1. b.93.1 Epsilon subunit of F1F0-ATP synthase N-terminal domain
Epsilon subunit of F1F0-ATP synthase N-terminal domain pseudobarrel: sandwich of two sheets packed at a positive interstrand angle and interconnected with many short turns
1h8e d1h8eh_ H:16-23,42-49,53-60,78-86,88-96
2v7q d2v7qh2 H:16-23,42-48,53-60,79-85,88-96
1aqt d1aqta2 A:3-11,29-35,40-47,65-73,74-82
2. c.23.16 Class I glutamine amidotransferase-like conserved positions of the oxyanion hole and catalytic nucleophile; different constituent families contain different additional structures !
Flavodoxin-like 3 layers, a/b/a; parallel beta-sheet of 5 strand, order 21345
2a9v d2a9vb1 B:74-80,103-110,139-144,152-157,160-165
1qdl d1qdlb_ B:79-84,107-115,146-151,160-165,168-173
1a9x d1a9xf2 F:5764-5769,5793-5801,5824-5829,5838-5843,5846-5851
1m6v d1m6vf2 F:264-269,293-301,324-329,338-343,346-351
1o1y d1o1ya_ A:83-88,112-119,148-152,160-165,166-171
1q7r d1q7ra_ A:72-78,114-122,145-149,156-161,162-167
1m6v d1m6vd2 D:264-269,293-301,324-329,338-343,346-351
1c30 d1c30f2 F:264-269,293-301,324-329,338-343,346-351
1bxr d1bxrf2 F:264-269,293-301,324-329,338-343,346-351
1cs0 d1cs0d2 D:264-269,293-301,324-329,338-343,346-351
1bxr d1bxrd2 D:264-269,293-301,324-329,338-343,346-351
1c30 d1c30d2 D:264-269,293-301,324-329,338-343,346-351
1jdb d1jdbi2 I:264-269,293-301,324-329,338-343,346-351
1ce8 d1ce8d2 D:264-269,293-301,324-329,338-343,346-351
1c3o d1c3of2 F:264-269,293-301,324-329,338-343,346-351
1i7q d1i7qb_ B:80-85,107-116,146-150,157-163,164-170
1ce8 d1ce8f2 F:264-269,293-301,324-329,338-343,346-351
1cs0 d1cs0f2 F:264-269,293-301,324-329,338-343,346-351
1bxr d1bxrh2 H:264-269,293-301,324-329,338-343,346-351
1i7s d1i7sd_ D:80-85,109-116,146-150,157-163,164-170
1i1q d1i1qb_ B:78-83,107-114,143-147,154-160,161-167
1i7q d1i7qd_ D:80-85,108-116,146-150,157-163,164-170
1m6v d1m6vb2 B:264-269,293-301,324-329,338-343,346-351
1i7s d1i7sb_ B:80-85,110-116,146-150,157-163,164-170
1ce8 d1ce8b2 B:264-269,293-301,324-329,338-343,346-351
1s1m d1s1ma1 A:374-379,443-449,486-490,499-503,508-513
1bxr d1bxrb2 B:264-269,293-301,324-329,338-343,346-351
1gpm d1gpma2 A:80-86,110-116,154-158,166-172,173-179
1vcm d1vcma1 A:386-391,444-451,488-492,506-510,515-520
1vco d1vcoa1 A:386-391,444-451,488-492,506-510,515-520
3. i.3.1 ATP synthase
ATP synthase
1qo1 d1qo1j_ J:3-11,29-35,40-47,65-73,74-82
4. b.68.6 Calcium-dependent phosphotriesterase
6-bladed beta-propeller consists of six 4-stranded beta-sheet motifs; meander
2dso d2dsoe1 E:30-34,203-211,244-252,255-261,263-271
2dso d2dsoa1 A:30-34,203-211,244-252,255-261,263-271
2dg1 d2dg1a1 A:30-34,204-211,244-252,255-261,263-271
2dg0 d2dg0g1 G:30-34,204-211,244-252,255-261,263-271
2dg1 d2dg1c1 C:30-34,204-211,244-252,255-261,263-271
2dg1 d2dg1e1 E:30-34,204-211,244-252,255-261,263-271
2dg0 d2dg0e1 E:30-34,204-211,244-252,255-261,263-271
2dg0 d2dg0f1 F:30-34,204-211,244-252,255-261,263-271
2dg0 d2dg0d1 D:30-34,204-211,244-252,255-261,263-271
2dg0 d2dg0j1 J:30-34,204-211,244-252,255-261,263-271
2dso d2dsoc1 C:30-34,203-211,244-252,255-261,263-271
2dg0 d2dg0k1 K:30-34,204-211,244-252,255-261,263-271
2dso d2dsod1 D:30-34,203-211,244-252,255-261,263-271
2dso d2dsob1 B:30-34,203-211,244-252,255-261,263-271
2dg0 d2dg0i1 I:30-34,204-211,244-252,255-261,263-271
2dg0 d2dg0a1 A:30-34,204-211,244-252,255-261,263-271
2dg0 d2dg0c1 C:30-34,204-211,244-252,255-261,263-271
2dg0 d2dg0h1 H:30-34,204-211,244-252,255-261,263-271
2dg0 d2dg0b1 B:30-34,204-211,244-252,255-261,263-271
2dg0 d2dg0l1 L:30-34,204-211,244-252,255-261,263-271
2dg1 d2dg1b1 B:30-34,204-211,244-252,255-261,263-271
2dg1 d2dg1d1 D:30-34,204-211,244-252,255-261,263-271
2dso d2dsof1 F:30-34,203-211,244-252,255-261,263-271
2dg1 d2dg1f1 F:30-34,204-211,244-252,255-261,263-271
1e1a d1e1aa_ A:3-7,197-207,237-245,248-254,260-265
2gvv d2gvva1 A:3-7,197-207,237-245,248-254,260-265
5. b.81.1 Trimeric LpxA-like enzymes superhelical turns are made of three short strands; duplication: the sequence hexapeptide repeats correspond to individual strands !
