2. d.240.1 Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain beta-alpha-beta(2)-alpha-beta; antiparallel beta-sheet: order 1423; "reversed" ferredoxin-like topology 1unn d1unnc_ C:255-267,281-293,295-306,308-325,328-338 1unn d1unnd_ D:255-267,281-293,295-306,308-325,328-338 2dpj d2dpja1 A:313-327,340-348,357-364,379-394,404-412 1t94 d1t94a1 A:427-443,454-463,465-472,483-500,505-515 2fll d2flla1 A:313-336,340-348,357-364,379-394,404-412 2alz d2alza1 A:313-336,340-348,357-364,379-394,404-412 2flp d2flpa1 A:317-336,340-348,357-364,379-394,404-412 1zet d1zeta1 A:316-326,338-349,357-364,375-395,403-414 2fln d2flna1 A:313-336,340-348,357-364,379-394,404-414 2dpi d2dpia1 A:317-336,340-348,357-364,379-394,404-412 1t3n d1t3nb1 B:733-746,760-766,778-784,796-811,826-832 3bq2 d3bq2a1 A:258-278,282-291,293-302,307-327,330-340 2au0 d2au0a1 A:257-277,282-291,294-302,307-327,329-339 3bq0 d3bq0a1 A:258-278,282-291,293-302,307-327,330-340 2v9w d2v9wb1 B:257-277,282-291,293-302,307-327,329-339 3bq1 d3bq1a1 A:258-278,282-291,293-302,307-327,330-340 1k1q d1k1qb1 B:258-278,282-291,293-302,307-327,330-340 2ibk d2ibka1 A:257-277,282-291,293-302,307-327,329-339 2va2 d2va2b1 B:257-277,282-291,293-302,307-327,329-339 2asj d2asjb1 B:1257-1277,1282-1291,1293-1302,1307-1327,1329-1339 1t94 d1t94b1 B:427-450,454-463,465-473,480-500,505-516 1s97 d1s97c1 C:257-277,282-291,293-302,307-327,329-339 2va3 d2va3a1 A:257-277,282-291,293-302,307-327,329-339 1s0m d1s0ma1 A:257-277,282-291,293-302,307-327,329-339 1s0m d1s0mb1 B:257-277,282-291,293-302,307-327,329-339 1n56 d1n56a1 A:257-277,282-291,293-302,307-327,329-339 1s0o d1s0oa1 A:257-277,282-291,293-302,307-327,329-339 2r8h d2r8ha1 A:257-277,282-291,293-302,307-327,329-339 1s97 d1s97b1 B:257-277,282-291,293-302,307-327,329-339 2agq d2agqa1 A:257-277,282-291,293-302,307-327,329-339 2rdj d2rdjb1 B:257-277,282-291,293-302,307-327,329-339 2r8i d2r8ia1 A:257-277,282-291,293-302,307-327,329-339 2jej d2jeja1 A:257-277,282-291,293-302,307-327,329-339 2c2e d2c2ea1 A:257-277,282-291,293-302,307-327,329-339 2uvu d2uvua1 A:257-277,282-291,293-302,307-327,329-339 1s10 d1s10a1 A:257-277,282-291,293-302,307-327,329-339 2asj d2asja1 A:257-277,282-291,293-302,307-327,329-339 2jei d2jeia1 A:257-277,282-291,293-302,307-327,329-339 2j6u d2j6ua1 A:260-280,285-294,296-305,310-330,332-342 1k1s d1k1sa1 A:258-278,282-291,293-302,307-327,330-340 2r8g d2r8ga1 A:257-277,282-291,293-302,307-327,329-339 2uvv d2uvva1 A:257-277,282-291,293-302,307-327,329-339 2va2 d2va2a1 A:257-277,282-291,293-302,307-327,329-339 1rys d1rysa1 A:257-277,282-291,293-302,307-327,329-339 2c22 d2c22a1 A:257-277,282-291,293-302,307-327,329-339 2asd d2asda1 A:257-277,282-291,293-302,307-327,329-339 2bq3 d2bq3a1 A:257-277,282-291,293-302,307-327,329-339 1s0o d1s0ob1 B:257-277,282-291,293-302,307-327,329-339 2j6s d2j6sa1 A:257-277,282-291,293-302,307-327,329-339 2jeg d2jega1 A:257-277,282-291,293-302,307-327,329-339 2jef d2jefa1 A:257-277,282-291,293-302,307-327,329-339 2c28 d2c28a1 A:257-277,282-291,293-302,307-327,329-339 2j6t d2j6ta1 A:257-277,282-291,293-302,307-327,329-339 2c2r d2c2ra1 A:257-277,282-291,293-302,307-327,329-339 2bqu d2bqua1 A:257-277,282-291,293-302,307-327,329-339 2bqr d2bqra1 A:257-277,282-291,293-302,307-327,329-339 2c2d d2c2da1 A:257-277,282-291,293-302,307-327,329-339 2uvr d2uvra1 A:257-277,282-291,293-302,307-327,329-339 2r8k d2r8kb1 B:408-435,441-450,453-461,468-489,494-505 2br0 d2br0a1 A:257-277,282-291,293-302,307-327,329-339 1k1q d1k1qa1 A:258-278,282-291,293-302,307-327,330-340 1t3n d1t3nb1 B:745-756,760-766,778-784,796-811,826-832 1jih d1jiha1 A:408-435,441-450,452-461,468-489,494-505 1s97 d1s97d1 D:257-277,282-291,293-302,307-327,329-341 2v9w d2v9wa1 