2. d.161.1 ADC synthase the active site is formed by additional structures inserted into the core structure ! ADC synthase duplication: contains four repeats of alpha-beta(2)-beta motif arranged in a 4 layer core structure: alpha/beta/beta/alpha; orthogonally packed beta-sheets 1k0e d1k0eb_ B:16-28,29-37,238-248,249-257,409-416 1k0e d1k0ea_ A:16-28,29-37,238-248,249-257,409-416 2g5f d2g5fb1 B:25-39,44-51,234-242,243-251,405-411 1qdl d1qdla_ A:11-24,24-32,207-215,216-223,377-383 3bzm d3bzma1 A:39-48,50-59,220-229,231-239,386-393 2g5f d2g5fa1 A:25-39,44-51,234-242,243-251,405-411 3bzn d3bzna1 A:39-48,50-59,220-229,231-239,386-393 2fn1 d2fn1a1 A:13-28,31-37,222-230,231-239,390-397 1i7s d1i7sa_ A:20-30,33-41,291-299,300-307,469-475 2g5f d2g5fc1 C:25-42,44-51,234-242,243-251,404-411 1k0g d1k0ga_ A:16-26,29-37,238-248,249-257,409-416 2fn0 d2fn0a1 A:13-28,31-37,222-230,231-239,390-397 2eua d2euab1 B:39-48,50-59,220-229,231-239,386-393 1i7s d1i7sc_ C:20-30,34-41,291-299,300-307,469-475 2fn1 d2fn1b1 B:12-28,31-37,222-230,231-239,390-397 2eua d2euaa1 A:39-48,50-59,220-229,231-239,386-393 1k0g d1k0gb_ B:16-26,30-37,238-248,249-257,409-416 2fn0 d2fn0b1 B:12-28,31-37,222-230,231-239,390-397 2i6y d2i6ya1 A:25-42,44-51,234-242,243-250,405-411 2g5f d2g5fd1 D:25-42,44-51,235-242,243-251,404-411 1i1q d1i1qa_ A:20-30,33-42,291-299,300-307,469-475 1i7q d1i7qa_ A:20-30,33-44,291-299,300-308,468-475 1i7q d1i7qc_ C:20-30,34-44,291-299,300-308,468-475 5. c.111.1 Activating enzymes of the ubiquitin-like proteins transfer adenylyl group to the C-terminal carboxyl group of the ubiquitin and MoaD/ThiS-related proteins ! the ATP nucleotide-binding site is similar to that of the NAD-binding Rossmann-folds ! Activating enzymes of the ubiquitin-like proteins 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 32145678; strands 6 and 8 are antiparallel to the rest 3dbh d3dbhg1 G:132-147,149-157,158-166,518-524,527-533 1jwb d1jwbb_ B:131-146,148-156,157-165,221-229,230-238 1jw9 d1jw9b_ B:131-146,148-156,157-165,221-229,230-238 1tt5 d1tt5a_ A:132-147,149-157,158-166,518-525,526-533 3dbl d3dblg1 G:132-147,149-157,158-166,518-525,526-533 1yov d1yovc1 C:132-147,149-157,158-166,518-525,526-533 1r4n d1r4ng_ G:132-147,149-157,158-166,518-525,526-533 1r4n d1r4ne_ E:132-147,149-157,158-166,518-525,526-533 1r4n d1r4nc_ C:132-147,149-157,158-166,518-525,526-533 1r4m d1r4me_ E:132-147,149-157,158-166,518-525,526-533 1r4m d1r4mg_ G:132-147,149-157,158-166,518-525,526-533 1yov d1yova1 A:132-147,149-157,158-166,518-525,526-533 1r4n d1r4na_ A:132-147,149-157,158-166,518-525,526-533 1tt5 d1tt5c_ C:132-147,149-157,158-166,518-525,526-533 1r4m d1r4mc_ C:132-147,149-157,158-166,518-525,526-533 1r4m d1r4ma_ A:132-147,149-157,158-166,518-525,526-533 3dbl d3dbla1 A:132-147,149-157,158-166,518-525,526-533 3dbl d3dble1 E:132-147,149-157,158-166,518-525,526-533 3dbh d3dbhe1 E:132-147,149-157,158-166,518-525,526-533 3dbh d3dbha1 A:132-147,149-157,158-166,518-525,526-533 3dbr d3dbra1 A:132-147,149-157,158-166,518-525,526-533 3dbh d3dbhc1 C:132-147,149-157,158-166,518-525,526-533 3dbr d3dbrg1 G:132-147,149-157,158-166,518-525,526-533 2nvu d2nvua1 A:132-147,149-157,158-166,518-525,526-533 3dbr d3dbrc1 C:132-147,149-157,158-166,518-525,526-533 3dbr d3dbre1 E:132-147,149-157,158-166,518-525,526-533 3dbl d3dblc1 C:132-147,149-157,158-166,518-525,526-533 6. d.18.1 ssDNA-binding transcriptional regulator domain ssDNA-binding transcriptional regulator domain helix-swapped dimer of beta(4)-alpha motifs 2gid d2gidb1 B:89-102,106-112,113-122,123-132,139-148 2gid d2gidj1 J:89-102,106-112,113-122,123-132,139-147 2gid d2gidk1 K:89-102,106-112,113-122,123-132,138-147 2gid d2gidp1 P:127-140,144-150,151-159,164-173,190-199 2gia d2giad1 D:89-102,106-112,113-121,124-132,139-147 2gje d2gjed1 D:89-102,106-112,113-122,123-132,139-148 2gia d2giab1 B:89-102,106-112,113-122,123-132,139-148 2gid d2gidd1 D:89-102,106-112,113-122,123-132,139-147 2gid d2gidg1 G:127-140,143-150,151-159,165-175,188-198 2gid d2gida1 A:127-140,144-150,151-159,165-175,188-198 2gia d2giaa1 A:127-140,143-150,151-159,165-175,188-198 2gia d2giag1 G:127-140,143-150,151-159,165-175,188-198 2it9 d2it9d1 D:34-56,64-71,73-82,83-92,100-107 1l3a d1l3aa_ A:154-164,169-176,185-195,200-211,212-223 2gid d2gidh1 H:127-140,144-149,151-159,164-175,188-199 1l3a d1l3ab_ B:154-164,169-176,185-195,200-211,212-223 1l3a d1l3ad_ D:154-164,169-175,185-195,200-211,212-223 2nvn d2nvna1 A:36-58,66-73,75-84,85-94,98-105 1l3a d1l3ac_ C:154-164,169-175,185-195,200-211,212-223 2it9 d2it9c1 C:34-59,64-71,73-82,83-95,97-107 2it9 d2it9a1 A:34-60,64-71,73-82,83-97,98-107 2it9 d2it9b1 B:34-59,64-71,73-82,83-95,97-108 12. d.383.1 PG1388-like PG1388-like consists of 2 alpha+beta subdomains, each having a meander beta-sheet; d1: alpha(2)-beta(7); d2: alpha(2)-beta(2)-alpha(2)-beta(2) 2p3p d2p3pb1 B:85-97,103-110,114-122,123-130,132-142 2p3p d2p3pa1 A:85-97,103-111,113-122,123-130,133-143 14. d.198.2 Arp2/3 complex subunits Secretion chaperone-like alpha-beta(3)-alpha-beta(2)-alpha; 2 layers: alpha/beta 2p9p d2p9pf1 F:4-21,46-56,58-67,68-76,113-119 1tyq d1tyqf_ F:3-21,46-56,58-67,68-76,113-119 2p9u d2p9uf1 F:2-21,46-56,58-67,68-76,113-119 2p9l d2p9lf1 F:3-22,46-56,58-67,68-76,112-119 2p9i d2p9id1 D:8-25,32-38,40-47,53-61,90-99 1tyq d1tyqd1 D:8-25,32-38,40-47,53-61,90-99 1u2v d1u2vf_ F:3-22,46-56,58-67,68-76,113-119 1u2v d1u2vd1 D:8-25,32-38,40-47,53-61,90-99 2p9n d2p9nf1 F:2-22,46-55,59-67,68-76,113-119 2p9s d2p9sf1 F:2-22,46-56,58-67,68-76,113-119 2p9u d2p9ud1 D:8-25,32-38,40-48,53-61,92-99 2p9k d2p9kd1 D:8-25,32-38,40-47,53-61,90-99 2p9n d2p9nd1 D:8-25,32-38,40-48,53-61,92-99 1k8k d1k8kf_ F:2-22,46-56,58-67,68-76,113-119 2p9k d2p9kf1 F:2-22,46-56,58-67,68-76,113-119 2p9s d2p9sd1 D:8-25,32-38,40-47,53-61,90-99 2p9l d2p9ld1 D:8-25,32-38,40-48,53-61,90-99 1k8k d1k8kd1 D:8-25,32-38,40-47,53-61,90-99 2p9k d2p9kd2 D:61-71,141-147,149-158,159-169,219-228 2p9n d2p9nd2 D:63-71,141-147,149-158,159-169,219-228 2p9i d2p9if1 F:2-22,46-56,58-67,68-76,113-119 1tyq d1tyqd2 D:63-71,141-147,149-158,159-169,219-228 2p9i d2p9id2 D:63-71,141-147,149-158,159-169,219-228 2p9p d2p9pd1 D:8-25,32-38,40-48,53-61,92-99 1k8k d1k8kd2 D:63-71,141-147,149-158,159-169,219-228 2p9n d2p9nd2 D:115-135,141-147,149-158,159-169,219-228 1u2v d1u2vd2 D:63-71,141-147,149-158,159-169,219-228 1tyq d1tyqd2 D:115-135,141-147,149-158,159-169,219-228 2p9i d2p9id2 D:115-135,141-147,149-158,159-169,219-228 2p9k d2p9kd2 D:115-135,141-147,149-158,159-169,219-228 1k8k d1k8kd2 D:115-135,141-147,149-158,159-169,219-228 1u2v d1u2vd2 D:115-135,141-147,149-158,159-169,219-228 2p9l d2p9ld2 D:61-71,141-146,150-158,159-169,219-228 2p9s d2p9sd2 D:63-71,141-146,150-158,159-169,219-228 2p9u d2p9ud2 D:63-71,141-146,150-158,159-169,219-228 2p9s d2p9sd2 D:115-135,141-146,150-158,159-169,219-228 2p9l d2p9ld2 D:115-135,141-146,150-158,159-169,219-228 2p9u d2p9ud2 D:115-135,141-146,150-158,159-169,219-228 2p9p d2p9pd2 D:63-71,141-147,150-158,159-169,219-228 2p9p d2p9pd2 D:115-135,141-147,150-158,159-169,219-228 16. d.21.1 Diaminopimelate epimerase-like duplication: consists of