Single-stranded left-handed beta-helix superhelix turns are made of parallel beta-strands and (short) turns
1yp3 d1yp3d1 D:398-405,410-415,421-426,429-434,435-442
1yp4 d1yp4a1 A:398-405,410-415,421-426,429-434,435-442
1yp3 d1yp3c1 C:398-405,410-415,421-426,429-434,435-442
1yp2 d1yp2c1 C:398-405,410-415,421-426,429-434,435-442
1yp2 d1yp2d1 D:398-405,410-415,421-426,429-434,435-442
1yp2 d1yp2b1 B:398-405,410-415,421-426,429-434,435-442
1yp3 d1yp3b1 B:398-405,410-415,421-426,429-434,435-442
1yp3 d1yp3a1 A:398-405,410-415,421-425,429-434,435-442
1yp4 d1yp4d1 D:398-405,410-415,421-426,429-434,436-442
1yp4 d1yp4c1 C:398-405,410-415,421-426,429-434,436-442
1yp4 d1yp4b1 B:398-405,410-415,421-426,429-434,436-442
1yp2 d1yp2a1 A:398-405,410-415,421-426,429-434,436-442
6. b.126.1 Adsorption protein p2
Adsorption protein p2 multisheet protein containing partial beta-propeller and beta-sandwich regions
1n7v d1n7va_ A:7-12,429-433,473-481,489-496,500-505
1n7u d1n7ua_ A:7-12,429-433,473-481,489-496,500-505
7. b.69.12 Sema domain irregular 7-bladed beta-propeller with a large insertion in the fifth blade !
7-bladed beta-propeller consists of seven 4-stranded beta-sheet motifs; meander
1olz d1olzb2 B:8-12,300-308,412-423,426-434,435-445
1olz d1olza2 A:8-12,300-308,412-423,426-434,435-445
1q47 d1q47b_ B:31-35,337-344,443-454,457-466,471-482
8. b.69.14 Nucleoporin domain
7-bladed beta-propeller consists of seven 4-stranded beta-sheet motifs; meander
1xip d1xipa_ A:1-5,181-190,224-232,244-254,255-262
9. b.68.3 Thermostable phytase (3-phytase)
6-bladed beta-propeller consists of six 4-stranded beta-sheet motifs; meander
1poo d1pooa_ A:34-39,229-235,270-280,281-290,293-302
1cvm d1cvma_ A:34-39,229-235,270-280,281-290,293-302
1h6l d1h6la_ A:34-39,229-235,270-280,281-290,293-302
10. b.97.1 Cytolysin/lectin some topological similarity to osmotin !
