-361
1rgz d1rgza_ A:26-35,282-291,324-334,335-345,348-364
2q9m d2q9ma1 A:26-35,279-288,321-331,332-342,345-360
1rgy d1rgya_ A:26-35,279-289,321-331,332-342,345-361
1xgi d1xgib1 B:26-35,279-289,321-331,332-342,345-361
1fr6 d1fr6a_ A:26-35,279-288,321-331,332-342,345-361
1bls d1blsb_ B:26-35,279-288,321-331,332-342,345-360
1my8 d1my8b_ B:26-35,279-289,321-331,332-342,345-361
1fcn d1fcnb_ B:23-32,276-286,318-328,329-339,342-358
1iem d1iema_ A:26-35,279-289,321-331,332-342,345-361
1bls d1blsa_ A:26-35,279-288,321-331,332-342,345-360
1llb d1llbb_ B:26-35,279-289,321-331,332-342,345-361
1my8 d1my8a_ A:26-35,279-289,321-331,332-342,345-361
1fsy d1fsyb_ B:26-35,279-289,321-331,332-342,345-361
1iem d1iemb_ B:26-35,279-289,321-331,332-342,345-361
1gce d1gcea_ A:26-35,282-291,324-334,335-345,348-364
2p9v d2p9vb1 B:26-35,279-289,321-331,332-342,345-361
1kds d1kdsa_ A:26-35,279-288,321-331,332-342,345-361
1iel d1ielb_ B:26-35,279-289,321-331,332-342,345-361
2rcx d2rcxb1 B:26-35,279-289,321-331,332-342,345-361
2hdu d2hdua1 A:26-35,279-288,321-331,332-342,345-361
1fsw d1fswb_ B:26-35,279-289,321-331,332-342,345-361
1ke0 d1ke0a_ A:26-35,279-288,321-331,332-342,345-361
1fcm d1fcmb_ B:23-32,276-285,318-328,329-339,342-358
2r9w d2r9wa1 A:26-35,279-289,321-331,332-342,345-361
1onh d1onha_ A:26-35,282-292,324-334,335-345,348-364
1ke4 d1ke4b_ B:26-35,279-289,321-331,332-342,345-361
1ke3 d1ke3b_ B:26-35,279-289,321-331,332-342,345-361
2r9x d2r9xa1 A:26-35,279-289,321-331,332-342,345-361
2pu4 d2pu4a1 A:26-35,279-289,321-331,332-342,345-361
1l0d d1l0db_ B:26-35,279-289,321-331,332-342,345-361
2pu2 d2pu2b1 B:26-35,279-289,321-331,332-342,345-361
1fsy d1fsya_ A:26-35,279-289,321-331,332-342,345-361
1l0f d1l0fb_ B:26-35,279-289,321-331,332-342,345-361
1l0g d1l0gb_ B:26-35,279-289,321-331,332-342,345-361
2bls d2blsa_ A:26-35,279-288,321-331,332-342,345-360
1ke0 d1ke0b_ B:26-35,279-289,321-331,332-342,345-361
1xx2 d1xx2a_ A:26-35,279-288,321-331,332-342,345-360
1o07 d1o07b_ B:26-35,279-289,321-331,332-342,345-361
2hdq d2hdqb1 B:26-35,279-289,321-331,332-342,345-361
1fr1 d1fr1a_ A:26-35,279-288,321-331,332-342,345-361
1mxo d1mxob_ B:26-35,279-289,321-331,332-342,345-361
2q9n d2q9na1 A:26-35,279-288,321-331,332-342,345-360
3bls d3blsb_ B:26-35,279-288,321-331,332-342,345-360
1s6r d1s6ra_ A:26-35,279-289,321-331,332-342,345-361
1ke3 d1ke3a_ A:26-35,279-289,321-331,332-342,345-361
1kvl d1kvlb_ B:26-35,279-289,321-331,332-342,345-361
