1. c.48.1 TK C-terminal domain-like TK C-terminal domain-like 3 layers: a/b/a; mixed beta-sheet of 5 strands, order 13245, strand 1 is antiparallel to the rest 1itz d1itzc3 C:550-557,564-570,571-588,590-597,664-675 1itz d1itzb3 B:550-557,564-570,571-588,590-597,664-675 1itz d1itza3 A:550-557,564-570,571-588,590-597,664-675 1qgd d1qgdb3 B:539-546,551-557,558-575,577-584,651-663 1qgd d1qgda3 A:539-546,551-557,558-575,577-584,651-663 2r8o d2r8oa3 A:539-546,551-557,558-575,577-584,651-663 2r8p d2r8pa3 A:539-546,551-557,558-575,577-584,651-663 2r5n d2r5nb3 B:539-546,551-557,558-575,577-584,651-664 2c3o d2c3ob3 B:260-266,270-276,276-294,296-303,371-386 2c3y d2c3yb3 B:260-266,270-276,276-294,296-303,371-386 1b0p d1b0pb3 B:260-266,270-276,276-294,296-303,371-386 2c3u d2c3ua3 A:260-266,270-276,276-294,296-303,371-386 2c3u d2c3ub3 B:260-266,270-276,276-294,296-303,371-386 1b0p d1b0pa3 A:260-266,270-276,276-294,296-303,371-386 2uza d2uzaa3 A:260-266,270-276,276-294,296-303,371-386 2c3y d2c3ya3 A:260-266,270-276,276-294,296-303,371-386 2c3o d2c3oa3 A:260-266,270-276,276-294,296-303,371-386 2c42 d2c42b3 B:260-266,270-276,276-294,297-303,371-386 2c3m d2c3mb3 B:260-266,270-276,279-294,296-303,371-386 2uza d2uzab3 B:260-266,270-276,279-294,296-303,371-386 2pda d2pdaa3 A:260-266,270-276,279-294,296-303,371-386 2pda d2pdab3 B:260-266,270-276,279-294,296-303,371-386 2c3p d2c3pb3 B:260-266,270-276,279-294,296-303,371-386 2c3m d2c3ma3 A:260-266,270-276,279-294,296-303,371-386 1umd d1umdb2 B:196-200,204-210,213-228,230-236,310-324 1umb d1umbb2 B:196-200,204-210,213-228,230-236,310-324 2c42 d2c42a3 A:260-266,270-276,279-294,296-303,371-386 1kek d1keka3 A:260-266,270-276,279-294,296-303,371-386 2r8p d2r8pb3 B:539-546,551-557,558-575,577-584,651-667 2r5n d2r5na3 A:539-546,551-557,558-575,577-584,651-667 1kek d1kekb3 B:260-266,270-276,279-294,296-303,371-386 1umc d1umcb2 B:196-200,204-210,213-228,230-236,310-324 2c3p d2c3pa3 A:260-266,270-276,279-294,296-303,371-386 2qtc d2qtca3 A:712-722,725-731,732-750,750-759,844-860 2g28 d2g28a3 A:712-722,725-731,732-750,750-759,844-860 1r9j d1r9jb3 B:535-542,546-552,552-571,571-578,641-657 2g25 d2g25b3 B:712-722,725-731,732-750,750-759,844-860 1l8a d1l8aa3 A:712-722,725-731,732-750,750-759,844-860 2g25 d2g25a3 A:712-722,725-731,732-750,750-759,844-860 2iea d2ieaa3 A:712-722,725-731,732-750,750-759,844-860 1l8a d1l8ab3 B:712-722,725-731,732-750,750-759,844-860 2qta d2qtab3 B:712-722,725-731,732-750,750-759,844-860 2qtc d2qtcb3 B:712-722,725-731,732-750,750-759,844-860 1v1m d1v1mb2 B:212-218,221-227,227-246,248-255,328-342 2iea d2ieab3 B:712-722,725-731,732-750,750-759,844-860 2qta d2qtaa3 A:712-722,725-731,732-750,750-759,844-860 2g28 d2g28b3 B:712-722,725-731,732-750,750-759,844-860 1olx d1olxb2 B:212-218,221-227,227-246,248-255,328-342 1v16 d1v16b2 B:212-218,221-227,227-246,248-255,328-342 1u5b d1u5bb2 B:212-218,221-227,227-246,248-255,328-342 1rp7 d1rp7b3 B:712-722,725-731,732-750,750-759,844-860 1w88 d1w88b2 B:194-200,203-209,209-227,229-236,310-324 1v11 d1v11b2 B:212-218,221-227,227-246,248-255,328-342 1x7x d1x7xb2 B:212-218,221-227,227-246,248-255,328-342 1rp7 d1rp7a3 A:712-722,725-731,732-750,750-759,844-860 1olu d1olub2 B:212-218,221-227,227-246,248-255,328-342 1x7y d1x7yb2 