1. c.94.1 Periplasmic binding protein-like II Similar in architecture to the superfamily I but partly differs in topology !
Periplasmic binding protein-like II consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication ! mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
1uqw d1uqwb_ B:5-13,25-36,216-220,453-468,473-477
1uqw d1uqwa_ A:5-12,25-36,216-220,453-468,473-477
2. c.68.1 Nucleotide-diphospho-sugar transferases
Nucleotide-diphospho-sugar transferases 3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest
2jcl d2jcla1 A:1128-1136,1143-1155,1219-1225,1282-1287,1353-1357
1vzu d1vzub_ B:1128-1136,1135-1155,1219-1225,1282-1287,1353-1357
2jco d2jcoa1 A:128-136,143-155,219-225,282-287,353-357
2jcl d2jclb1 B:2128-2136,2143-2155,2219-2225,2282-2287,2353-2357
1g93 d1g93a_ A:128-136,135-155,219-225,282-287,353-357
1fg5 d1fg5n_ N:47-55,54-74,138-144,201-206,272-276
1vzu d1vzua_ A:128-136,135-155,219-225,282-287,353-357
2vs5 d2vs5b1 B:128-136,135-155,219-225,282-287,353-357
1ss9 d1ss9a_ A:1-9,8-27,98-103,155-160,241-245
2rix d2rixa1 A:115-122,122-141,205-211,268-273,340-344
2rj8 d2rj8a1 A:115-122,122-141,205-211,268-273,340-344
1zj2 d1zj2a1 A:115-123,122-141,205-211,268-273,340-344
1gwv d1gwvb_ B:128-136,135-155,219-225,282-287,353-357
1o7o d1o7ob_ B:1128-1136,1135-1155,1219-1225,1282-1287,1353-1357
2vs5 d2vs5a1 A:128-136,135-155,219-225,282-287,353-357
1gx0 d1gx0b_ B:128-136,135-155,219-225,282-287,353-357
2jcj d2jcja1 A:128-136,135-155,219-225,282-287,353-357
1gx0 d1gx0a_ A:128-136,135-155,219-225,282-287,353-357
1vzx d1vzxb_ B:1128-1136,1135-1155,1219-1225,1282-1287,1353-1357
1k4v d1k4vb_ B:1128-1136,1135-1155,1219-1225,1282-1287,1353-1357
2a8u d2a8ua1 A:115-123,122-141,205-211,268-273,340-344
1lzj d1lzja_ A:115-123,122-141,205-211,268-273,340-344
2riy d2riya1 A:115-123,122-141,205-211,268-273,340-344
2vfz d2vfzb1 B:1128-1136,1135-1155,1219-1225,1282-1287,1353-1357
1k4v d1k4va_ A:128-136,135-155,219-225,282-287,353-357
2jck d2jcka1 A:1128-1136,1135-1155,1219-1225,1282-1287,1353-1357
1gww d1gwwa_ A:128-136,135-155,219-225,282-287,353-357
1gww d1gwwb_ B:128-136,135-155,219-225,282-287,353-357
2rj9 d2rj9a1 A:115-122,122-141,205-211,268-273,340-344
1o7o d1o7oa_ A:128-136,135-155,219-225,282-287,353-357
2vfz d2vfza1 A:128-136,135-155,219-225,282-287,353-357
2rit d2rita1 A:115-123,122-141,205-211,268-273,340-344
1g9r d1g9ra_ A:1-9,8-27,98-103,155-160,241-245
1r80 d1r80a_ A:115-123,122-141,205-211,268-273,340-344
1zj3 d1zj3a1 A:115-123,122-141,205-211,268-273,340-344
1gwv d1gwva_ A:128-136,135-155,219-225,282-287,353-357
1vzt d1vzta1 A:128-136,135-155,219-225,282-287,353-357
1vzx d1vzxa_ A:128-136,135-155,219-225,282-287,353-357
1vzt d1vztb1 B:1128-1136,1135-1155,1219-1225,1282-1287,1353-1357
1ziz d1ziza1 A:115-123,122-141,205-211,268-273,340-344
1zj0 d1zj0a1 A:115-123,122-141,205-211,268-273,340-344
1ga8 d1ga8a_ A:1-9,8-27,98-103,155-160,241-245
1zj1 d1zj1a1 A:115-123,122-141,205-211,268-273,340-344
1r81 d1r81a_ A:115-123,122-141,205-211,268-273,340-344
1r82 d1r82a_ A:115-123,122-141,205-211,268-273,340-344
1o7q d1o7qb_ B:128-136,135-155,219-225,282-287,353-357
1o7q d1o7qa_ A:128-136,135-155,219-225,282-287,353-357
1zjp d1zjpa1 A:115-123,122-141,205-211,268-273,340-344
1r7u d1r7ua_ A:115-123,122-141,205-211,268-273,340-344
1r7x d1r7xa_ A:115-123,122-141,205-211,268-273,340-344
1lz7 d1lz7a_ A:115-123,122-141,205-211,268-273,340-344
1r7y d1r7ya_ A:115-123,122-141,205-211,268-273,340-344
1g8o d1g8oa_ A:128-136,143-155,219-225,282-287,353-357
1r7t d1r7ta_ A:115-123,122-141,205-211,268-273,340-344
1zi1 d1zi1a1 A:115-123,122-141,205-211,268-273,340-344
1wsz d1wsza_ A:115-123,122-141,205-211,268-273,340-344
2a8w d2a8wa1 A:115-123,122-141,205-211,268-273,340-344
1lzi d1lzia_ A:115-123,122-141,205-211,268-273,340-344
1zhj d1zhja1 A:115-122,122-141,205-211,268-273,340-344