two similar domain swapped with C-terminal strands ! Diaminopimelate epimerase-like mixed beta-sheet folds into a barrel (n=8, S=14) around the central helix 2q9j d2q9ja1 A:76-88,93-100,101-110,112-120,256-263 2gkj d2gkja1 A:73-88,93-100,101-110,112-120,256-263 2gke d2gkea1 A:73-88,93-100,101-110,112-120,256-263 1gqz d1gqza1 A:76-88,93-100,101-110,112-120,256-263 2q9h d2q9ha1 A:76-88,93-100,101-110,112-120,256-263 1bwz d1bwza1 A:76-88,93-100,101-110,112-120,256-263 1s7j d1s7jb_ B:71-87,91-98,99-108,109-117,242-249 1s7j d1s7ja_ A:71-87,91-98,99-108,109-117,242-249 2h9f d2h9fa1 A:104-119,128-140,141-153,173-180,367-379 1u1x d1u1xb1 B:72-84,90-96,99-109,110-119,257-274 1u1w d1u1wb1 B:72-84,90-97,98-109,110-119,257-274 1xua d1xuab1 B:72-84,90-97,98-109,110-119,257-274 1xub d1xuba1 A:72-84,90-97,98-109,110-119,257-277 1t6k d1t6ka1 A:72-84,90-97,98-109,110-119,257-277 1u1v d1u1va1 A:72-87,90-97,98-109,110-119,257-277 1u1w d1u1wa1 A:72-84,90-97,98-109,110-119,257-277 1u1x d1u1xa1 A:72-84,90-97,98-109,110-119,257-277 1xua d1xuaa1 A:72-84,90-97,98-109,110-119,257-277 1sdj d1sdja1 A:72-88,90-99,100-111,112-122,274-284 1u0k d1u0kb1 B:74-89,93-101,102-113,114-124,264-281 1u0k d1u0ka1 A:74-89,93-101,102-113,114-124,264-281 1qya d1qyaa1 A:74-88,90-98,102-111,112-120,274-284 1qy9 d1qy9d1 D:72-88,90-99,100-111,112-120,274-284 1qy9 d1qy9b1 B:72-88,90-99,100-111,112-120,274-284 1qya d1qyab1 B:72-88,90-99,100-111,112-120,274-284 1qy9 d1qy9c1 C:72-88,90-99,100-111,112-120,274-284 1qy9 d1qy9a1 A:72-88,90-99,100-111,112-120,274-284 1tm0 d1tm0a_ A:90-105,112-121,122-133,134-156,300-311 1tm0 d1tm0b_ B:90-105,112-121,122-133,134-156,300-311 17. d.320.1 YojJ-like YojJ-like alpha-beta-X-beta-alpha-beta(2)-alpha-beta(3); 3 layers: a/b/a; 7-stranded mixed beta-sheet, order 2431567; strands 1 and 3 are parallel to each other 2fb5 d2fb5a1 A:76-91,92-100,179-187,191-197,198-203 2fb5 d2fb5c1 C:76-91,92-100,179-187,191-197,198-203 2fb5 d2fb5b1 B:76-91,92-100,179-187,191-197,198-203 18. b.177.1 YmcC-like YmcC-like 12-stranded meander beta-sheet, folded into a deformed beta-barrel; topological similarity to the LolA-like fold (scop_cf 89391) 2in5 d2in5b1 B:7-20,46-56,57-64,66-73,74-81 2in5 d2in5a1 A:7-20,44-56,57-64,66-73,74-81 21. d.165.1 Ribosome inactivating proteins (RIP) Ribosome inactivating proteins (RIP) contains mixed beta-sheet 1qi7 d1qi7a_ A:12-28,49-58,59-69,70-81,83-90 1abr d1abra_ A:13-29,50-58,62-71,72-81,82-88 1lpc d1lpca_ A:12-28,50-59,60-70,71-82,84-91 1lpd d1lpda_ A:12-28,50-59,60-70,71-82,84-91 2q3n d2q3na1 A:12-29,49-57,61-69,72-80,81-87 1lp8 d1lp8a_ A:12-28,50-59,60-70,71-82,84-91 1qcj d1qcja_ A:12-28,48-57,59-69,70-80,84-92 1rl0 d1rl0a_ A:12-28,50-59,60-70,71-82,84-91 1qcj d1qcjb_ B:12-29,48-57,59-69,70-80,84-92 1d6a d1d6ab_ B:12-28,48-57,59-69,70-81,83-92 1d6a d1d6aa_ A:12-28,48-57,59-69,70-81,83-92 2r9k d2r9ka1 A:13-29,52-61,63-73,74-83,84-91 1qci d1qcib_ B:12-28,48-57,59-69,70-81,83-92 1qci d1qcia_ A:12-28,48-57,59-69,70-81,83-92 1j1q d1j1qa_ A:12-28,48-57,59-69,70-81,82-90 1paf d1pafa_ A:12-28,48-57,59-69,70-81,83-92 1paf d1pafb_ B:12-28,48-57,59-69,70-81,83-92 1j1r d1j1ra_ A:12-28,48-57,59-69,70-81,82-90 1gik d1gika_ A:12-28,48-57,59-69,70-81,82-90 1sz6 d1sz6a_ A:13-30,52-61,63-73,74-83,84-91 3ctk d3ctka1 A:10-27,46-55,57-67,68-79,80-89 1il4 d1il4a_ A:17-34,56-65,67-77,78-87,88-94 1qcg d1qcga_ A:12-29,48-57,59-69,70-81,83-92 1pag d1paga_ A:12-28,48-57,59-69,70-81,83-92 1pag d1pagb_ B:12-28,48-57,59-69,70-81,83-92 1j1s d1j1sa_ A:12-28,48-57,59-69,70-81,82-90 1qcg d1qcgb_ B:12-29,48-57,59-69,70-81,83-92 1il3 d1il3a_ A:17-34,56-65,67-77,78-87,88-94 1puu d1puua_ A:13-30,52-61,63-73,74-83,84-91 1j4g d1j4gb_ B:10-26,46-55,58-67,68-77,78-85 1pum d1puma_ A:13-30,52-61,63-73,74-83,84-91 1ifu d1ifua_ A:17-34,56-65,67-77,78-87,88-94 1br5 d1br5a_ A:17-33,56-65,67-77,78-87,88-94 1bry d1bryy_ Y:10-26,46-55,58-67,68-77,78-85 1bry d1bryz_ Z:10-26,46-55,58-67,68-77,78-85 1nli d1nlia_ A:10-26,46-55,58-67,68-77,78-85 1mrj d1mrja_ A:10-26,46-55,58-67,68-77,78-85 1onk d1onka_ A:13-30,52-61,63-73,74-83,84-90 1br6 d1br6a_ A:17-34,56-65,67-77,78-87,88-94 2pjo d2pjoa1 A:17-34,56-65,67-77,78-87,88-94 2r3d d2r3da1 A:17-34,56-65,67-77,78-87,88-94 1il9 d1il9a_ A:17-34,56-65,67-77,78-87,88-94 2jdl d2jdlb1 B:10-26,46-55,58-67,68-77,78-85 2p8n d2p8na1 A:17-34,56-65,67-77,78-87,88-94 1m2t d1m2ta_ A:13-30,52-61,63-73,74-83,84-90 2r2x d2r2xa1 A:17-34,56-65,67-77,78-87,88-94 1ggp d1ggpa_ A:13-29,50-60,61-71,72-81,82-89 1mrk d1mrka_ A:10-26,46-55,58-67,68-77,78-85 1j4g d1j4gd_ D:10-26,46-55,58-67,68-77,78-85 1ifs d1ifsa_ A:17-34,56-65,67-77,78-87,88-94 1giu d1giua_ A:10-26,46-55,58-67,68-77,78-85 1hwn d1hwna_ A:14-31,53-62,65-74,75-84,85-91 1j4g d1j4gc_ C:10-26,46-55,58-67,68-77,78-85 1apa d1apaa_ A:17-34,53-62,64-74,75-86,87-96 1oql d1oqla_ A:13-30,52-61,63-73,74-83,84-89 1hwo d1hwoa_ A:14-31,53-62,65-74,75-84,85-91 1tcs d1tcsa_ A:10-26,46-55,58-67,68-77,78-85 1j1m d1j1ma_ A:17-34,56-65,67-77,78-87,88-94 1uq5 d1uq5a_ A:17-34,56-65,67-77,78-87,88-94 1uq4 d1uq4a_ A:17-34,56-65,67-77,78-87,88-94 1tfm d1tfma_ A:13-30,51-60,62-72,73-82,83-88 1hwp d1hwpa_ A:14-31,53-62,65-74,75-84,85-91 2aai d2aaia_ A:17-34,56-65,67-77,78-87,88-94 1qd2 d1qd2a_ A:10-26,46-55,58-67,68-77,78-85 1pc8 d1pc8a_ A:13-29,51-60,63-72,73-82,83-88 1ahc d1ahca_ A:10-26,46-55,58-67,68-77,78-85 1cf5 d1cf5a_ A:10-26,46-55,58-67,68-77,78-84 1ift d1ifta_ A:17-34,56-65,67-77,78-87,88-94 1yf8 d1yf8a1 A:13-30,51-60,62-72,73-82,83-88 1il5 d1il5b_ B:17-34,56-65,67-77,78-87,88-94 1ahb d1ahba_ A:10-26,46-55,58-67,68-77,78-85 1mri d1mria_ A:10-26,46-55,58-67,68-77,78-85 1ce7 d1ce7a_ A:13-30,51-60,62-72,73-82,83-88 2mll d2mlla_ A:13-30,51-60,62-72,73-82,83-88 1obs d1obsa_ A:17-34,56-65,67-77,78-87,88-94 1cf5 d1cf5b_ B:10-26,46-55,58-67,68-77,78-84 1rtc d1rtca_ A:17-34,56-65,67-77,78-87,88-94 1il5 d1il5a_ A:17-34,56-65,67-77,78-87,88-94 1mrg d1mrga_ A:10-26,46-55,58-67,68-77,78-84 1mom d1moma_ A:10-26,46-55,58-67,68-77,78-84 2jdl d2jdla1 A:10-26,46-55,58-67,68-77,78-83 1j4g d1j4ga_ A:10-26,46-55,58-67,68-77,78-83 1obt d1obta_ A:17-34,56-65,67-77,78-87,88-94 1gis d1gisa_ A:11-27,47-56,59-68,69-78,79-84 1rzo d1rzoc_ C:1017-1034,1056-1065,1067-1077,1078-1087,1088-1094 1nio d1nioa_ A:11-27,47-56,59-68,69-78,79-84 1aha d1ahaa_ A:10-26,46-55,58-67,68-77,78-83 1hwm d1hwma_ A:14-31,53-62,65-74,75-84,85-91 1f8q d1f8qa_ A:10-26,46-55,58-67,68-77,78-84 1mrh d1mrha_ A:10-26,46-55,58-67,68-77,78-83 1rzo d1rzoa_ A:1017-1036,1056-1065,1067-1077,1078-1087,1088-1094 24. d.313.1 Prenyltransferase-like the barrel channel harbours the substrate-binding site ! Antiparallel beta/alpha barrel (PT-barrel) tandem repeat of five alpha(2)-beta(2) motifs; antiparallel beta-sheet barrel, closed; n=10, S=10; order 123456789A; there is a channel along the barrel axis 1zb6 d1zb6a1 A:3-22,61-68,104-113,116-124,159-168 1zdw d1zdwa1 A:3-22,61-68,104-113,116-124,159-168 1zcw d1zcwa1 A:3-22,61-68,104-113,116-124,159-168 1zdy d1zdya1 A:3-22,61-68,104-113,115-124,159-168 1zcw d1zcwa1 A:73-82,116-124,159-168,169-177,213-220 1zb6 d1zb6a1 A:73-82,116-124,159-168,169-177,213-220 1zdw d1zdwa1 