1. c.47.1 Thioredoxin-like
Thioredoxin fold core: 3 layers, a/b/a; mixed beta-sheet of 4 strands, order 4312; strand 3 is antiparallel to the rest
1j08 d1j08a2 A:99-117,135-142,146-167,170-177,194-201
1j08 d1j08h2 H:99-117,135-142,146-167,170-177,194-201
1j08 d1j08d2 D:99-117,135-142,146-167,170-177,194-201
1j08 d1j08e2 E:99-117,135-142,146-167,170-177,194-201
1j08 d1j08c2 C:99-117,135-142,146-167,170-177,194-201
1j08 d1j08f2 F:99-117,135-142,146-167,170-177,194-201
1a8l d1a8la2 A:99-117,135-142,146-167,170-177,194-201
1j08 d1j08b2 B:99-117,135-142,146-167,170-177,194-201
1j08 d1j08g2 G:99-117,135-142,146-167,170-177,194-201
1zyp d1zypb2 B:83-99,118-126,129-147,148-156,172-177
1zyp d1zypa2 A:83-99,118-125,129-147,148-155,172-177
1zyn d1zynb2 B:83-99,118-125,129-147,148-155,172-177
1zyn d1zyna2 A:83-99,118-125,129-147,148-155,172-177
1hyu d1hyua4 A:83-99,118-125,129-147,148-155,172-177
1zma d1zmaa1 A:-2-12,27-34,38-56,59-63,86-93
2es7 d2es7d1 D:7-18,35-43,52-66,70-75,92-100
2es7 d2es7b1 B:7-18,35-43,52-66,70-75,92-100
2es7 d2es7a1 A:7-18,35-43,52-66,70-75,92-100
2es7 d2es7c1 C:7-18,35-43,52-66,70-75,92-100
2. c.36.1 Thiamin diphosphate-binding fold (THDP-binding) there are two different functional modules of this fold: pyridine-binding (Pyr) and pyrophosphate-binding (PP) modules ! two Pyr and two PP modules assemble together in a conserved heterotetrameric core that binds two THDP coenzyme molecules !
Thiamin diphosphate-binding fold (THDP-binding) 3 layers: a/b/a; parallel beta-sheet of 6 strands, order 213465
2c3o d2c3ob2 B:815-829,1035-1041,1045-1060,1061-1069,1097-1102
2c3p d2c3pb2 B:815-829,1035-1041,1045-1060,1061-1069,1097-1102
2uza d2uzab2 B:815-829,1035-1041,1045-1060,1061-1069,1097-1102
2c3m d2c3mb2 B:815-829,1035-1041,1045-1060,1061-1069,1097-1102
2c3y d2c3ya2 A:815-829,1035-1041,1045-1060,1061-1069,1097-1102
2c3y d2c3yb2 B:815-829,1035-1041,1045-1060,1061-1069,1097-1102
1kek d1kekb2 B:815-829,1035-1041,1045-1060,1061-1069,1097-1102
2c3o d2c3oa2 A:815-829,1035-1041,1045-1060,1061-1069,1097-1102
2c3u d2c3ua2 A:815-829,1035-1041,1045-1060,1061-1069,1097-1102
2c42 d2c42b2 B:815-829,1035-1041,1045-1060,1061-1069,1097-1102
1b0p d1b0pb2 B:815-829,1035-1041,1045-1060,1061-1069,1097-1102
2c3p d2c3pa2 A:815-829,1035-1041,1045-1060,1061-1069,1097-1102
2uza d2uzaa2 A:815-829,1035-1041,1045-1060,1061-1069,1097-1102
1b0p d1b0pa2 A:815-829,1035-1041,1045-1060,1061-1069,1097-1102
2c3u d2c3ub2 B:815-829,1035-1041,1045-1060,1061-1069,1097-1102
2c3m d2c3ma2 A:815-829,1035-1041,1045-1060,1061-1069,1097-1102
2c42 d2c42a2 A:815-829,1035-1041,1045-1060,1061-1069,1097-1102
1kek d1keka2 A:815-829,1035-1041,1045-1060,1061-1069,1097-1102
2pda d2pdab2 B:815-829,1035-1041,1045-1060,1061-1069,1097-1102
2pda d2pdaa2 A:815-829,1035-1041,1045-1060,1061-1069,1097-1102
3. d.79.4 PurM N-terminal domain-like