A:257-277,282-291,293-302,307-327,329-339 1s97 d1s97a1 A:257-277,282-291,293-302,307-327,329-341 1s9f d1s9fa1 A:257-277,282-291,293-302,307-327,329-341 1s9f d1s9fb1 B:257-277,282-291,293-302,307-327,329-341 2au0 d2au0b1 B:1257-1277,1282-1291,1293-1302,1307-1327,1328-1341 1zet d1zeta1 A:325-336,338-349,357-364,375-395,403-414 1t3n d1t3na1 A:316-336,340-348,356-364,375-395,404-412 1n48 d1n48a1 A:257-277,282-291,293-302,307-327,329-341 1s9f d1s9fd1 D:257-277,282-291,293-302,307-327,329-341 2ago d2agoa1 A:257-277,282-291,293-302,307-327,329-341 1rys d1rysb1 B:257-277,282-291,293-302,307-327,329-341 2uvw d2uvwa1 A:257-277,282-291,293-302,307-327,329-341 1s0n d1s0na1 A:257-277,282-291,293-302,307-327,329-341 2atl d2atlb1 B:1257-1277,1282-1291,1293-1302,1307-1327,1329-1341 2rdj d2rdja1 A:257-277,282-291,293-302,307-327,329-341 1s9f d1s9fc1 C:257-277,282-291,293-302,307-327,329-341 2atl d2atla1 A:257-277,282-291,293-302,307-327,329-341 2agp d2agpa1 A:257-277,282-291,293-302,307-327,329-341 1jx4 d1jx4a1 A:257-277,282-291,293-302,307-327,329-341 2r8k d2r8ka1 A:408-435,441-450,452-461,468-489,495-505 2rdi d2rdia1 A:257-277,282-291,293-302,307-327,329-341 1jxl d1jxla1 A:257-277,282-291,293-302,307-327,329-341 2asd d2asdb1 B:1257-1277,1282-1291,1293-1302,1307-1327,1329-1341 2imw d2imwp1 P:257-277,282-291,293-302,307-327,329-341 2agp d2agpb1 B:257-277,282-291,293-302,307-327,329-341 1jih d1jihb1 B:408-435,441-450,452-461,465-489,495-505 1ryr d1ryra1 A:257-277,282-291,293-302,307-327,329-341 1n56 d1n56b1 B:257-277,282-291,293-302,307-327,329-341 2asl d2asla1 A:257-277,282-291,293-302,307-327,329-341 2r8j d2r8jb1 B:408-435,441-450,452-461,469-489,495-509 2asl d2aslb1 B:1257-1277,1282-1291,1293-1302,1307-1327,1329-1341 2r8j d2r8ja1 A:408-435,441-450,452-461,468-489,495-509 4. c.90.1 Tetrapyrrole methylase Tetrapyrrole methylase consists of two non-similar domains ! Domain 1 has parallel sheet of 5 strands, order 32415 ! Domain 2 has mixed sheet of 5 strands, order 12534; strands 4 & 5 are antiparallel to the rest 1wyz d1wyzd1 D:177-189,193-200,206-212,212-220,227-234 1vce d1vcea1 A:177-193,202-208,214-220,220-227,233-241 1wng d1wnga1 A:177-193,202-208,214-220,220-227,233-241 2dek d2deka1 A:177-193,202-208,214-220,220-227,233-241 2dek d2dekb1 B:177-193,202-208,214-220,220-227,233-241 1vce d1vceb1 B:177-193,202-208,214-220,220-227,233-241 1wyz d1wyza1 A:177-189,193-200,206-212,212-220,228-234 1wng d1wngb1 B:177-193,202-208,214-220,220-227,233-241 1wyz d1wyzb1 B:175-189,193-200,206-213,212-220,225-234 1vhv d1vhvb_ B:168-181,186-193,199-206,205-213,218-226 1vhv d1vhva_ A:168-181,186-193,199-206,205-213,218-226 1wyz d1wyzc1 C:174-189,193-200,206-213,212-220,228-234 1s4d d1s4da_ A:188-200,205-212,218-225,224-236,240-246 1s4d d1s4dh_ H:188-200,205-212,218-225,224-236,240-246 1s4d d1s4dd_ D:188-200,205-212,218-225,224-236,240-246 1s4d d1s4dj_ J:188-200,205-212,218-225,224-236,240-246 1cbf d1cbfa_ A:188-200,205-212,218-225,224-236,240-246 2cbf d2cbfa_ A:188-200,205-212,218-225,224-236,240-246 1s4d d1s4df_ F:188-200,205-212,218-225,224-236,240-246 1s4d d1s4db_ B:188-200,205-212,218-225,224-236,240-246 1s4d d1s4dl_ L:188-200,205-212,218-225,227-236,240-246 1pjs d1pjsa2 A:383-398,403-410,416-423,425-434,436-442 1s4d d1s4dg_ G:188-200,203-212,218-226,225-236,240-246 1s4d d1s4di_ I:188-200,203-212,218-226,225-236,240-246 1s4d d1s4de_ E:188-200,203-212,218-226,225-236,240-246 1s4d d1s4dk_ K:188-200,203-212,218-226,225-236,240-246 1s4d d1s4dm_ M:188-200,203-212,218-226,225-236,240-246 1v9a d1v9ab1 B:164-176,182-188,194-200,200-207,214-220 1va0 d1va0b1 B:164-176,182-188,194-200,200-207,214-220 1va0 d1va0a1 A:164-176,182-188,194-200,200-207,214-220 1v9a d1v9aa1 A:164-176,182-188,194-200,200-207,214-220 