A:73-82,116-124,159-168,169-177,213-220 1zdy d1zdya1 A:73-82,115-124,159-168,169-177,212-220 1zdw d1zdwa1 A:53-60,213-220,226-236,269-278,279-290 25. d.290.1 AF0104/ALDC/Ptd012-like characteristic metal ion (zinc)-binding motif in the putative active site ! AF0104/ALDC/Ptd012-like duplication: consists of two similar beta-alpha-beta(4) motifs 1xv2 d1xv2d_ D:91-103,108-119,149-161,171-179,183-188 1xv2 d1xv2c_ C:91-104,108-119,149-161,171-179,183-188 1xv2 d1xv2b_ B:91-104,108-119,149-161,171-179,183-188 1xv2 d1xv2a_ A:91-103,108-119,149-161,171-179,183-188 2hx0 d2hx0a1 A:23-36,38-50,67-80,81-92,94-102 2nmu d2nmua1 A:23-36,38-50,67-80,81-92,94-102 1xv2 d1xv2c_ C:24-32,33-40,42-51,53-58,60-65 1xv2 d1xv2d_ D:24-32,32-40,42-51,53-58,60-65 1xv2 d1xv2b_ B:24-32,33-40,42-51,53-58,60-65 1xv2 d1xv2a_ A:24-32,33-39,43-51,53-58,60-65 26. e.7.1 Carbohydrate phosphatase Carbohydrate phosphatase N-terminal domain is an alpha+beta, C-terminal domain is an alpha/beta with mixed beta-sheet 1vdw d1vdwb_ B:5-22,99-108,109-120,121-129,131-136 1lbw d1lbwb_ B:302-325,397-405,411-421,422-430,431-436 1dbz d1dbzb_ B:35-59,107-116,121-128,139-148,183-193 1xi6 d1xi6a_ A:2-22,99-108,109-120,121-129,131-136 1lbv d1lbva_ A:2-25,97-106,111-121,122-130,131-136 1lby d1lbyb_ B:302-325,397-405,411-421,422-430,431-436 1lbv d1lbvb_ B:302-325,397-405,411-421,422-430,431-436 1d9q d1d9qc_ C:35-59,107-116,121-128,139-148,183-193 1dcu d1dcua_ A:35-59,107-116,121-128,139-148,183-193 1d9q d1d9qd_ D:35-59,107-116,121-128,139-148,183-193 1lby d1lbya_ A:2-25,97-106,111-121,122-130,131-136 1lbw d1lbwa_ A:2-25,97-106,111-121,122-130,131-136 2qvu d2qvub1 B:28-50,131-141,159-168,170-178,179-189 1lbz d1lbzb_ B:302-325,397-405,411-421,422-430,431-436 1dbz d1dbza_ A:35-59,109-116,120-128,139-149,183-193 1nv4 d1nv4a_ A:1028-1051,1131-1141,1159-1168,1170-1178,1179-1189 2qvv d2qvvb1 B:28-50,131-141,159-168,170-178,179-189 1nuy d1nuya_ A:1028-1051,1131-1141,1159-1168,1170-1178,1179-1189 1q9d d1q9db_ B:28-50,131-141,159-168,170-178,179-189 1nv1 d1nv1a_ A:1028-1051,1131-1141,1159-1168,1170-1178,1179-1189 1nv5 d1nv5a_ A:1028-1051,1131-1141,1159-1168,1170-1178,1179-1189 1spi d1spia_ A:38-60,141-150,185-194,196-204,205-215 1fpf d1fpfb_ B:28-50,131-141,159-168,170-178,179-189 1fsa d1fsab_ B:28-50,131-141,159-168,170-178,179-189 1lbz d1lbza_ A:2-25,97-106,111-121,122-130,131-136 1fpg d1fpgb_ B:28-50,131-141,159-168,170-178,179-189 1dcu d1dcud_ D:35-59,110-116,120-128,139-149,183-193 1nv0 d1nv0a_ A:1028-1051,1131-1141,1159-1168,1170-1178,1179-1189 2f3b d2f3ba1 A:28-51,131-141,159-168,170-178,179-189 1q9d d1q9da_ A:28-50,131-141,159-168,170-178,179-189 1eyi d1eyia_ A:28-51,131-141,159-168,170-178,179-189 1fpd d1fpdb_ B:28-50,131-141,159-168,170-178,179-189 1fpj d1fpja_ A:28-50,131-141,159-168,170-178,179-189 1fpe d1fpeb_ B:28-50,131-141,159-168,170-178,179-189 1nuz d1nuza_ A:1028-1051,1131-1141,1159-1168,1170-1178,1179-1189 1g0i d1g0ib_ B:302-322,396-405,406-417,418-426,427-433 1nux d1nuxa_ A:1028-1051,1131-1141,1160-1168,1170-1178,1179-1189 1rdz d1rdzb_ B:28-50,131-141,159-168,170-178,179-189 1rdz d1rdza_ A:28-50,131-141,159-168,170-178,179-189 1fj6 d1fj6a_ A:28-51,131-141,159-168,170-178,179-189 1fbg d1fbgb_ B:28-51,131-141,159-168,170-178,179-189 1nv3 d1nv3a_ A:1028-1051,1131-1141,1160-1168,1170-1178,1179-1189 1g0i d1g0ia_ A:2-22,96-105,106-117,118-126,127-133 1fbp d1fbpb_ B:28-51,131-141,159-168,170-178,179-189 1vdw d1vdwa_ A:2-27,99-108,109-120,121-129,131-136 1nv2 d1nv2a_ A:1028-1051,1131-1141,1159-1168,1170-1178,1179-1189 1dcu d1dcub_ B:35-59,109-116,120-128,139-149,183-193 1g0h d1g0hb_ B:302-322,396-405,406-417,418-426,427-433 1fpl d1fpla_ A:28-50,131-141,159-168,170-178,179-189 1bk4 d1bk4a_ A:28-51,131-141,159-168,170-178,179-189 1cnq d1cnqa_ A:28-51,131-141,159-168,170-178,179-189 1g0h d1g0ha_ A:2-22,96-105,106-117,118-126,127-133 1nv6 d1nv6a_ A:1028-1051,1131-1141,1159-1168,1170-1178,1179-1189 1fpk d1fpkb_ B:28-51,131-141,159-168,170-178,179-189 1fbd d1fbdb_ B:28-51,131-141,159-168,170-178,179-189 1rdy d1rdyb_ B:28-50,131-141,159-168,170-178,179-189 1fpi d1fpia_ A:28-50,131-141,159-168,170-178,179-189 1lev d1levf_ F:28-51,131-141,159-168,170-178,179-189 1fpl d1fplb_ B:28-50,131-141,159-168,170-178,179-189 1fta d1ftac_ C:28-50,131-141,159-168,170-178,179-189 1fbe d1fbea_ A:28-51,131-141,159-168,170-178,179-189 1d9q d1d9qa_ A:35-59,109-116,120-128,139-149,183-193 1kz8 d1kz8f_ F:27-50,131-141,159-168,170-178,179-189 1kz8 d1kz8a_ A:27-50,131-141,159-168,170-178,179-189 1fbe d1fbeb_ B:28-51,131-141,160-168,170-178,179-189 1fta d1ftaa_ A:28-50,131-141,159-168,170-178,179-189 1dk4 d1dk4b_ B:302-322,396-405,406-417,418-426,429-433 1fpi d1fpib_ B:28-50,131-141,159-168,170-178,179-189 2fbp d2fbpa_ A:28-51,131-141,159-168,170-178,179-189 2qvu d2qvua1 A:27-50,131-141,159-168,170-178,179-189 1fsa d1fsaa_ A:28-50,131-141,159-168,170-178,179-189 1fbh d1fbha_ A:28-51,131-141,159-168,170-178,179-189 1fbg d1fbga_ A:28-51,131-141,159-168,170-178,179-189 2qvv d2qvva1 A:27-50,131-141,159-168,170-178,179-189 1dk4 d1dk4a_ A:2-22,96-105,106-117,118-126,129-133 1fbf d1fbfa_ A:28-51,131-141,159-168,170-178,179-189 1nv7 d1nv7a_ A:1027-1050,1131-1141,1159-1168,1170-1178,1179-1189 2fbp d2fbpb_ B:27-51,131-141,159-168,170-178,179-189 1qgx d1qgxa_ A:3-25,156-165,166-175,195-202,203-211 1k9z d1k9za_ A:3-25,156-165,166-175,195-202,203-211 1spi d1spid_ D:36-60,141-150,185-194,196-204,205-215 1fbf d1fbfb_ B:27-51,131-141,159-168,170-178,179-189 1nv7 d1nv7b_ B:2027-2050,2131-2141,2159-2168,2170-2178,2179-2189 1k9y d1k9ya_ A:3-25,156-165,166-175,195-202,203-211 1ka0 d1ka0a_ A:3-25,156-165,166-175,195-202,203-211 1eyj d1eyja_ A:27-50,131-141,159-168,170-178,179-189 1fpb d1fpba_ A:28-51,131-141,159-168,170-178,179-189 1fpb d1fpbb_ B:27-51,131-141,159-168,170-178,179-189 1fbc d1fbca_ A:28-51,131-141,159-168,170-178,179-189 1rdy d1rdya_ A:27-50,131-141,159-168,170-178,179-189 1nuw d1nuwa_ A:1027-1051,1131-1141,1159-1168,1170-1178,1179-1189 5fbp d5fbpa_ A:28-51,131-141,159-168,170-178,179-189 1eyk d1eyka_ A:27-50,131-141,159-168,170-178,179-189 1eyj d1eyjb_ B:27-50,131-141,159-168,170-178,179-189 1fbp d1fbpa_ A:27-51,131-141,159-168,170-178,179-189 2f3h d2f3ha1 A:27-50,131-141,160-168,170-178,179-189 1fpj d1fpjb_ B:27-50,131-141,159-168,170-178,179-189 1fta d1ftab_ B:27-50,131-141,159-168,170-178,179-189 1fbc d1fbcb_ B:27-51,131-141,159-168,170-178,179-189 1ka1 d1ka1a_ A:3-25,156-165,166-175,195-202,205-211 1fbd d1fbda_ A:28-51,131-141,159-168,170-178,179-189 1fpk d1fpka_ A:28-51,131-141,159-168,170-178,179-189 4fbp d4fbpa_ A:27-50,131-141,159-168,170-178,179-189 1fpg d1fpga_ A:27-50,131-141,159-168,170-178,179-189 1fbh d1fbhb_ B:27-51,131-141,159-168,170-178,179-189 3fbp d3fbpb_ B:28-51,131-141,159-168,170-178,179-189 1frp d1frpa_ A:27-50,131-141,159-168,170-178,179-189 4fbp d4fbpc_ C:27-50,131-141,159-168,170-178,179-189 2f3h d2f3hb1 B:27-50,131-141,159-168,170-178,179-189 4fbp d4fbpb_ B:27-50,131-141,159-168,170-178,179-189 1eyk d1eykb_ B:27-50,131-141,159-168,170-178,179-189 4fbp d4fbpd_ D:27-50,131-141,159-168,170-178,179-189 1frp d1frpb_ B:27-50,131-141,159-168,170-178,179-189 1fpd d1fpda_ A:27-50,131-141,159-168,170-178,179-189 1fj9 d1fj9a_ A:27-50,131-141,159-168,170-178,179-189 1fj9 d1fj9b_ B:27-50,131-141,159-168,170-178,179-189 1fpe d1fpea_ A:27-50,131-141,159-168,170-178,179-189 1fpf d1fpfa_ A:27-50,131-141,159-168,170-178,179-189 2f3d d2f3da1 A:27-51,131-141,159-168,170-178,179-189 1fta d1ftad_ D:27-50,131-141,159-168,170-178,179-189 5fbp d5fbpb_ B:27-51,131-141,159-168,170-178,179-189 3fbp d3fbpa_ A:27-51,131-141,159-168,170-178,179-189 1lev d1leva_ A:27-51,131-141,159-168,170-178,179-189 1inp d1inpa_ A:3-26,182-192,193-205,216-225,227-231 1imf d1imfa_ A:5-29,105-114,115-126,127-135,138-142 1lbx d1lbxa_ A:2-25,97-106,113-121,122-130,131-136 1ime d1imeb_ B:5-30,105-114,115-126,127-135,136-142 2hhm d2hhma_ A:5-30,105-114,115-126,127-135,136-142 2hhm d2hhmb_ B:5-30,105-114,115-126,127-135,136-142 1awb d1awbb_ B:5-30,105-114,115-126,127-135,136-142 1awb d1awba_ A:5-30,105-114,115-126,127-135,136-142 1ime d1imea_ A:5-30,105-114,115-126,127-135,136-142 1imc d1imcb_ B:5-30,105-114,115-126,127-135,138-142 1d9q d1d9qb_ B:35-59,107-116,120-128,139-149,183-193 1dbz d1dbzc_ C:35-59,107-116,120-128,139-149,183-193 1imd d1imdb_ B:5-30,105-114,115-126,127-135,138-142 1dbz d1dbzd_ D:35-59,107-116,120-128,139-149,183-193 1lbx d1lbxb_ B:302-325,397-405,413-421,422-430,431-436 1spi d1spib_ B:37-60,141-151,184-194,196-203,207-215 1ni9 d1ni9a_ A:2-27,99-109,277-286,299-311,312-324 1ima d1imaa_ A:5-30,105-114,115-126,127-135,138-142 1imb d1imbb_ B:5-30,105-114,115-126,127-135,138-142 1ima d1imab_ B:5-30,105-114,115-126,127-135,138-142 1imc d1imca_ A:5-30,105-114,115-126,127-135,138-142 1spi d1spic_ C:38-60,141-151,184-194,196-204,207-214 1imd d1imda_ A:5-30,105-114,116-126,127-135,136-142 1jp4 d1jp4a_ A:6-33,133-142,143-154,165-173,175-179 1imb d1imba_ A:5-30,105-114,116-126,127-135,138-142 1dcu d1dcuc_ C:35-65,107-116,120-128,139-149,183-193 1dbz d1dbzb_ B:35-59,139-148,183-193,195-203,206-214 1dcu d1dcua_ A:35-59,139-148,183-193,195-203,206-214 1dcu d1dcub_ B:35-59,139-149,183-193,195-203,206-214 1d9q d1d9qc_ C:35-59,139-148,183-193,195-203,206-214 1d9q d1d9qd_ D:35-59,139-148,183-193,195-203,206-214 1dcu d1dcud_ D:35-59,139-149,183-193,195-203,206-214 1dbz d1dbza_ A:35-59,139-149,183-193,195-203,206-214 1dbz d1dbzd_ D:35-59,139-149,183-193,195-203,206-214 1dbz d1dbzc_ C:35-59,139-149,183-193,195-203,206-214 1d9q d1d9qb_ B:35-59,139-149,183-193,195-203,206-214 1d9q d1d9qa_ A:35-59,139-149,183-193,195-203,206-214 1dcu d1dcuc_ C:35-65,139-149,183-193,195-203,206-214 1rdx d1rdxb_ B:27-51,134-141,161-168,170-178,179-189 28. b.125.1 Prokaryotic lipoproteins and lipoprotein localization factors LolA-like prokaryotic lipoproteins and lipoprotein localization factors 11 stranded sheet partly folded in a corner-like structure filled with a few short helices 2byo d2byoa1 A:21-38,141-152,166-175,179-189,190-201 1iwm d1iwmb_ B:110-120,134-144,145-154,165-172,173-186 1iwl d1iwla_ A:1-14,111-117,123-133,135-145,147-160 1ua8 d1ua8a_ A:1-14,111-118,123-133,135-145,147-160 1iwn d1iwna_ A:110-120,134-144,145-154,165-172,173-186 1iwm d1iwma_ A:110-120,134-144,145-154,165-172,173-186 1iwl d1iwla_ A:88-96,111-117,123-133,135-145,147-160 1ua8 d1ua8a_ A:88-96,111-118,123-133,135-145,147-160 33. d.1.1 Microbial ribonucleases Microbial ribonucleases single helix packs against antiparallel beta-sheet 2c4b d2c4ba1 A:6-18,70-76,85-92,94-101,106-112 1bnr d1bnra_ A:6-18,70-76,85-92,94-101,104-109 1b2u d1b2ua_ A:6-18,70-76,85-92,94-101,106-110 1gou d1goua_ A:5-17,69-75,84-91,93-100,105-109 2rbi d2rbib_ B:5-17,69-75,84-91,93-100,105-109 1b2s d1b2sa_ A:6-18,70-76,85-92,94-101,106-110 1bgs d1bgsb_ B:6-18,70-76,85-92,94-101,106-110 1gou d1goub_ B:5-17,69-75,84-91,93-100,105-109 1goy d1goya_ A:5-17,69-75,84-91,93-100,105-109 1x1y d1x1ya1 A:6-18,70-76,85-92,94-101,106-110 1pyl d1pylb_ B:14-27,53-59,69-76,78-85,90-95 1b2s d1b2sc_ C:6-18,70-76,85-92,94-101,106-110 2rbi d2rbia_ A:5-17,69-75,84-91,93-100,105-109 1b27 d1b27a_ A:6-18,70-76,85-92,94-101,106-110 1b3s d1b3sa_ A:6-18,70-76,85-92,94-101,106-110 1brs d1brsa_ A:6-18,70-76,85-92,94-101,106-110 1gov d1gova_ A:5-17,69-75,84-91,93-100,105-109 1x1x d1x1xa1 A:6-18,70-76,85-92,94-101,106-110 1brs d1brsc_ C:6-18,70-76,85-92,94-101,106-110 1brk d1brkb_ B:6-18,70-76,85-92,94-101,106-110 1py3 d1py3b_ B:14-27,53-59,69-76,78-85,90-95 1bsa d1bsac_ C:6-18,70-76,85-92,94-101,106-110 1gov d1govb_ B:5-17,69-75,84-91,93-100,105-109 1pyl d1pyla_ A:14-27,53-59,69-76,78-85,90-95 1x1w d1x1wa1 A:6-18,70-76,85-92,94-101,106-110 1b27 d1b27c_ C:6-18,70-76,85-92,94-101,106-110 1bgs d1bgsc_ C:6-18,70-76,85-92,94-101,106-110 1brg d1brgc_ C:6-18,70-76,85-92,94-101,106-110 1bnj d1bnjc_ C:6-18,70-76,85-92,94-101,106-110 2f56 d2f56b1 B:4-16,68-74,83-90,92-99,104-108 1bsd d1bsdb_ B:6-18,70-76,85-92,94-101,106-110 1brk d1brkc_ C:6-18,70-76,85-92,94-101,106-110 1brj d1brjc_ C:6-18,70-76,85-92,94-101,106-110 1x1u d1x1ua1 A:6-18,70-76,85-92,94-101,106-110 1bsc d1bscb_ B:6-18,70-76,85-92,94-101,106-110 1x1y d1x1yc1 C:6-18,70-76,85-92,94-101,106-110 1bsc d1bscc_ C:6-18,70-76,85-92,94-101,106-110 1b20 d1b20c_ C:6-18,70-76,85-92,94-101,106-110 1py3 d1py3a_ A:14-27,53-59,69-76,78-85,90-95 1py3 d1py3c_ C:14-27,53-59,69-76,78-85,90-95 1bng d1bngc_ C:6-18,70-76,85-92,94-101,106-110 1buj d1buja_ A:5-17,69-75,85-91,93-99,105-109 1b21 d1b21b_ B:6-18,70-76,85-92,94-101,106-110 2f5w d2f5wb1 B:4-16,68-74,83-90,92-99,104-108 1b2x d1b2xb_ B:6-18,70-76,85-92,94-101,106-110 1b2z d1b2zc_ C:6-18,70-76,85-92,94-101,106-110 2f5m d2f5mc1 C:4-16,68-74,83-90,92-99,104-108 1bri d1brib_ B:6-18,70-76,85-92,94-101,106-110 1bnf d1bnfc_ C:6-18,70-76,85-92,94-101,106-110 2f56 d2f56c1 C:4-16,68-74,83-90,92-99,104-108 1x1w d1x1wc1 C:6-18,70-76,85-92,94-101,106-110 1b21 d1b21c_ C:6-18,70-76,85-92,94-101,106-110 1bne d1bnec_ C:6-18,70-76,85-92,94-101,106-110 1brg d1brgb_ B:6-18,70-76,85-92,94-101,106-110 1b2x d1b2xc_ C:6-18,70-76,85-92,94-101,106-110 1bao d1baob_ B:6-18,70-76,85-92,94-101,106-110 1bsa d1bsaa_ A:6-18,70-76,85-92,94-101,106-110 1brj d1brjb_ B:6-18,70-76,85-92,94-101,106-110 2f5w d2f5wc1 C:4-16,68-74,83-90,92-99,104-108 2f5m d2f5mb1 B:4-16,68-74,83-90,92-99,104-108 1bse d1bsea_ A:6-18,70-76,85-92,94-101,106-110 1bns d1bnsc_ C:6-18,70-76,85-92,94-101,106-110 1bng d1bngb_ B:6-18,70-76,85-92,94-101,106-110 1b20 d1b20a_ A:6-18,70-76,85-92,94-101,106-110 1b3s d1b3sc_ C:6-18,69-76,85-93,94-101,106-110 1brk d1brka_ A:6-18,70-76,85-92,94-101,106-110 1bnj d1bnjb_ B:6-18,70-76,85-92,94-101,106-110 1bne d1bneb_ B:6-18,70-76,85-92,94-101,106-110 1bsd d1bsda_ A:6-18,70-76,85-92,94-101,106-110 1bri d1bric_ C:6-18,70-76,85-92,94-101,106-110 1ban d1banb_ B:6-18,70-76,85-92,94-101,106-110 1b2x d1b2xa_ A:6-18,70-76,85-92,94-101,106-110 1bsd d1bsdc_ C:6-18,70-76,85-92,94-101,106-110 1brn d1brnm_ M:6-18,70-76,85-92,94-101,106-110 1x1u d1x1uc1 C:6-18,70-76,85-92,94-101,106-110 1bnf d1bnfb_ B:6-18,70-76,85-92,94-101,106-110 1b20 d1b20b_ B:6-18,70-76,85-92,94-101,106-110 2f5w d2f5wa1 A:4-16,68-74,83-90,92-99,104-108 1bne d1bnea_ A:6-18,70-76,85-92,94-101,106-110 1bsc d1bsca_ A:6-18,70-76,85-92,94-101,106-110 1bsa d1bsab_ B:6-18,70-76,85-92,94-101,106-110 1a2p d1a2pc_ C:6-18,70-76,85-92,94-101,106-110 1ban d1banc_ C:6-18,70-76,85-92,94-101,106-110 1rnb d1rnba_ A:6-18,70-76,85-92,94-101,106-110 1bri d1bria_ A:6-18,70-76,85-92,94-101,106-110 1bns d1bnsb_ B:6-18,69-76,85-93,94-101,106-110 1bao d1baoc_ C:6-18,70-76,85-92,94-101,106-110 1bsb d1bsba_ A:6-18,70-76,85-92,94-101,106-110 1brj d1brja_ A:6-18,70-76,85-92,94-101,106-110 1bni d1bnic_ C:6-18,70-76,85-92,94-101,106-110 1brh d1brha_ A:6-18,70-76,85-92,94-101,106-110 1b2z d1b2za_ A:6-18,70-76,85-92,94-101,106-110 1bao d1baoa_ A:6-18,70-76,85-92,94-101,106-110 1a2p d1a2pa_ A:6-18,70-76,85-92,94-101,106-110 2c4b d2c4bb1 B:6-18,70-76,85-92,93-101,106-114 1bni d1bnib_ B:6-18,70-76,85-92,94-101,106-110 1b21 d1b21a_ A:6-18,70-76,85-92,94-101,106-110 1bng d1bnga_ A:6-18,70-76,85-92,94-101,106-110 1ban d1bana_ A:6-18,70-76,85-92,94-101,106-110 1bnf d1bnfa_ A:6-18,70-76,85-92,94-101,106-110 2f4y d2f4ya1 A:4-16,68-74,83-90,92-99,104-108 2f5m d2f5ma1 A:4-16,68-74,83-90,92-99,104-108 1bnj d1bnja_ A:6-18,70-76,85-92,94-101,106-110 1rn4 d1rn4a_ A:12-30,55-61,75-82,84-93,99-103 1ay7 d1ay7a_ A:12-25,51-57,67-74,78-84,89-94 1box d1boxa_ A:12-25,51-57,67-74,78-84,89-94 1mgw d1mgwa_ A:15-28,54-60,70-77,81-87,92-97 1mgr d1mgra_ A:15-28,54-60,70-77,81-87,92-97 1sar d1sara_ A:12-25,51-57,67-74,78-84,89-94 1gmq d1gmqa_ A:12-25,51-57,67-74,78-84,89-94 1sar d1sarb_ B:12-25,51-57,67-74,78-84,89-94 1rsn d1rsna_ A:12-25,51-57,67-74,78-84,89-94 1ucl d1ucla_ A:12-25,51-57,67-74,78-84,89-94 1gmp d1gmpb_ B:12-25,51-57,67-74,78-84,89-94 1t2i d1t2ia_ A:12-25,51-57,67-74,78-84,89-94 1gmp d1gmpa_ A:12-25,51-57,67-74,78-84,89-94 1lni d1lnia_ A:12-25,51-57,67-74,78-84,89-94 1gmq d1gmqb_ B:12-25,51-57,67-74,78-84,89-94 1t2h d1t2hb_ B:12-25,51-57,67-74,78-84,89-94 1iyy d1iyya_ A:12-30,56-61,75-81,85-93,98-103 1uck d1ucka_ A:12-25,51-57,67-74,78-84,89-94 1uci d1ucib_ B:12-25,51-57,67-74,78-84,89-94 1rsn d1rsnb_ B:12-25,51-57,67-74,78-84,89-94 2sar d2sara_ A:12-25,51-57,67-74,78-84,89-94 1i70 d1i70a_ A:12-25,51-57,67-74,78-84,89-94 1rgf d1rgfb_ B:12-25,51-57,67-74,78-84,89-94 1gmr d1gmrb_ B:12-25,51-57,67-74,78-84,89-94 1i8v d1i8va_ A:12-25,51-57,67-74,78-84,89-94 1i70 d1i70b_ B:12-25,51-57,67-74,78-84,89-94 1uck d1uckb_ B:12-25,51-57,67-74,78-84,89-94 1ucl d1uclb_ B:12-25,51-57,67-74,78-84,89-94 1lni d1lnib_ B:12-25,51-57,67-74,78-84,89-94 1rgh d1rgha_ A:12-25,51-57,67-74,78-84,89-94 1rge d1rgea_ A:12-25,51-57,67-74,78-84,89-94 1rgg d1rgga_ A:12-25,51-57,67-74,78-84,89-94 1uci d1ucia_ A:12-25,51-57,67-74,78-84,89-94 1t2h d1t2ha_ A:12-25,51-57,67-74,78-84,89-94 1rgf d1rgfa_ A:12-25,51-57,67-74,78-84,89-94 1gmr d1gmra_ A:12-25,51-57,67-74,78-84,89-94 1i8v d1i8vb_ B:12-25,51-57,67-74,78-84,89-94 1rgh d1rghb_ B:12-25,51-57,67-74,78-84,89-94 2sar d2sarb_ B:12-25,51-57,67-74,78-84,89-94 1ucj d1ucja_ A:12-25,51-57,67-74,78-84,89-94 1rgg d1rggb_ B:12-25,51-57,67-74,78-84,89-94 1rge d1rgeb_ B:12-25,51-57,67-74,78-84,89-94 1ucj d1ucjb_ B:12-25,51-57,67-74,78-84,89-94 1c54 d1c54a_ A:12-25,51-57,67-74,78-84,89-94 38. d.98.1 beta-lactamase-inhibitor protein, BLIP BLIP-like alpha(2)-beta(4); 2 layers: alpha/beta 2b5r d2b5rc1 C:1005-1013,1038-1046,1051-1060,1065-1074,1108-1117 1s0w d1s0wd_ D:1005-1013,1039-1048,1049-1060,1065-1074,1108-1117 1jtg d1jtgd_ D:5-13,65-74,108-117,124-133,145-153 1jtg d1jtgb_ B:5-13,65-74,108-117,124-133,145-153 1jtg d1jtgd_ D:5-13,39-48,49-60,65-74,108-117 2b5r d2b5rd1 D:1005-1013,1065-1074,1108-1117,1124-1133,1145-1153 2b5r d2b5rc1 C:1005-1013,1065-1074,1108-1117,1124-1133,1145-1153 1jtg d1jtgb_ B:5-13,39-48,49-60,65-74,108-117 2g2w d2g2wb1 B:5-13,39-45,51-60,65-74,108-117 1s0w d1s0wd_ D:1005-1013,1065-1074,1108-1117,1124-1133,1145-1153 1s0w d1s0wc_ C:1005-1013,1039-1048,1049-1060,1065-1074,1108-1117 2g2w d2g2wb1 B:5-13,65-74,108-117,124-133,145-153 1s0w d1s0wc_ C:1005-1013,1065-1074,1108-1117,1124-1133,1145-1153 2b5r d2b5rd1 D:1005-1013,1039-1044,1052-1060,1065-1074,1108-1117 2g2u d2g2ub1 B:5-13,39-48,49-60,65-74,108-117 43. d.220.1 Metal cation-transporting ATPase, ATP-binding domain N Metal cation-transporting ATPase, ATP-binding domain N unusual fold; core: beta-alpha(2)-beta(3)-alpha(2)-beta(2); 6-stranded antiparallel beta-sheet, order: 165432 2b8e d2b8ec2 C:445-460,491-496,497-502,529-537,538-548 1kju d1kjua3 A:407-422,492-499,510-517,559-568,591-600 2b8e d2b8ea2 A:445-460,491-496,497-502,529-537,538-548 2b8e d2b8eb2 B:445-460,491-496,497-502,529-537,538-548 1vfp d1vfpb3 B:407-421,492-500,510-517,559-568,591-601 1vfp d1vfpa3 A:407-421,492-500,510-517,559-568,591-601 1t5t d1t5ta3 A:407-421,492-500,510-517,559-568,591-601 1t5s d1t5sa3 A:407-421,491-500,510-517,559-568,591-601 1wpg d1wpgc3 C:407-421,491-500,510-517,559-568,591-601 1wpg d1wpgb3 B:407-421,491-500,510-517,559-568,591-601 3b9b d3b9ba3 A:407-421,492-500,510-517,559-568,591-601 1u7q d1u7qa_ A:329-344,381-389,390-397,428-436,437-447 1svj d1svja_ A:329-344,381-389,390-397,428-436,437-447 1iwo d1iwoa3 A:407-422,492-501,510-517,559-568,591-601 1iwo d1iwob3 B:407-422,492-501,510-517,559-568,591-601 3b9r d3b9rb3 B:407-421,491-500,509-517,559-568,591-601 1wpg d1wpgd3 D:407-421,491-500,509-517,559-568,591-601 1wpg d1wpga3 A:407-421,491-500,509-517,559-568,591-601 3b9r d3b9ra3 A:407-422,492-500,509-517,559-568,591-601 2zbg d2zbga3 A:407-421,492-500,509-517,559-568,591-601 2zbe d2zbeb3 B:407-421,491-500,509-517,559-568,591-601 2zbe d2zbea3 A:407-421,491-500,509-517,559-568,591-601 2zbf d2zbfa3 A:407-421,491-500,509-517,559-568,591-601 1xp5 d1xp5a3 A:407-421,492-500,509-517,559-568,591-601 2zbd d2zbda3 A:407-421,492-500,509-517,559-568,591-601 1su4 d1su4a3 A:407-422,491-500,509-517,559-568,591-601 2a29 d2a29a1 A:329-345,381-389,390-397,428-436,437-448 2a00 d2a00a1 A:329-345,381-389,390-397,428-436,437-448 1q3i d1q3ia_ A:408-424,481-488,495-503,543-553,576-587 44. d.317.1 YkuJ-like YkuJ-like alpha-beta(4)-alpha; 2 layers a/b; antiparallel beta-sheet, order 1234 2ffg d2ffga1 A:2-22,24-32,33-44,45-53,59-65 2ffg d2ffgb1 B:2-22,23-32,33-44,45-53,59-65 45. b.38.2 YhbC-like, C-terminal domain Sm-like fold core: barrel, open; n*=4, S*=8; meander; SH3-like topology 1ib8 d1ib8a1 A:95-103,103-111,119-126,131-140,141-150 48. e.47.1 39 kda initiator binding protein, IBP39, C-terminal domains 39 kda initiator binding protein, IBP39, C-terminal domains 2 closely associated domains: (1) all-alpha, EF-hand like; (2) alpha+beta, Frataxin-like 1q88 d1q88b_ B:260-269,270-277,282-289,290-298,307-311 1q89 d1q89a_ A:260-269,272-277,282-289,290-298,307-311 1q87 d1q87b_ B:258-265,272-277,282-289,290-298,307-311 50. d.328.1 CorA soluble domain-like CorA soluble domain-like beta(2)-alpha-beta-alpha(2)-beta(4)-alpha(3); 3 layers: a/b/a; mixed beta-sheet, order 2137654; strands 3 and 7 are parallel 2bbh d2bbha1 A:83-93,97-103,104-115,122-133,134-141 2bbj d2bbjf1 F:83-93,97-103,104-115,122-133,134-141 2bbj d2bbjd1 D:83-93,97-103,104-115,122-133,134-141 2bbj d2bbja1 A:83-93,97-103,104-115,122-133,134-141 2bbj d2bbje1 E:83-93,97-103,104-116,121-133,134-141 2bbj d2bbjb1 B:83-93,97-103,104-116,121-133,134-141 