List of the counted superfamily hits for pattern ID: 1217 (enumeration index: query62.97.1107.2260.2388) of S5

List of the counted superfamily hits for pattern ID: 1217 (enumeration index: query62.97.1107.2260.2388) of S5

SCOP superfamily ID superfamiily description corresponding fold description
a.65.1Annexin duplication: consists of four domains of the same fold ! Annexin 5 helices; folded leaf, closed
a.103.1Citrate synthase Citrate synthase multihelical; consists of two all-alpha domains
a.118.8TPR-like alpha-alpha superhelix multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix
a.209.1ADP-ribosylglycohydrolase ADP-ribosylglycohydrolase multihelical; bundle
a.268.1PTPA-like PTPA-like multihelical
a.71.1ERP29 C domain-like ERP29 C domain-like 5 helices; bundle
a.208.1DhaL-like DhaL-like multihelical; bundle
f.1.3delta-Endotoxin (insectocide), N-terminal domain Toxins' membrane translocation domains multi-helical domains of various folds which is thought to unfold in the membrane
f.40.1V-type ATP synthase subunit C duplication: consists of three similar structural parts ! V-type ATP synthase subunit C 9 transmembrane helices
a.256.1RUN domain-like RUN domain-like multihelical; 3-helical bundle similar to one half of the DEATH domain fold is flanked by two alpha-hairpins forming a four-helical bundle; the axes of the three-helical and four-helical bundles are aproximately orthogonal to each other
a.246.1Hyaluronidase post-catalytic domain-like Hyaluronidase domain-like 5 helices; bundle, closed, left-handed twist; up-and-down (meander) topology
f.20.1Clc chloride channel Clc chloride channel core: 18 transmembrane helices
a.24.13Domain of the SRP/SRP receptor G-proteins Four-helical up-and-down bundle core: 4 helices; bundle, closed or partly opened, left-handed twist; up-and-down
a.89.1Methyl-coenzyme M reductase alpha and beta chain C-terminal domain Methyl-coenzyme M reductase alpha and beta chain C-terminal domain multihelical bundle; contains buried central helix
a.192.1N-terminal domain of adenylylcyclase associated protein, CAP N-terminal domain of adenylylcyclase associated protein, CAP 6 helices: bundle; left-handed twist, up-and-down topology
d.228.1Replication modulator SeqA, C-terminal DNA-binding domain Replication modulator SeqA, C-terminal DNA-binding domain consists of seven alpha-helices and three-stranded beta-sheet
a.118.25TROVE domain-like consist of two superhelical sections arranged like a horse-shoe ! alpha-alpha superhelix multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix
a.211.1HD-domain/PDEase-like HD-domain/PDEase-like multihelical; consists of two different alpha-helical bundles
a.129.1GroEL equatorial domain-like duplication: two 4-helical subdomains are related by a pseudo dyad passing through the ATP-binding site ! GroEL equatorial domain-like multihelical; 8 helices arranged in 2 parallel layers
a.88.1LigA subunit of an aromatic-ring-opening dioxygenase LigAB LigA subunit of an aromatic-ring-opening dioxygenase LigAB multihelical; contains compact array of 6 short helices
a.79.1NusB-like NusB-like 6 helices: bundle; one central helix is surrounded by 5 others
a.173.1Poly A polymerase C-terminal region-like the neck subdomain is an alpha-alpha superhelix; the tail subdomain is similar to the RuvA C-terminal domain-like ! Poly A polymerase C-terminal region-like multihelical; can be divided into three subdomains (neck, body and tail)
a.104.1Cytochrome P450 Cytochrome P450 multihelical
a.118.5Bacterial muramidases alpha-alpha superhelix multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix
e.45.1Antivirulence factor Antivirulence factor contains a helical bundle with a buried helix and an alpha+beta insert domain
f.44.1Ammonium transporter Ammonium transporter 11 transmembrane helices; duplication: consist of 2 structural repeats of five helices each plus extra C-terminal helix
a.118.3Sec7 domain alpha-alpha superhelix multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix
f.1.1Colicin Toxins' membrane translocation domains multi-helical domains of various folds which is thought to unfold in the membrane
e.72.1SSO1389-like SSO1389-like 2 domains; d1: [alpha/beta, central parallel beta-sheet of 6 strands, order 321456, Rossmann-like]; d2: [alpha+beta, cluster of helices and a small 4-stranded beta-sheet]
a.265.1Fic-like Fic-like multihelical; one central helix is surrounded by seven helices
a.29.6Plant invertase/pectin methylesterase inhibitor contains a short alpha-hairpin at the N-terminal extension ! Bromodomain-like 4 helices; bundle; minor mirror variant of up-and-down topology
a.246.3FLJ32549 domain-like Hyaluronidase domain-like 5 helices; bundle, closed, left-handed twist; up-and-down (meander) topology
a.29.3Acyl-CoA dehydrogenase C-terminal domain-like multidomain flavoprotein; N-terminal domain is all-alpha; the middle domain is open (5,8) barrel ! Bromodomain-like 4 helices; bundle; minor mirror variant of up-and-down topology