B:212-218,221-227,227-246,248-255,328-342 1wci d1wcib2 B:212-218,221-227,227-246,248-255,328-342 1v1r d1v1rb2 B:212-218,221-227,227-246,248-255,328-342 1ols d1olsb2 B:212-218,221-227,227-246,248-255,328-342 1x7w d1x7wb2 B:212-218,221-227,227-246,248-255,328-342 1x7z d1x7zb2 B:212-218,221-227,227-246,248-255,328-342 2bew d2bewb2 B:212-218,221-227,227-246,248-255,328-342 2g67 d2g67b3 B:712-720,723-731,732-750,750-759,844-860 2bff d2bffb2 B:212-218,221-227,227-246,248-255,328-342 1w85 d1w85f2 F:194-200,203-209,209-227,229-236,310-324 2bfc d2bfcb2 B:212-218,221-227,227-246,248-255,328-342 2bev d2bevb2 B:212-218,221-227,227-246,248-255,328-342 2bfd d2bfdb2 B:212-218,221-227,227-246,248-255,328-342 1w85 d1w85d2 D:194-200,203-209,209-227,229-236,310-324 1w85 d1w85b2 B:194-200,203-209,209-227,229-236,310-324 1w88 d1w88h2 H:194-200,203-209,209-227,229-236,310-324 1w85 d1w85h2 H:194-200,203-209,209-227,229-236,310-324 1r9j d1r9ja3 A:535-542,546-552,553-571,571-578,641-657 1dtw d1dtwb2 B:212-218,221-227,227-246,248-255,328-342 2r8o d2r8ob3 B:539-546,551-557,558-575,577-584,651-668 2g67 d2g67a3 A:712-720,723-731,732-750,750-759,844-860 1w88 d1w88f2 F:193-202,204-209,209-227,229-237,310-324 1w88 d1w88d2 D:193-202,204-209,209-227,229-237,310-324 2bp7 d2bp7b2 B:213-221,223-228,228-243,245-252,325-338 2bp7 d2bp7f2 F:213-219,222-228,228-243,245-252,325-339 2bp7 d2bp7d2 D:214-221,223-227,228-243,245-251,325-338 2. c.56.5 Zn-dependent exopeptidases core: mixed beta-sheet of 8 strands, order 12435867; strands 2, 6 & 7 are antiparallel to the rest ! Phosphorylase/hydrolase-like core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops 2gre d2grei2 I:49-58,63-70,187-205,209-218,327-345 1yw4 d1yw4a1 A:35-40,45-54,59-76,82-89,229-243 2gre d2grep2 P:49-58,63-70,186-205,209-218,327-344 2gre d2gref2 F:49-58,63-70,184-205,209-218,327-345 2gre d2greh2 H:49-58,63-70,187-205,209-218,327-344 2gre d2grem2 M:49-58,63-70,185-205,210-218,327-344 2gre d2greo2 O:49-58,63-70,185-205,209-218,327-344 2gre d2grej2 J:49-58,63-70,185-205,209-218,327-344 2gre d2greg2 G:49-58,63-70,186-205,209-218,327-344 2gre d2grel2 L:49-58,63-71,185-205,209-219,327-345 1uwy d1uwya2 A:37-46,57-64,69-87,100-107,283-295 1z2l d1z2la1 A:62-71,76-83,93-114,117-126,391-413 1yw6 d1yw6a1 A:32-39,43-51,56-73,78-86,222-238 2gre d2gred2 D:49-58,63-71,185-205,209-219,327-344 2imo d2imob1 B:62-71,76-85,93-114,117-127,391-412 2gre d2gree2 E:49-58,63-71,186-205,209-219,327-344 1h8l d1h8la2 A:45-54,65-72,77-95,108-115,291-304 1z2l d1z2lb1 B:62-71,77-85,93-114,117-127,391-412 1qmu d1qmua2 A:45-54,65-72,77-95,108-115,291-304 2q43 d2q43a1 A:72-80,84-93,117-136,141-150,383-407 2gre d2grek2 K:49-58,62-71,186-205,209-219,327-344 2gre d2grec2 C:49-58,62-71,186-205,209-219,327-344 2gre d2gren2 N:49-58,62-71,186-205,209-219,327-344 2gre d2grea2 A:49-58,62-71,186-205,209-219,327-344 1y7e d1y7ea2 A:73-82,89-96,253-269,275-284,441-458 1xmb d1xmba1 A:93-101,105-114,138-157,162-171,404-428 1ylo d1ylod2 D:43-50,54-64,164-184,187-197,315-334 1ylo d1ylof2 F:43-50,54-64,164-184,187-197,315-334 1ylo d1ylob2 B:43-50,54-64,164-184,187-197,315-334 1ylo d1yloa2 A:43-50,54-64,164-184,187-197,315-334 1vhe d1vhea2 A:48-56,60-70,180-201,203-213,332-351 1ylo d1yloc2 C:43-50,54-64,164-184,187-197,315-334 