1. c.37.1 P-loop containing nucleoside triphosphate hydrolases division into families based on beta-sheet topologies !
P-loop containing nucleoside triphosphate hydrolases 3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
2dy1 d2dy1a2 A:7-16,63-72,73-82,260-272,344-352
1wdt d1wdta2 A:7-16,63-72,73-82,260-272,344-352
2dy1 d2dy1a2 A:7-16,63-72,73-82,260-272,328-333
1wdt d1wdta2 A:7-16,63-72,73-82,260-272,328-333
1efg d1efga2 A:11-19,68-75,76-83,268-280,371-379
1dar d1dara2 A:11-19,68-75,76-83,268-280,371-379
1elo d1eloa2 A:11-19,68-75,76-83,268-280,371-379
2bm0 d2bm0a2 A:11-19,68-75,76-83,267-280,371-379
2bm1 d2bm1a2 A:11-19,68-75,76-83,267-280,371-379
1ktv d1ktva2 A:11-19,68-75,76-83,268-280,371-379
1zm4 d1zm4a2 A:18-26,73-81,96-104,329-342,432-439
2npf d2npfb2 B:18-26,73-81,96-104,329-342,432-439
1zm3 d1zm3c2 C:18-26,73-81,96-104,329-342,432-439
1zm9 d1zm9a2 A:18-26,73-81,96-104,329-342,432-439
1zm4 d1zm4c2 C:18-26,73-81,96-104,329-342,432-439
1ktv d1ktvb2 B:11-19,68-75,76-83,268-280,371-379
1zm2 d1zm2a2 A:18-26,73-81,96-104,329-342,432-439
1zm2 d1zm2c2 C:18-26,73-81,96-104,329-342,432-439
1zm9 d1zm9c2 C:18-26,73-81,96-104,329-342,432-439
1n0u d1n0ua2 A:18-26,73-81,96-104,329-342,432-439
2npf d2npfb2 B:18-26,73-81,96-104,329-342,450-458
1n0v d1n0vd2 D:18-26,73-81,96-104,329-342,432-439
1n0v d1n0vc2 C:18-26,73-81,96-104,329-342,450-458
1zm3 d1zm3a2 A:18-26,73-81,96-104,329-342,450-458
2npf d2npfa2 A:18-26,73-81,96-104,329-342,450-458
2npf d2npfa2 A:18-26,73-81,96-104,329-342,432-439
1n0v d1n0vc2 C:18-26,73-81,96-104,329-342,432-439
1zm9 d1zm9a2 A:18-26,73-81,96-104,329-342,450-458
1zm9 d1zm9c2 C:18-26,73-81,96-104,329-342,450-458
1u2r d1u2ra2 A:18-26,73-81,96-104,329-342,432-439
1zm2 d1zm2a2 A:18-26,73-81,96-104,329-342,450-458
1n0u d1n0ua2 A:18-26,73-81,96-104,329-342,450-458
1zm3 d1zm3c2 C:18-26,73-81,96-104,329-342,450-458
1zm2 d1zm2c2 C:18-26,73-81,96-104,329-342,450-458
1zm4 d1zm4a2 A:18-26,73-81,96-104,329-342,450-458
1n0v d1n0vd2 D:18-26,73-81,96-104,329-342,450-458
1zm4 d1zm4c2 C:18-26,73-81,96-104,329-342,450-458
1wb3 d1wb3d3 D:5-12,51-57,58-64,161-177,243-247
1zm3 d1zm3e2 E:18-26,73-81,96-104,329-342,450-458
2e1r d2e1ra2 A:18-26,73-81,96-104,329-342,450-458
1zm2 d1zm2e2 E:18-26,73-81,96-104,329-342,450-458
1u2r d1u2ra2 A:18-26,73-81,96-104,329-342,450-458
1zm4 d1zm4e2 E:18-26,73-81,96-104,329-342,450-458
2bv3 d2bv3a2 A:11-19,68-75,76-83,267-280,371-379