1pjs d1pjsb2 B:386-398,403-410,416-423,425-434,436-442 5. d.280.1 Sulfolobus fructose-1,6-bisphosphatase-like Sulfolobus fructose-1,6-bisphosphatase-like 4 layers: a/b/b/a; antiparallel beta sheets; similarities to ferredoxin-like fold (scop_cf 54861) in the N-terminal part (1-120) and to the Bacterial S-adenosylmethionine decarboxylase subunit (scop_fa 997656) in the C-terminal part (121-340) 1umg d1umga_ A:135-149,165-174,175-183,186-197,199-209 6. d.142.1 Glutathione synthetase ATP-binding domain-like ATP-grasp Consists of two subdomains with different alpha+beta folds ! shares functional and structural similarities with the PIPK and protein kinase superfamilies 1i7l d1i7lb2 B:255-262,265-272,279-285,285-300,301-308 1ehi d1ehib2 B:557-565,576-582,589-594,595-611,611-618 1i7n d1i7nb2 B:255-262,265-272,279-285,285-300,301-308 1i7n d1i7na2 A:255-262,265-272,279-285,285-300,301-308 1i7l d1i7la2 A:255-262,265-272,279-285,285-300,301-308 1kjq d1kjqa3 A:137-149,150-157,164-170,170-185,191-197 1gso d1gsoa3 A:127-139,140-146,154-160,160-173,183-189 1gsh d1gsha2 A:143-155,155-161,170-175,177-189,194-200 1kjj d1kjja3 A:137-149,150-157,164-170,170-184,191-197 2glt d2glta2 A:143-155,155-161,170-175,177-189,194-200 1vkz d1vkzb3 B:117-129,130-137,144-150,150-164,173-178 1ehi d1ehia2 A:157-165,176-182,189-194,195-211,212-218 1ez1 d1ez1a3 A:137-149,150-157,164-170,170-185,191-197 1kj8 d1kj8b3 B:137-149,151-157,164-169,170-182,191-197 1vkz d1vkza3 A:117-129,130-137,144-150,150-164,173-178 1kj9 d1kj9a3 A:137-149,150-157,164-170,170-184,191-197 1kjq d1kjqb3 B:137-149,150-157,164-170,170-184,191-197 1kj8 d1kj8a3 A:137-149,150-157,164-170,170-184,191-197 1glv d1glva2 A:143-155,155-161,170-175,177-189,194-200 1kji d1kjia3 A:137-149,150-157,164-170,170-185,191-197 1eyz d1eyza3 A:137-149,150-157,164-170,170-185,191-197 1kjj d1kjjb3 B:137-149,151-157,164-169,170-183,191-197 1kji d1kjib3 B:137-149,151-157,164-169,170-187,191-197 1gsa d1gsaa2 A:143-155,155-161,169-175,179-189,194-200 1a9x d1a9xa5 A:151-163,164-171,178-184,184-200,203-209 1bxr d1bxrc5 C:151-163,164-171,178-184,184-200,203-209 1m6v d1m6va5 A:151-163,164-171,178-184,184-200,203-209 1m6v d1m6vg5 G:151-163,164-171,178-184,184-200,203-209 1bxr d1bxra5 A:151-163,164-171,178-184,184-200,203-209 1kee d1keee6 E:697-709,710-716,724-730,730-741,750-755 1kee d1keeg5 G:151-163,164-171,178-184,184-200,203-209 1kee d1keeg6 G:697-709,710-716,724-730,730-741,750-755 1a9x d1a9xg5 G:6151-6163,6164-6171,6178-6184,6184-6200,6203-6209 1c30 d1c30a5 A:151-163,164-171,178-184,184-200,203-209 1ce8 d1ce8g5 G:151-163,164-171,178-184,184-200,203-209 1jdb d1jdbe5 E:150-162,163-170,177-183,183-199,202-208 1c30 d1c30g6 G:697-709,710-716,724-730,730-741,750-755 1t36 d1t36a5 A:151-163,164-171,178-184,184-200,203-209 1c3o d1c3oe6 E:697-709,710-716,724-730,730-741,750-755 1c3o d1c3oc6 C:697-709,710-716,724-730,730-741,750-755 1kee d1keec6 C:697-709,710-716,724-730,730-741,750-755 1c3o d1c3og6 G:697-709,710-716,724-730,730-741,750-755 1cs0 d1cs0a5 A:151-163,164-171,178-184,184-200,203-209 1ce8 d1ce8a5 A:151-163,164-171,178-184,184-200,203-209 1c3o d1c3oa5 A:151-163,164-171,178-184,184-200,203-209 1c30 d1c30c6 C:697-709,710-716,724-730,730-741,750-755 1t36 d1t36c5 C:151-163,164-171,178-184,184-200,203-209 1a9x d1a9xe5 E:4151-4163,4164-4171,4178-4184,4184-4200,4203-4209 1cs0 d1cs0g6 G:697-709,710-716,724-730,730-741,750-755 1c3o d1c3og5 G:151-163,164-171,178-184,184-200,203-209 1a9x d1a9xc5 C:2151-2163,2164-2171,2178-2184,2184-2200,2203-2209 1b6s d1b6sb3 B:102-114,116-122,130-135,135-143,149-155 1m6v d1m6vc5 C:151-163,164-171,178-184,184-200,203-209 1a9x d1a9xa6 A:697-709,710-716,724-730,730-741,750-755 1c30 d1c30g5 G:151-163,164-171,178-184,184-200,203-209 