Seq2Ref
The web server to facilitate functional annotation
Wenlin Li, Qian Cong, Lisa N. Kinch, Nick V. Grishin
Howard Hughes Medical Institute, University of Texas Southwestern Medical Center
Department of Biochemistry and Department of Biophysics, University of Texas Southwestern Medical Center
Outline:
- Abstract: how to find your 'best friends'
- Introduction: how the problem comes
- Methods: find ways out
- Results: take a look at the server!
- Examples: how it helps!
- Benchmark: seems good!
Abstract:
Introduction:
- Intro1: Motivation
- Intro2: Misannotation
- Intro3: Problems
Intro1: MOTIVATION
Intro2: MISANNOTATION
Intro3: PROBLEMS
Multidomain problem
Intro3: PROBLEMS
Misannotation propagation
Methods:
RB: Riciprocal Best Hit
MSC: Mutliple Sequence Comparison
Rating system
Seq2Ref server:
Example 1
Example 1
Example 2
Example 2
Benchmark:
Run on enolase superfamily 
(7 subgroups/20 families)