2hn2 d2hn2e1 E:5083-5093,5097-5103,5104-5118,5119-5133,5134-5141 2hn2 d2hn2b1 B:2083-2093,2097-2103,2104-2118,2119-2133,2134-2141 2hn2 d2hn2c1 C:3083-3093,3097-3103,3104-3118,3119-3133,3134-3141 2hn2 d2hn2a1 A:1083-1093,1097-1103,1104-1118,1119-1133,1134-1141 2hn2 d2hn2d1 D:4083-4093,4097-4103,4104-4118,4119-4133,4134-4141 2iub d2iubc1 C:83-93,97-103,104-118,119-133,134-141 2iub d2iubh1 H:83-93,97-103,104-118,119-133,134-141 2iub d2iubd1 D:83-93,97-103,104-118,119-133,134-141 2iub d2iubj1 J:83-93,97-103,104-118,119-133,134-141 2iub d2iuba1 A:83-93,97-103,104-118,119-133,134-141 2iub d2iube1 E:83-93,97-103,104-118,119-133,134-141 2iub d2iubb1 B:83-93,97-103,104-118,119-133,134-141 2iub d2iubg1 G:83-93,97-103,104-118,119-133,134-141 2iub d2iubi1 I:83-93,97-103,104-118,119-133,134-141 2iub d2iubf1 F:83-93,97-103,104-118,119-133,134-141 53. d.338.1 Oxysterol-binding protein-like Oxysterol-binding protein-like core: large meander beta-sheet of 12 strands wrapped around the N-terminal (distorted) alpha-hairpin; some similarity to transmembrane beta-barrel proteins 1zi7 d1zi7c1 C:76-99,215-224,226-235,244-253,263-271 1zi7 d1zi7b1 B:76-98,217-224,226-234,244-253,263-271 1zi7 d1zi7b1 B:76-98,244-253,263-271,273-280,286-292 1zi7 d1zi7c1 C:76-99,244-253,263-271,273-280,286-292 1zi7 d1zi7a1 A:76-99,244-253,263-271,273-280,286-292 1zi7 d1zi7a1 A:76-99,212-224,226-234,244-253,263-271 1zht d1zhta1 A:76-105,241-253,263-271,273-280,286-292 1zhw d1zhwa1 A:76-105,241-253,263-271,273-280,286-292 1zhz d1zhza1 A:76-105,241-253,263-271,273-280,286-292 1zhy d1zhya1 A:76-105,243-253,263-271,273-280,286-292 1zhx d1zhxa1 A:76-105,241-253,263-271,273-280,286-292 1zi7 d1zi7a1 A:76-99,176-190,191-205,212-224,226-234 1zhw d1zhwa1 A:76-105,209-224,226-236,241-253,263-271 1zhy d1zhya1 A:76-105,209-224,226-236,243-253,263-271 1zht d1zhta1 A:76-105,209-224,226-236,241-253,263-271 1zhx d1zhxa1 A:76-105,209-224,226-236,241-253,263-271 1zi7 d1zi7b1 B:76-98,175-190,191-206,217-224,226-234 1zhz d1zhza1 A:76-105,209-224,226-237,241-253,263-271 1zi7 d1zi7a1 A:76-99,146-156,157-172,176-190,191-205 1zi7 d1zi7c1 C:76-99,146-156,157-173,175-190,191-198 1zi7 d1zi7c1 C:76-99,175-190,191-198,215-224,226-235 1zi7 d1zi7b1 B:76-98,146-156,157-173,175-190,191-206 1zhz d1zhza1 A:76-105,146-156,157-173,175-190,191-205 1zhy d1zhya1 A:76-105,146-156,157-173,175-190,191-205 1zhw d1zhwa1 A:76-105,146-156,157-173,175-190,191-205 1zhx d1zhxa1 A:76-105,146-156,157-173,175-190,191-205 1zht d1zhta1 A:76-105,146-156,157-173,175-190,191-205 1zhw d1zhwa1 A:76-105,175-190,191-205,209-224,226-236 1zhx d1zhxa1 A:76-105,175-190,191-205,209-224,226-236 1zhy d1zhya1 A:76-105,175-190,191-205,209-224,226-236 1zht d1zhta1 A:76-105,175-190,191-205,209-224,226-236 1zhz d1zhza1 A:76-105,175-190,191-205,209-224,226-237 55. d.289.1 WWE domain WWE domain beta(2)-alpha-beta(4); antiparallel folded beta-sheet (half-barrel), order 216543 1ujr d1ujra_ A:44-58,60-67,68-75,78-83,88-98 2a90 d2a90a2 A:150-164,166-171,178-184,185-191,195-204 2a90 d2a90a1 A:61-75,77-81,91-96,97-102,114-122 56. d.370.1 BTG domain-like BTG domain-like alpha(2)-beta-alpha(2)-beta(3); four-helical bundle, capped at one end by an antiparallel beta-sheet, order:1234 2z15 d2z15d1 D:30-50,66-70,98-105,106-113,115-124 2z15 d2z15c1 C:30-50,66-70,98-105,106-113,115-124 2z15 d2z15b1 B:30-53,66-70,98-105,106-113,115-124 3e9v d3e9va1 A:32-55,68-72,100-107,108-115,117-126 2d5r d2d5rb1 B:45-65,81-85,113-120,121-128,130-139 2z15 d2z15a1 A:30-53,66-70,98-105,106-113,115-124 58. b.61.4 Quinohemoprotein amine dehydrogenase A chain, domain 3 Streptavidin-like barrel, closed; n=8, S=10; meander 1jmx d1jmxa5 A:75-84,221-234,236-245,246-257,258-267 1jmz d1jmza5 A:75-84,221-234,236-245,246-257,258-267 1jju d1jjua5 A:74-83,212-225,227-236,237-248,249-258 1pby d1pbya5 A:74-83,212-225,227-236,237-248,249-258 59. b.28.1 Baculovirus p35 protein has a few helices inserted in loops ! Baculovirus p35 protein sandwich; 14 strands in 2 sheets; greek-key 1p35 d1p35a_ A:60-79,227-237,238-242,268-274,275-284 1i3p d1i3pa_ A:60-76,227-235,239-250,260-274,275-284 1p35 d1p35b_ B:60-79,227-236,238-252,258-274,275-284 1i3s d1i3sb_ B:60-79,227-237,238-242,258-274,275-284 1i3s d1i3sc_ C:60-79,227-237,238-242,258-274,275-284 1i3s d1i3sa_ A:60-79,227-237,238-252,268-274,275-284 1i3s d1i3sb_ B:60-79,227-237,242-252,258-274,275-284 1i3s d1i3sc_ C:60-79,227-237,242-252,258-274,275-284 1p35 d1p35c_ C:62-79,226-237,238-254,256-274,275-284 1i3s d1i3sa_ A:60-79,227-237,238-252,258-268,275-284 2fun d2func1 C:1060-1079,1227-1237,1242-1252,1258-1268,1275-1284 1p35 d1p35a_ A:60-79,227-237,242-252,258-268,275-284 62. d.243.1 Colicin D/E5 nuclease domain Colicin D/E5 nuclease domain alpha(2)-beta(4)-alpha, 2 layers: alpha/beta, antiparallel beta sheet, meander 2a8k d2a8kc1 C:28-39,41-50,57-70,71-79,80-87 2a8k d2a8kd1 D:28-39,41-50,57-70,71-79,80-87 2a8k d2a8kb1 B:28-39,41-50,57-70,71-79,80-87 2a8k d2a8ka1 A:28-39,41-50,57-70,71-79,80-87 2a8k d2a8kc1 C:15-26,41-50,57-70,71-79,80-87 2a8k d2a8kd1 D:15-26,41-50,57-70,71-79,80-87 2a8k d2a8kb1 B:15-26,41-50,57-70,71-79,80-87 2a8k d2a8ka1 A:15-26,41-50,57-70,71-79,80-87 2dfx d2dfxe1 E:23-34,49-57,67-78,79-87,88-95 2djh d2djha1 A:23-34,49-59,71-78,79-87,88-95 65. b.178.1 PA1994-like Spiral beta-roll a large 15-stranded beta-sheet rolled about a single helix core; overlapping edges form a sandwich-like structure; topological similarity to the LolA-like fold (scop_cf 89391) 2h1t d2h1tb1 B:107-119,122-134,139-151,153-160,165-173 2h1t d2h1ta1 A:107-119,123-134,139-151,153-160,165-173 2h1t d2h1tb1 B:107-119,153-160,165-173,175-181,183-187 2h1t d2h1ta1 A:107-119,153-160,165-173,175-181,183-187 74. d.171.1 Fibrinogen C-terminal domain-like Fibrinogen C-terminal domain-like unusual fold 1m1j d1m1jf1 F:152-160,163-170,177-186,188-198,380-389 1fze d1fzeb1 B:210-218,221-228,235-243,247-252,448-457 1fza d1fzab1 B:210-218,221-228,235-243,247-252,448-457 1fza d1fzae1 E:210-218,221-228,235-243,247-252,448-457 1fzc d1fzcf1 F:152-160,163-170,177-186,188-198,380-389 1fze d1fzee1 E:210-218,221-228,235-243,247-252,447-457 1ltj d1ltjc1 C:152-160,163-170,177-186,188-198,380-389 1rf1 d1rf1f1 F:152-160,163-170,177-186,188-198,380-389 1fzc d1fzcc1 C:152-160,163-170,177-186,188-198,380-389 1n73 d1n73e1 E:231-239,242-249,256-264,268-273,467-476 2oyh d2oyhc1 C:152-160,163-170,177-186,188-198,380-389 1m1j d1m1jc1 C:152-160,163-170,177-186,188-194,379-389 1n73 d1n73b1 B:231-239,242-249,256-264,268-273,467-476 1n8e d1n8ec1 C:152-160,163-170,177-186,188-198,380-389 1lwu d1lwuk1 K:231-239,242-249,256-264,268-273,467-476 1fza d1fzac1 C:152-160,163-170,177-186,188-198,380-389 1fza d1fzaf1 F:152-160,163-170,177-186,188-198,380-389 1lwu d1lwub1 B:231-239,242-249,256-264,268-273,467-476 1lwu d1lwue1 E:231-239,242-249,256-264,268-273,467-476 1n8e d1n8ef1 F:152-160,163-170,177-186,188-198,380-389 1fzg d1fzgc1 C:152-160,163-170,177-186,188-194,380-389 1lwu d1lwuc1 C:153-161,164-171,178-187,188-194,377-387 1lwu d1lwuf1 F:153-161,164-171,178-187,188-194,377-387 1lwu d1lwul1 L:153-161,164-171,178-187,188-194,377-387 