1kee d1keec5 C:151-163,164-171,178-184,184-200,203-209 1kee d1keea5 A:151-163,164-171,178-184,184-200,203-209 1cs0 d1cs0g5 G:151-163,164-171,178-184,184-200,203-209 1t36 d1t36g5 G:151-163,164-171,178-184,184-200,203-209 1uc9 d1uc9a2 A:111-123,124-129,139-144,144-154,165-171 1jdb d1jdbh5 H:150-162,163-170,177-183,183-199,202-208 1c3o d1c3oa6 A:697-709,710-716,724-730,730-741,750-755 1ce8 d1ce8c5 C:151-163,165-171,178-183,184-200,203-209 1cs0 d1cs0c5 C:151-163,164-171,178-184,184-200,203-209 1t36 d1t36e6 E:697-709,710-716,724-730,730-741,750-755 1bxr d1bxrg5 G:151-163,164-171,178-184,184-200,203-209 1cs0 d1cs0c6 C:697-709,710-716,724-730,730-741,750-755 3eth d3ethb3 B:102-114,116-122,130-135,135-143,149-155 1c3o d1c3oe5 E:151-163,164-171,178-184,184-200,203-209 3etj d3etja3 A:102-114,116-122,130-135,135-143,149-155 1kee d1keee5 E:151-163,164-171,178-184,184-200,203-209 1kee d1keea6 A:697-709,710-716,724-730,730-741,750-755 1jdb d1jdbk5 K:150-162,163-170,177-183,183-199,202-208 1jdb d1jdbb5 B:150-162,164-170,177-182,183-199,202-208 1m6v d1m6ve5 E:151-163,164-171,178-184,184-200,203-209 1cs0 d1cs0e6 E:697-709,710-716,724-730,730-741,750-755 1jdb d1jdbk6 K:696-708,709-715,723-729,729-740,748-754 1c30 d1c30c5 C:151-163,165-171,178-183,184-200,203-209 1a9x d1a9xg6 G:6697-6709,6710-6716,6724-6730,6730-6741,6750-6755 1uc9 d1uc9b2 B:111-123,124-129,139-144,144-152,165-171 1c30 d1c30a6 A:697-709,710-716,724-730,730-741,750-755 1cs0 d1cs0a6 A:697-709,710-716,724-730,730-741,750-755 1b6s d1b6sa3 A:102-114,116-122,130-135,135-143,149-155 1ce8 d1ce8c6 C:697-709,710-716,724-730,730-741,750-755 1ce8 d1ce8g6 G:697-709,710-716,724-730,730-741,750-755 1w96 d1w96c3 C:234-246,247-255,261-267,267-283,285-292 1cs0 d1cs0e5 E:151-163,165-171,178-183,184-200,203-209 1m6v d1m6ve6 E:697-709,710-716,724-730,730-741,750-755 1a9x d1a9xc6 C:2697-2709,2710-2716,2724-2730,2730-2741,2750-2755 1c3o d1c3oc5 C:151-163,164-171,178-184,184-200,203-209 1c30 d1c30e6 E:697-709,710-716,724-730,730-741,750-755 1t36 d1t36a6 A:697-709,710-716,724-730,730-741,750-755 1t36 d1t36g6 G:697-709,710-716,724-730,730-741,750-755 1t36 d1t36e5 E:151-163,165-171,178-183,184-200,203-209 1b6s d1b6sd3 D:102-114,116-122,130-135,135-143,149-155 1w96 d1w96b3 B:234-246,247-255,261-267,267-283,285-292 1b6s d1b6sc3 C:102-114,116-122,130-135,135-143,149-155 1w96 d1w96a3 A:234-246,247-255,261-267,267-283,285-292 1ce8 d1ce8e6 E:697-709,710-716,724-730,730-741,750-755 1m6v d1m6vg6 G:697-709,710-716,724-730,730-741,750-755 1a9x d1a9xe6 E:4697-4709,4710-4716,4724-4730,4730-4741,4750-4755 1c30 d1c30e5 E:151-163,165-171,179-183,184-200,203-209 1t36 d1t36c6 C:697-709,710-716,725-730,730-741,750-755 1ce8 d1ce8e5 E:151-163,164-171,179-184,184-200,203-209 1b6r d1b6ra3 A:102-114,116-122,130-135,135-143,149-155 2scu d2scub2 B:27-39,42-48,59-64,65-77,95-101 1w93 d1w93a3 A:234-246,247-254,261-267,267-283,286-292 1bxr d1bxre5 E:151-163,165-171,179-183,184-200,203-209 1jdb d1jdbe6 E:696-708,709-714,724-729,729-740,749-754 1scu d1scub2 B:27-39,42-48,59-64,65-77,95-101 2nu9 d2nu9e2 E:27-39,42-48,59-64,65-77,95-101 2nu9 d2nu9g2 G:27-39,42-48,59-64,65-77,95-101 2nu9 d2nu9i2 I:27-39,42-48,59-64,65-77,95-101 2nu9 d2nu9b2 B:27-39,42-48,59-64,65-77,95-101 1m6v d1m6va6 A:697-709,710-716,725-730,730-741,750-755 1m6v d1m6vc6 C:697-709,710-716,725-730,730-741,750-755 2scu d2scue2 E:27-39,42-48,59-64,65-77,95-101 1ce8 d1ce8a6 A:697-709,710-716,725-730,730-741,750-755 1cqi d1cqie2 E:27-39,42-48,59-64,65-77,95-101 1cqi d1cqib2 B:27-39,42-48,59-64,65-77,95-101 2nua d2nuae2 E:27-39,42-48,59-64,65-77,95-101 2nua d2nuab2 B:27-39,42-48,59-64,65-77,95-101 1cqj d1cqje2 E:27-39,42-48,59-64,65-77,95-101 1jll d1jllb2 B:27-39,42-48,59-64,65-77,95-101 