1. d.58.26 GHMP Kinase, C-terminal domain common fold is elaborated with additional secondary structures ! Ferredoxin-like alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2 1k47 d1k47b2 B:9-14,200-207,271-282,285-291,297-304 1k47 d1k47e2 E:9-14,200-207,271-282,285-291,297-304 1wuu d1wuua2 A:37-42,217-226,322-336,337-344,350-358 1wuu d1wuub2 B:37-42,217-226,322-336,337-344,350-358 1k47 d1k47f2 F:9-14,200-209,271-282,285-291,296-304 1k47 d1k47a2 A:9-14,200-209,271-282,285-291,296-304 2r42 d2r42a2 A:13-18,230-239,312-326,328-332,337-344 1k47 d1k47d2 D:9-14,200-209,271-282,285-291,296-304 1wuu d1wuud2 D:37-42,217-226,322-336,337-344,350-358 1wuu d1wuuc2 C:37-42,217-226,322-336,337-344,350-358 1k47 d1k47c2 C:9-14,200-209,271-282,285-291,296-304 1kvk d1kvka2 A:13-18,230-239,312-326,328-332,337-344 1s4e d1s4eh2 H:11-16,181-190,282-296,297-303,309-317 1pie d1piea2 A:35-41,214-222,324-338,339-346,352-360 1s4e d1s4ei2 I:11-16,181-190,282-296,297-303,309-317 1s4e d1s4ef2 F:11-16,181-190,282-296,297-303,309-317 1kkh d1kkha2 A:13-18,192-198,259-274,273-279,285-291 1s4e d1s4ee2 E:11-16,181-190,282-296,297-303,309-317 1s4e d1s4eb2 B:10-16,181-190,282-296,297-303,309-317 1s4e d1s4ed2 D:11-16,181-190,282-296,297-303,309-317 1vis d1visa2 A:8-13,187-193,254-269,268-274,280-286 1s4e d1s4ea2 A:10-16,181-190,282-296,297-303,309-317 1mg7 d1mg7a2 A:53-57,213-221,279-297,298-306,307-314 1mg7 d1mg7b2 B:53-57,213-221,279-297,298-306,307-314 1fi4 d1fi4a2 A:12-18,191-199,275-293,297-301,305-313 1s4e d1s4ec2 C:9-16,181-190,284-295,299-303,309-317 1fwk d1fwkb2 B:24-28,170-177,241-250,252-259,263-270 1fwl d1fwlb2 B:24-28,170-177,241-250,252-259,263-270 1h74 d1h74b2 B:24-28,170-177,241-250,252-259,263-270 1h74 d1h74d2 D:24-28,170-177,241-250,252-259,263-270 1fwl d1fwla2 A:24-28,170-177,241-250,252-259,263-270 1fwk d1fwka2 A:24-28,170-177,241-250,252-259,263-270 1h74 d1h74a2 A:24-28,170-177,241-250,252-259,263-270 1fwk d1fwkc2 C:24-28,170-177,241-250,252-259,263-270 1fwl d1fwld2 D:24-28,171-177,241-250,252-259,263-270 1h72 d1h72c2 C:24-28,170-177,241-250,252-259,263-270 1h74 d1h74c2 C:24-28,170-177,241-250,252-259,263-270 1fwk d1fwkd2 D:24-28,170-177,241-250,252-259,263-270 1fwl d1fwlc2 C:24-28,170-177,241-250,252-259,263-270 1h73 d1h73a2 A:24-28,170-177,241-250,252-259,263-270 1fi4 d1fi4a2 A:32-39,191-199,275-293,297-301,305-313 1wuu d1wuud2 D:49-56,217-226,322-336,337-344,350-358 1wuu d1wuuc2 C:49-56,217-226,322-336,337-344,350-358 1wuu d1wuua2 A:49-56,217-226,322-336,337-344,350-358 1wuu d1wuub2 B:49-56,217-226,322-336,337-344,350-358 1k47 d1k47f2 F:21-29,200-209,271-282,285-291,296-304 3. c.8.5 GroEL apical domain-like The "swivelling" beta/beta/alpha domain 