1kvl d1kvla_ A:26-35,279-288,321-331,332-342,345-361
2r9w d2r9wb1 B:26-35,279-289,321-331,332-342,345-361
2hds d2hdsb1 B:26-35,279-289,321-331,332-342,345-361
1kdw d1kdwa_ A:26-35,279-288,321-331,332-342,345-361
1ll9 d1ll9a_ A:26-35,279-289,321-331,332-342,345-361
1l0e d1l0eb_ B:26-35,279-289,321-331,332-342,345-361
2ffy d2ffyb1 B:26-35,279-289,321-331,332-342,345-361
1kdw d1kdwb_ B:26-35,279-289,321-331,332-342,345-361
1xx2 d1xx2b_ B:1026-1035,1279-1289,1321-1331,1332-1342,1345-1360
2bls d2blsb_ B:26-35,279-289,321-331,332-342,345-360
1pi4 d1pi4b_ B:26-35,279-289,321-331,332-342,345-361
1kds d1kdsb_ B:26-35,279-289,321-331,332-342,345-361
1llb d1llba_ A:26-35,279-289,321-331,332-342,345-361
1c3b d1c3ba_ A:26-35,279-288,321-331,332-342,345-361
1pi5 d1pi5b_ B:26-35,279-289,321-331,332-342,345-361
3bls d3blsa_ A:26-35,279-289,321-331,332-342,345-360
1c3b d1c3bb_ B:26-35,279-289,321-331,332-342,345-361
2r9x d2r9xb1 B:26-35,279-289,321-331,332-342,345-361
2hdr d2hdrb1 B:26-35,279-288,321-331,332-342,345-361
1kvm d1kvma_ A:26-35,279-286,321-331,332-342,345-361
2. d.85.1 RNA bacteriophage capsid protein
RNA bacteriophage capsid protein 6-standed beta-sheet followed with 2 helices; meander
2vtu d2vtuj1 J:82-93,116-125,182-193,211-222,225-241
2vtu d2vtuj1 J:82-93,97-113,182-193,211-222,244-253
2vtu d2vtuj1 J:82-93,97-113,182-193,211-222,225-241
2vtu d2vtul1 L:74-94,116-124,182-201,202-222,225-241
2vtu d2vtul1 L:74-94,97-113,182-201,202-222,244-252
2vtu d2vtul1 L:74-94,97-113,182-201,202-222,225-241
3. b.43.3 Translation proteins
Reductase/isomerase/elongation factor common domain barrel, closed; n=6, S=10; greek-key
3cd6 d3cd6b1 B:35-47,120-135,136-147,159-169,170-185
1yit d1yitb1 B:36-40,120-135,136-147,159-168,170-185
1vq6 d1vq6b1 B:36-49,120-135,136-147,159-167,170-185
3cme d3cmeb1 B:32-40,120-135,136-148,158-167,170-185
3cma d3cmab1 B:32-40,120-135,136-148,158-167,170-185
2otj d2otjb1 B:32-40,120-135,136-147,159-167,170-185
3ccs d3ccsb1 B:32-40,120-135,136-147,159-167,170-185
2qex d2qexb1 B:36-40,120-135,136-147,159-167,170-185
4. d.77.1 RL5-like
RL5-like beta-alpha-beta(2)-alpha-beta(3)-alpha; 2 layers, alpha/beta; antiparallel beta-sheet: order 231654
2ogk d2ogkd1 D:4-16,75-86,94-101,118-127,131-144
2ogk d2ogka1 A:4-16,75-86,94-101,118-127,131-144
2pzz d2pzza1 A:2-12,63-75,78-85,103-110,115-125
5. c.69.1 alpha/beta-Hydrolases many members have left-handed crossover connection between strand 8 and additional strand 9 !
