Observed motif hits of pattern ID: 1055 (enumeration index: query533) of S5

List of motif hits assigned to SCOP superfamilies for pattern ID: 1055 (enumeration index: query533) of S5
The counted superfamily is marked in red

1.   d.3.1         Cysteine proteinases  the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet !   
                   Cysteine proteinases consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn
                   1xd3  d1xd3c_  C:12-24,48-58,93-108,141-155,222-230
                   1xd3  d1xd3a_  A:12-24,48-58,93-108,141-155,222-229
                   2etl  d2etlb1  B:9-21,45-55,89-103,136-151,214-221
                   2etl  d2etla1  A:9-21,45-55,89-103,136-151,214-222
                   1cmx  d1cmxa_  A:14-26,52-61,89-103,131-146,226-234
                   1cmx  d1cmxc_  C:414-426,452-460,489-503,531-546,626-634

2.   c.66.1        S-adenosyl-L-methionine-dependent methyltransferases    
                   S-adenosyl-L-methionine-dependent methyltransferases core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest
                   1rjg  d1rjga_  A:71-97,279-285,285-295,295-307,321-330

List of motif hits that are not present in SCOP but are found in PDB for pattern ID: 1055 (enumeration index: query533) of S5

3i2m  X:19-27,164-169,169-184,248-261,264-272
3kvf  A:9-21,45-55,89-103,136-151,214-222
3sqa  A:14-26,48-57,84-101,133-145,217-226
3sqa  B:14-26,48-57,84-101,133-145,217-226
3rii  B:14-26,48-57,84-100,133-144,217-226
3rii  A:14-26,48-57,84-100,133-144,217-226
3ris  C:14-26,48-57,84-101,133-150,217-226
3ris  A:14-26,48-57,87-100,133-151,217-226
3ris  B:14-26,48-57,87-100,133-151,217-226
3ris  D:14-26,48-57,84-101,133-151,217-226
3ifw  A:9-21,45-55,89-103,136-151,214-222
3irt  B:9-21,45-55,89-103,136-150,214-222
3irt  A:9-21,45-55,89-103,136-150,214-222
2we6  A:13-25,49-58,88-105,138-149,218-226
2we6  B:13-25,49-58,91-105,138-149,218-226
3kw5  A:9-21,45-55,89-103,136-151,214-222
3ihr  A:14-26,48-58,87-100,133-144,218-226
3g5t  A:158-171,230-235,235-246,263-277,284-299
3a7s  A:14-26,48-57,84-100,133-145,217-226
2wdt  C:13-25,49-58,91-105,138-149,218-226
2wdt  A:13-25,49-58,88-105,138-150,218-226