1. d.185.1 LuxS/MPP-like metallohydrolase Share the same "active site motif" HxxEH located in the first core helix, but differ in one of the zinc-binding residues !
LuxS/MPP-like metallohydrolase core: beta-alpha-beta(2)-alpha(2); 2 layers: alpha/beta
1q2l d1q2la2 A:652-667,742-750,754-764,918-928,946-954
2. c.37.1 P-loop containing nucleoside triphosphate hydrolases division into families based on beta-sheet topologies !
P-loop containing nucleoside triphosphate hydrolases 3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
1r8q d1r8qb_ B:3-10,17-24,54-59,60-66,164-180
1r8q d1r8qa_ A:3-10,17-24,54-59,60-66,164-180
1rrg d1rrgb_ B:2-13,17-25,51-59,60-68,164-180
1moz d1mozb_ B:2-13,18-25,52-60,61-67,165-183
1moz d1moza_ A:2-13,18-25,52-60,61-67,165-183
1hur d1hura_ A:2-13,17-25,51-59,60-68,164-181
1rrg d1rrga_ A:2-13,17-25,51-59,60-68,164-181
1hur d1hurb_ B:2-13,17-25,51-59,60-68,164-181
1z6x d1z6xa1 A:4-14,17-25,51-59,60-68,164-178
3. c.2.1 NAD(P)-binding Rossmann-fold domains
NAD(P)-binding Rossmann-fold domains core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456 ! The nucleotide-binding modes of this and the next two folds/superfamilies are similar
1u8f d1u8fp1 P:12-26,28-36,65-70,71-79,315-335
1znq d1znqo1 O:12-26,28-36,65-70,71-79,315-335
1znq d1znqr1 R:12-26,28-36,65-70,71-79,315-335
2vyv d2vyva1 A:9-23,25-32,61-66,67-74,311-329
1znq d1znqq1 Q:12-26,28-36,65-70,71-79,315-335
1znq d1znqp1 P:12-26,28-36,65-70,71-79,315-335
2vyn d2vyna1 A:9-23,25-32,61-66,67-74,311-329
1dc6 d1dc6b1 B:9-23,25-32,62-67,68-75,312-330
2vyn d2vynb1 B:9-23,25-32,61-66,67-74,311-329
1gad d1gado1 O:9-23,25-32,62-67,68-75,312-330
3cmc d3cmcp1 P:9-23,25-32,62-67,68-75,312-332
3dbv d3dbvo1 O:9-23,25-32,62-67,68-75,312-332
1dc4 d1dc4b1 B:9-23,25-32,62-67,68-75,312-330
1dc3 d1dc3a1 A:9-23,25-32,62-67,68-75,312-330
1s7c d1s7ca1 A:11-25,27-34,63-68,69-76,313-331
1u8f d1u8fo1 O:12-26,28-36,65-70,71-79,315-335
2b4t d2b4tr1 R:12-26,28-36,65-70,71-79,318-336
1dc4 d1dc4a1 A:9-23,25-32,62-67,68-75,312-330
3cmc d3cmcq1 Q:9-23,25-32,62-67,68-75,312-332
1dc3 d1dc3b1 B:9-22,25-32,62-67,68-75,312-330
1u8f d1u8fq1 Q:12-26,28-36,65-70,71-79,315-335
1gad d1gadp1 P:9-23,25-32,62-67,68-75,312-330
3cmc d3cmco1 O:9-23,25-32,62-67,68-75,312-332
1dc5 d1dc5b1 B:9-23,25-32,62-67,68-75,312-330
1j0x d1j0xp1 P:9-23,25-33,62-67,68-76,312-332
1j0x d1j0xq1 Q:9-23,25-33,62-67,68-76,312-332
1j0x d1j0xr1 R:9-23,25-32,62-67,68-75,312-332
1cer d1cerr1 R:9-23,26-32,62-67,68-75,312-332
1cer d1cerd1 D:9-23,26-32,62-67,68-75,312-332
1dbv d1dbvo1 O:9-23,25-32,62-67,68-75,312-332