1wt2 d1wt2a_ A:115-123,122-141,205-211,268-273,340-344
1zjo d1zjoa1 A:115-123,122-141,205-211,268-273,340-344
1gx4 d1gx4b_ B:128-136,135-155,219-225,282-287,353-357
1gx4 d1gx4a_ A:128-136,135-155,219-225,282-287,353-357
1wt1 d1wt1a_ A:115-123,122-141,205-211,268-273,340-344
1xz6 d1xz6a_ A:115-123,122-141,205-211,268-273,340-344
1zi4 d1zi4a1 A:115-123,123-141,205-211,268-273,340-344
1zi3 d1zi3a1 A:115-123,123-141,205-211,268-273,340-344
1wt0 d1wt0a_ A:115-123,122-141,205-211,268-273,340-344
1zi5 d1zi5a1 A:115-122,123-141,205-211,268-273,340-344
1o0r d1o0ra_ A:180-189,191-201,246-252,292-297,340-345
1tvy d1tvya_ A:180-189,191-202,246-252,292-297,340-345
1oqm d1oqmd_ D:180-189,191-202,246-252,292-297,340-345
1tw5 d1tw5b_ B:180-189,191-202,246-252,292-297,340-345
1nf5 d1nf5d_ D:180-189,191-202,246-252,292-297,340-345
1fr8 d1fr8a_ A:180-189,191-202,246-252,292-297,340-345
2fyc d2fycd1 D:180-189,191-202,246-252,292-297,340-345
3. d.41.5 Molybdopterin synthase subunit MoaE
alpha/beta-Hammerhead core: beta-BETA-alpha-beta-BETA-beta-alpha; contains a beta-hammerhead motif similar to that in barrel-sandwich hybrids
1fma d1fmae_ E:2-10,55-75,76-85,92-102,123-131
1nvi d1nvie_ E:2-10,55-75,76-85,91-102,123-131
List of motif hits that are not present in SCOP but are found in PDB for pattern ID: 703 (enumeration index: query623) of S5
2fyb A:176-185,187-206,242-248,288-293,336-341
2pgv A:115-122,122-141,205-211,268-273,340-344
2riz A:115-123,122-141,205-211,268-273,340-344
3i0j A:115-122,122-141,205-211,268-273,340-344
3i0c A:115-122,122-141,205-211,268-273,340-344
2rj5 A:115-123,122-141,205-211,268-273,340-344
2d7i A:146-154,157-173,231-237,320-325,367-371
2p73 A:5-11,17-35,72-78,121-127,190-194
2p72 A:5-12,17-35,72-78,121-127,190-194
2p72 B:5-11,17-35,72-78,121-127,190-194
3i0e A:115-123,122-141,205-211,268-273,340-344
2vxl A:128-136,143-155,219-225,282-287,353-357
3i0f A:115-123,122-141,205-211,268-273,340-344
2c0n A:2-10,14-25,55-62,119-124,168-175
2wgz A:128-136,135-155,219-225,282-287,353-357
2wgz B:128-136,135-155,219-225,282-287,353-357
3ioi A:115-122,122-141,205-211,268-273,340-344
2o1g A:115-123,122-141,205-211,268-273,340-344
2o1f A:115-123,122-141,205-211,268-273,340-344
2vxm A:128-136,143-155,219-225,282-287,347-351
2rj1 A:115-122,122-141,205-211,268-273,340-344
2vs4 A:128-136,135-155,219-225,282-287,353-357
2vs4 B:128-136,135-155,219-225,282-287,353-357
2rj0 A:115-123,122-141,205-211,268-273,340-344
3i0d A:115-123,122-141,205-211,268-273,340-344
3ioj B:115-122,122-141,205-211,268-273,340-344
3ioj A:115-122,122-141,205-211,268-273,340-344
2fya A:176-185,187-206,242-248,288-293,336-341
2o1h A:115-123,122-141,205-211,268-273,340-344
2fy7 A:176-185,187-206,242-248,288-293,336-341
2p6w A:5-12,17-35,72-78,121-127,190-194
2q5w E:4-9,53-73,75-83,89-100,121-129
2omd A:8-13,59-79,80-89,96-106,127-135
2rj6 A:115-122,122-141,205-211,268-273,340-344
3i0l A:115-122,122-141,205-211,268-273,340-344
2pgy A:115-123,123-141,205-211,268-273,340-344
2w8s D:4-13,56-67,316-325,348-354,366-370
2w8s A:4-13,56-67,316-325,348-354,366-370
2vs3 A:128-136,135-155,219-225,282-287,353-357
2vs3 B:128-136,135-155,219-225,282-287,353-357
2rj4 A:115-123,122-141,205-211,268-273,340-344
2rj7 A:115-122,122-141,205-211,268-273,340-344
3i0i X:115-122,122-141,205-211,268-273,340-344
2qie H:3-8,52-72,74-82,87-99,120-126
2qie A:3-8,52-72,74-82,88-99,120-128
2qie E:3-8,52-72,74-82,88-99,120-128
2qie K:3-8,52-72,74-82,89-99,120-128
3rpf A:1-7,51-70,71-80,86-96,117-125
3rpf B:1-7,51-70,71-80,86-96,117-125
2nxv A:17-25,26-41,76-83,156-162,199-203
2nxv B:17-25,26-41,76-83,156-162,199-203
2qgi A:17-25,26-41,76-83,156-162,199-203
2qgi B:17-25,26-41,76-83,156-162,199-203
3i0k A:115-123,122-141,205-211,268-273,340-344
3i0g A:115-122,122-141,205-211,268-273,340-344
3i0h A:115-122,123-141,205-211,268-273,340-344
2ffu A:137-145,148-164,219-224,309-314,356-360