1fic d1fica_ A:152-160,163-170,177-186,188-194,380-389 3fib d3fiba_ A:152-160,163-170,177-186,188-194,380-389 1lwu d1lwui1 I:153-161,164-171,178-187,188-194,377-387 1n73 d1n73c1 C:153-161,164-171,178-187,188-194,378-387 1fib d1fiba_ A:152-160,163-170,177-186,188-194,380-389 1n73 d1n73f1 F:153-161,164-171,178-187,188-194,378-387 2oyi d2oyic1 C:152-160,163-170,177-186,188-198,380-389 2fib d2fiba_ A:152-160,163-170,177-186,188-194,380-389 1fid d1fida_ A:152-160,163-170,177-186,188-194,380-389 1n86 d1n86c1 C:152-160,163-170,177-186,188-194,380-389 1n86 d1n86f1 F:152-160,163-170,177-186,188-194,380-389 1n8e d1n8eb1 B:210-218,221-229,235-243,246-252,448-457 1fzf d1fzfc1 C:152-160,163-170,177-186,188-194,380-389 1fze d1fzec1 C:152-160,163-170,177-186,188-194,380-389 1ltj d1ltjf1 F:152-160,163-170,177-186,188-194,379-389 1fze d1fzef1 F:152-160,163-170,177-186,188-194,380-389 1fzb d1fzbf1 F:152-160,163-170,177-186,188-194,380-389 1fzg d1fzgf1 F:152-160,163-170,177-186,188-194,380-389 1n8e d1n8ee1 E:210-218,221-229,235-243,246-252,447-457 1fzf d1fzff1 F:152-160,163-170,177-186,188-194,379-389 1fzb d1fzbc1 C:152-160,163-170,177-186,188-194,379-389 1lt9 d1lt9c1 C:152-160,163-170,177-186,188-194,380-389 75. c.146.1 YgbK-like YgbK-like consists of two domains with partial topological similarity to the P-loop kinases but without the P-loop motif; the domain association results in the formation of a single mixed beta-sheet of 15 strands 1yzy d1yzyb1 B:7-22,24-30,367-375,379-385,389-395 1yzy d1yzya1 A:7-22,24-30,367-375,379-385,389-395 76. d.96.2 ApbE-like duplication: contains two differently decorated beta(2)-alpha(2)-beta(2) subdomains, similar to other T-fold domains; probably does not form the tunnel-shaped oligomers ! T-fold beta(2)-alpha(2)-beta(2); 2 layers: alpha/beta; antiparallel sheet 1234 ! tunnel-shaped: its known members form wide oligomeric barrels different sizes 1vrm d1vrma1 A:188-210,212-219,220-226,255-262,288-297 2o34 d2o34a1 A:99-117,122-128,129-137,160-169,183-190 2o34 d2o34a1 A:99-117,160-169,183-190,227-235,236-243 78. d.110.1 Profilin (actin-binding protein) alpha-beta(2)-alpha-beta(5)-alpha ! Profilin-like core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha 3nul d3nula_ A:43-57,64-68,69-79,81-88,89-98 1cqa d1cqaa_ A:45-59,66-70,71-81,83-90,91-100 1a0k d1a0ka_ A:43-57,64-68,69-79,81-88,89-98 1d1j d1d1jd_ D:43-52,62-66,67-76,83-93,94-106 1cjf d1cjfa_ A:43-52,62-66,67-76,83-93,94-106 1g5u d1g5ub_ B:2043-2057,2064-2068,2069-2079,2080-2088,2089-2098 1g5u d1g5ua_ A:1043-1057,1064-1068,1069-1079,1080-1088,1089-1098 1d1j d1d1jc_ C:43-52,62-66,67-76,83-93,94-106 1ypr d1ypra_ A:38-52,59-63,64-70,75-82,83-92 1prq d1prqa_ A:38-52,59-63,64-70,75-82,83-92 2acg d2acga_ A:38-52,59-63,64-70,75-82,83-92 1hlu d1hlup_ P:43-52,62-66,67-76,83-90,97-106 1f2k d1f2ka_ A:1038-1052,1059-1063,1064-1070,1075-1082,1083-1092 1f2k d1f2kb_ B:2038-2052,2059-2063,2064-2070,2075-2082,2083-2092 2pbd d2pbdp1 P:43-52,62-66,67-76,83-90,97-106 1fil d1fila_ A:43-52,62-66,67-76,83-90,97-106 1pfl d1pfla_ A:43-52,62-66,67-76,83-93,94-106 2pav d2pavp1 P:43-52,62-66,67-76,83-90,97-106 3chw d3chwp1 P:43-52,62-66,67-76,83-90,97-106 1acf d1acfa_ A:38-52,59-63,64-70,75-82,83-92 1fik d1fika_ A:43-52,62-66,67-76,83-90,97-106 1ypr d1yprb_ B:38-52,59-63,64-70,75-82,83-92 1cf0 d1cf0b_ B:43-52,62-66,67-73,82-90,97-106 1awi d1awia_ A:43-52,62-66,67-73,83-90,98-106 1awi d1awib_ B:43-52,62-66,67-73,82-90,97-106 86. f.7.1 Lipovitellin-phosvitin complex; beta-sheet shell regions Lipovitellin-phosvitin complex; beta-sheet shell regions contains several large open beta-sheets 1lsh d1lsha3 A:543-558,636-648,655-667,668-680,737-746 1lsh d1lsha3 A:507-526,636-648,655-667,668-680,737-746 1lsh d1lsha2 A:120-136,169-179,207-222,223-239,247-264 1lsh d1lsha3 A:322-340,814-837,854-874,883-905,918-931 1lsh d1lsha3 A:120-136,791-812,814-837,874-878,879-883 1lsh d1lsha3 A:120-136,187-191,791-812,814-837,874-878 88. f.9.1 Perfringolysin Perfringolysin 2 domains: (1) alpha+beta; (2) all-beta, similar to the CalB domain fold but the two last strands are transposed 1m3i d1m3ia_ A:150-170,177-186,219-236,267-284,316-324 1m3i d1m3ib_ B:150-170,177-186,219-236,267-284,316-324 1m3i d1m3ic_ C:150-170,177-186,219-236,267-284,316-325 1pfo d1pfoa_ A:150-170,177-186,219-236,267-284,316-325 89. b.143.1 NAC domain NAC domain core: twisted 7-stranded beta-sheet (half-barrel) 1ut4 d1ut4a_ A:55-64,87-91,92-98,108-123,131-140 1ut7 d1ut7b_ B:55-64,87-91,92-98,108-123,131-140 1ut4 d1ut4b_ B:55-64,87-91,92-98,108-123,131-140 1ut7 d1ut7a_ A:55-64,87-91,92-98,108-123,131-140 97. d.127.1 Creatinase/aminopeptidase Creatinase/aminopeptidase duplication: composed of two very similar alpha+beta folds 2adu d2adua2 A:162-187,329-333,358-370,453-466,467-472 1r5g d1r5ga2 A:162-187,329-333,358-370,453-466,467-472 1yw7 d1yw7a2 A:162-187,329-333,358-370,453-466,467-472 1r5h d1r5ha2 A:162-187,329-333,358-370,453-466,467-472 2ea2 d2ea2a2 A:162-187,329-333,358-370,453-466,467-472 2ea4 d2ea4a2 A:162-187,329-333,358-370,453-466,467-472 1r58 d1r58a2 A:162-187,329-333,358-370,453-466,467-472 1kq0 d1kq0a2 A:162-187,329-333,358-370,453-466,467-472 2ga2 d2ga2a2 A:162-187,329-333,358-370,453-466,467-472 1yw9 d1yw9a2 A:162-187,329-333,358-370,453-466,467-472 1yw8 d1yw8a2 A:162-187,329-333,358-370,453-466,467-472 1qzy d1qzya2 A:162-187,329-333,358-370,453-466,467-472 1kq9 d1kq9a2 A:162-187,329-333,358-370,453-466,467-472 2oaz d2oaza2 A:162-187,329-333,358-370,453-466,467-472 1bn5 d1bn5a2 A:162-187,329-333,358-370,453-466,467-472 1b6a d1b6aa2 A:162-187,329-333,358-370,453-466,467-472 1boa d1boaa2 A:162-187,329-333,358-370,453-466,467-472 1b59 d1b59a2 A:162-187,329-333,358-370,453-466,467-472 1pv9 d1pv9b2 B:126-152,282-286,306-317,323-334,335-341 1xgn d1xgnb2 B:2-25,151-155,181-193,274-287,288-293 2p99 d2p99a1 A:119-140,197-210,229-242,243-249,258-262 2gu5 d2gu5b1 B:119-140,198-210,229-242,243-248,258-262 2evm d2evma1 A:119-140,197-210,229-242,243-249,258-262 2evc d2evca1 A:119-140,198-210,229-242,243-248,258-262 2gu6 d2gu6b1 B:119-140,198-210,229-242,243-249,258-262 2gtx d2gtxa1 A:119-140,198-210,229-242,243-248,258-262 2gu4 d2gu4b1 B:119-140,198-210,229-242,243-248,258-262 2evo d2evob1 B:119-140,198-210,229-242,243-249,258-262 2gu7 d2gu7b1 B:119-140,197-210,229-242,243-248,258-262 2q92 d2q92a1 A:119-140,197-210,229-242,243-248,258-262 2evo d2evoa1 A:119-140,198-210,229-242,243-249,258-262 2gtx d2gtxb1 B:119-140,198-210,229-242,243-249,258-262 2q94 d2q94a1 A:119-140,197-210,229-242,243-248,258-262 2q95 d2q95a1 A:119-140,198-210,229-242,243-248,258-262 4mat d4mata_ A:119-140,198-210,229-242,243-249,258-262 2q93 d2q93a1 A:119-140,198-210,229-242,243-249,258-262 2bb7 d2bb7a1 A:119-140,197-210,229-242,243-249,258-262 2gu6 d2gu6a1 A:119-140,198-210,229-242,243-249,258-262 1xnz d1xnza_ A:119-140,198-210,229-242,243-248,258-262 2gu4 d2gu4a1 A:119-140,198-210,229-242,243-248,258-262 2gg0 d2gg0a1 A:119-140,197-210,229-242,243-249,258-262 2ggc d2ggca1 A:120-140,197-210,229-242,243-248,258-262 2gu7 d2gu7a1 A:119-140,197-210,229-242,243-248,258-262 2gg9 d2gg9a1 