1ylo d1yloe2 E:43-50,54-64,164-184,187-197,315-334 1vho d1vhoa2 A:46-55,58-66,168-189,191-200,314-332 1yw6 d1yw6b1 B:32-39,42-51,56-73,78-87,223-238 2g9d d2g9da1 A:40-47,54-61,66-83,89-96,230-247 2bco d2bcoa1 A:40-47,54-61,66-83,89-96,230-247 2bco d2bcob1 B:40-47,54-61,66-83,89-96,230-247 2gre d2greb2 B:49-58,62-70,186-205,209-218,327-344 1obr d1obra_ A:41-50,60-68,72-90,103-110,301-315 1ysj d1ysja1 A:54-61,65-75,99-118,122-132,357-379 1xfo d1xfoa2 A:50-59,59-69,180-198,201-210,330-351 1xfo d1xfoc2 C:50-59,59-70,180-198,201-211,330-348 1zg7 d1zg7c1 C:44-54,60-67,72-90,103-110,282-307 1ysj d1ysjb1 B:54-61,65-75,99-118,122-132,357-379 1r43 d1r43a1 A:94-103,107-114,124-144,148-157,428-455 1lfw d1lfwa1 A:69-76,80-89,119-138,143-152,446-468 1r3n d1r3nd1 D:94-103,107-114,124-144,148-157,428-455 1r3n d1r3nb1 B:94-103,107-114,124-144,148-157,428-455 1r3n d1r3na1 A:94-103,107-114,124-144,148-157,428-455 1r3n d1r3nf1 F:94-103,107-114,124-144,148-157,428-455 1kwm d1kwma1 A:44-54,60-67,72-90,103-110,282-308 1r3n d1r3nh1 H:94-103,107-114,124-144,148-157,428-455 1r3n d1r3nc1 C:94-103,107-114,124-144,148-157,428-455 1r3n d1r3ne1 E:94-103,107-114,124-144,148-157,428-455 1ee3 d1ee3p_ P:44-53,60-67,72-90,103-110,282-305 1r43 d1r43b1 B:94-103,108-114,124-144,148-157,428-455 1r3n d1r3ng1 G:94-103,107-114,124-144,148-157,428-455 1zlh d1zlha1 A:44-53,60-67,72-90,103-110,282-305 2abz d2abzb1 B:44-53,60-67,72-90,103-110,282-305 1ell d1ellp_ P:44-53,60-67,72-90,103-110,282-305 1elm d1elmp_ P:44-53,60-67,72-90,103-110,282-305 2imo d2imoa1 A:62-71,76-83,91-114,117-126,391-413 2abz d2abza1 A:44-53,60-67,72-90,103-110,282-305 2prq d2prqa1 A:76-85,90-97,117-136,140-149,269-290 2dea d2deaa1 A:76-85,90-97,117-136,140-149,269-290 2piz d2pizc1 C:44-53,60-67,72-90,103-110,282-308 1vix d1vixb1 B:56-66,72-79,138-159,163-171,387-408 2anp d2anpa1 A:76-85,90-97,117-136,140-149,269-290 1lok d1loka_ A:76-85,90-97,117-136,140-149,269-290 1rtq d1rtqa_ A:76-85,90-97,117-136,140-149,269-290 2pj5 d2pj5c1 C:44-53,60-67,72-90,103-110,282-308 1txr d1txra_ A:76-85,90-97,117-136,140-149,269-290 2pja d2pjac1 C:44-53,60-67,72-90,103-110,282-308 1xfo d1xfod2 D:50-59,59-69,180-197,201-210,330-351 2iq6 d2iq6a1 A:76-85,90-97,117-136,140-149,269-290 2pj2 d2pj2c1 C:44-53,60-67,72-90,103-110,282-308 1nsa d1nsaa1 A:44-53,60-67,72-90,103-110,283-308 1lcp d1lcpb2 B:227-236,244-250,274-291,294-306,471-484 1ft7 d1ft7a_ A:76-85,90-97,117-136,140-149,269-290 1zg8 d1zg8b1 B:44-53,60-67,72-90,103-110,282-308 2pj6 d2pj6a1 A:44-53,60-67,72-90,103-110,282-308 2pj1 d2pj1b1 B:44-53,60-67,72-90,103-110,282-308 1zg9 d1zg9b1 B:44-53,60-67,72-90,103-110,282-308 2fvg d2fvga2 A:40-49,53-61,164-181,185-194,314-332 2piz d2pizb1 B:44-53,60-67,72-90,103-110,282-308 1vix d1vixa1 A:56-66,72-79,138-159,163-171,387-408 1xfo d1xfob2 B:50-59,59-69,180-197,201-210,330-351 2pjb d2pjbb1 B:44-53,60-67,72-90,103-110,282-308 2pj5 d2pj5b1 B:44-53,60-67,72-90,103-110,282-308 1lcp d1lcpa2 A:227-236,244-250,274-291,294-306,471-484 2pj0 d2pj0c1 C:44-53,60-67,72-90,103-110,282-308 2pj4 d2pj4a1 A:44-53,60-67,72-90,103-110,282-308 1zg7 d1zg7b1 B:44-53,60-67,72-90,103-110,282-308 2nyq d2nyqa1 A:76-85,90-97,117-136,140-149,269-290 2pj0 d2pj0b1 B:44-53,60-67,72-90,103-110,282-308 2ewb