1cqj d1cqjb2 B:27-39,42-48,59-64,65-77,95-101 1jdb d1jdbb6 B:696-708,709-714,724-729,729-740,749-754 2nu6 d2nu6e2 E:27-39,42-48,59-64,65-77,95-101 2nu6 d2nu6b2 B:27-39,42-48,59-64,65-77,95-101 2nu8 d2nu8e2 E:27-39,42-48,59-64,65-77,95-101 2nu8 d2nu8b2 B:27-39,42-48,59-64,65-77,95-101 1jll d1jlle2 E:27-39,42-48,59-64,65-77,95-101 1jdb d1jdbh6 H:696-708,709-714,724-729,729-740,749-754 2fpg d2fpgb2 B:27-39,42-48,66-71,72-85,102-108 1jkj d1jkje2 E:27-39,42-48,59-64,65-77,95-101 1jkj d1jkjb2 B:27-39,42-48,59-64,65-77,95-101 2fpi d2fpib2 B:27-39,42-48,66-71,72-85,102-108 2nu7 d2nu7e2 E:27-39,42-48,59-64,65-77,95-101 2nu7 d2nu7b2 B:27-39,42-48,59-64,65-77,95-101 1scu d1scue2 E:27-39,42-48,59-64,65-77,95-101 1euc d1eucb2 B:27-39,42-48,66-71,72-84,102-108 1eud d1eudb2 B:27-39,42-48,66-71,72-84,102-108 1ulz d1ulza3 A:139-151,152-160,167-172,172-191,193-201 2fp4 d2fp4b2 B:27-39,42-48,66-71,72-85,102-108 1m0w d1m0wb2 B:1362-1376,1377-1384,1390-1395,1394-1405,1411-1417 2fpp d2fppb2 B:27-39,42-48,66-71,72-84,102-108 1iow d1iowa2 A:127-138,139-146,153-159,159-175,176-182 2j9g d2j9ga3 A:141-153,154-161,168-174,174-190,197-203 2gpw d2gpwb3 B:141-153,154-161,168-174,174-191,197-203 1dv2 d1dv2b3 B:141-153,155-161,168-173,174-194,197-203 1dv2 d1dv2a3 A:141-153,154-161,168-174,174-194,197-203 2vr1 d2vr1a3 A:141-153,154-161,168-174,174-194,197-203 1iov d1iova2 A:118-125,139-146,153-159,159-175,176-182 2dln d2dlna2 A:127-138,139-146,153-159,159-175,176-182 1m0w d1m0wa2 A:362-376,377-384,391-395,394-405,411-417 1iow d1iowa2 A:118-125,139-146,153-159,159-175,176-182 2dln d2dlna2 A:118-125,139-146,153-159,159-175,176-182 1iov d1iova2 A:127-138,139-146,153-159,159-175,176-182 2gpw d2gpwa3 A:141-153,154-161,169-174,174-193,197-203 2gps d2gpsa3 A:141-153,154-161,169-174,174-194,197-203 1eyz d1eyzb3 B:137-149,151-157,164-169,173-185,191-197 1dv1 d1dv1b3 B:141-153,154-159,169-174,174-187,199-203 1kj9 d1kj9b3 B:137-149,151-157,164-169,173-185,191-197 1ez1 d1ez1b3 B:137-149,151-157,164-169,173-185,191-197 2gpw d2gpwc3 C:141-153,154-161,168-174,177-194,197-203 1vbg d1vbga3 A:63-82,93-100,110-115,202-220,238-245 1kc7 d1kc7a3 A:58-77,88-95,104-110,199-217,235-242 1vbh d1vbha3 A:63-82,93-100,110-115,202-220,238-245 1kbl d1kbla3 A:58-77,88-95,104-110,199-217,235-242 3eth d3etha3 A:105-114,116-122,130-135,135-143,149-155 1dik d1dika3 A:58-77,88-95,104-110,199-217,235-242 2gpw d2gpwd3 D:141-153,154-161,168-174,177-194,197-203 1ggo d1ggoa3 A:58-77,88-95,104-110,199-217,235-242 1jde d1jdea3 A:58-77,88-95,104-110,199-217,235-242 2gps d2gpsb3 B:141-153,154-161,168-174,177-194,197-203 2dik d2dika3 A:58-77,88-95,104-110,199-217,235-242 2r82 d2r82a3 A:58-77,88-95,104-110,199-217,235-242 7. d.311.1 ImmE5-like ImmE5-like alpha-beta(2)-alpha-beta; 2 layers, a/b; antiparallel beta-sheet, order 213 2fhz d2fhza1 A:31-45,47-57,67-71,80-99,101-108 2dfx d2dfxi1 I:30-44,46-56,66-70,75-98,100-107 8. d.346.1 SARS Nsp1-like SARS Nsp1-like complex alpha+beta fold; contains mixed beta-sheet barrel, n=6, S=10 2gdt d2gdta1 A:46-54,55-63,74-82,83-90,91-99 2hsx d2hsxa1 A:46-54,55-63,74-82,83-90,91-99 12. d.94.2 Putative transcriptional regulator TM1602, C-terminal domain HPr-like beta-alpha-beta(2)-alpha-beta-alpha; 2 layers: a/b; antiparallel sheet 1423 1j5y d1j5ya2 A:80-95,96-105,109-118,119-134,144-153 13. d.15.6 Superantigen toxins, C-terminal domain beta-Grasp (ubiquitin-like) core: beta(2)-alpha-beta(2); mixed beta-sheet 2143 1et6 d1et6a2 A:129-146,155-163,169-175,181-192,201-209 1et6 d1et6b2 B:129-146,155-163,169-175,181-192,201-209 1seb d1sebh2 H:156-173,184-192,193-201,209-220,228-235 1seb d1sebd2 D:156-173,184-192,193-201,209-220,228-235 1eu4 d1eu4a2 A:126-143,154-162,164-172,178-189,196-204 1lo5 d1lo5d2 