1zm9 d1zm9e2 E:18-26,73-81,96-104,329-342,450-458
1wb2 d1wb2d3 D:5-12,51-57,58-64,160-177,243-247
1wb1 d1wb1d3 D:5-12,51-57,58-64,160-177,243-247
2e1r d2e1ra2 A:18-26,73-81,96-104,329-342,432-439
2p8x d2p8xt2 T:18-26,73-81,96-104,329-342,450-458
1g7r d1g7ra4 A:5-12,43-48,71-76,205-220,305-312
2p8z d2p8zt2 T:18-26,70-81,96-104,329-342,450-458
1g7s d1g7sa4 A:5-12,43-48,71-76,205-220,305-312
2p8y d2p8yt2 T:18-26,73-81,96-104,330-342,450-458
2p8w d2p8wt2 T:18-26,73-81,96-104,330-342,450-458
1wb3 d1wb3a4 A:3-12,49-57,58-66,161-177,246-252
2bvn d2bvnb3 B:9-18,65-72,73-81,181-200,270-279
1b23 d1b23p3 P:10-18,64-73,74-83,193-211,284-291
1ob2 d1ob2a3 A:9-18,63-72,73-82,181-200,272-279
1ha3 d1ha3a3 A:10-18,66-73,74-82,193-211,282-291
1ha3 d1ha3b3 B:10-18,66-73,74-82,193-211,282-291
1wb2 d1wb2a4 A:3-12,52-57,58-65,161-177,244-252
1ttt d1ttta3 A:10-18,65-73,74-82,193-211,284-291
1zc8 d1zc8y3 Y:10-18,65-73,74-82,193-211,284-291
1wb1 d1wb1a4 A:3-12,52-57,58-65,160-177,246-252
1ttt d1tttc3 C:10-18,65-73,74-82,193-211,284-291
2qn6 d2qn6a3 A:10-16,49-59,83-94,190-203,294-300
2pmd d2pmdb3 B:8-16,49-59,83-94,190-203,294-300
2plf d2plfa3 A:8-17,49-59,83-94,190-203,294-300
1wb1 d1wb1c4 C:3-12,52-57,58-65,161-176,244-254
1wb2 d1wb2b3 B:3-12,52-57,58-65,161-177,244-254
1wb1 d1wb1b3 B:3-12,52-57,58-65,160-177,244-254
2. c.138.1 Indigoidine synthase A-like
Indigoidine synthase A-like core: 3 layers, a/b/a; parallel beta-sheet of 7 strands, order 2134756
1vkm d1vkmc_ C:2-6,46-55,56-61,63-74,91-96
1vkm d1vkmf_ F:2-6,46-55,56-61,63-74,91-96
1vkm d1vkma_ A:2-6,46-55,56-61,63-74,91-96
1vkm d1vkmd_ D:2-6,46-55,56-61,63-74,91-96
1vkm d1vkmb_ B:2-6,46-55,56-61,63-74,91-96
1vkm d1vkme_ E:2-6,46-55,56-61,63-74,91-96
3. i.1.1 Ribosome and ribosomal fragments
Ribosome and ribosomal fragments
1s1h d1s1ht_ T:18-26,73-81,96-104,329-342,432-439
1jqm d1jqmb_ B:12-19,70-75,76-82,268-280,370-374
1s1h d1s1ht_ T:18-26,73-81,96-104,329-342,450-458
1jqm d1jqmb_ B:12-19,70-75,76-82,268-280,353-360
1mj1 d1mj1a_ A:10-18,65-73,74-82,193-211,282-291
1qzd d1qzda_ A:9-18,63-72,73-82,181-200,272-279
1jqm d1jqmb_ B:12-19,70-75,76-82,268-280,374-379
List of motif hits that are not present in SCOP but are found in PDB for pattern ID: 458 (enumeration index: query773.792.2314) of S5
3i1f B:9-16,49-59,83-94,190-203,293-300
3i1f A:9-16,49-59,83-94,190-203,294-300
3fih Z:10-18,62-72,73-82,181-200,210-220