Bacillus chorismate mutase-like core: beta-alpha-beta-alpha-beta(2); mixed beta-sheet: order: 1423, strand 4 is antiparallel to the rest
2hry d2hrya2 A:35-46,435-447,452-471,473-482,492-504
2hs3 d2hs3a2 A:35-46,435-447,452-471,473-482,492-504
2hs4 d2hs4a2 A:35-46,435-447,452-471,473-482,492-504
3d54 d3d54a2 A:35-46,435-447,452-471,473-482,492-503
3d54 d3d54e2 E:35-46,435-447,452-471,473-482,492-503
3d54 d3d54i2 I:35-46,435-447,452-471,473-482,492-503
1cli d1clid1 D:3021-3034,3100-3112,3115-3134,3135-3145,3154-3166
1cli d1clib1 B:1021-1034,1100-1112,1115-1134,1135-1145,1154-1166
1vk3 d1vk3a2 A:35-46,435-447,452-471,473-482,492-504
2hru d2hrua2 A:35-46,435-447,452-471,473-482,492-504
2hs0 d2hs0a2 A:35-45,435-447,452-471,473-482,492-504
1cli d1clic1 C:2015-2027,2100-2112,2115-2134,2135-2145,2154-2166
1cli d1clia1 A:15-27,100-112,115-134,135-145,154-166
1t3t d1t3ta5 A:236-249,733-743,746-769,770-780,798-810
List of motif hits that are not present in SCOP but are found in PDB for pattern ID: 1031 (enumeration index: query969) of S5
2i6r D:0-14,78-88,91-110,111-122,128-140
2i6r B:1-14,78-88,91-110,111-122,128-139
2i6r C:1-14,78-88,91-110,111-122,128-140
2i6r A:0-14,78-88,91-110,111-122,128-140
2z1t A:22-30,84-98,101-120,121-132,138-150
2z1u A:14-30,84-98,101-120,121-132,138-150
3m84 B:17-31,100-112,115-134,135-145,153-166
3m84 A:17-31,100-112,115-134,135-145,153-166
3fhk D:13-24,43-51,53-71,76-83,105-112
3fhk A:13-24,43-51,53-71,76-83,105-112
3fhk E:13-24,43-51,53-72,76-83,105-112
3fhk F:13-24,43-51,53-71,76-82,104-112
2hls B:103-121,139-146,150-171,174-181,198-203
2hls A:103-121,139-146,150-171,174-181,198-203
2qgv H:5-18,35-43,48-66,70-75,92-100
2qgv I:5-18,35-43,48-66,70-75,92-100
2qgv A:5-18,35-43,48-66,70-75,92-100
2qgv B:5-18,35-43,48-66,70-75,92-100
2qgv G:5-18,35-43,48-66,70-75,92-100
2qgv E:5-18,35-43,48-66,70-75,92-100
2qgv C:5-18,35-43,48-66,70-75,92-100
2qgv D:5-18,35-43,48-66,70-75,92-100
2qgv J:5-18,35-43,48-66,70-75,92-100
2qgv F:5-18,35-43,48-66,70-75,92-100
2ywm C:101-119,137-144,148-166,167-174,191-196
2ywm A:101-119,137-144,148-166,167-174,191-196
2ywm B:101-119,137-144,148-166,167-174,191-196
2ywm D:101-119,137-144,148-166,167-174,191-196
3p4e A:18-35,101-113,116-135,136-146,155-167
2ayt B:101-119,137-144,148-166,167-174,191-196
2ayt A:101-119,137-144,148-166,167-174,191-196
2z01 A:17-30,97-108,112-131,132-141,151-163
3apo A:439-454,469-477,480-498,501-507,523-531
2rb9 D:14-28,92-102,105-124,125-136,142-154
2rb9 A:15-28,92-102,105-124,125-136,142-154
2rb9 C:15-28,92-102,105-124,125-136,142-154
2rb9 B:15-28,92-102,105-124,125-136,142-154
2btu A:13-30,97-109,112-131,132-142,151-163
2btu B:12-30,97-109,112-131,132-142,151-162
3ira A:10-19,40-47,50-64,74-81,105-112
3ac6 A:44-54,478-490,494-516,517-527,537-549
3qty B:18-31,100-112,115-134,135-145,153-166
3qty A:15-31,100-112,115-134,135-145,153-166