1gae d1gaeo1 O:9-23,25-32,62-67,68-75,312-330
2dbv d2dbvr1 R:9-23,25-32,62-67,68-75,312-332
2g82 d2g82r1 R:9-23,25-31,60-65,66-73,310-330
2dbv d2dbvo1 O:9-23,25-32,62-67,68-75,312-332
1nqo d1nqoc1 C:9-23,25-32,62-67,68-75,312-332
3cmc d3cmcr1 R:9-23,25-32,62-67,68-75,312-332
1nq5 d1nq5c1 C:9-23,25-32,62-67,68-75,312-332
2vyv d2vyvb1 B:9-23,25-32,61-66,67-74,311-329
1gae d1gaep1 P:9-23,25-32,62-67,68-75,312-330
2b4r d2b4rr1 R:12-26,28-36,65-70,71-79,318-336
4dbv d4dbvr1 R:9-23,25-32,62-67,68-75,312-332
1gd1 d1gd1q1 Q:9-23,25-32,62-67,68-75,312-332
1jn0 d1jn0o1 O:9-22B,25-32,61-66,68-75,312-332
1jn0 d1jn0b1 B:9-22B,25-32,61-66,68-75,312-332
1jn0 d1jn0a1 A:9-22B,25-32,61-66,68-75,312-332
1npt d1nptp1 P:9-23,25-32,62-67,68-75,312-332
2g82 d2g82a1 A:9-23,25-31,60-65,66-73,310-330
1nqa d1nqaq1 Q:9-23,25-32,62-67,68-75,312-332
1dbv d1dbvr1 R:9-23,25-32,62-67,68-75,312-332
2gd1 d2gd1o1 O:9-23,25-32,62-67,68-75,312-332
2g82 d2g82b1 B:9-23,25-31,60-65,66-73,310-330
1j0x d1j0xo1 O:9-23,25-33,62-67,68-76,312-332
1nqo d1nqoo1 O:9-23,25-32,62-67,68-75,312-332
1gd1 d1gd1p1 P:9-23,25-32,62-67,68-75,312-332
4dbv d4dbvo1 O:9-23,25-32,62-67,68-75,312-332
4dbv d4dbvq1 Q:9-23,25-32,62-67,68-75,312-332
1cer d1cero1 O:9-23,26-32,62-67,68-75,312-332
1cer d1cera1 A:9-23,26-32,62-67,68-75,312-332
1npt d1nptq1 Q:9-23,25-32,62-67,68-75,312-332
3dbv d3dbvr1 R:9-23,25-32,62-67,68-75,312-332
2b4r d2b4ro1 O:12-26,28-36,65-70,71-79,318-336
1npt d1nptr1 R:9-23,25-32,62-67,68-75,312-332
1gd1 d1gd1o1 O:9-22,25-32,62-67,68-75,312-332
1nqa d1nqar1 R:9-23,25-32,62-67,68-75,312-332
2gd1 d2gd1q1 Q:9-23,25-32,62-67,68-75,312-332
2b4t d2b4to1 O:12-26,28-36,65-70,71-79,318-336
2b4t d2b4tp1 P:12-26,28-36,65-70,71-79,318-336
2b4r d2b4rp1 P:12-26,28-36,65-70,71-79,318-336
2pkq d2pkqp1 P:9-21,24-32,62-67,68-75,312-332
2b4t d2b4tq1 Q:12-26,28-35,65-70,71-78,318-336
2pkq d2pkqs1 S:9-21,24-32,62-67,68-75,312-332
1npt d1npto1 O:9-23,25-32,62-67,68-75,312-332
2gd1 d2gd1r1 R:9-23,25-32,62-67,68-75,312-332
2b4r d2b4rq1 Q:12-25,28-36,65-70,71-79,318-336
1rm3 d1rm3o1 O:9-20,24-32,62-67,68-75,312-332
1nbo d1nboa1 A:9-21,24-32,62-67,68-75,312-332
1dc6 d1dc6a1 A:9-23,25-32,62-67,68-75,312-330
1rm3 d1rm3a1 A:9-20,24-32,62-67,68-75,312-332
1nqo d1nqoq1 Q:9-23,24-32,62-67,68-75,312-332
2gd1 d2gd1p1 P:9-23,25-32,62-67,68-75,312-332
1rm4 d1rm4a1 A:9-20,24-32,62-67,68-75,312-332
1dc5 d1dc5a1 A:9-23,24-32,62-67,68-75,312-330
1nq5 d1nq5q1 Q:9-23,24-32,62-67,68-75,312-332
1ihx d1ihxc1 C:9-23,25-33,62-67,68-76,312-334
2pkr d2pkrc1 C:9-20,24-32,62-67,68-75,312-332