3 layers: b/b/a; the central sheet is parallel, and the other one is antiparallel; there are some variations in topology ! this domain is thought to be mobile in most multi-domain proteins known to contain it 1q3s d1q3sb2 B:212-217,217-223,317-329,348-356,357-365 1q3r d1q3rb2 B:212-217,217-223,317-329,348-356,357-365 1q3s d1q3sf2 F:212-217,217-223,317-329,348-356,357-365 1q3s d1q3sc2 C:212-217,217-223,317-329,348-356,357-365 1q3s d1q3sa2 A:212-217,217-222,317-329,348-356,357-365 1q3r d1q3ra2 A:212-217,217-223,317-329,348-356,357-365 1q3s d1q3sg2 G:212-217,217-223,317-329,348-356,357-365 1q3s d1q3sh2 H:212-217,217-223,317-329,348-356,357-365 1q2v d1q2vb2 B:212-217,217-222,317-329,348-356,357-365 1q3s d1q3sd2 D:212-217,217-222,317-329,348-356,357-365 1q3s d1q3se2 E:212-217,217-222,317-329,348-356,357-365 1q3q d1q3qd2 D:212-217,217-223,317-329,348-356,357-365 1a6e d1a6eb2 B:210-216,216-222,315-327,346-354,355-363 1q3q d1q3qb2 B:212-217,217-223,317-329,348-356,357-365 1q2v d1q2vd2 D:212-217,217-222,317-329,348-356,357-365 1q2v d1q2va2 A:212-217,217-222,317-329,348-356,357-365 1q3r d1q3rc2 C:212-217,217-222,317-329,348-356,357-365 1q3q d1q3qa2 A:212-217,217-222,317-329,348-356,357-365 1q3r d1q3rd2 D:212-217,217-222,317-329,348-356,357-365 1q3q d1q3qc2 C:212-217,217-222,317-329,348-356,357-365 1q2v d1q2vc2 C:212-217,217-222,317-329,348-356,357-365 1a6d d1a6db2 B:210-216,216-222,315-327,346-354,355-363 1a6e d1a6ea2 A:209-215,215-219,314-326,345-353,354-362 1a6d d1a6da2 A:209-215,215-219,314-326,345-353,354-362 1we3 d1we3m2 M:173-179,190-199,280-296,320-326,327-333 1pf9 d1pf9n2 N:174-179,191-198,281-297,321-327,328-334 1mnf d1mnfj2 J:174-179,191-198,281-297,321-327,328-334 1wf4 d1wf4i2 I:173-178,190-199,280-296,320-326,327-333 1pf9 d1pf9j2 J:174-179,191-198,281-297,321-327,328-334 1pf9 d1pf9k2 K:174-179,191-198,281-297,321-327,328-334 1we3 d1we3l2 L:173-178,190-199,280-296,320-326,327-333 1pf9 d1pf9m2 M:174-179,191-198,281-297,321-327,328-334 1mnf d1mnfk2 K:174-179,191-197,281-297,321-327,328-334 1mnf d1mnfc2 C:174-179,191-197,281-297,321-327,328-334 1pcq d1pcqj2 J:174-179,191-197,281-297,321-327,328-334 1we3 d1we3k2 K:173-178,190-199,280-296,320-326,327-333 1pcq d1pcqn2 N:174-179,191-197,281-297,321-327,328-334 1j4z d1j4zk2 K:174-179,191-197,281-297,321-327,328-334 1mnf d1mnfd2 D:174-179,191-197,281-297,321-327,328-334 1mnf d1mnff2 F:174-179,191-197,281-297,321-327,328-334 1mnf d1mnfe2 E:174-179,191-198,281-297,321-327,328-334 1we3 d1we3j2 J:173-178,190-199,280-296,320-326,327-333 1pcq d1pcqm2 M:174-179,191-197,281-297,321-327,328-334 1pf9 d1pf9l2 L:174-179,191-198,281-297,321-327,328-334 1mnf d1mnfa2 A:174-179,191-197,281-297,321-327,328-334 