d2ewba1 A:227-236,244-250,271-291,294-306,471-486 2pj3 d2pj3b1 B:44-53,60-67,72-90,103-110,282-308 2piy d2piyc1 C:44-53,60-67,72-90,103-110,282-308 1zg9 d1zg9a1 A:44-53,60-67,72-90,103-110,282-308 2pjc d2pjcb1 B:44-53,60-67,72-90,103-110,282-308 2pj8 d2pj8b1 B:44-53,60-67,72-90,103-110,282-308 1z5r d1z5rb1 B:44-53,60-67,72-90,103-110,282-308 1cpx d1cpxa_ A:44-53,60-67,72-90,103-110,282-306 2pjc d2pjcc1 C:44-53,60-67,72-90,103-110,282-308 2pj3 d2pj3c1 C:44-53,60-67,72-90,103-110,282-308 2pja d2pjaa1 A:44-53,60-67,72-90,103-110,282-308 2pja d2pjab1 B:44-53,60-67,72-90,103-110,282-308 2pj8 d2pj8c1 C:44-53,60-67,72-90,103-110,282-308 2pjc d2pjca1 A:44-53,60-67,72-90,103-110,282-308 2piy d2piyb1 B:44-53,60-67,72-90,103-110,282-308 2pj7 d2pj7c1 C:44-53,60-67,72-90,103-110,282-308 2pj5 d2pj5a1 A:44-53,60-67,72-90,103-110,282-308 2pj1 d2pj1c1 C:44-53,60-67,72-90,103-110,282-308 1zg9 d1zg9c1 C:44-53,60-67,72-90,103-110,282-307 1bav d1bavd_ D:44-53,60-67,72-90,103-110,282-307 2pj0 d2pj0a1 A:44-53,60-67,72-90,103-110,282-308 1z5r d1z5ra1 A:44-53,60-67,72-90,103-110,282-308 2pj3 d2pj3a1 A:44-53,60-67,72-90,103-110,282-308 1bpn d1bpna1 A:227-236,243-256,274-291,294-306,471-484 2pj4 d2pj4b1 B:44-53,60-67,72-90,103-110,282-308 1zg8 d1zg8a1 A:44-53,60-67,72-90,103-110,282-308 2pj9 d2pj9a1 A:44-53,60-67,72-90,103-110,282-308 2pjb d2pjbc1 C:44-53,60-67,72-90,103-110,282-308 1arm d1arma_ A:44-53,60-67,72-90,103-110,282-307 2pjb d2pjba1 A:44-53,60-67,72-90,103-110,282-308 2pj1 d2pj1a1 A:44-53,60-67,72-90,103-110,282-308 1z5r d1z5rc1 C:44-53,60-67,72-90,103-110,282-308 2pj2 d2pj2b1 B:44-53,60-67,72-90,103-110,282-308 2pj7 d2pj7b1 B:44-53,60-67,72-90,103-110,282-308 1arl d1arla_ A:44-53,60-67,72-90,103-110,282-307 1zg7 d1zg7a1 A:44-53,60-67,72-90,103-110,282-308 2piy d2piya1 A:44-53,60-67,72-90,103-110,282-308 2pj2 d2pj2a1 A:44-53,60-67,72-90,103-110,282-308 1bpm d1bpma1 A:227-236,243-256,271-291,294-306,471-484 2rfh d2rfha1 A:44-53,60-67,72-90,103-110,282-307 2pj8 d2pj8a1 A:44-53,60-67,72-90,103-110,282-308 2pj7 d2pj7a1 A:44-53,60-67,72-90,103-110,282-308 2boa d2boaa1 A:1044-1053,1060-1067,1072-1090,1103-1110,1282-1308 2ctc d2ctca_ A:44-53,60-67,72-90,103-110,282-307 1m4l d1m4la_ A:44-53,60-67,72-90,103-110,282-307 1iy7 d1iy7a_ A:44-53,60-67,72-90,103-110,282-307 2c1c d2c1cb1 B:44-53,60-67,72-89,103-110,282-309 1zli d1zlia1 A:44-53,60-67,72-90,103-110,282-308 1yme d1ymea_ A:44-53,60-67,72-90,103-110,282-307 2jew d2jewa1 A:44-53,60-67,72-90,103-110,282-308 3cpa d3cpaa_ A:44-53,60-67,72-90,103-110,282-307 2boa d2boab1 B:1044-1053,1060-1067,1072-1090,1103-1110,1282-1308 1hdu d1hdud_ D:44-53,60-67,72-90,103-110,282-307 1hee d1heed_ D:44-53,60-67,72-90,103-110,282-307 1hee d1heeb_ B:44-53,60-67,72-90,103-110,282-307 1hdu d1hdub_ B:44-53,60-67,72-90,103-110,282-307 1bav d1bava_ A:44-53,60-67,72-90,103-110,282-307 2ctb d2ctba_ A:44-53,60-67,72-90,103-110,282-307 1zg8 d1zg8c1 C:44-53,60-67,72-90,103-110,282-308 1fno d1fnoa4 A:56-66,72-80,138-158,163-172,387-408 4cpa d4cpab_ B:44-53,60-67,72-90,103-110,282-307 4cpa d4cpaa_ A:44-53,60-67,72-90,103-110,282-307 1cbx d1cbxa_ A:44-53,60-67,72-90,103-110,282-307 1cps d1cpsa_ A:44-53,60-67,72-90,103-110,282-307 5cpa d5cpaa_ A:44-53,60-67,72-90,103-110,282-307 2piz d2piza1 