1. b.116.1 Viral chemokine binding protein m3
Viral chemokine binding protein m3 consists of two different beta-sandwich domains of partial topological similarity to immunoglobulin-like folds
1mkf d1mkfb_ B:211-218,243-248,255-261,278-286,371-379
2nyz d2nyza1 A:211-218,243-248,255-261,278-286,371-379
2nyz d2nyzb1 B:211-218,243-248,255-261,278-286,371-379
2nz1 d2nz1b1 B:211-217,243-248,255-261,278-286,371-378
1ml0 d1ml0a_ A:211-217,243-248,255-261,278-286,371-378
2nz1 d2nz1a1 A:211-217,243-248,255-261,278-286,371-378
2nz1 d2nz1x1 X:211-217,243-248,255-261,278-286,371-378
1mkf d1mkfa_ A:211-217,243-248,255-261,278-286,371-378
2. b.150.1 Putative glucosidase YicI, C-terminal domain
Putative glucosidase YicI, C-terminal domain sandwich; 10 strands in two sheets
1we5 d1we5b1 B:684-692,695-706,708-720,721-729,732-740
1xsi d1xsif1 F:684-692,695-706,708-720,721-729,732-740
1xsk d1xskf1 F:684-692,695-706,708-720,721-729,732-740
1xsi d1xsie1 E:684-692,695-706,708-720,721-729,732-740
1xsi d1xsib1 B:684-692,695-706,708-720,721-729,732-740
1xsj d1xsjd1 D:684-692,695-706,708-720,721-729,732-740
1xsk d1xskc1 C:684-692,695-706,708-720,721-729,732-740
1xsk d1xskd1 D:684-692,695-706,708-720,721-729,732-740
1xsi d1xsia1 A:684-692,696-706,708-720,721-729,732-740
1xsj d1xsjf1 F:684-692,696-706,708-720,721-729,732-740
1xsj d1xsje1 E:684-692,696-706,708-720,721-729,732-740
1we5 d1we5a1 A:684-692,695-706,708-720,721-729,732-740
1xsj d1xsjc1 C:684-692,696-706,708-720,721-729,732-740
1we5 d1we5f1 F:684-692,696-706,708-720,721-729,732-740
1we5 d1we5d1 D:684-692,696-706,708-720,721-729,732-740
1xsk d1xske1 E:684-692,696-706,708-720,721-729,732-740
1xsk d1xska1 A:684-692,696-706,708-720,721-729,732-740
2f2h d2f2he1 E:684-692,695-706,708-720,721-729,732-740
1xsk d1xskb1 B:684-692,695-706,708-720,721-729,732-740
1xsj d1xsja1 A:684-692,695-706,708-720,721-729,732-740
2f2h d2f2hd1 D:684-692,695-706,708-720,721-729,732-740
1xsi d1xsid1 D:684-692,696-706,708-720,721-729,732-740
2f2h d2f2hf1 F:684-692,696-706,708-720,721-729,732-740
1xsi d1xsic1 C:684-692,696-706,708-720,721-729,732-740
1we5 d1we5c1 C:684-692,696-706,708-720,721-729,732-740
1we5 d1we5e1 E:684-692,696-706,708-720,721-729,732-740
2f2h d2f2hb1 B:684-692,696-706,708-720,721-729,732-740
2f2h d2f2hc1 C:684-692,696-706,708-720,721-729,732-740
2f2h d2f2ha1 A:684-692,696-706,708-720,721-729,732-740
1xsj d1xsjb1 B:684-692,696-706,708-720,721-729,732-740
3. b.71.1 Glycosyl hydrolase domain this domain is C-terminal to the catalytic beta/alpha barrel domain !