D:151-168,180-188,193-199,205-216,224-232 1eu3 d1eu3a2 A:129-146,155-164,169-175,181-192,199-209 1jck d1jckd2 D:155-172,181-191,193-201,209-220,227-236 1jck d1jckb2 B:155-172,181-191,193-201,209-220,227-236 1goz d1goza2 A:1156-1173,1182-1192,1193-1201,1209-1220,1228-1236 2seb d2sebd2 D:156-173,183-192,193-201,209-220,228-236 1eu3 d1eu3b2 B:129-146,155-164,169-175,181-192,199-209 1fnu d1fnud2 D:1041-1058,1067-1077,1081-1086,1093-1104,1111-1120 1jwu d1jwud2 D:155-172,181-191,193-201,209-220,227-236 1jwm d1jwmd2 D:155-172,181-191,193-201,209-220,227-236 1goz d1gozb2 B:2156-2173,2182-2192,2193-2201,2209-2220,2227-2236 1dyq d1dyqa2 A:151-168,179-189,193-198,205-216,223-232 1sjh d1sjhd2 D:155-172,181-191,193-201,209-220,227-236 1i4g d1i4ga2 A:151-168,180-188,193-198,205-216,224-232 1ha5 d1ha5d2 D:4141-4158,4168-4177,4181-4186,4193-4204,4211-4220 1l0y d1l0yb2 B:141-158,168-177,181-186,193-204,211-220 1klu d1klud2 D:155-172,181-191,193-201,209-220,227-236 1jws d1jwsd2 D:155-172,181-191,193-201,209-220,227-236 2ipk d2ipkd2 D:155-172,181-191,193-201,209-220,227-236 1pyw d1pywd2 D:155-172,181-191,193-201,209-220,227-236 1klg d1klgd2 D:155-172,181-191,193-201,209-220,227-236 1fnu d1fnua2 A:141-158,167-177,181-186,193-204,211-220 1b1z d1b1zd2 D:141-158,168-177,181-186,193-204,211-220 2aq1 d2aq1f2 F:153-170,179-189,191-199,207-218,225-234 1b1z d1b1zb2 B:141-158,168-177,181-186,193-204,211-220 2aq1 d2aq1d2 D:153-170,179-189,191-199,207-218,225-234 2g9h d2g9hd2 D:121-138,162-171,175-181,187-198,205-214 1fnw d1fnwd2 D:1041-1058,1067-1077,1081-1086,1093-1104,1111-1120 1fnv d1fnvb2 B:441-458,467-477,481-486,493-504,511-520 1t5x d1t5xd2 D:155-172,181-191,193-201,209-220,227-236 1sxt d1sxta2 A:151-168,180-189,193-198,205-216,223-232 1fnv d1fnvc2 C:741-758,767-777,781-786,793-804,811-820 1d5z d1d5zc2 C:156-173,181-192,193-201,209-220,228-237 1fnv d1fnva2 A:141-158,167-177,181-186,193-204,211-220 1fnv d1fnvd2 D:1041-1058,1067-1077,1081-1086,1093-1104,1111-1120 1bxt d1bxtb2 B:152-169,177-188,190-198,206-217,224-234 1bxt d1bxta2 A:152-169,177-188,190-198,206-217,224-234 1l0y d1l0yd2 D:141-158,166-177,181-186,193-204,211-221 1ha5 d1ha5b2 B:2141-2158,2168-2177,2180-2186,2193-2204,2211-2220 1ha5 d1ha5a2 A:1141-1158,1168-1177,1180-1186,1193-1204,1211-1220 1se2 d1se2a2 A:155-172,180-191,193-201,209-220,227-237 1et9 d1et9a2 A:126-143,154-162,164-171,178-189,196-204 1d5m d1d5mc2 C:156-173,181-192,193-201,209-220,228-237 1ha5 d1ha5c2 C:3141-3158,3168-3177,3180-3186,3193-3204,3211-3220 1fnu d1fnuc2 C:741-758,767-777,780-786,793-804,811-820 1ck1 d1ck1a2 A:155-172,180-191,193-201,209-220,227-237 3seb d3seba2 A:156-173,181-192,193-201,209-220,227-237 2aq1 d2aq1b2 B:153-170,178-189,191-199,207-218,225-235 1uup d1uupd2 D:4141-4158,4167-4177,4180-4186,4193-4204,4211-4220 1b1z d1b1zc2 C:141-158,168-177,180-186,193-204,211-220 2aq2 d2aq2b2 B:153-170,178-189,191-199,207-218,225-235 1i4h d1i4ha2 A:151-168,180-188,192-198,205-216,224-232 1b1z d1b1za2 A:141-158,168-177,180-186,193-204,211-220 1fnw d1fnwf2 F:1641-1658,1667-1677,1680-1686,1693-1704,1711-1720 1fnw d1fnwh2 H:2241-2258,2267-2277,2280-2286,2293-2304,2311-2320 1esf d1esfb2 B:151-168,180-189,192-198,205-216,223-232 1d5x d1d5xc2 C:156-173,182-192,193-200,209-220,228-236 1esf d1esfa2 A:151-168,180-189,192-198,205-216,223-232 1fnw d1fnwg2 G:1941-1958,1967-1977,1980-1986,1993-2004,2011-2020 1fnw d1fnwe2 E:1341-1358,1367-1377,1380-1386,1393-1404,1411-1420 1fnw d1fnwc2 C:741-758,767-777,780-786,793-804,811-820 1sxt d1sxtb2 B:151-168,180-189,192-198,205-216,223-232 1i4g d1i4gb2 B:151-168,180-189,192-198,205-216,223-232 1fnw d1fnwa2 A:141-158,167-177,180-186,193-204,211-220 1ktk d1ktkb2 B:128-145,155-163,165-173,180-191,198-207 1sje d1sjed2 