Cytolysin/lectin sandwich, 10 strands in 2 sheets;
1o72 d1o72a_ A:29-39,95-106,146-152,154-162,165-175
1iaz d1iaza_ A:31-41,97-108,149-155,157-165,168-178
1o72 d1o72b_ B:29-39,95-106,146-152,154-162,165-175
1o71 d1o71a_ A:29-39,95-106,146-152,154-162,165-175
1gwy d1gwyb_ B:29-39,95-106,146-152,154-162,165-175
1tzq d1tzqa_ A:31-41,97-108,149-155,157-165,168-178
1gwy d1gwya_ A:29-39,95-106,146-152,154-162,165-175
1o71 d1o71b_ B:29-39,95-106,146-152,154-162,165-175
1iaz d1iazb_ B:31-40,97-108,149-154,157-165,168-179
1x99 d1x99b_ B:3-14,19-29,114-121,123-133,136-145
1y2v d1y2vb_ B:2-12,61-73,112-119,121-130,134-143
1y2x d1y2xd_ D:2-12,61-73,112-119,121-130,134-143
1y2w d1y2wb_ B:2-12,61-73,112-119,121-130,134-143
1y2t d1y2tb_ B:2-12,61-73,112-119,121-130,134-143
1y2u d1y2ub_ B:2-12,61-73,112-119,121-130,134-143
1y2v d1y2va_ A:2-12,61-73,112-119,121-130,134-143
1x99 d1x99a_ A:3-14,64-75,114-121,123-133,136-145
1y2x d1y2xa_ A:2-12,61-73,112-119,121-130,134-143
1x99 d1x99b_ B:3-14,64-75,114-121,123-133,136-145
1y2x d1y2xb_ B:2-12,61-73,112-119,121-130,134-143
1y2x d1y2xc_ C:2-12,61-73,112-119,121-130,134-143
1y2u d1y2ua_ A:2-12,61-73,112-119,121-130,134-143
1y2w d1y2wa_ A:2-12,61-73,112-119,121-130,134-143
1y2t d1y2ta_ A:2-12,61-73,112-119,121-130,134-143
11. b.1.5 Transglutaminase, two C-terminal domains
Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
2q3z d2q3za2 A:399-405,419-423,501-516,559-571,572-584
12. b.1.18 E set domains "Early" Ig-like fold families possibly related to the immunoglobulin and/or fibronectin type III superfamilies !
Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
1txk d1txka1 A:284-291,296-306,445-452,483-495,501-510
List of motif hits that are not present in SCOP but are found in PDB for pattern ID: 12 (enumeration index: query54.55) of S5
2iar A:3-7,197-206,237-244,248-254,260-265
2rq6 A:2-10,29-34,39-46,63-71,72-80
3qdt A:1-11,61-72,111-118,120-129,133-142
3qdt B:1-11,61-72,111-118,120-129,133-142
3f7f A:2-11,295-305,347-358,359-369,375-382
3f7f B:2-11,295-305,347-358,359-369,375-382
2iau A:3-7,197-207,237-245,248-254,259-265
2iat A:3-7,197-207,237-245,247-254,259-265
2iao A:3-7,197-207,237-244,248-254,259-265
3li4 A:3-7,197-207,237-245,248-254,260-265
2ad5 A:374-379,443-449,486-490,499-503,508-513
3oe7 H:11-17,36-43,47-54,71-79,81-89
3qdx A:1-11,61-72,111-118,120-129,133-142
3qdx B:1-11,61-72,111-118,120-129,133-142
2gvx A:3-7,197-207,237-245,248-254,259-265
2v4u A:394-399,451-458,496-501,510-515,519-524
3fks H:11-17,36-43,47-54,72-79,81-88
3ugh B:29-33,235-245,282-293,294-305,317-330
3ugh A:29-33,234-245,282-293,294-305,317-330
2vkt A:394-399,451-458,496-501,510-515,519-524
3amr A:6-11,201-207,242-252,253-262,265-274
3hlh C:3-7,197-207,237-245,248-254,259-265
3hlh D:3-7,197-207,237-245,248-254,259-265
3hlh B:3-7,197-207,237-245,248-254,259-265
3r74 A:521-526,549-557,583-593,594-603,604-609
3r74 B:521-526,549-557,583-593,594-603,604-609
2h2w A:136-142,167-173,206-211,219-224,227-232
3qdy A:1-11,61-72,111-118,120-129,133-142
3qdy B:1-11,61-72,111-118,120-129,133-142
2xc8 B:3-8,10-21,54-67,92-105,107-117
2xc8 A:1-9,10-21,54-67,92-105,110-118
2xc8 B:3-8,36-47,54-67,92-105,107-117
2xok H:13-17,36-43,47-54,71-79,81-88
2l2b A:29-37,95-105,143-148,155-162,165-175
2iax A:3-7,197-207,237-244,248-254,259-265
3byc A:3-7,197-207,237-245,248-254,259-265
2wss H:16-23,43-49,54-60,78-85,88-96
2wss Q:16-23,43-49,54-60,78-85,88-96