1mnf d1mnfl2 L:174-179,191-198,281-297,321-327,328-334 1mnf d1mnfm2 M:174-179,191-197,281-297,321-327,328-334 1mnf d1mnfi2 I:174-179,191-197,281-297,321-327,328-334 1pcq d1pcqi2 I:174-179,191-197,281-297,321-327,328-334 1kpo d1kpov2 V:174-179,191-197,281-297,321-327,328-334 1mnf d1mnfb2 B:174-179,191-197,281-297,321-327,328-334 1pf9 d1pf9h2 H:174-179,191-198,281-297,321-327,328-334 1j4z d1j4zj2 J:174-179,191-197,281-297,321-327,328-334 1j4z d1j4zd2 D:174-179,191-197,281-297,321-327,328-334 1kpo d1kpou2 U:174-179,191-197,281-297,321-327,328-334 1mnf d1mnfg2 G:174-179,191-197,281-297,321-327,328-334 1pcq d1pcqk2 K:174-179,191-197,281-297,321-327,328-334 1j4z d1j4zl2 L:174-179,191-197,281-297,321-327,328-334 1wf4 d1wf4l2 L:173-178,190-199,280-296,320-326,327-333 1mnf d1mnfn2 N:174-179,191-197,281-297,321-327,328-334 1pf9 d1pf9i2 I:174-179,191-197,281-297,321-327,328-334 1mnf d1mnfh2 H:174-179,191-197,281-297,321-327,328-334 1wf4 d1wf4j2 J:173-178,190-199,280-296,320-326,327-333 1j4z d1j4zi2 I:174-179,191-197,281-297,321-327,328-334 1kpo d1kpow2 W:174-179,191-197,281-297,321-327,328-334 1j4z d1j4zh2 H:174-179,191-197,281-297,321-327,328-334 1kpo d1kpox2 X:174-179,191-197,281-297,321-327,328-334 1j4z d1j4zg2 G:174-179,191-197,281-297,321-327,328-334 1j4z d1j4zb2 B:174-179,191-197,281-297,321-327,328-334 1j4z d1j4ze2 E:174-179,191-197,281-297,321-327,328-334 1wf4 d1wf4n2 N:173-178,190-199,280-296,320-326,327-333 1kpo d1kpo12 1:174-179,191-197,281-297,321-327,328-334 1kp8 d1kp8a2 A:174-179,191-198,281-297,321-327,328-334 1kpo d1kpoq2 Q:174-179,191-197,281-297,321-327,328-334 1kpo d1kpo22 2:174-179,191-197,281-297,321-327,328-334 1pcq d1pcqh2 H:174-179,191-197,281-297,321-327,328-334 1kpo d1kpop2 P:174-179,191-197,281-297,321-327,328-334 1kpo d1kpoz2 Z:174-179,191-197,281-297,321-327,328-334 1kpo d1kpor2 R:174-179,191-197,281-297,321-327,328-334 1kpo d1kpos2 S:174-179,191-197,281-297,321-327,328-334 1kp8 d1kp8m2 M:174-179,191-198,281-297,321-327,328-334 1wf4 d1wf4k2 K:173-178,190-199,280-296,320-326,327-333 1j4z d1j4zm2 M:174-179,191-197,281-297,321-327,328-334 1j4z d1j4zc2 C:174-179,191-197,281-297,321-327,328-334 1j4z d1j4za2 A:174-179,191-197,281-297,321-327,328-334 1kpo d1kpoo2 O:174-179,191-197,281-297,321-327,328-334 1j4z d1j4zf2 F:174-179,191-197,281-297,321-327,328-334 1pcq d1pcql2 L:174-179,191-197,281-297,321-327,328-334 1kpo d1kpot2 T:174-179,191-197,281-297,321-327,328-334 1we3 d1we3n2 N:173-178,190-199,280-296,320-326,327-333 1kp8 d1kp8f2 F:174-179,191-198,281-297,321-327,328-334 1kpo d1kpoy2 Y:174-179,191-197,281-297,321-327,328-334 1aon d1aonn2 N:174-179,191-197,281-297,321-327,328-334 1kp8 d1kp8b2 B:174-179,191-197,281-297,321-327,328-334 