alpha/beta-Hydrolases core: 3 layers, a/b/a; mixed beta-sheet of 8 strands, order 12435678, strand 2 is antiparallel to the rest
5tgl d5tgla_ A:5-9,203-210,217-227,230-237,241-249
1lgy d1lgyb_ B:5-9,204-211,220-226,231-239,241-249
6. d.348.1 YegP-like
YegP-like comprises two subunits or tandem repeats of beta(3)-alpha-beta motifs; these assemble with the formation of a single beta-sheet and swapping of the C-terminal strands
2k8e d2k8ea2 A:40-50,51-69,80-89,91-101,102-120
2k49 d2k49a1 A:24-34,35-53,64-73,75-85,86-103
List of motif hits that are not present in SCOP but are found in PDB for pattern ID: 777 (enumeration index: query526) of S5
3s22 A:52-61,306-315,348-358,359-369,372-389
2vz8 B:1114-1124,1452-1463,1502-1508,1509-1519,2031-2052
2vz8 A:1114-1124,1452-1463,1502-1508,1509-1519,2031-2052
3gvb B:26-35,279-289,321-331,332-342,345-361
3gvb A:26-35,279-288,321-331,332-342,345-361
3o87 B:26-35,279-289,321-331,332-342,345-361
3gqz B:26-35,279-289,321-331,332-342,345-361
1zc2 A:26-35,279-289,321-331,332-342,345-361
1zc2 B:26-35,279-288,321-331,332-342,345-361
3s1y A:52-61,306-315,348-358,360-369,372-389
3i55 B:32-49,120-135,136-147,159-167,170-185
3c9g A:187-197,246-258,261-268,288-297,299-309
3ixg B:26-35,279-288,321-331,332-342,345-361
3g4s B:35-49,120-135,136-147,159-169,170-185
3grj B:26-35,279-289,321-331,332-342,345-361
3grj A:26-35,279-288,321-331,332-342,345-361
3g71 B:35-40,120-135,136-147,159-169,170-185
3fkv B:26-35,279-289,321-331,332-342,345-361
3fkv A:26-35,279-287,321-331,332-342,345-361
3fkw B:26-35,279-289,321-331,332-342,345-361
3iwo B:26-35,279-289,321-331,332-342,345-361
3iwq B:26-35,279-289,321-331,332-342,345-361
2wzx A:52-61,306-315,348-358,359-369,372-389
1y54 A:26-35,279-289,321-331,332-342,345-361
2wzz A:52-61,306-315,348-358,359-369,372-388
3gsg B:26-35,279-289,321-331,332-342,345-361
3bm6 A:26-35,279-289,321-331,332-342,345-361
3bm6 B:26-35,279-289,321-331,332-342,345-361
2qz6 A:26-35,279-288,321-331,332-342,345-360
3qp9 C:7-16,148-166,198-204,205-215,391-407
3qp9 B:7-16,148-166,198-204,205-215,391-407
3qp9 D:7-16,148-166,198-204,205-215,391-408
3qp9 A:7-16,148-166,198-204,205-215,391-407
3iwi B:26-35,282-292,324-334,335-345,348-364
3ixh B:26-35,279-289,321-331,332-342,345-361
3ixb B:26-35,279-289,321-331,332-342,345-361
3gr2 B:26-35,279-289,321-331,332-342,345-361
2vz9 A:1114-1124,1452-1463,1502-1508,1509-1519,2031-2052
2vz9 B:1114-1124,1452-1463,1502-1508,1509-1519,2031-2052
3o88 A:26-35,279-289,321-331,332-342,345-361
3o88 B:26-35,279-289,321-331,332-342,345-361
3o86 B:26-35,279-289,321-331,332-342,345-361
1zkj A:27-36,279-288,318-328,329-339,342-359
2zc7 A:26-35,279-288,321-331,332-342,345-360
2zc7 B:26-35,279-288,321-331,332-342,345-360
2zc7 D:26-35,279-289,321-331,332-342,345-360
2zc7 C:26-35,279-288,321-331,332-342,345-360
3gtc A:26-35,279-289,321-331,332-342,345-361
3gtc B:26-35,279-289,321-331,332-342,345-361
3gv9 A:26-35,279-289,321-331,332-342,345-361
3gv9 B:26-35,279-289,321-331,332-342,345-361
2pzz B:2-12,63-75,78-85,103-110,115-125