Glycosyl hydrolase domain folded sheet; greek-key
2bfg d2bfga1 A:2-6,360-367,368-375,377-386,394-404
2bfg d2bfgd1 D:2-6,360-367,368-375,377-386,394-404
2bfg d2bfgf1 F:2-6,360-367,368-375,377-386,394-404
2bfg d2bfge1 E:2-6,360-367,368-375,377-386,394-404
2bfg d2bfgg1 G:2-6,360-367,368-375,377-386,394-404
2bfg d2bfgc1 C:2-6,360-367,368-375,377-386,394-404
2bfg d2bfgh1 H:2-6,360-367,368-375,377-386,394-404
2bfg d2bfgb1 B:2-6,360-367,368-375,377-386,394-404
2bs9 d2bs9a1 A:2-6,360-367,368-375,377-386,394-404
2bs9 d2bs9b1 B:2-6,360-367,368-375,377-386,394-404
1uhv d1uhvd1 D:1-6,359-366,367-374,376-385,393-403
1px8 d1px8a1 A:1-6,359-366,367-374,376-385,393-403
1px8 d1px8b1 B:1-6,359-366,367-374,376-385,393-403
1uhv d1uhvb1 B:1-6,359-366,367-374,376-385,393-403
1uhv d1uhva1 A:1-6,359-366,367-374,376-385,393-403
1uhv d1uhvc1 C:1-6,359-366,367-374,376-385,393-403
2c7f d2c7fb1 B:3-10,387-391,409-419,420-430,432-444
2c7f d2c7ff1 F:3-10,387-391,409-419,420-430,432-444
2c7f d2c7fc1 C:4-10,387-391,409-419,420-430,432-444
2c7f d2c7fd1 D:4-10,387-391,409-419,420-430,432-444
2c8n d2c8nc1 C:4-9,387-391,409-418,421-430,434-443
1qw8 d1qw8a1 A:5-10,385-389,407-417,418-429,433-440
1pz3 d1pz3a1 A:5-10,385-389,407-417,418-429,433-440
1y7v d1y7va1 A:65-70,429-434,444-452,454-464,467-475
2j25 d2j25b1 B:65-70,429-434,444-452,454-464,467-475
2v3e d2v3ea1 A:65-70,429-434,444-452,454-464,467-475
1qw9 d1qw9a1 A:5-10,385-389,407-417,418-429,433-440
2v3d d2v3da1 A:65-70,429-434,444-452,454-464,467-475
1ogs d1ogsb1 B:65-70,429-434,444-452,454-464,467-475
1nof d1nofa1 A:31-37,320-326,334-343,345-354,356-367
1pz2 d1pz2a1 A:5-10,385-389,407-417,418-429,433-440
2nt0 d2nt0b1 B:65-70,429-434,444-452,454-464,467-475
2nsx d2nsxb1 B:65-70,429-434,444-452,454-464,467-475
2nsx d2nsxa1 A:65-70,429-434,444-452,454-464,467-475
1qw8 d1qw8b1 B:5-10,385-389,407-417,418-429,433-440
1pz3 d1pz3b1 B:5-10,385-389,407-417,418-429,433-440
2f61 d2f61b1 B:65-70,429-434,444-452,454-462,465-475
1pz2 d1pz2b1 B:5-10,385-389,407-417,418-429,433-440
2nt1 d2nt1a1 A:65-70,429-434,444-452,454-464,467-475
1qw9 d1qw9b1 B:5-10,385-389,407-417,418-429,433-440
2f61 d2f61a1 A:65-70,429-434,444-452,454-464,467-475
4. a.102.1 Six-hairpin glycosidases
alpha/alpha toroid multihelical; up to seven alpha-hairpins are arranged in closed circular array; there may be sequence similarities between different superfamilies
1h54 d1h54b1 B:694-701,706-716,717-726,727-736,738-744
1h54 d1h54a1 A:694-701,706-716,717-726,727-736,738-744
5. d.190.1 Chorismate lyase-like
Chorismate lyase-like duplication of alpha(2)-beta(3) motif; antiparallel beta sheet, order 123654
2fa1 d2fa1a1 A:89-94,127-139,140-151,223-232,234-241
2ikk d2ikka1 A:84-89,125-137,138-149,218-230,232-238
2fa1 d2fa1b1 B:89-94,127-139,140-151,223-232,234-241