A:119-140,197-210,229-242,243-248,258-262 3d27 d3d27a1 A:119-140,198-210,229-242,243-249,258-262 1yvm d1yvma1 A:119-140,197-210,229-242,243-249,258-262 2gu5 d2gu5a1 A:119-140,198-210,229-242,243-248,258-262 1xgs d1xgsa2 A:2-25,151-155,181-193,274-287,288-293 2p9a d2p9aa1 A:119-140,197-210,229-242,243-248,258-262 2p98 d2p98a1 A:119-140,198-210,229-242,243-249,258-262 2gg2 d2gg2a1 A:119-140,198-210,229-242,243-249,258-262 1xgs d1xgsb2 B:2-25,151-155,181-193,274-287,288-293 2gg8 d2gg8a1 A:119-140,197-210,229-242,243-249,258-262 2gg7 d2gg7a1 A:119-140,197-210,229-242,243-249,258-262 2q96 d2q96a1 A:119-140,198-210,229-242,243-248,258-262 3mat d3mata_ A:119-140,197-210,229-242,243-249,258-262 2gg3 d2gg3a1 A:119-140,198-210,229-242,243-248,258-262 2mat d2mata_ A:119-140,197-210,229-242,243-249,258-262 1c23 d1c23a_ A:119-140,197-210,229-242,243-248,258-262 1c24 d1c24a_ A:119-140,197-210,229-242,243-248,258-262 1c21 d1c21a_ A:119-140,197-210,229-242,243-249,258-262 1c27 d1c27a_ A:119-140,197-210,229-242,243-249,258-262 1c22 d1c22a_ A:119-140,197-210,229-242,243-248,258-262 1kp0 d1kp0a2 A:159-184,320-325,351-363,369-382,383-389 2gg5 d2gg5a1 A:119-140,198-210,229-242,243-248,258-262 1kp0 d1kp0b2 B:159-184,320-325,351-363,369-382,383-389 1xgm d1xgmb2 B:2-25,151-155,180-193,274-287,288-293 2ggb d2ggba1 A:119-140,198-210,229-242,243-248,258-262 1xgo d1xgoa2 A:2-25,151-155,182-192,274-287,288-293 1xgm d1xgma2 A:2-25,151-155,181-193,274-287,288-293 1chm d1chma2 A:160-185,321-326,352-364,370-383,384-390 1xgn d1xgna2 A:2-25,151-155,181-193,274-287,288-294 1chm d1chmb2 B:160-186,321-326,352-364,370-383,384-390 1o0x d1o0xa_ A:11-37,172-176,201-213,232-245,246-251 1mat d1mata_ A:119-141,197-210,229-242,243-248,258-262 1pv9 d1pv9a2 A:126-152,281-287,307-319,321-334,335-341 2gu7 d2gu7a1 A:7-33,169-173,197-210,229-242,243-248 1m35 d1m35a2 A:177-202,352-357,377-390,399-413,414-420 2p99 d2p99a1 A:7-33,169-173,197-210,229-242,243-249 2bh3 d2bh3a2 A:177-202,352-357,377-390,399-413,414-420 2gu5 d2gu5b1 B:7-33,169-173,198-210,229-242,243-248 1w2m d1w2ma2 A:177-202,352-357,377-390,399-413,414-420 1m35 d1m35b2 B:177-202,352-357,377-390,399-413,414-420 1m35 d1m35c2 C:177-202,352-357,377-390,399-413,414-420 1m35 d1m35f2 F:177-202,352-357,377-390,399-413,414-420 1w2m d1w2mb2 B:177-202,352-357,377-390,399-413,414-420 1w2m d1w2me2 E:177-202,352-357,377-390,399-413,414-420 1w2m d1w2mf2 F:177-202,352-357,377-390,399-413,414-420 1m35 d1m35d2 D:177-202,352-357,377-390,399-413,414-420 1m35 d1m35e2 E:177-202,352-357,377-390,399-413,414-420 1xnz d1xnza_ A:7-33,169-173,198-210,229-242,243-248 1wlr d1wlra2 A:177-202,352-357,377-390,399-413,414-420 1wbq d1wbqc2 C:177-202,352-357,377-390,399-413,414-420 1w2m d1w2md2 D:177-202,352-357,377-390,399-413,414-420 1w2m d1w2mc2 C:177-202,352-357,377-390,399-413,414-420 2evo d2evoa1 A:7-33,169-173,198-210,229-242,243-249 2bn7 d2bn7a2 A:177-202,352-357,377-390,399-413,414-420 2bha d2bhaa2 A:177-202,352-357,377-390,399-413,414-420 2bwt d2bwta2 A:177-202,352-357,377-390,399-413,414-420 2gg9 d2gg9a1 A:7-33,169-173,197-210,229-242,243-248 1w7v d1w7vc2 C:177-202,352-357,377-390,399-413,414-420 2gu4 d2gu4b1 B:7-33,169-173,198-210,229-242,243-248 1wbq d1wbqa2 A:177-202,352-357,377-390,399-413,414-420 2gu6 d2gu6b1 B:7-33,169-173,198-210,229-242,243-249 1wbq d1wbqb2 B:177-202,352-357,377-390,399-413,414-420 1wbq d1wbqd2 D:177-202,352-357,377-390,399-413,414-420 2bwx d2bwxa2 A:177-202,352-357,377-390,399-413,414-420 2gg7 d2gg7a1 A:7-33,169-173,197-210,229-242,243-249 2bhc d2bhca2 A:177-202,352-357,377-390,399-413,414-420 2v3z d2v3za2 A:177-202,352-357,377-390,399-413,414-420 1w7v d1w7vd2 D:177-202,352-357,377-390,399-413,414-420 2evc d2evca1 A:7-33,169-173,198-210,229-242,243-248 2q93 d2q93a1 A:7-33,169-173,198-210,229-242,243-249 1n51 d1n51a2 A:177-202,352-357,377-390,399-413,414-420 2p9a d2p9aa1 A:7-33,169-173,197-210,229-242,243-248 2gg2 d2gg2a1 A:7-33,169-173,198-210,229-242,243-249 1wl9 d1wl9a2 A:177-202,352-357,377-390,399-413,414-420 3d27 d3d27a1 A:7-33,169-173,198-210,229-242,243-249 2evm d2evma1 A:7-33,169-173,197-210,229-242,243-249 2v3x d2v3xa2 A:177-202,352-357,377-390,399-413,414-420 2gg0 d2gg0a1 A:7-33,169-173,197-210,229-242,243-249 2bws d2bwsa2 A:177-202,352-357,377-390,399-413,414-420 1wl6 d1wl6a2 A:177-202,352-357,377-390,399-413,414-420 2gg3 d2gg3a1 A:7-33,169-173,198-210,229-242,243-248 2bhd d2bhda2 A:177-202,352-357,377-390,399-413,414-420 2gtx d2gtxa1 A:7-33,169-173,198-210,229-242,243-248 1w7v d1w7vb2 B:177-202,352-357,377-390,399-413,414-420 2bww d2bwwa2 A:177-202,352-357,377-390,399-413,414-420 2p98 d2p98a1 A:7-33,169-173,198-210,229-242,243-249 2gu7 d2gu7b1 B:7-33,169-173,197-210,229-242,243-248 2q92 d2q92a1 A:7-33,169-173,197-210,229-242,243-248 2gtx d2gtxb1 B:7-33,169-173,198-210,229-242,243-249 2v3y d2v3ya2 A:177-202,352-357,377-390,399-413,414-420 1c23 d1c23a_ A:7-33,169-173,197-210,229-242,243-248 2q96 d2q96a1 A:7-33,169-173,198-210,229-242,243-248 1w7v d1w7va2 A:177-202,352-357,377-390,399-413,414-420 2bwv d2bwva2 A:177-202,352-357,377-390,399-413,414-420 2q94 d2q94a1 A:7-33,169-173,197-210,229-242,243-248 2bhb d2bhba2 A:177-202,352-357,377-390,399-413,414-420 2bwu d2bwua2 A:177-202,352-357,377-390,399-413,414-420 2mat d2mata_ A:7-33,169-173,197-210,229-242,243-249 2q95 d2q95a1 A:7-33,169-173,198-210,229-242,243-248 4mat d4mata_ A:7-33,169-173,198-210,229-242,243-249 1yvm d1yvma1 A:7-33,169-173,197-210,229-242,243-249 3mat d3mata_ A:7-33,169-173,197-210,229-242,243-249 2evo d2evob1 B:7-33,169-173,198-210,229-242,243-249 2ggc d2ggca1 A:7-33,169-173,197-210,229-242,243-248 1c22 d1c22a_ A:7-33,169-173,197-210,229-242,243-248 2bb7 d2bb7a1 A:7-33,169-173,197-210,229-242,243-249 1c24 d1c24a_ A:7-33,169-173,197-210,229-242,243-248 2ggb d2ggba1 A:7-33,169-173,198-210,229-242,243-248 2bwy d2bwya2 A:177-202,352-357,377-390,399-413,414-420 2gu4 d2gu4a1 A:7-33,169-173,198-210,229-242,243-248 2gg8 d2gg8a1 A:7-33,169-173,197-210,229-242,243-249 1c27 d1c27a_ A:7-33,169-173,197-210,229-242,243-249 1c21 d1c21a_ A:7-33,169-173,197-210,229-242,243-249 2gu5 d2gu5a1 A:7-33,169-173,198-210,229-242,243-248 1jaw d1jawa2 A:177-202,352-357,377-390,399-413,414-420 2gu6 d2gu6a1 A:7-33,169-173,198-210,229-242,243-249 1mat d1mata_ A:7-33,169-173,197-210,229-242,243-248 1a16 d1a16a2 A:177-202,352-357,377-390,399-413,414-420 108. f.4.5 Autotransporter forms (12,14) barrel; contains a long alpha-helix running along the barrel axis ! Transmembrane beta-barrels not a true fold, gathers together transmembrane barrels of different (n,S) 1uyn d1uynx_ X:787-815,818-835,836-855,857-874,875-893 1uyo d1uyox_ X:785-814,818-833,838-854,857-874,875-893 1uyn d1uynx_ X:787-815,999-1013,1041-1054,1056-1069,1070-1084 1uyo d1uyox_ X:785-814,999-1013,1040-1054,1056-1069,1070-1084 1uyo d1uyox_ X:785-814,857-874,875-893,896-916,920-942 1uyn d1uynx_ X:787-815,857-874,875-893,896-916,920-942 1uyn d1uynx_ X:787-815,896-916,920-942,947-967,974-997 1uyo d1uyox_ X:785-814,896-916,920-942,946-967,974-996 1uyn d1uynx_ X:787-815,947-967,974-997,999-1013,1041-1054 1uyo d1uyox_ X:785-814,946-967,974-996,999-1013,1040-1054