D:155-172,181-191,193-200,209-220,227-236 1fnw d1fnwb2 B:441-458,467-477,480-486,493-504,511-520 2aq3 d2aq3h2 H:153-170,179-189,191-198,207-218,225-234 2aq1 d2aq1h2 H:153-170,179-189,191-198,207-218,225-234 2aq3 d2aq3f2 F:153-170,179-189,191-198,207-218,225-234 1l0x d1l0xb2 B:141-158,166-177,180-186,193-204,211-221 2aq3 d2aq3d2 D:153-170,180-189,191-198,207-218,225-234 1l0x d1l0xd2 D:141-158,166-177,180-186,193-204,211-221 1se4 d1se4a2 A:156-173,181-192,193-200,209-220,228-237 1uup d1uupc2 C:3141-3158,3166-3177,3180-3186,3193-3204,3211-3221 1cqv d1cqva2 A:155-172,182-191,193-200,209-220,227-236 1uup d1uupb2 B:2141-2158,2166-2177,2180-2186,2193-2204,2211-2221 1i4h d1i4hb2 B:151-168,180-189,192-198,205-216,223-232 1se3 d1se3a2 A:156-173,181-192,193-200,209-220,228-237 1ty2 d1ty2b2 B:130-147,156-165,169-175,182-193,200-210 1uup d1uupa2 A:1141-1158,1166-1177,1180-1186,1193-1204,1211-1221 1i4q d1i4qa2 A:155-172,182-191,193-200,209-220,227-236 2aq3 d2aq3b2 B:153-170,179-189,191-198,207-218,225-234 1uns d1unsa2 A:155-172,182-191,193-200,209-220,227-236 1ktk d1ktka2 A:128-145,154-163,165-173,180-191,198-208 1ty0 d1ty0b2 B:130-147,156-165,168-175,182-193,200-210 1ktk d1ktkd2 D:128-140,154-163,165-173,180-191,198-208 1ty0 d1ty0a2 A:130-147,156-165,167-175,182-193,200-210 1i4r d1i4ra2 A:155-172,182-191,193-200,209-220,227-236 1fnu d1fnub2 B:441-458,466-477,480-486,493-504,511-521 1v1p d1v1pb2 B:143-160,168-176,178-186,190-197,202-212 1ty2 d1ty2c2 C:130-147,156-165,168-175,182-193,200-210 1ty0 d1ty0c2 C:130-147,156-165,168-175,182-193,200-210 1i4p d1i4pa2 A:155-172,182-191,193-200,209-220,227-236 1ty2 d1ty2a2 A:130-147,156-165,167-175,182-193,200-210 1enf d1enfa2 A:134-151,160-169,172-178,185-196,203-213 1ktk d1ktkc2 C:128-145,154-163,165-173,180-191,198-208 1f77 d1f77b2 B:134-151,160-169,172-178,185-196,203-213 1i4x d1i4xa2 A:155-172,180-191,193-200,209-220,227-237 1an8 d1an8a2 A:128-145,154-163,165-173,180-191,198-208 1d6e d1d6ec2 C:156-173,181-192,193-200,209-220,228-237 1sbb d1sbbd2 D:156-173,181-192,193-200,209-220,227-237 1f77 d1f77a2 A:134-151,160-169,172-178,185-196,203-213 1ste d1stea2 A:155-172,180-191,193-200,209-220,227-237 1hqr d1hqrd2 D:628-645,654-663,665-673,680-691,698-708 1hxy d1hxyd2 D:134-151,160-169,171-178,185-196,203-213 1sbb d1sbbb2 B:156-173,181-192,193-200,209-220,227-237 1ewc d1ewca2 A:134-151,158-169,172-178,185-196,203-214 16. e.24.1 Ribosomal protein L1 Ribosomal protein L1 2 domains: (1) alpha+beta; (2) alpha/beta (interrupts domain 1) 1mzp d1mzpa_ A:4-17,28-37,163-172,175-195,199-208 1cjs d1cjsa_ A:2-17,24-33,158-167,170-190,195-204 1ad2 d1ad2a_ A:21-34,39-48,169-178,181-200,208-217 1zho d1zhoa1 A:21-34,39-48,169-178,181-200,208-217 2hw8 d2hw8a1 A:21-34,39-48,169-178,181-200,208-217 2hgq d2hgqc1 C:21-34,40-48,169-174,181-200,208-217 1zho d1zhog1 G:21-34,39-48,169-178,181-200,208-217 1zho d1zhoc1 C:21-34,39-48,169-178,181-200,208-217 1vsp d1vspa1 A:22-35,40-49,173-179,182-201,209-218 1u63 d1u63c1 C:1-18,24-33,158-167,170-190,195-204 2hgu d2hguc1 C:21-34,40-48,169-174,181-200,208-217 1zho d1zhoe1 E:21-34,39-48,169-178,181-200,208-217 2hgj d2hgjc1 C:21-34,40-48,169-174,181-200,208-217 1dwu d1dwub_ B:2-18,24-33,158-167,170-190,195-204 1dwu d1dwua_ A:2-18,24-33,158-167,170-190,195-204 1u63 d1u63a1 A:1-18,24-33,158-167,170-189,195-204 1i2a d1i2aa_ A:2-18,24-33,158-167,170-190,195-204 1yl3 d1yl3c1 C:21-34,39-48,169-178,181-200,208-216 1vsa d1vsaa1 A:22-35,40-49,175-179,182-201,209-218 19. d.310.1 VC0467-like VC0467-like complex fold; contains bifurcated beta-sheet structure folded into pseudo barrel 2haf d2hafa1 A:61-70,97-104,117-123,123-130,138-144 2aj2 d2aj2a1 A:59-68,95-102,115-121,121-128,136-142 2do8 d2do8a1 A:48-57,82-89,103-108,109-119,124-130 