6. b.1.19 Antigen MPT63/MPB63 (immunoprotective extracellular protein)
Immunoglobulin-like beta-sandwich sandwich; 7 strands in 2 sheets; greek-key ! some members of the fold have additional strands
1lmi d1lmia_ A:4-8,11-19,20-34,45-58,123-131
List of motif hits that are not present in SCOP but are found in PDB for pattern ID: 13 (enumeration index: query61) of S5
2vrk C:4-11,379-385,401-410,412-421,425-435
2vrk A:4-11,379-385,401-410,412-421,423-435
2vrk B:4-11,379-385,401-410,412-421,423-435
3l4y A:751-758,762-771,784-793,794-804,814-820
3ctt A:751-758,762-771,784-793,794-804,815-820
3f8l B:75-80,120-134,136-146,214-226,228-237
3kl3 C:3-9,298-305,313-322,323-332,334-345
3kl3 A:4-9,299-305,313-322,323-332,335-345
3kl3 D:4-9,298-305,313-322,323-332,335-345
3kl3 B:4-9,298-305,313-322,323-333,336-345
3top B:1733-1740,1746-1753,1765-1775,1776-1787,1794-1803
3top A:1733-1740,1746-1753,1765-1775,1776-1787,1794-1803
3mfb C:379-386,393-398,405-411,413-419,459-465
3mfb D:379-386,393-398,405-411,413-419,459-465
3mfb B:379-386,393-398,405-411,413-419,459-465
3mfb A:379-386,393-398,405-411,413-419,459-465
3ixy D:8-14,22-27,30-37,65-70,71-79
3ixy F:8-14,22-27,30-37,65-70,71-79
3ixy E:8-14,22-27,30-37,65-70,71-79
3gxm B:65-70,429-434,444-452,454-464,467-475
3ixx D:6-12,20-25,28-35,64-69,70-78
3ixx E:6-12,20-26,28-35,64-69,70-78
3ixx F:6-12,20-25,28-35,64-69,70-78
3ke0 A:65-70,429-434,444-452,454-464,467-475
3zr5 A:25-31,345-349,351-359,363-371,389-399
2x2i A:902-909,914-923,937-948,949-959,966-974
2x2i C:902-910,914-923,937-948,949-961,966-974
2x2i B:902-910,914-923,937-948,949-961,966-974
2x2i D:902-910,914-923,936-948,949-962,966-974
2eac A:797-801,809-819,821-830,832-842,845-851
2eac B:797-801,809-819,821-830,832-842,845-851
3c6d D:8-14,22-27,30-37,65-70,71-79
3c6d F:8-14,22-27,30-37,65-70,71-79
3c6d E:8-14,22-27,30-37,65-70,71-79
2qly A:751-758,762-771,783-793,794-805,815-820
3gtn B:4-9,299-305,313-322,323-333,336-345
3gtn A:4-9,299-305,313-322,323-333,336-345
3eet B:77-82,130-142,143-155,226-238,240-245
3gxf D:65-70,429-434,444-452,454-464,467-475
2g3n F:613-619,620-626,628-635,636-642,647-653
2g3n D:613-619,620-626,628-635,636-642,647-653
2g3n C:613-619,620-626,628-635,636-642,647-653
2g3n A:613-619,620-626,628-635,636-642,647-653
2g3n E:613-619,620-626,628-635,636-642,647-653
2g3n B:613-619,620-626,628-635,636-642,647-653
2vrq A:4-11,379-385,401-410,412-421,423-435
2vrq B:4-11,379-385,401-410,412-421,423-435
2vrq C:4-11,379-385,401-410,412-421,425-435
3l4v A:751-758,762-771,783-793,794-805,814-820
3fw6 A:34-41,454-458,466-476,477-488,492-501
3l4x A:751-758,762-771,783-793,794-805,814-820
2wkl B:65-70,429-434,444-452,454-464,467-475
3cih A:647-654,659-668,669-678,679-686,688-696
3ton A:1733-1740,1745-1753,1766-1775,1776-1786,1794-1803
3ton B:1733-1740,1745-1753,1766-1775,1776-1786,1794-1803