1ihx d1ihxd1 D:9-23,25-33,62-67,68-76,312-334
2pkr d2pkri1 I:9-20,24-32,62-67,68-75,312-332
2pkr d2pkro1 O:9-20,24-32,62-67,68-75,312-332
2pkr d2pkra1 A:9-20,24-32,62-67,68-75,312-332
1ihx d1ihxa1 A:9-23,25-33,62-67,68-76,312-334
2pkq d2pkqo1 O:9-20,24-32,62-67,68-75,312-332
2pkr d2pkrp1 P:9-20,24-32,62-67,68-75,312-332
2pkr d2pkrm1 M:9-20,24-32,62-67,68-75,312-332
1gd1 d1gd1r1 R:9-23,24-32,62-67,68-75,312-332
2pkr d2pkrh1 H:9-20,24-32,62-67,68-75,312-332
1rm4 d1rm4o1 O:9-20,24-32,62-67,68-75,312-332
2pkr d2pkrq1 Q:9-20,24-32,62-67,68-75,312-332
1nbo d1nboo1 O:9-20,24-32,62-67,68-75,312-332
2pkr d2pkrb1 B:9-20,24-32,62-67,68-75,312-332
2pkr d2pkrl1 L:9-20,24-32,62-67,68-75,312-332
2pkr d2pkrd1 D:9-20,24-32,62-67,68-75,312-332
1nqo d1nqoa1 A:9-23,24-32,62-67,68-75,312-332
3dbv d3dbvp1 P:9-23,24-32,62-67,68-75,312-332
2dbv d2dbvp1 P:9-23,24-32,62-67,68-75,312-332
2dbv d2dbvq1 Q:9-23,24-32,62-67,68-75,312-332
2pkr d2pkrr1 R:9-20,24-32,62-67,68-75,312-332
4dbv d4dbvp1 P:9-23,24-32,62-67,68-75,312-332
3dbv d3dbvq1 Q:9-23,24-32,62-67,68-75,312-332
1dbv d1dbvq1 Q:9-23,24-32,62-67,68-75,312-332
1dbv d1dbvp1 P:9-23,24-32,62-67,68-75,312-332
1rm5 d1rm5o1 O:9-20,24-32,62-67,68-75,312-332
1u8f d1u8fr1 R:12-26,27-36,65-70,71-79,315-335
1rm3 d1rm3b1 B:9-21,24-32,62-67,68-75,312-333
1obf d1obfo1 O:10-24,28-36,65-70,71-78,315-334
1obf d1obfp1 P:10-24,28-36,65-70,71-78,315-334
1ywg d1ywgp1 P:12-25,27-36,65-70,71-79,318-337
1ywg d1ywgr1 R:12-25,27-36,65-70,71-79,318-337
1ywg d1ywgo1 O:12-25,27-36,65-70,71-79,318-337
1ywg d1ywgq1 Q:12-25,27-36,65-70,71-79,318-337
4gpd d4gpd11 1:8-23,25-31,61-66,68-74,311-333
List of motif hits that are not present in SCOP but are found in PDB for pattern ID: 984 (enumeration index: query764) of S5
2g54 A:677-692,773-784,788-800,950-961,994-1002
3aq4 B:4-13,17-25,51-59,60-68,164-180
3aq4 A:4-13,17-25,51-59,60-68,164-180
3lvf O:11-25,27-34,63-68,69-76,315-335
3e6a C:12-26,27-35,67-72,73-79,317-336
3e6a B:12-26,27-35,67-72,73-80,317-336
3cps B:26-40,42-50,80-84,85-93,333-353
3cps A:26-40,42-50,80-84,85-93,333-353
3lc7 P:11-25,26-35,63-68,69-77,315-334
3lc7 Q:11-25,27-34,63-68,69-76,315-333
2wk3 B:677-692,773-784,788-800,950-961,994-1003
3tuv A:677-692,773-784,788-800,950-961,994-1003
3lc1 Q:11-25,27-34,63-68,69-76,315-335
3cif B:11-25,27-35,64-69,70-78,318-338
3cif A:11-25,27-35,64-69,70-78,318-338
3cif D:11-25,27-35,64-69,70-78,318-338
3cif C:11-25,27-35,64-69,70-78,318-338
2x5j R:9-22A,24-32,62-67,68-75,312-332
2x5j O:9-22A,24-32,62-67,68-75,312-331
2x5j Q:9-22A,24-32,62-67,68-75,312-331