1kp8 d1kp8c2 C:174-179,191-197,281-297,321-327,328-334 1kp8 d1kp8h2 H:174-179,191-198,281-297,321-327,328-334 1kp8 d1kp8n2 N:174-179,191-198,281-297,321-327,328-334 1j4z d1j4zn2 N:174-179,191-197,281-297,321-327,328-334 1kp8 d1kp8k2 K:174-179,191-198,281-297,321-327,328-334 1kp8 d1kp8e2 E:174-179,191-197,281-297,321-327,328-334 1kp8 d1kp8i2 I:174-179,191-198,281-297,321-327,328-334 1kp8 d1kp8d2 D:174-179,191-197,281-297,321-327,328-334 1iok d1iokd2 D:174-179,191-198,281-297,321-327,328-334 1iok d1iokf2 F:174-179,191-198,281-297,321-327,328-334 1kp8 d1kp8l2 L:174-179,191-197,281-297,321-327,328-334 1kp8 d1kp8j2 J:174-179,191-197,281-297,321-327,328-334 1iok d1iokg2 G:174-179,191-198,281-297,321-327,328-334 1aon d1aonj2 J:174-179,191-197,280-297,321-327,328-334 1aon d1aonk2 K:174-179,191-197,280-297,321-327,328-334 1iok d1iokc2 C:174-179,191-198,281-297,321-327,328-334 1iok d1iokb2 B:174-179,191-198,281-297,321-327,328-334 1iok d1ioka2 A:174-179,191-198,281-297,321-327,328-334 1iok d1ioke2 E:174-179,191-198,281-297,321-327,328-334 1aon d1aoni2 I:174-179,191-198,281-297,321-327,328-334 1kp8 d1kp8g2 G:174-179,191-197,281-297,321-327,328-334 1aon d1aonh2 H:174-179,191-197,281-297,321-327,328-334 1sjp d1sjpb2 B:171-177,188-195,278-294,318-324,325-331 1aon d1aonm2 M:174-179,191-197,281-297,321-327,328-334 1sjp d1sjpa2 A:171-177,188-195,278-294,318-324,325-331 1aon d1aonl2 L:174-179,191-197,280-297,321-327,328-334 1oel d1oeld2 D:174-180,191-195,281-297,321-326,326-334 1oel d1oelf2 F:174-180,191-195,281-297,321-326,326-334 1oel d1oela2 A:174-180,191-195,281-297,321-326,326-334 1oel d1oelc3 C:174-180,191-195,281-297,321-326,326-334 1oel d1oele2 E:174-180,191-195,281-297,321-326,326-334 1we3 d1we3b2 B:182-191,191-197,280-296,320-326,327-333 1oel d1oelb2 B:174-180,191-195,281-297,321-326,326-334 1oel d1oelg2 G:174-180,191-195,281-297,321-326,326-334 1grl d1grlg2 G:174-180,191-195,281-297,321-326,327-334 1grl d1grlc2 C:174-180,191-195,281-297,321-326,327-334 1grl d1grla2 A:174-180,191-195,281-297,321-326,327-334 1grl d1grlf2 F:174-180,191-195,281-297,321-326,327-334 1grl d1grld2 D:174-180,191-195,281-297,321-326,327-334 1grl d1grlb2 B:174-180,191-195,281-297,321-326,327-334 1grl d1grle2 E:174-180,191-195,281-297,321-326,327-334 4. g.10.1 Hairpin loop containing domain-like the middle part is structurally similar to some knottins and defensins but differs in the disulfide pattern ! Hairpin loop containing domain-like alpha+beta fold with two crossing loops 1gp9 d1gp9a1 A:48-52,59-64,66-77,85-92,93-100 2hgf d2hgfa_ A:47-53,58-64,66-77,85-92,93-100 1gmn d1gmna1 A:48-52,59-64,66-77,85-92,93-100 1bht d1bhta1 A:47-53,58-64,66-77,85-92,93-100 