A:44-53,60-67,72-90,103-110,282-308 1bav d1bavb_ B:44-53,60-67,72-90,103-110,282-307 2q7s d2q7sa1 A:12-18,24-30,61-68,69-75,264-289 1f57 d1f57a_ A:44-53,60-67,72-90,103-110,282-307 1hee d1heee_ E:44-53,60-67,72-90,103-110,282-307 1hdu d1hdue_ E:44-53,60-67,72-90,103-110,282-307 1hee d1heea_ A:44-53,60-67,72-90,103-110,282-307 1hdu d1hdua_ A:44-53,60-67,72-90,103-110,282-307 1hdq d1hdqa_ A:44-53,60-67,72-90,103-110,282-307 2q7s d2q7sb1 B:12-18,24-30,61-68,69-75,264-289 1bav d1bavc_ C:44-53,60-67,72-90,103-110,282-307 1xry d1xrya1 A:76-85,90-99,117-136,140-150,269-290 7cpa d7cpaa_ A:44-53,60-67,72-90,103-110,282-307 1amp d1ampa_ A:76-85,90-99,117-136,140-150,269-290 6cpa d6cpaa_ A:44-53,60-67,72-90,103-110,282-307 2pcu d2pcua1 A:44-53,60-67,72-90,103-110,282-308 1kwm d1kwmb1 B:44-53,60-67,72-90,103-110,282-308 1pyt d1pytb_ B:44-53,60-67,72-90,103-110,282-308 8cpa d8cpaa_ A:44-53,60-67,72-90,103-110,282-307 2c1c d2c1ca1 A:44-53,60-67,72-89,103-110,282-309 1cp6 d1cp6a_ A:76-85,90-99,117-136,140-150,269-290 1aye d1ayea1 A:44-53,60-67,72-90,103-110,282-308 2bo9 d2bo9c1 C:44-53,60-67,72-90,103-110,282-308 1y0y d1y0ya2 A:50-59,59-70,180-197,201-211,330-351 2bo9 d2bo9a1 A:44-53,60-67,72-90,103-110,282-308 2j9a d2j9aa1 A:227-236,243-256,274-291,294-306,471-485 1y0r d1y0ra2 A:50-60,60-70,180-197,201-211,330-351 1dtd d1dtda_ A:400-409,415-422,427-445,458-465,638-664 1igb d1igba_ A:76-85,90-97,114-136,140-149,269-290 1cg2 d1cg2d1 D:92-102,102-113,141-160,163-173,394-414 1cg2 d1cg2a1 A:92-102,105-114,141-160,163-174,394-414 1cg2 d1cg2b1 B:92-102,105-114,141-160,163-174,394-414 1vgy d1vgyb1 B:48-57,61-70,101-121,125-134,357-376 1gyt d1gytb2 B:247-257,264-276,294-311,313-326,483-498 1vgy d1vgya1 A:48-57,61-70,101-121,125-134,357-376 1gyt d1gyth2 H:247-257,264-276,294-311,313-326,483-498 1gyt d1gytf2 F:247-257,264-276,294-311,313-326,483-498 1gyt d1gytl2 L:247-257,264-276,294-311,313-326,483-498 1gyt d1gytd2 D:247-257,264-276,294-311,313-326,483-498 1gyt d1gytg2 G:247-257,264-276,294-311,313-326,483-498 1gyt d1gyta2 A:247-257,264-276,294-311,313-326,483-498 1gyt d1gyti2 I:247-257,264-276,294-311,313-326,483-498 1gyt d1gyte2 E:247-257,264-276,294-311,313-326,483-498 1cg2 d1cg2c1 C:92-102,102-114,141-160,163-174,394-414 1gyt d1gytk2 K:247-257,264-276,294-311,313-326,483-498 1jqg d1jqga1 A:44-53,60-67,72-90,103-110,282-308 1gyt d1gytc2 C:247-257,264-276,294-311,313-326,483-498 1lam d1lama1 A:227-236,244-256,274-291,294-306,471-484 1gyt d1gytj2 J:247-257,264-276,294-311,313-326,483-498 1lap d1lapa1 A:227-236,244-256,274-291,294-306,469-484 1xjo d1xjoa_ A:61-71,78-86,97-116,121-129,257-277 1bll d1blle2 E:227-236,244-256,272-291,294-306,471-484 1lan d1lana2 A:227-236,244-256,274-291,294-306,471-484 1f2o d1f2oa_ A:61-71,78-86,97-116,121-129,257-277 1tkh d1tkha1 A:61-71,78-86,94-116,121-129,257-277 1cp7 d1cp7a_ A:61-71,78-86,94-116,121-129,257-277 1tf9 d1tf9a1 A:61-71,78-86,97-116,121-129,257-277 1qq9 d1qq9a_ A:61-71,78-86,94-116,121-129,257-277 1tkj d1tkja1 A:61-71,78-86,97-116,121-129,257-277 1tf8 d1tf8a1 A:61-71,78-86,97-116,121-129,257-277 1tkf d1tkfa1 A:61-71,78-86,94-116,121-129,257-277 1xbu d1xbua1 A:61-71,78-86,94-116,121-129,257-277 1de4 d1de4f3 F:378-396,401-410,415-441,445-455,582-604 1de4 d1de4i3 