3gxi B:65-70,429-434,444-452,454-464,467-475
3gxi D:65-70,429-434,444-452,454-464,467-475
2xvl A:890-897,899-908,920-930,931-939,949-958
3c6e C:8-14,22-27,30-37,65-70,71-79
3f8m A:75-80,120-134,135-146,214-226,228-237
3f8m B:75-80,122-134,135-146,214-226,228-237
3ii1 A:30-41,454-458,466-476,477-488,491-501
2qmj A:751-758,762-771,783-793,794-805,814-820
3clw F:28-33,428-434,449-458,459-468,470-479
3clw B:28-33,428-434,449-458,459-469,472-479
3clw A:28-33,428-434,449-458,459-468,470-479
2eab A:797-801,809-819,821-830,832-842,845-851
2eab B:797-801,809-819,821-830,832-842,845-851
3c6r F:8-14,22-28,29-37,65-70,71-79
3c6r D:8-14,22-28,29-37,65-70,71-79
3c6r E:8-14,22-28,29-37,65-70,71-79
2eae A:797-801,809-819,821-830,832-842,845-851
3l4t A:751-758,762-771,783-793,794-805,814-820
3lpp A:780-787,792-800,812-822,823-834,843-849
2y24 A:31-37,320-326,334-343,345-354,356-367
2x2h C:902-910,914-923,937-948,949-959,966-974
2x2h B:902-910,914-923,937-948,949-959,966-974
2x2h A:902-910,914-923,937-948,949-961,966-974
2x2h D:902-910,914-923,937-948,949-959,966-974
3l4u A:751-758,762-771,783-793,794-805,814-820
3kl0 A:4-9,298-305,313-322,323-333,336-345
3kl0 D:4-9,298-305,313-322,323-332,334-345
3kl0 B:4-9,298-305,313-322,323-333,336-345
3kl0 C:3-9,298-305,313-322,323-333,336-345
2g3m F:613-619,620-626,628-635,636-642,647-653
2g3m A:613-619,620-626,628-635,636-642,647-653
2g3m C:613-619,620-626,628-635,636-642,647-653
2g3m D:613-619,620-626,628-635,636-642,647-653
2g3m E:613-619,620-626,628-635,636-642,647-653
2g3m B:613-619,620-626,628-635,636-642,647-653
3c5x C:8-14,22-27,30-37,65-70,71-79
2ead B:797-801,809-819,821-830,832-842,845-851
2ead A:797-801,809-819,821-830,832-842,845-851
2x2j A:902-910,914-923,937-948,949-961,966-974
2x2j D:902-910,914-923,936-948,949-962,966-974
2x2j C:902-910,914-923,937-948,949-959,966-974
2x2j B:902-910,914-923,937-948,949-961,966-974
3iya E:8-14,22-28,29-37,65-70,71-79
3iya F:8-14,22-28,29-37,65-70,71-79
3iya D:8-14,22-28,29-37,65-70,71-79
3l4z A:751-758,762-771,783-793,794-805,814-820
2xvk A:890-897,899-908,920-930,931-939,949-958
2b5l A:3-9,956-961,963-970,972-979,1087-1091
3i7n A:3-9,956-961,963-970,972-979,1087-1091
3l4w A:751-758,762-771,783-793,794-805,814-820
2xvg A:890-897,899-908,919-930,931-939,949-958
2nxv A:108-114,115-119,128-136,140-144,191-197
2nxv B:108-114,115-119,128-136,140-144,191-197
2qgi A:108-114,115-119,128-136,140-144,191-197
2qgi B:108-114,115-119,128-136,140-144,191-197
2okx A:887-894,899-908,910-920,923-933,935-940
2okx B:887-894,899-908,910-920,923-933,935-940
3kl5 B:4-9,298-305,313-322,323-333,336-345
3kl5 A:3-9,298-305,313-322,323-332,334-345
3kl5 D:3-8,298-305,313-322,323-332,336-344
3kl5 C:3-9,298-305,313-322,323-332,334-345
2hye A:3-9,956-961,963-970,972-980,1087-1091