2jg4 A:677-692,773-784,788-800,950-961,994-1003
2x5k P:9-22A,24-32,62-67,68-75,312-334
2x5k R:9-22A,24-32,62-67,68-75,312-333
2x5k O:9-22A,25-32,62-67,68-75,312-334
2x5k Q:9-22A,24-32,62-67,68-75,312-333
2jbu A:677-692,773-784,788-800,950-961,994-1003
3h44 B:677-692,773-784,787-800,950-961,994-1003
3sth A:11-25,26-35,64-69,70-78,318-339
3sth D:11-25,26-35,64-69,70-78,318-339
3sth C:11-25,26-35,64-69,70-78,318-339
3sth B:11-25,26-35,64-69,70-78,318-339
3n57 A:677-692,773-784,788-800,950-961,994-1003
3p7o A:677-692,773-784,787-800,950-961,994-1003
2g49 A:677-692,773-784,788-800,950-961,994-1002
2g47 B:677-692,773-784,788-800,950-961,994-1002
3k2b C:9-20,24-32,62-67,68-75,312-332
3k2b O:9-20,24-32,62-67,68-75,312-332
3k2b H:9-21,24-32,62-67,68-75,312-332
3k2b D:9-20,24-32,62-67,68-75,312-332
3k2b G:9-20,24-32,62-67,68-75,312-332
3k2b B:9-20,24-32,62-67,68-75,312-332
3k2b A:9-20,24-32,62-67,68-75,312-332
3e5r C:12-26,27-36,67-72,73-81,317-337
3e5r A:12-25,28-36,67-72,73-81,317-336
3e5r O:12-25,27-36,67-72,73-81,317-337
3e5r B:12-26,27-36,67-72,73-81,317-336
3e50 A:677-692,773-784,788-800,950-961,994-1003
3gnq F:10-24,28-36,65-70,71-78,315-334
3gnq C:10-24,28-36,65-70,71-78,315-334
3gnq E:10-24,28-36,65-70,71-78,315-334
3gnq A:10-24,28-36,65-70,71-78,315-334
3gnq D:10-24,28-36,65-70,71-77,315-334
3gnq H:10-24,28-36,65-70,71-78,315-334
3gnq B:10-24,28-36,65-70,71-78,315-334
3gnq G:10-24,28-36,65-70,71-78,315-334
3l6o R:11-25,26-34,63-68,69-76,315-334
1vsu D:11-25,26-35,64-69,70-78,318-338
1vsu C:11-25,27-35,64-69,70-78,318-338
1vsu A:11-25,27-35,64-69,70-78,318-338
1vsu B:11-25,27-35,64-69,70-78,318-338
3hq4 Q:11-25,27-34,63-68,69-76,315-334
3p7l A:677-692,773-784,787-800,950-961,994-1003
3hgz B:677-692,773-784,788-800,950-961,994-1003
2x77 A:7-16,20-27,55-62,63-69,167-184
2x77 B:7-16,20-28,56-62,63-71,167-183
2g48 A:677-692,773-784,788-800,950-961,994-1002
1vsv A:11-25,27-35,64-69,70-78,318-338
1vsv B:11-25,27-34,64-69,70-77,318-338
1vsv C:11-25,26-35,64-69,70-78,318-338
1vsv D:11-25,26-35,64-69,70-78,318-338
2ep7 B:11-22,26-34,63-68,69-76,321-340
2ep7 A:11-22,27-34,63-68,69-76,321-340
2xf8 A:9-22A,24-32,62-67,68-75,312-332
2xf8 M:9-22A,25-32,62-67,68-75,312-331
2xf8 I:9-22A,24-32,62-67,68-75,312-331
2xf8 F:9-22A,25-32,62-67,68-75,312-331
2xf8 K:9-22A,25-32,62-67,68-75,312-331
2xf8 D:9-22A,25-32,62-67,68-75,312-331
2xf8 O:9-22A,25-32,62-67,68-75,312-331
2xf8 C:9-22A,24-32,62-67,68-75,312-331
2xf8 G:9-22A,25-32,62-67,68-75,312-331
2xf8 E:9-22A,25-32,62-67,68-75,312-331
2xf8 N:9-22A,24-32,62-67,68-75,312-331