I:378-396,401-410,415-441,445-455,582-604 1de4 d1de4c3 C:378-396,401-410,415-441,445-455,582-604 1f2p d1f2pa_ A:61-71,78-86,94-116,121-129,257-277 2c6c d2c6ca3 A:347-365,370-379,384-409,413-423,570-590 2jbj d2jbja3 A:347-365,370-379,384-409,413-423,570-590 1cx8 d1cx8h3 H:378-396,401-410,415-441,445-455,582-605 2jbk d2jbka3 A:347-365,370-379,384-409,413-423,570-590 2nsu d2nsub3 B:378-396,401-410,415-441,445-455,582-605 1cx8 d1cx8b3 B:378-396,401-410,415-441,445-455,582-605 2pvv d2pvva3 A:347-365,370-379,384-409,413-423,570-590 2or4 d2or4a3 A:347-365,370-379,384-409,413-423,570-590 3bhx d3bhxa3 A:347-365,370-379,384-409,413-423,570-590 2c6g d2c6ga3 A:347-365,370-379,384-409,413-423,570-590 2oot d2oota3 A:347-365,370-379,384-409,413-423,570-590 2c6p d2c6pa3 A:347-365,370-379,384-409,413-423,570-590 3bi1 d3bi1a3 A:347-365,370-379,384-409,413-423,570-590 2pvw d2pvwa3 A:347-365,370-379,384-409,413-423,570-590 2cij d2cija3 A:347-365,370-379,384-409,413-423,570-590 3bi0 d3bi0a3 A:347-365,370-379,384-409,413-423,570-590 2afo d2afoa1 A:116-127,132-141,159-175,190-199,340-360 1z8l d1z8lc3 C:347-365,370-378,384-409,413-422,570-590 1z8l d1z8lb3 B:347-365,370-378,384-409,413-422,570-590 1z8l d1z8ld3 D:347-365,370-378,384-409,413-422,570-590 1z8l d1z8la3 A:347-365,370-378,384-409,413-422,570-590 2afu d2afua1 A:116-127,132-141,159-175,190-199,340-360 2afo d2afob1 B:115-127,132-142,159-175,190-200,340-360 2afx d2afxb1 B:116-127,132-142,159-175,190-200,340-360 2afz d2afzb1 B:116-127,132-142,159-175,190-200,340-360 2afw d2afwb1 B:116-127,132-142,159-175,190-200,340-360 2afm d2afmb1 B:116-127,132-142,159-175,190-200,340-360 2zeh d2zehb1 B:116-127,132-142,159-175,190-200,340-360 2afx d2afxa1 A:116-127,132-142,159-175,190-200,340-360 2afs d2afsb1 B:115-127,132-142,159-175,190-200,340-360 2afs d2afsa1 A:116-127,132-142,159-175,190-200,340-360 2zeh d2zeha1 A:116-127,132-142,159-175,190-200,340-360 2afw d2afwa1 A:116-127,132-142,159-175,190-200,340-360 2afm d2afma1 A:116-127,132-142,159-175,190-200,340-360 2afz d2afza1 A:116-127,132-142,159-175,190-200,340-360 2afu d2afub1 B:115-127,132-142,159-175,190-200,340-360 1cx8 d1cx8g3 G:378-394,401-410,415-441,446-455,582-605 1cx8 d1cx8d3 D:378-394,401-410,415-441,446-455,582-605 1cx8 d1cx8e3 E:378-394,401-410,415-441,446-455,582-605 1cx8 d1cx8f3 F:378-394,401-410,415-441,446-455,582-605 2nsu d2nsua3 A:378-394,401-410,415-441,446-455,582-605 1cx8 d1cx8a3 A:378-394,401-410,415-441,446-455,582-605 1cx8 d1cx8c3 C:378-394,401-410,415-441,446-455,582-605 3. c.119.1 DAK1/DegV-like domain folds and architecture show some similarity to the tubulin-like GTPases; the nucleotide-binding sites of the Dihydroxyacetone kinase and tubulin families are different ! DAK1/DegV-like 2 different domains; d1: [core: 3 layers, a/b/a; parallel sheet of 5 strands, order: 2134]; D2: [2 layers, a/b; mixed sheet of 6 strands, order 321645; strands 2 and 6 are antiparallel to the rest] 1uoe d1uoea_ A:43-48,55-64,66-74,80-86,159-177 1uoe d1uoeb_ B:43-48,55-64,66-74,80-86,159-177 1uod d1uoda_ A:43-48,55-64,66-74,80-86,159-177 1oi2 d1oi2b_ B:43-48,55-64,66-74,80-86,159-177 1oi3 d1oi3b_ B:43-48,55-65,66-74,80-87,159-177 1uod d1uodb_ B:43-48,55-65,66-74,80-87,159-177 1oi3 d1oi3a_ A:43-48,55-65,66-74,80-87,159-177 1oi2 d1oi2a_ A:43-48,55-65,66-74,80-87,159-177 1un8 d1un8b4 B:39-44,51-56,61-69,75-79,151-169 1un8 d1un8a4 A:39-44,51-56,61-69,75-79,151-169 4. d.154.1 DmpA/ArgJ-like convergent similarity to the Ntn amidohydrolases ! DmpA/ArgJ-like duplication of beta(3)-alpha-beta-alpha motif; 4 layers: alpha/beta/beta/alpha 1vz7 d1vz7a_ A:38-45,181-190,193-212,221-230,236-259 1vz7 d1vz7c_ C:38-45,181-190,193-212,221-230,236-259 1vz8 d1vz8d_ D:38-45,181-190,193-212,221-230,236-259 1vz6 d1vz6b_ B:38-45,181-190,193-212,221-230,236-259 1vz6 d1vz6a_ A:38-45,181-190,193-212,221-230,236-259 1vz8 d1vz8a_ A:38-45,181-190,193-212,221-230,236-259 1vz7 d1vz7b_ B:38-45,181-190,193-212,221-230,236-259 1vz8 d1vz8b_ B:38-45,181-190,193-212,221-230,236-259 1vz7 d1vz7d_ D:38-45,181-190,193-212,221-230,236-259 1vz8 d1vz8c_ C:38-45,181-190,193-212,221-230,236-259 1b65 d1b65e_ E:73-84,250-258,262-281,288-297,317-343 1b65 d1b65b_ B:73-84,250-258,262-281,288-297,317-343 1b65 d1b65f_ F:73-84,250-258,262-281,288-297,317-343 1b65 d1b65c_ C:73-84,250-258,262-281,288-297,317-343 1b65 d1b65d_ D:73-84,250-258,262-281,288-297,317-343 1b65 d1b65a_ A:73-84,250-258,262-281,288-297,317-343 8. c.23.4 Succinyl-CoA synthetase domains Flavodoxin-like 3 layers, a/b/a; parallel beta-sheet of 5 strand, order 21345 2scu d2scua2 A:124-129,144-152,153-168,172-177,275-286 2scu d2scud2 D:124-129,144-152,153-168,172-177,275-286 2nu9 d2nu9a2 A:124-129,146-152,153-168,172-177,275-286 2nu9 d2nu9d2 D:124-129,146-152,153-168,172-177,275-286 2nu9 d2nu9h2 H:124-129,146-152,153-168,172-177,275-286 2nu9 d2nu9f2 F:124-129,146-152,153-168,172-177,275-286 1cqj d1cqja2 A:124-129,146-152,153-168,172-177,275-286 1cqj d1cqjd2 D:124-129,146-152,153-168,172-177,275-286 1cqi d1cqib1 B:249-257,258-264,265-280,284-290,373-385 2nua d2nuaa2 A:124-129,146-152,153-168,172-177,275-287 2nua d2nuad2 D:124-129,146-152,153-168,172-177,275-287 2nu6 d2nu6a2 A:124-129,146-152,153-168,172-177,275-287 2nu6 d2nu6d2 D:124-129,146-152,153-168,172-177,275-287 2scu d2scub1 B:249-255,258-264,265-280,284-290,373-385 2nu8 d2nu8a2 A:124-129,146-152,153-168,172-177,275-287 2nu8 d2nu8d2 D:124-129,146-152,153-168,172-177,275-287 2nu7 d2nu7a2 A:124-129,144-152,153-168,172-177,275-287 2nu9 d2nu9e1 E:249-255,258-264,265-280,284-290,373-385 2nu9 d2nu9b1 B:249-255,258-264,265-280,284-290,373-385 2nu9 d2nu9i1 I:249-255,258-264,265-280,284-290,373-385 2nu7 d2nu7d2 D:124-129,144-152,153-168,172-177,275-287 2nu9 d2nu9g1 G:249-255,258-264,265-280,284-290,373-385 1cqi d1cqia2 A:125-129,146-152,153-168,172-177,275-286 1cqi d1cqid2 D:125-129,146-152,153-168,172-177,275-286 1cqi d1cqie1 E:249-255,258-264,265-280,284-290,373-385 1jkj d1jkja2 A:124-129,146-152,153-168,172-177,275-287 1jkj d1jkjd2 D:124-129,146-152,153-168,172-177,275-287 1cqj d1cqjb1 B:249-255,258-264,265-280,284-290,373-385 1cqj d1cqje1 E:249-255,258-264,265-280,284-290,373-385 2nua d2nuae1 E:250-255,258-264,265-280,284-289,373-385 2scu d2scue1 E:249-255,258-264,265-280,284-290,373-385 1jll d1jlld2 D:125-129,146-152,153-168,172-177,275-287 1jkj d1jkje1 E:250-255,258-265,265-280,284-290,373-385 1jll d1jlla2 A:125-129,146-152,153-168,172-177,275-287 2nu7 d2nu7e1 E:250-255,258-265,265-280,284-290,373-385 2nu8 d2nu8e1 E:250-255,258-265,265-280,284-290,373-385 1oi7 