2gzo d2gzoa1 A:47-58,83-89,102-108,107-118,124-130 22. d.58.47 Hypothetical protein VC0424 Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1nxi d1nxia_ A:9-32,38-47,77-91,93-112,113-121 26. d.309.1 AMMECR1-like AMMECR1-like duplication; contains two beta(2)-alpha-beta(2) structural repeats, swapped with C-terminal strands; extra N-terminal helix and C-terminal strand 1wsc d1wsca1 A:130-139,143-149,153-159,168-181,192-204 1vaj d1vaja1 A:120-129,133-140,141-147,157-170,181-195 1zq7 d1zq7a1 A:115-124,128-135,136-143,152-165,175-189 1zq7 d1zq7d1 D:115-124,128-135,136-142,152-165,175-189 1zq7 d1zq7c1 C:115-124,128-135,136-142,152-165,175-189 1zq7 d1zq7b1 B:115-124,128-135,136-142,152-165,175-189 1zq7 d1zq7d1 D:115-124,128-135,136-142,167-174,175-189 1vaj d1vaja1 A:120-129,133-140,141-147,172-179,181-195 30. b.8.1 TRAF domain-like has a circularly permuted immunoglobulin-fold topology with extra strand ! TRAF domain-like sandwich; 8 strands in 2 sheets; greek-key 1d01 d1d01f1 F:360-371,428-436,441-449,474-481,488-497 1d01 d1d01d1 D:360-371,428-436,441-449,474-481,488-497 1d01 d1d01e1 E:360-371,428-436,441-449,474-481,488-497 1czy d1czyc1 C:360-371,428-436,441-449,474-481,488-497 1czy d1czyb1 B:360-371,428-436,441-449,474-481,488-497 1czy d1czya1 A:360-371,428-436,441-449,474-481,488-497 1d01 d1d01b1 B:360-371,428-436,441-449,474-481,488-497 1d01 d1d01a1 A:360-371,428-436,441-449,474-481,488-497 1d01 d1d01c1 C:360-371,428-436,441-449,474-481,488-498 1d0j d1d0jd1 D:360-371,428-436,441-449,474-481,488-497 1ca4 d1ca4d1 D:360-371,428-436,441-449,474-481,488-497 1d00 d1d00c1 C:360-371,428-436,441-449,474-482,488-497 1d00 d1d00e1 E:360-371,428-436,441-449,474-482,488-497 1d0a d1d0ad1 D:360-371,428-436,441-449,474-481,488-497 1d0j d1d0ja1 A:360-371,428-436,441-449,474-481,488-497 1d00 d1d00h1 H:360-371,428-436,441-449,474-482,488-497 1d00 d1d00b1 B:360-371,428-436,441-449,474-482,488-497 1d0a d1d0ac1 C:360-371,428-436,441-449,474-481,488-497 1ca4 d1ca4b1 B:360-371,428-436,441-449,474-481,488-497 1d00 d1d00a1 A:360-371,428-436,441-449,474-482,488-497 1d0j d1d0jf1 F:360-371,428-436,441-449,474-481,488-497 1d0a d1d0aa1 A:360-371,428-436,441-449,474-481,488-497 1d0a d1d0ae1 E:360-371,428-436,441-449,474-481,488-497 1d0j d1d0jb1 B:360-371,428-436,441-449,474-481,488-497 1d0a d1d0ab1 B:360-371,428-436,441-449,474-481,488-497 1d00 d1d00g1 G:360-371,428-436,441-449,474-482,488-497 1ca4 d1ca4c1 C:360-371,428-436,441-449,474-481,488-498 1ca4 d1ca4e1 E:360-371,428-436,441-449,474-481,488-498 1d0j d1d0jc1 C:360-371,428-436,441-449,474-481,488-498 1ca4 d1ca4a1 A:360-371,428-436,441-449,474-481,488-498 1ca4 d1ca4f1 F:360-371,428-436,441-449,474-481,488-498 1czz d1czzb1 B:360-371,428-436,441-449,474-481,488-497 1l0a d1l0aa1 A:360-371,428-438,440-450,475-483,488-497 1d00 d1d00d1 D:360-371,428-436,441-449,474-481,488-497 1czz d1czza1 A:360-371,428-436,441-449,474-481,488-497 1czz d1czzc1 C:360-371,428-436,441-449,474-481,488-497 1ca9 d1ca9b1 B:360-371,428-436,441-449,474-481,488-497 1ca9 d1ca9e1 E:360-371,428-436,441-449,474-482,488-497 1ca9 d1ca9a1 A:360-371,428-436,441-449,474-481,488-497 1kzz d1kzza1 A:360-371,429-436,442-449,475-483,488-497 1ca9 d1ca9f1 F:360-371,428-436,441-449,474-481,488-497 1flk d1flka1 A:360-371,429-436,442-449,475-483,488-497 1fll d1fllb1 B:360-371,428-436,442-450,475-483,488-497 1ca9 d1ca9d1 D:360-371,428-436,441-449,474-481,488-497 1ca9 d1ca9c1 C:360-371,428-436,441-449,474-481,488-498 31. e.2.1 Replication terminator protein (Tus) Replication terminator protein (Tus) contains a cluster of helices and a beta-sandwich 1ecr d1ecra_ A:5-32,32-41,58-63,62-77,93-102 2i05 d2i05a1 A:5-32,32-41,58-63,62-77,93-103 2i06 d2i06a1 A:5-32,32-41,58-63,62-77,94-103