1gmo d1gmoe1 E:47-53,59-64,66-77,85-92,93-100 1gmo d1gmoc1 C:47-53,59-64,66-77,85-92,93-100 1gmo d1gmoa1 A:47-53,59-64,66-77,85-92,93-100 1hky d1hkya_ A:18-22,27-31,33-45,48-54,55-61 2qj2 d2qj2a1 A:47-53,59-64,66-77,85-92,93-100 1gp9 d1gp9d1 D:47-53,59-64,66-77,85-92,93-100 1gp9 d1gp9c1 C:47-53,59-64,66-77,85-92,93-100 1nk1 d1nk1a1 A:47-53,59-64,66-77,85-92,93-100 1gmo d1gmof1 F:47-53,59-64,66-77,85-92,93-100 1gmo d1gmoh1 H:47-53,59-64,66-77,85-92,93-100 1nk1 d1nk1b1 B:47-53,59-64,66-77,85-92,93-100 1gp9 d1gp9b1 B:48-53,59-64,66-77,85-92,93-100 1gmo d1gmob1 B:47-53,59-64,66-77,85-92,93-100 1gmo d1gmod1 D:47-53,59-64,66-77,85-92,93-100 1bht d1bhtb1 B:348-353,359-364,366-377,385-392,393-400 2qj2 d2qj2b1 B:1048-1053,1059-1064,1066-1077,1085-1092,1093-1100 7. b.153.1 PheT/TilS domain contains putative tRNA-binding structural motif ! PheT/TilS domain core: 3 layers; contains beta-sandwich of unusual topology 1jjc d1jjcb6 B:200-205,212-220,243-257,260-265,329-337 1b7y d1b7yb6 B:200-205,212-220,243-257,260-265,329-337 1pys d1pysb6 B:200-205,212-220,243-257,260-265,329-337 2aly d2alyb4 B:200-205,209-220,243-257,260-265,329-339 1eiy d1eiyb6 B:200-205,209-220,243-257,260-265,329-339 2akw d2akwb4 B:200-205,209-220,243-257,260-265,329-339 2amc d2amcb4 B:200-205,209-222,243-257,260-265,329-339 1b70 d1b70b6 B:200-205,209-220,243-257,260-265,329-339 2iy5 d2iy5b4 B:200-205,209-222,243-257,260-265,329-339 19. d.280.1 Sulfolobus fructose-1,6-bisphosphatase-like Sulfolobus fructose-1,6-bisphosphatase-like 4 layers: a/b/b/a; antiparallel beta sheets; similarities to ferredoxin-like fold (scop_cf 54861) in the N-terminal part (1-120) and to the Bacterial S-adenosylmethionine decarboxylase subunit (scop_fa 997656) in the C-terminal part (121-340) 1umg d1umga_ A:111-119,124-133,135-149,210-218,234-241 1umg d1umga_ A:53-62,124-133,135-149,210-218,234-241 33. d.103.1 CytB endotoxin-like CytB endotoxin-like core: beta-alpha(2)-beta-alpha(2)-beta(4); 3 layers: a/b/a 1cby d1cbya_ A:72-76,89-103,106-123,182-197,210-226 1pp6 d1pp6e_ E:4037-4042,4057-4068,4077-4091,4148-4162,4179-4193 1vcy d1vcya_ A:37-42,57-70,74-91,148-162,177-193 1vgf d1vgfa_ A:37-42,57-70,74-91,148-162,177-193 1vgf d1vgfb_ B:1037-1042,1057-1070,1074-1091,1148-1162,1177-1193 1pp0 d1pp0d_ D:3037-3042,3057-3070,3074-3091,3148-3162,3177-3193 1pp0 d1pp0a_ A:37-42,57-70,74-91,148-162,177-193 1pp0 d1pp0b_ B:1037-1042,1057-1070,1074-1091,1148-1162,1177-1193 1pp0 d1pp0c_ C:2037-2042,2057-2070,2074-2091,2148-2162,2177-2193 1pp6 d1pp6a_ A:37-42,57-70,74-91,148-164,177-193 1pp6 d1pp6b_ B:1037-1042,1057-1070,1074-1091,1148-1164,1177-1193 1pp6 d1pp6d_ D:3038-3042,3057-3072,3074-3091,3148-3163,3179-3193