d1oi7a2 A:122-129,146-152,153-168,172-178,275-288 2nu6 d2nu6e1 E:250-255,258-265,265-280,284-290,373-385 1jll d1jlle1 E:250-257,258-265,265-280,284-290,373-385 1jkj d1jkjb1 B:249-255,258-264,265-280,284-290,373-386 2nua d2nuab1 B:250-255,258-264,265-280,284-289,373-386 2fp4 d2fp4b1 B:257-262,265-272,272-287,291-297,380-393 2fpp d2fppb1 B:257-262,265-272,272-287,291-297,380-393 2fpg d2fpgb1 B:257-262,265-272,272-287,291-297,380-393 1jll d1jllb1 B:250-257,258-265,265-280,284-290,373-386 2nu6 d2nu6b1 B:250-255,258-265,265-280,284-290,373-386 2nu7 d2nu7b1 B:250-255,258-265,265-280,284-290,373-386 2nu8 d2nu8b1 B:250-255,258-265,265-280,284-290,373-386 1scu d1scub1 B:249-257,258-264,265-280,284-290,373-388 2fpi d2fpib1 B:257-262,265-272,272-287,291-297,380-393 2csu d2csub2 B:131-136,151-157,158-173,177-182,275-289 1scu d1scud2 D:124-129,146-152,153-168,172-177,278-288 2csu d2csua2 A:131-136,151-157,158-173,176-182,275-289 1euc d1eucb1 B:257-262,265-272,272-287,291-297,380-393 2fpp d2fppa2 A:131-138,155-161,162-177,181-188,288-304 1scu d1scue1 E:249-255,258-264,265-280,284-290,373-388 1eud d1eudb1 B:257-262,265-272,272-287,291-297,380-393 1scu d1scua2 A:124-129,146-153,153-168,172-179,275-288 1eud d1euda2 A:133-138,153-162,162-177,181-188,288-304 2fp4 d2fp4a2 A:133-138,155-161,162-177,179-186,288-304 2fpg d2fpga2 A:133-138,155-161,162-177,181-186,288-304 1euc d1euca2 A:133-138,153-161,162-177,181-186,288-304 2fpi d2fpia2 A:133-138,155-161,162-177,181-186,288-304 12. d.133.1 Molybdenum cofactor-binding domain duplication: consists of 4 structural repeats arranged in 2 lobes ! contains one left-hand beta-alpha-beta unit per lobe ! Molybdenum cofactor-binding domain beta(2)-alpha-beta-alpha-beta; 2 layers: a/b; mixed sheet: order 1243: crossing loops 1t3q d1t3qb2 B:164-174,310-325,332-344,351-362,372-394 1t3q d1t3qe2 E:164-174,310-325,332-344,351-363,372-394 3b9j d3b9jc2 C:711-717,854-869,873-887,892-903,913-935 1sb3 d1sb3d2 D:154-164,300-315,319-336,338-350,359-381 1sb3 d1sb3a2 A:154-164,300-315,319-336,338-350,359-381 1sij d1sija4 A:330-340,475-490,494-506,514-525,534-556 1vlb d1vlba4 A:330-340,475-490,494-506,514-525,534-556 1dgj d1dgja4 A:330-340,477-492,496-508,515-527,536-558 1jrp d1jrpf2 F:143-149,284-299,303-317,322-334,344-365 1jrp d1jrph2 H:143-149,284-299,303-317,322-334,344-365 1jro d1jroh2 H:143-149,284-299,303-317,322-334,344-365 1fo4 d1fo4a5 A:711-717,854-869,871-887,892-903,914-935 1vdv d1vdva5 A:711-717,854-869,871-887,892-903,914-935 1fo4 d1fo4b5 B:711-717,854-869,871-887,892-903,914-935 1vdv d1vdvb5 B:711-717,854-869,871-887,892-903,914-935 1jrp d1jrpb2 B:143-149,284-299,303-317,322-334,343-365 1fiq d1fiqc2 C:711-717,854-869,871-887,892-903,914-935 1jro d1jrof2 F:143-149,284-299,303-317,322-334,343-365 1jro d1jrod2 D:143-149,284-299,303-317,322-334,343-365 1jro d1jrob2 B:143-149,284-299,303-317,322-334,343-365 1jrp d1jrpd2 D:143-149,284-299,303-317,322-334,343-365 1n5x d1n5xa5 A:711-717,854-869,871-887,892-904,914-935 1n5x d1n5xb5 B:711-717,854-869,871-887,892-904,914-935 1rm6 d1rm6a2 A:154-164,300-315,317-336,338-350,359-381 1v97 d1v97b5 B:711-717,854-869,871-887,892-903,913-935 1v97 d1v97a5 A:711-717,854-869,871-887,892-903,913-935 1rm6 d1rm6d2 D:154-164,300-315,317-336,338-350,359-381