3oeh H:11-17,36-43,47-54,71-79,81-88
3r75 B:521-526,549-557,584-593,594-603,604-609
3r75 A:521-526,549-557,584-593,594-603,604-609
2w7t A:414-419,467-477,516-520,533-537,542-547
2hld H:11-17,36-43,47-54,71-79,81-89
2ofe A:1-11,16-25,110-117,119-129,132-141
2ofe A:1-11,60-71,110-117,119-129,132-141
2ofe B:1-11,60-71,110-117,119-129,132-141
2ofe B:1-11,17-25,110-117,119-129,132-141
3p2t A:92-96,113-123,128-135,167-176,181-185
2iap A:3-7,197-207,237-244,248-254,260-265
3ugf B:29-33,234-245,282-293,294-305,317-330
3lim C:31-41,97-108,149-155,157-165,168-178
3lim D:31-41,97-108,149-155,157-165,168-178
3lim B:31-41,97-108,149-155,157-165,168-178
3lim A:31-41,97-108,149-155,157-165,168-178
3lim F:31-41,97-108,149-155,157-165,168-178
3lim E:31-41,97-108,149-155,157-165,168-178
1xi0 B:4-14,64-75,114-121,123-133,136-145
1xi0 A:3-14,19-29,114-121,123-132,136-145
1xi0 A:3-14,64-75,114-121,123-132,136-145
3ol2 A:29-33,321-329,433-444,446-455,456-466
3r76 B:521-526,549-557,584-593,594-603,604-609
3r76 A:521-526,549-557,584-593,594-603,604-609
2ias A:3-7,197-207,237-245,248-254,259-265
3hxr A:2-11,295-302,348-358,359-371,372-383
3nok B:26-35,143-151,179-186,189-197,198-207
3nok A:26-38,143-151,179-186,189-197,198-207
2rq7 A:2-10,29-34,38-46,63-71,72-80
3a57 A:12-23,76-89,122-131,132-143,144-154
3a57 A:12-23,32-41,122-131,132-143,144-154
3hli D:3-7,197-207,237-245,248-254,260-265
3hli C:3-7,197-207,237-245,248-254,259-265
3hli B:3-7,197-207,237-245,248-254,259-265
2j04 D:253-259,282-288,575-582,598-608,613-624
2j04 B:253-259,282-288,575-582,598-608,613-618
2vpi A:99-104,126-134,164-168,175-181,182-188
2vpi B:99-104,126-134,164-168,175-181,182-188
3ams A:6-11,201-207,242-252,253-262,265-274
2l38 A:32-38,95-104,144-150,155-163,167-175
3qdu B:1-11,61-72,111-118,120-129,133-142
3qdu C:1-11,61-72,111-118,120-129,133-142
3qdu D:1-11,61-72,111-118,120-129,133-142
3qdu A:1-11,61-72,111-118,120-129,133-142
3oky B:27-31,324-331,435-443,445-454,461-471
3qds A:1-11,61-72,111-118,120-129,133-142
3qds B:1-11,61-72,111-118,120-129,133-142
2vxo A:99-104,128-134,164-168,175-181,182-188
2vxo B:99-104,126-134,164-168,175-181,182-188
3fij C:108-115,152-159,188-193,201-206,209-216
3fij A:108-115,153-159,188-193,201-206,209-216
3fij G:108-115,153-159,188-193,201-206,209-216
3fij D:108-115,153-159,188-193,201-206,209-216
3fij F:108-115,153-159,188-193,201-206,209-216
3fij E:108-115,153-159,188-193,201-206,209-216
3tqi B:80-86,107-116,154-158,166-172,173-179
3tqi A:80-86,107-116,154-158,166-172,173-179
3tqi C:80-86,107-116,154-158,166-172,173-179
2b5l B:393-404,609-619,645-653,655-663,664-672
3qdv A:1-11,61-72,111-118,120-129,133-142
3qdv B:1-11,61-72,111-118,120-129,133-142
3qdw A:1-11,61-72,111-118,120-129,133-142
3qdw B:1-11,61-72,111-118,120-129,133-142
3rrm C:0-8,181-190,224-232,244-254,255-262
2ofd B:1-11,60-71,110-117,119-129,132-141
2ofd B:1-11,17-25,110-117,119-129,132-141
2ofd A:1-11,60-71,110-117,119-129,132-141
2iav A:3-7,197-207,237-244,248-254,259-265
2iaw A:3-7,197-207,237-245,248-254,259-265
2ywj A:70-75,110-118,141-145,152-157,158-163
2yd1 A:43-49,49-61,169-176,204-214,215-228
2iaq A:3-7,197-206,237-244,248-254,260-265
2wpd H:10-17,36-43,47-54,72-79,81-88
3afc A:27-31,324-331,433-443,445-453,462-471
3o4p A:3-7,197-207,237-245,248-254,260-265
3i1c A:3-7,197-207,237-245,248-254,260-265
2ofc A:1-11,60-71,110-117,119-129,132-141
2ofc B:1-11,60-71,110-117,119-129,132-141
2ofc B:1-11,17-25,110-117,119-129,132-141