3fih Z:10-18,62-72,73-82,181-200,272-279
2y14 Z:10-18,64-73,74-83,193-211,284-291
3b82 C:18-26,73-81,96-104,329-342,432-439
3b82 C:18-26,73-81,96-104,329-342,450-458
3b82 E:18-26,73-81,96-104,329-342,450-458
3b82 A:18-26,73-81,96-104,329-342,450-458
3b82 A:18-26,73-81,96-104,329-342,432-439
2y12 Z:10-18,64-73,74-83,193-211,284-291
2y16 Z:10-18,64-73,74-83,193-211,284-291
2y0u Z:10-18,64-73,74-83,193-211,282-291
3dny T:18-26,73-81,96-104,329-342,450-458
3dny T:18-26,73-81,96-104,329-342,432-439
3izv C:10-18,66-72,73-80,181-200,270-279
3p3m F:9-16,48-59,83-95,190-203,294-300
3p3m B:10-16,48-59,83-95,190-203,294-300
3p3m E:10-16,49-59,83-94,190-203,294-300
2o0f A:13-20,73-80,81-88,263-276,296-305
2wrq Z:10-18,67-73,74-81,193-211,283-291
2j7k A:11-19,68-75,76-83,268-280,371-379
2y0y Z:10-18,64-73,74-83,193-211,284-291
3zvo Y:12-20,73-77,82-88,263-276,361-368
3fic Z:10-18,66-73,74-82,193-211,282-291
3b8h A:18-26,73-81,96-104,329-342,450-458
3b8h A:18-26,73-81,96-104,329-342,432-439
3b8h E:18-26,73-81,96-104,329-342,450-458
3b8h C:18-26,73-81,96-104,329-342,432-439
3b8h C:18-26,73-81,96-104,329-342,450-458
3b78 C:18-26,73-81,96-104,329-342,450-458
3b78 E:18-26,73-81,96-104,329-342,450-458
3b78 C:18-26,73-81,96-104,329-342,432-439
3b78 A:18-26,73-81,96-104,329-342,432-439
3b78 A:18-26,73-81,96-104,329-342,450-458
3cw2 F:10-16,49-59,84-94,190-203,294-300
3cw2 E:9-16,49-59,83-94,190-203,294-300
3cw2 A:8-16,49-59,83-94,190-203,294-300
2wrn Z:10-18,67-73,74-81,193-211,283-291
3tr5 C:10-17,70-77,78-85,259-272,359-366
3tr5 B:10-17,70-77,78-85,259-272,358-366
3tr5 A:10-17,70-77,78-85,259-272,358-366
3tr5 D:10-17,70-77,78-85,259-272,358-366
3p27 A:166-174,235-243,244-252,376-395,470-480
3p27 B:166-174,235-243,244-252,376-395,470-480
2xqd Z:10-18,64-73,74-83,193-211,283-291
2y10 Z:10-18,64-73,74-83,193-211,282-291
2h5e B:13-20,73-80,81-88,263-276,361-369
2h5e A:13-20,73-80,81-88,263-276,361-370
3p26 B:166-174,234-243,244-253,376-395,470-480
2y18 Z:10-18,64-73,74-83,193-211,282-291
2y0w Z:10-18,64-73,74-83,193-211,282-291
3agj G:4-13,73-82,83-92,214-223,292-301
3agj C:5-13,73-82,83-92,214-222,292-301
3agj A:5-13,73-82,83-92,214-223,292-301
2rdo 7:9-17,66-73,81-88,273-286,379-387
2zit C:18-26,73-81,96-104,329-342,432-439
2zit E:18-26,73-81,96-104,329-342,450-458
2zit C:18-26,73-81,96-104,329-342,450-458
2zit A:18-26,73-81,96-104,329-342,432-439
2zit A:18-26,73-81,96-104,329-342,450-458